# terms

id: GO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of cyclin-dependent protein kinase 5 activator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase 5 activator regulator activity (obsolete GO:0016536)","synonyms":[{"name":"cyclin-dependent protein kinase 5 activator regulator activity","type":"exact"},{"name":"cyclin-dependent protein kinase 5 activator, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016536"}


id: MONDO:0032584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 14, hair/tooth type with or without hypohidrosis","secondary_identifiers":["UMLS:C4748560","OMIM:618180","DOID:0111662","MEDGEN:1648329"],"synonyms":[{"name":"ECTD14","type":"related"},{"name":"ECTODERMAL DYSPLASIA 14, HAIR/TOOTH TYPE WITH OR WITHOUT HYPOHIDROSIS","type":"related"}],"termid":"MONDO:0032584","xrefs":{"Monarch":{"xref_id":"0032584"}}}


id: FYPO:0006263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K36 trimethylation during vegetative growth","synonyms":[{"name":"increased histone H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K36 trimethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K36me3 during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K36 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006263"}


id: PBO:0087529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex; conserved region at N-terminus is essential for interaction with the NPC (nucleosome core particle); required for autophagy; homologous to Drosophila Enhancer of Polycomb; coding sequence contains length polymorphisms in different strains","termid":"PBO:0087529"}


id: PBO:0064299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 2","termid":"PBO:0064299"}


id: MONDO:0958354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetic central precocious puberty in female","secondary_identifiers":["MEDGEN:1853156","Orphanet:650077","UMLS:C5816765"],"termid":"MONDO:0958354","xrefs":{"Monarch":{"xref_id":"0958354"}}}


id: PBO:0004835
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.6","termid":"PBO:0004835"}


id: MONDO:0045010
data:
  {"annotated_genes":["SJAG_03056","SJAG_02783","SJAG_03774","SJAG_01209","SJAG_03227","SJAG_04697","SJAG_01491","SJAG_02648","SJAG_00437","SJAG_00924","SJAG_04952","SJAG_00334","SJAG_01950","SJAG_04053","SJAG_01069","SJAG_04363","SJAG_00747","SJAG_03656","SJAG_03188","SJAG_02102","SJAG_04316","SJAG_04127","SJAG_04096","SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012052"},{"annotations":[87413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013349"},{"annotations":[86109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011783"},{"annotations":[87229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011933"},{"annotations":[86864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010998"},{"annotations":[85599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011291"},{"annotations":[85438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011969"},{"annotations":[86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012117"},{"annotations":[86180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87027,87026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800044"},{"annotations":[85774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"},{"annotations":[86787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013789"},{"annotations":[87242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010472"},{"annotations":[85407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011964"},{"annotations":[87609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009890"},{"annotations":[86946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011629"},{"annotations":[86689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[86215,86213,86214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[87020,87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[87025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[86306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[87024,87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"},{"annotations":[87553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"},{"annotations":[85385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008907"},{"annotations":[86670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012783"},{"annotations":[86019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014270"},{"annotations":[86022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014271"},{"annotations":[86515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013870"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of glycoprotein metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01069":null,"SJAG_01209":null,"SJAG_01491":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03056":null,"SJAG_03188":null,"SJAG_03227":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03774":null,"SJAG_04053":null,"SJAG_04096":null,"SJAG_04127":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04697":null,"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"glycoprotein metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:575248","UMLS:C0342844","SCTID:238045003"],"synonyms":[{"name":"disorder of glycoprotein metabolic process","type":"exact"},{"name":"disorder of glycoprotein metabolism","type":"exact"},{"name":"glycoprotein metabolic process disease","type":"exact"},{"name":"glycoprotein metabolism disease","type":"exact"}],"termid":"MONDO:0045010","terms_by_termid":{"MONDO:0008907":null,"MONDO:0009364":null,"MONDO:0009890":null,"MONDO:0010472":null,"MONDO:0010998":null,"MONDO:0011257":null,"MONDO:0011291":null,"MONDO:0011629":null,"MONDO:0011783":null,"MONDO:0011933":null,"MONDO:0011964":null,"MONDO:0011969":null,"MONDO:0012052":null,"MONDO:0012117":null,"MONDO:0012248":null,"MONDO:0012783":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0013349":null,"MONDO:0013789":null,"MONDO:0013870":null,"MONDO:0013968":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014248":null,"MONDO:0014270":null,"MONDO:0014271":null,"MONDO:0014543":null,"MONDO:0800044":null},"xrefs":{"Monarch":{"xref_id":"0045010"}}}


id: PBO:0041696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 2","termid":"PBO:0041696"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: GO:0006774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin B12 reduction (obsolete GO:0006774)","synonyms":[{"name":"vitamin B12 reduction","type":"exact"}],"termid":"GO:0006774"}


id: MONDO:0008279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial adenomatous polyposis type 1 (obsolete MONDO:0008279)","termid":"MONDO:0008279","xrefs":{"Monarch":{"xref_id":"0008279"}}}


id: PR:Q9US46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase RNF14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase itt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.14","secondary_identifiers":["UniProtKB:Q9US46"],"synonyms":[{"name":"RING finger protein itt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNF14","type":"exact"}],"termid":"PR:Q9US46"}


id: PBO:0080418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 2","termid":"PBO:0080418"}


id: GO:0097308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["GOC:di","PMID:11425711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to farnesol","termid":"GO:0097307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to farnesol","termid":"GO:0097308"}


id: PBO:0072324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 10","termid":"PBO:0072324"}


id: PBO:0073239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 3","termid":"PBO:0073239"}


id: PBO:0063927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3R5 divergent transcript","termid":"PBO:0063927"}


id: PBO:0002503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp3 (predicted)","termid":"PBO:0002503"}


id: PBO:0041486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C11orf98 pseudogene 1","termid":"PBO:0041486"}


id: PBO:0073752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 7","termid":"PBO:0073752"}


id: MONDO:0859342
data:
  {"annotated_genes":["SJAG_04699","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85969,85970],"is_not":false,"summary":null,"term":"MONDO:0859342"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 30, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620183","MEDGEN:1824053","UMLS:C5774280"],"termid":"MONDO:0859342","terms_by_termid":{"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0859342"}}}


id: MONDO:0023201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fryns Smeets Thiry syndrome","secondary_identifiers":["Orphanet:2058","MEDGEN:1803270","UMLS:C5680810","GARD:2409"],"termid":"MONDO:0023201","xrefs":{"Monarch":{"xref_id":"0023201"}}}


id: PBO:0049014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPM6A divergent transcript","termid":"PBO:0049014"}


id: MONDO:0013786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the C8orf37 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 16","secondary_identifiers":["MEDGEN:482675","OMIM:614500","DOID:0111022","UMLS:C3281045","GARD:15812"],"synonyms":[{"name":"C8orf37 cone-rod dystrophy","type":"exact"},{"name":"CORD16","type":"exact"},{"name":"cone-rod dystrophy 16","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in C8orf37","type":"exact"},{"name":"cone-rod dystrophy type 16","type":"exact"},{"name":"retinal dystrophy with early macular involvement","type":"exact"},{"name":"retinitis pigmentosa 64","type":"related"}],"termid":"MONDO:0013786","xrefs":{"Monarch":{"xref_id":"0013786"}}}


id: MONDO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-thalassemia (BT) is characterized by deficiency (Beta+) or absence (Beta0) of synthesis of the beta globin chains of hemoglobin (Hb).","definition_xrefs":["Orphanet:848"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"thalassemia","termid":"MONDO:0000984"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"beta thalassemia","secondary_identifiers":["NANDO:2201274","icd11.foundation:2063292324","MESH:D017086","MEDGEN:2611","ICD9:282.49","MedDRA:10043391","GARD:871","NORD:1765","UMLS:C0005283","ICD9:282.44","DOID:12241","NCIT:C34375","SCTID:65959000"],"synonyms":[{"name":"Beta thalassemia intermedia","type":"related"},{"name":"Beta thalassemia minor","type":"related"},{"name":"Thalassemias, beta-","type":"related"},{"name":"erythroblastic anaemia","type":"related"},{"name":"erythroblastic anemia","type":"related"},{"name":"thalassemia major","type":"related"},{"name":"thalassemia, Hispanic gamma-delta-beta","type":"related"}],"termid":"MONDO:0019402","xrefs":{"Monarch":{"xref_id":"0019402"}}}


id: PBO:0043073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 2 subunit","termid":"PBO:0043073"}


id: FYPO:0004099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic chromosome condensation","synonyms":[{"name":"normal chromosome condensation during mitotic cell cycle","type":"related"},{"name":"normal mitotic chromosome condensation during vegetative growth","type":"exact"}],"termid":"FYPO:0004099"}


id: FYPO:0000424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis begins later than normal. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of endocytosis during vegetative growth","synonyms":[{"name":"delayed endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of endocytosis during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: delayed during vegetative growth","type":"related"}],"termid":"FYPO:0000424"}


id: PR:000027720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase complex in Schizosaccharomyces pombe that is composed of two small (suc22) subunits and two large (cdc22) subunits.","definition_xrefs":["PMID:20516199","PRO:CNA","PMID:8479429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase complex (Schizosaccharomyces pombe)","synonyms":[{"name":"fission yeast RNR","type":"exact"},{"name":"fission yeast ribonucleotide reductase complex","type":"exact"}],"termid":"PR:000027720"}


id: GO:0030806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide catabolic process (obsolete GO:0030806)","synonyms":[{"name":"down regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"downregulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"inhibition of cyclic nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"negative regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030806"}


id: GO:0003091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Renal process involved in the maintenance of an internal steady state of water in the body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"multicellular organismal-level water homeostasis","termid":"GO:0050891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal water homeostasis","secondary_identifiers":["Reactome:R-HSA-432040"],"synonyms":[{"name":"water homeostasis by the renal system","type":"exact"}],"termid":"GO:0003091"}


id: MONDO:0004292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic, slow growing, well differentiated and non-metastasizing squamous cell carcinoma with pushing margins that arises from the supraglottic area of the larynx.","definition_xrefs":["NCIT:C8191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx verrucous carcinoma","termid":"MONDO:0002766"},{"relation_name":"is_a","term_name":"supraglottis squamous cell carcinoma","termid":"MONDO:0004293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis verrucous carcinoma","secondary_identifiers":["DOID:7586","UMLS:C0280331","MEDGEN:76098"],"synonyms":[{"name":"supraglottic part of larynx verrucous carcinoma","type":"exact"},{"name":"supraglottic verrucous carcinoma","type":"exact"},{"name":"supraglottis verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of supraglottis","type":"exact"},{"name":"verrucous carcinoma of the supraglottis","type":"exact"}],"termid":"MONDO:0004292","xrefs":{"Monarch":{"xref_id":"0004292"}}}


id: PBO:0088388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC), ubiquitin conjugating enzyme E2 subunit Rhp6/Rad6","termid":"PBO:0088388"}


id: PATO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Branchiness quality inhering in a bearer by virtue of decreasing the degree to which there are subdivisions or offshoots in a bearer entity.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased branchiness","termid":"PATO:0002286"}


id: GO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + all-trans-retinyl ester = 11-cis-retinol + fatty acid.","definition_xrefs":["RHEA:31771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","secondary_identifiers":["KEGG_REACTION:R08388","MetaCyc:RXN-12550"],"synonyms":[{"name":"all-trans-retinol isomerase:hydrolase activity","type":"broad"},{"name":"all-trans-retinyl ester acylhydrolase, 11-cis retinol forming activity","type":"related"},{"name":"all-trans-retinylester 11-cis isomerohydrolase activity","type":"related"},{"name":"retinoid isomerohydrolase activity","type":"broad"},{"name":"retinol isomerase activity","type":"broad"}],"termid":"GO:0052885"}


id: PBO:0079762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-fold modifier conjugating enzyme 1","termid":"PBO:0079762"}


id: PBO:0016955
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marinesco-Sjogren syndrome","termid":"PBO:0016955"}


id: GO:0035975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["UniPathway:UPA00996","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl phosphate catabolic process (obsolete GO:0035975)","synonyms":[{"name":"carbamoyl phosphate breakdown","type":"exact"},{"name":"carbamoyl phosphate catabolism","type":"exact"},{"name":"carbamoyl phosphate degradation","type":"exact"}],"termid":"GO:0035975"}


id: PBO:0083923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose-1,6-bisphosphatase; key regulatory enzyme in the gluconeogenesis pathway, required for glucose metabolism; undergoes either proteasome-mediated or autophagy-mediated degradation depending on growth conditions; glucose starvation results in redistribution to the periplasm; interacts with Vid30p","termid":"PBO:0083923"}


id: PBO:0059926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 12","termid":"PBO:0059926"}


id: MONDO:0019956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process affecting the brain parenchyma. Causes include viral infections and less frequently bacterial infections, toxins, and immune-mediated processes.","definition_xrefs":["NCIT:C26760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis","secondary_identifiers":["DOID:9588","UMLS:C0014038","MedDRA:10014581","ICD9:323.0","ICD9:323.8","Orphanet:97275","ICD10CM:A85","MEDGEN:4027","MESH:D004660","ICD9:323.9","SCTID:45170000"],"synonyms":[{"name":"brain inflammation","type":"broad"}],"termid":"MONDO:0019956","xrefs":{"Monarch":{"xref_id":"0019956"}}}


id: GO:0017087
data:
  {"annotated_genes":["SJAG_04641","SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105952,113576],"is_not":false,"summary":null,"term":"GO:0017087"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of a regulatory subunit (alpha-MPP) and a catalytic subunit (beta-MPP) that catalyzes the release of N-terminal targeting peptides from precursor proteins imported into the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02397":null,"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial processing peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017087","terms_by_termid":{"GO:0017087":null}}


id: PATO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's independence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic","termid":"PATO:0001456"}


id: PBO:0036353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation release factor class I eRF1","termid":"PBO:0036353"}


id: MONDO:0958162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B lymphoblastic leukemia/lymphoma that is associated with DUX4 gene rearrangement.","definition_xrefs":["DOID:0081412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with DUX4 rearrangement","secondary_identifiers":["UMLS:C5855478","NCIT:C199232","MEDGEN:1848969"],"termid":"MONDO:0958162","xrefs":{"Monarch":{"xref_id":"0958162"}}}


id: PBO:0065803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1B, member RAS oncogene family","termid":"PBO:0065803"}


id: PBO:0003885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp1","termid":"PBO:0003885"}


id: PBO:0040635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARX1 divergent transcript","termid":"PBO:0040635"}


id: MONDO:1011863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute necrotising encephalopathy of Leigh, non-human animal","secondary_identifiers":["OMIA:001097"],"termid":"MONDO:1011863","xrefs":{"Monarch":{"xref_id":"1011863"}}}


id: GO:0097378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A dorsal spinal cord interneuron is an interneuron located in the dorsal part of the spinal cord.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord interneuron axon guidance","termid":"GO:0097377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal spinal cord interneuron axon guidance","synonyms":[{"name":"dorsal interneuron axon guidance","type":"exact"}],"termid":"GO:0097378"}


id: PBO:0029295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G0_to_G1_transition","termid":"PBO:0029295"}


id: GO:0046808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Antigenically dense structures located at the periphery of nuclei, close to but not abutting nuclear membranes. Assemblons contain the proteins for immature-capsid assembly; they are located at the periphery of a diffuse structure composed of proteins involved in DNA synthesis, which overlaps only minimally with the assemblons. More than one site can be present simultaneously.","definition_xrefs":["PMID:8676489"],"gene_count":0,"genotype_count":0,"name":"obsolete assemblon (obsolete GO:0046808)","termid":"GO:0046808"}


id: MONDO:1010820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, goat","secondary_identifiers":["OMIA:000810-9925"],"termid":"MONDO:1010820","xrefs":{"Monarch":{"xref_id":"1010820"}}}


id: GO:0047928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + gibberellin = UDP + gibberellin 2-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.176","MetaCyc:GIBBERELLIN-BETA-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"gibberellin beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:20025"],"synonyms":[{"name":"UDP-glucose:gibberellin 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:gibberellin 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"gibberellin b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-gibberellate 3-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-gibberellate 7-glucosyltransferase activity","type":"related"}],"termid":"GO:0047928"}


id: MONDO:0030897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lessel-Kreienkamp syndrome","secondary_identifiers":["OMIM:619149","UMLS:C5436892","MEDGEN:1762595","GARD:18538"],"synonyms":[{"name":"LESKRES","type":"exact"}],"termid":"MONDO:0030897","xrefs":{"Monarch":{"xref_id":"0030897"}}}


id: PBO:0003976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol metabolism protein Opi10 (predicted)","termid":"PBO:0003976"}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_00244","SJAG_01154","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89077,105574,115450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[89078,105575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855198","Reactome:R-HSA-2023971"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: PBO:0046548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 2","termid":"PBO:0046548"}


id: GO:0051467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a steroid hormone stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of steroid hormone stimulus","termid":"GO:0051467"}


id: GO:1990817
data:
  {"annotated_genes":["SJAG_03257","SJAG_02383","SJAG_02725","SJAG_01176","SJAG_00797","SJAG_02720","SJAG_02370","SJAG_04946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59228,64146,69318,69453,76742,78579,79365,96613],"is_not":false,"summary":null,"term":"GO:1990817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n)-3'-adenine ribonucleotide. The primer may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["PMID:13965521","RHEA:11332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_03257":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"poly(A) RNA polymerase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9833031","EC:2.7.7.19","Reactome:R-HSA-72185","MetaCyc:POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN"],"synonyms":[{"name":"NTP polymerase activity","type":"broad"},{"name":"RNA adenylating enzyme","type":"exact"},{"name":"RNA adenyltransferase activity","type":"exact"},{"name":"RNA adenylyltransferase activity","type":"exact"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"GO:1990817","terms_by_termid":{"GO:1990817":null}}


id: PBO:0072463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 27","termid":"PBO:0072463"}


id: PBO:0048296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigaxonin","termid":"PBO:0048296"}


id: GO:0007263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of nitric oxide, detection by receptors/sensors for nitric oxide (such as soluble guanylyl cyclase/sGC) and ends with the activation of downstream effectors that further transmit the signal within the cell. Nitric oxide transmits its downstream effects through either cyclic GMP (cGMP)-dependent or independent mechanisms.","definition_xrefs":["PMID:21549190","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nitric oxide mediated signal transduction","synonyms":[{"name":"NO mediated signal transduction","type":"exact"},{"name":"NO-mediated signal transduction","type":"exact"},{"name":"nitric oxide signaling","type":"exact"},{"name":"nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0007263"}


id: MONDO:0019822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arterial duct anomaly (obsolete MONDO:0019822)","secondary_identifiers":["Orphanet:95485"],"synonyms":[{"name":"patent ductus arteriosus anomalies","type":"exact"}],"termid":"MONDO:0019822","xrefs":{"Monarch":{"xref_id":"0019822"}}}


id: MONDO:0700013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 6 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 disorder","termid":"MONDO:0700013","xrefs":{"Monarch":{"xref_id":"0700013"}}}


id: GO:0060535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage in the trachea are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage morphogenesis","termid":"GO:0060536"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"},{"relation_name":"part_of","term_name":"trachea cartilage development","termid":"GO:0060534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea cartilage morphogenesis","termid":"GO:0060535"}


id: MONDO:0016633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombotic disorder due to a constitutional coagulation factors defect (obsolete MONDO:0016633)","secondary_identifiers":["Orphanet:248361"],"termid":"MONDO:0016633","xrefs":{"Monarch":{"xref_id":"0016633"}}}


id: GO:0009326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the dehydrogenation of formate to produce carbon dioxide (CO2).","definition_xrefs":["PMID:8566699","PMID:1504073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"formate dehydrogenase complex","termid":"GO:0009326"}


id: PBO:0085919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085919"}


id: PBO:0051747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 13","termid":"PBO:0051747"}


id: GO:0085022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VI secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type VI secretion system (obsolete GO:0085022)","termid":"GO:0085022"}


id: PBO:0111535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrg1","termid":"PBO:0111535"}


id: PBO:0042570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein","termid":"PBO:0042570"}


id: PBO:0053920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1217","termid":"PBO:0053920"}


id: GO:0160233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of valine.","definition_xrefs":["PMID:39567688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0003674"],"is_obsolete":false,"name":"valine sensor activity","termid":"GO:0160233"}


id: GO:0023040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via ionic flux.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via ionic flux (obsolete GO:0023040)","synonyms":[{"name":"signaling via ionic flux","type":"exact"},{"name":"signalling via ionic flux","type":"exact"}],"termid":"GO:0023040"}


id: GO:0110095
data:
  {"annotated_genes":["SJAG_05256","SJAG_01457","SJAG_02960","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113123],"is_not":false,"summary":null,"term":"GO:0110095"},{"annotations":[105420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[78512,95895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of an aldehyde. These may include transport of aldehydes away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["PMID:25656103","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to aldehyde","termid":"GO:0110096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_02010":null,"SJAG_02960":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of aldehyde","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110095","terms_by_termid":{"GO:0046294":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0042609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 9","termid":"PBO:0042609"}


id: PBO:0048911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member F","termid":"PBO:0048911"}


id: PR:000050516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the ssp2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC74.03c","termid":"PR:000050516"}


id: MONDO:0010433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 15","secondary_identifiers":["UMLS:C2749008","OMIM:300809","MEDGEN:440686"],"synonyms":[{"name":"SLEB15","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 15","type":"exact"}],"termid":"MONDO:0010433","xrefs":{"Monarch":{"xref_id":"0010433"}}}


id: MONDO:0033542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 70","secondary_identifiers":["MEDGEN:1740270","OMIM:618969","UMLS:C5436501","DOID:0112005"],"synonyms":[{"name":"IMD70","type":"related"},{"name":"IMMUNODEFICIENCY 70","type":"related"}],"termid":"MONDO:0033542","xrefs":{"Monarch":{"xref_id":"0033542"}}}


id: PR:Q9P7D5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.14c gene.","definition_xrefs":["UniProtKB:Q9P7D5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P4H10.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.14c","synonyms":[{"name":"Spom972h-SPBP4H10.14c","type":"exact"}],"termid":"PR:Q9P7D5"}


id: GO:0031868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostaglandin F2-alpha receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"prostaglandin F2-alpha receptor binding","synonyms":[{"name":"prostaglandin F2-alpha receptor ligand","type":"narrow"},{"name":"prostanoid FP receptor binding","type":"exact"}],"termid":"GO:0031868"}


id: MONDO:0002175
data:
  {"annotated_genes":["SJAG_03258","SJAG_00737"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87646,87647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012419"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"degeneration of macula and posterior pole","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:362.5","SCTID:267611002","UMLS:C0339436","MEDGEN:573150","DOID:2007","ICD10CM:H35.3"],"synonyms":[{"name":"degeneration of macula and posterior pole of retina","type":"exact"},{"name":"degeneration of macula or posterior pole","type":"exact"}],"termid":"MONDO:0002175","terms_by_termid":{"MONDO:0012419":null},"xrefs":{"Monarch":{"xref_id":"0002175"}}}


id: MONDO:0013199
data:
  {"annotated_genes":["SJAG_00289","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86824,86825],"is_not":false,"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"Tuberous sclerosis mapped to chromosome 16p13.3 (TSC2 gene).","definition_xrefs":["NCIT:C75331"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","termid":"MONDO:0019341"},{"relation_name":"is_a","term_name":"tuberous sclerosis","termid":"MONDO:0001734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:348170","OMIM:613254","MESH:C566021","GARD:15640","DOID:0080325","UMLS:C1860707"],"synonyms":[{"name":"TSC2","type":"related"},{"name":"TSC2 Angiomyolipomas, renal, modifier of","type":"related"},{"name":"tuberous sclerosis 2","type":"exact"},{"name":"tuberous sclerosis type 2","type":"exact"},{"name":"tuberous sclerosis, type 2","type":"related"},{"name":"tuberous sclerosis-2","type":"exact"}],"termid":"MONDO:0013199","terms_by_termid":{"MONDO:0013199":null},"xrefs":{"Monarch":{"xref_id":"0013199"}}}


id: PBO:0057703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1290","termid":"PBO:0057703"}


id: PBO:0049994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 1","termid":"PBO:0049994"}


id: PBO:0063706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 1","termid":"PBO:0063706"}


id: MONDO:0011858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, ataxia, and intellectual disability","secondary_identifiers":["MESH:C564378","MEDGEN:336010","UMLS:C1843661","OMIM:607565"],"synonyms":[{"name":"Spar","type":"related"},{"name":"spastic paraplegia, ataxia, and intellectual disability","type":"exact"},{"name":"spastic paraplegia, ataxia, and mental retardation","type":"exact"}],"termid":"MONDO:0011858","xrefs":{"Monarch":{"xref_id":"0011858"}}}


id: MONDO:0971015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 4","secondary_identifiers":["MEDGEN:347176","OMIM:620817","UMLS:C1859537"],"termid":"MONDO:0971015","xrefs":{"Monarch":{"xref_id":"0971015"}}}


id: GO:1902410
data:
  {"annotated_genes":["SJAG_03631","SJAG_02592","SJAG_04930","SJAG_03596","SJAG_02700","SJAG_04776","SJAG_00279","SJAG_03045","SJAG_00228","SJAG_01943","SJAG_04498","SJAG_00845","SJAG_01114","SJAG_03379","SJAG_00082","SJAG_04982","SJAG_04077","SJAG_04597","SJAG_02392","SJAG_04468","SJAG_01732","SJAG_05285","SJAG_01787","SJAG_03342","SJAG_00268","SJAG_05179","SJAG_01143","SJAG_01889","SJAG_03936","SJAG_00442","SJAG_04887","SJAG_04703","SJAG_02380","SJAG_02215","SJAG_02222","SJAG_02838","SJAG_00807","SJAG_03581","SJAG_04666","SJAG_01453","SJAG_01894","SJAG_02431","SJAG_05290","SJAG_02831","SJAG_00700","SJAG_03123","SJAG_03703","SJAG_03025","SJAG_02916","SJAG_00514","SJAG_03915","SJAG_04358","SJAG_03048","SJAG_03309","SJAG_04690","SJAG_01215","SJAG_00256","SJAG_01805","SJAG_01665","SJAG_01188","SJAG_03704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100126,91652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"},{"annotations":[72931,75958,92902,95651,98083,102783,119946,112696,92951,98279,75307,112256,98008,118857,111185,99257,88611,76719,102927,118270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[102784,98389,98009,101064,88612,118271,112697,101292,99258,95652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[109237,96683,119709,88624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[105032,106500,108994,113464,80788,99647,103006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[102728],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[104061],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[102733],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[90354,94772],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[110908,94942,94773,113752,87885],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[119710,111151,91126,104066],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[107420,113753,78284,94165,118283,90226,105554,115863,92779,106760],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[87886,94776,92780],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[114774,106484],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031671"},{"annotations":[119951,94171],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[111764,88202,101753],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[116210],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"Any cytokinetic process that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic 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cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:1902410","terms_by_termid":{"GO:0031671":null,"GO:0061796":null,"GO:0120306":null,"GO:0140278":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PBO:0056620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trans-2-enoyl-CoA reductase","termid":"PBO:0056620"}


id: FYPO:0000959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium dodecyl sulfate (SDS.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on sodium dodecyl sulfate","synonyms":[{"name":"normal cell population growth in presence of sodium dodecyl sulfate","type":"exact"},{"name":"normal cell population growth on SDS","type":"exact"},{"name":"normal cell population growth on sodium dodecyl sulfate","type":"exact"},{"name":"normal cellular response to sodium dodecyl sulfate","type":"related"},{"name":"normal growth on sodium dodecyl sulphate","type":"exact"},{"name":"normal vegetative cell population growth on sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0000959"}


id: PBO:0053120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 10","termid":"PBO:0053120"}


id: GO:0007503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fat body over time, from its formation to the mature structure. A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat body development","termid":"GO:0007503"}


id: GO:0006090
data:
  {"annotated_genes":["SJAG_02369","SJAG_04495","SJAG_00027","SJAG_02009","SJAG_03660","SJAG_02176","SJAG_04334","SJAG_03828","SJAG_00866","SJAG_04192","SJAG_01310","SJAG_04048","SJAG_02796","SJAG_00605","SJAG_02135","SJAG_00461","SJAG_03310","SJAG_02945","SJAG_02107","SJAG_03290","SJAG_00464","SJAG_03903","SJAG_05314","SJAG_03373","SJAG_06621","SJAG_02158","SJAG_02785","SJAG_00685","SJAG_06622","SJAG_00839","SJAG_03671","SJAG_02006","SJAG_03064","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73403,73581],"is_not":false,"summary":null,"term":"GO:0006090"},{"annotations":[98622,103750,105827,105828,106199,105829,98352,109770,109771,109772,109773,109775,116741,94886,104006,95380,109776,78220,109774,106198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[114323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[73430,76393],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[87777,79422,73138,73768,88206,75000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[70471],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[75484],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00464":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02158":null,"SJAG_02176":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03671":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P41-PWY","Wikipedia:Pyruvic_acid","GO:0006087","Reactome:R-HSA-70268"],"synonyms":[{"name":"pyruvate dehydrogenase bypass","type":"related"},{"name":"pyruvate metabolism","type":"exact"}],"termid":"GO:0006090","terms_by_termid":{"GO:0006086":null,"GO:0006090":null,"GO:0006110":null,"GO:0010510":null,"GO:0019450":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: MONDO:0032835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, nishimura type","secondary_identifiers":["UMLS:C4305147","DOID:0112288","MEDGEN:930816","OMIM:618618","icd11.foundation:523290419"],"synonyms":[{"name":"SEDN","type":"related"},{"name":"SPONDYLOEPIPHYSEAL DYSPLASIA, NISHIMURA TYPE","type":"related"}],"termid":"MONDO:0032835","xrefs":{"Monarch":{"xref_id":"0032835"}}}


id: PBO:0071750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 6","termid":"PBO:0071750"}


id: PBO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Mue16","termid":"PBO:0007592"}


id: MONDO:0020659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete upper tract urothelial carcinoma (obsolete MONDO:0020659)","secondary_identifiers":["GARD:9376"],"termid":"MONDO:0020659","xrefs":{"Monarch":{"xref_id":"0020659"}}}


id: PBO:0048551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 1","termid":"PBO:0048551"}


id: PBO:0038616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin converting enzyme 2","termid":"PBO:0038616"}


id: FYPO:0006538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid during a cellular response to a pheromone. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"spheroid cell during cellular response to pheromone","synonyms":[{"name":"cell morphology, round cells during cellular response to pheromone","type":"related"},{"name":"cell morphology, rounded cells during cellular response to pheromone","type":"related"},{"name":"rounded cell during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006538"}


id: GO:0071582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of zinc ion transport","termid":"GO:0071579"},{"relation_name":"negatively_regulates","term_name":"zinc ion transport","termid":"GO:0006829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of zinc ion transport","termid":"GO:0071582"}


id: GO:0008940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + acceptor = nitrate + reduced acceptor.","definition_xrefs":["RHEA:21068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitrate reductase activity","synonyms":[{"name":"nitrate reductase (acceptor)","type":"related"},{"name":"nitrite:(acceptor) oxidoreductase","type":"related"},{"name":"nitrite:acceptor oxidoreductase","type":"related"},{"name":"respiratory nitrate reductase activity","type":"narrow"}],"termid":"GO:0008940"}


id: PBO:0088564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh2","termid":"PBO:0088564"}


id: MONDO:0012691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a mutation in the RAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"LEOPARD syndrome 2","secondary_identifiers":["DOID:0080549","GARD:15518","OMIM:611554","UMLS:C1969056","MESH:C537117","MEDGEN:370588"],"synonyms":[{"name":"LEOPARD syndrome 2","type":"exact"},{"name":"LPRD2","type":"related"},{"name":"Leopard syndrome type 2","type":"exact"},{"name":"leopard syndrome 2","type":"exact"}],"termid":"MONDO:0012691","xrefs":{"Monarch":{"xref_id":"0012691"}}}


id: MONDO:0013240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the INS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0004335","MONDO:0019254","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 10","secondary_identifiers":["SCTID:609577006","OMIM:613370","UMLS:C3150617","GARD:15652","DOID:0111108","MEDGEN:461967"],"synonyms":[{"name":"INS maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY10","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in INS","type":"exact"},{"name":"maturity-onset diabetes of the young, type 10","type":"related"}],"termid":"MONDO:0013240","xrefs":{"Monarch":{"xref_id":"0013240"}}}


id: GO:0141041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of the extracellular matrix of another organism.","definition_xrefs":["PMID:2817904"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of extracellular matrix of another organism (obsolete GO:0141041)","termid":"GO:0141041"}


id: GO:0009452
data:
  {"annotated_genes":["SJAG_04488","SJAG_04034","SJAG_01724","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108067,69056,75907,72558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[59801],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the RNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["PMID:9266685","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine RNA capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA capping","type":"broad"},{"name":"m(7)G RNA capping","type":"exact"}],"termid":"GO:0009452","terms_by_termid":{"GO:0006370":null,"GO:0106005":null}}


id: PR:Q1K9C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9C2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.01c","synonyms":[{"name":"Spom972h-sir1","type":"exact"}],"termid":"PR:Q1K9C2"}


id: GO:1905544
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93693],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of L-methionine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17556368","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"methionine import across plasma membrane","termid":"GO:1903692"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903813"],"synonyms":[{"name":"L-methionine import into cell","type":"exact"}],"termid":"GO:1905544","terms_by_termid":{"GO:1905626":null}}


id: PBO:0031739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mating_type_switching","termid":"PBO:0031739"}


id: GO:1903331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron-sulfur cluster assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"positively_regulates","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of iron-sulfur cluster assembly","synonyms":[{"name":"activation of iron-sulfur cluster assembly","type":"narrow"},{"name":"activation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"activation of iron-sulphur cluster assembly","type":"narrow"},{"name":"positive regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"positive regulation of iron-sulphur cluster assembly","type":"exact"},{"name":"up regulation of iron-sulfur cluster assembly","type":"exact"},{"name":"up regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"up regulation of iron-sulphur cluster assembly","type":"exact"},{"name":"up-regulation of iron-sulfur cluster assembly","type":"exact"},{"name":"up-regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"up-regulation of iron-sulphur cluster assembly","type":"exact"},{"name":"upregulation of iron-sulfur cluster assembly","type":"exact"},{"name":"upregulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"upregulation of iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:1903331"}


id: GO:0008625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with a ligand binding to a death domain receptor on the cell surface, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"induction of apoptosis via death domain receptors","type":"related"},{"name":"induction of apoptosis via death receptors","type":"exact"}],"termid":"GO:0008625"}


id: PBO:0029410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_G2/M_transition_checkpoint_signaling","termid":"PBO:0029410"}


id: GO:1903303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["PMID:15804508","GO_REF:0000059","GOC:mr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pyruvate kinase activity (obsolete GO:1903303)","synonyms":[{"name":"down regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"down regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"down regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"down regulation of pyruvate kinase activity","type":"exact"},{"name":"down-regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"down-regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"down-regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"down-regulation of pyruvate kinase activity","type":"exact"},{"name":"downregulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"downregulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"downregulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"downregulation of pyruvate kinase activity","type":"exact"},{"name":"inhibition of ATP:pyruvate 2-O-phosphotransferase activity","type":"narrow"},{"name":"inhibition of phosphoenol transphosphorylase activity","type":"narrow"},{"name":"inhibition of phosphoenolpyruvate kinase activity","type":"narrow"},{"name":"inhibition of pyruvate kinase activity","type":"narrow"},{"name":"negative regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"negative regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"negative regulation of phosphoenolpyruvate kinase activity","type":"exact"}],"termid":"GO:1903303"}


id: GO:0033736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-lysine + O2 = (S)-2-amino-6-oxohexanoate + H2O2 + NH4+.","definition_xrefs":["RHEA:22548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-lysine 6-oxidase activity","secondary_identifiers":["MetaCyc:1.4.3.20-RXN","EC:1.4.3.20","KEGG_REACTION:R07598"],"synonyms":[{"name":"L-lysine-epsilon-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 6-oxidoreductase (deaminating) activity","type":"related"},{"name":"Lod","type":"related"},{"name":"LodA","type":"related"},{"name":"marinocine","type":"related"}],"termid":"GO:0033736"}


id: PBO:0081595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 1","termid":"PBO:0081595"}


id: GO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme MAP kinase kinase (MAPKK).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity (obsolete GO:0000186)","synonyms":[{"name":"activation of MAP kinase kinase activity","type":"exact"},{"name":"activation of MAP/ERK kinase kinase","type":"exact"},{"name":"activation of MAP2K activity","type":"exact"},{"name":"activation of MAPKK activity during sporulation","type":"narrow"},{"name":"positive regulation of MAPKK activity","type":"broad"}],"termid":"GO:0000186"}


id: MONDO:0015461
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"Short rib-polydactyly syndromes are a group of bone malformations characterized by a narrow thorax and polydactyly (usually preaxial).","definition_xrefs":["Orphanet:1505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"is_obsolete":false,"name":"short rib-polydactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0036996","MEDGEN:11412","GARD:18726","ICD9:756.3","icd11.foundation:960900212","NCIT:C85065","SCTID:205484001","MESH:D012779"],"termid":"MONDO:0015461","terms_by_termid":{"MONDO:0054565":null},"xrefs":{"Monarch":{"xref_id":"0015461"}}}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0002181","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: MONDO:0004058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome characterized by severe watery diarrhea, hypokalemia, and achlorhydria. It is caused by the oversecretion of vasoactive intestinal peptide from the pancreatic islet cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic cholera","secondary_identifiers":["MESH:D003969","ICD9:259.3","SCTID:39998009","DOID:6977","UMLS:C0086768","MEDGEN:39692","NCIT:C3488"],"synonyms":[{"name":"Verner Morrison syndrome","type":"exact"},{"name":"WDHA syndrome","type":"exact"},{"name":"WDHH","type":"exact"},{"name":"excessive vasoactive intestinal peptide secretion","type":"exact"},{"name":"islet cell WDHA syndrome","type":"exact"},{"name":"pancreatic WDHA syndrome","type":"exact"},{"name":"watery diarrhea syndrome","type":"exact"},{"name":"watery diarrhea with hypokalemic alkalosis","type":"exact"},{"name":"watery diarrhea, hypokalemia, and achlorhydria syndrome","type":"exact"},{"name":"watery diarrhoea syndrome","type":"exact"},{"name":"watery diarrhoea with hypokalemic alkalosis","type":"exact"}],"termid":"MONDO:0004058","xrefs":{"Monarch":{"xref_id":"0004058"}}}


id: PBO:0067720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 18","termid":"PBO:0067720"}


id: MONDO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic epidermal necrolysis","termid":"MONDO:0019810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stevens-Johnson syndrome/toxic epidermal necrolysis overlap syndrome","secondary_identifiers":["UMLS:C3661878","GARD:22066","icd11.foundation:496418968","MEDGEN:783034","Orphanet:506784"],"synonyms":[{"name":"SJS/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/toxic epidermal necrolysis overlap syndrome","type":"exact"}],"termid":"MONDO:0044739","xrefs":{"Monarch":{"xref_id":"0044739"}}}


id: GO:0033301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mitotic cell cycle in which mitosis is completed but cytokinesis does not occur, resulting in a cell containing multiple nuclei each with a chromosomal complement of the original ploidy (usually 2N).","definition_xrefs":["GOC:expert_vm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"}


id: MONDO:0100129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic malformation that is characterized by extraparenchymal, nonneoplastic accumulations of fluid with density similar to that of cerebrospinal fluid.","definition_xrefs":["OMIM:207790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachnoid cyst","termid":"MONDO:0008813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"intracranial arachoid cyst","secondary_identifiers":["MEDGEN:148353","UMLS:C0751615"],"synonyms":[{"name":"arachnoid cysts, intracranial","type":"exact"},{"name":"intracranial arachnoid cysts","type":"exact"}],"termid":"MONDO:0100129","xrefs":{"Monarch":{"xref_id":"0100129"}}}


id: PBO:0039748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O","termid":"PBO:0039748"}


id: PBO:0044894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 7","termid":"PBO:0044894"}


id: MOD:00326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-pyrrolysine (not known as a natural, post-translational modification process).","definition_xrefs":["Unimod:435#K","PubMed:11435424","PubMed:12029132","PubMed:15314242","PubMed:16096277","RESID:AA0321#LYS","PubMed:12029131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"L-pyrrolysine residue","termid":"MOD:01187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine (Lys)","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl(Lys)","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:00326"}


id: GO:0015024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2-sulfate groups of the 2-O-sulfo-D-glucuronate residues of chondroitin sulfate, heparin and heparitin sulfate.","definition_xrefs":["EC:3.1.6.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glucuronate-2-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.18-RXN"],"synonyms":[{"name":"chondro-2-sulfatase activity","type":"related"},{"name":"glucuronate-2-sulphatase activity","type":"exact"},{"name":"glucurono-2-sulfatase activity","type":"related"},{"name":"polysaccharide-2-O-sulfo-D-glucuronate 2-sulfohydrolase activity","type":"related"}],"termid":"GO:0015024"}


id: PBO:0072346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 32","termid":"PBO:0072346"}


id: PBO:0035855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_calcium_ion","termid":"PBO:0035855"}


id: PATO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two connected parts, roughly spherical, of different sizes.","definition_xrefs":["PATOC:MH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snowman-shaped","termid":"PATO:0002346"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: GO:0004904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an interferon and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","PMID:9607096","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interferon receptor activity","synonyms":[{"name":"IFN receptor activity","type":"exact"}],"termid":"GO:0004904"}


id: GO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete shmoo orientation (obsolete GO:0000284)","synonyms":[{"name":"shmoo orientation","type":"exact"}],"termid":"GO:0000284"}


id: MONDO:0016190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of protein ZASP","secondary_identifiers":["GARD:20429","UMLS:C5680840","MEDGEN:1842575","Orphanet:209050"],"termid":"MONDO:0016190","xrefs":{"Monarch":{"xref_id":"0016190"}}}


id: PBO:0069655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 932, pseudogene","termid":"PBO:0069655"}


id: PR:Q9C1X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bop1 gene.","definition_xrefs":["UniProtKB:Q9C1X4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P32A8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.03c","synonyms":[{"name":"Spom972h-bop1","type":"exact"}],"termid":"PR:Q9C1X4"}


id: FYPO:0001512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched and elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"branched, elongated cell","synonyms":[{"name":"branched, elongated cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell during vegetative growth","type":"exact"},{"name":"branched, elongated vegetative cell","type":"exact"},{"name":"branched, long cell","type":"exact"}],"termid":"FYPO:0001512"}


id: GO:0071918
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57963],"is_not":false,"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The process in which urea, the water-soluble compound H2N-CO-NH2, is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transport","termid":"GO:0015840"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"urea transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"urea membrane transport","type":"exact"}],"termid":"GO:0071918","terms_by_termid":{"GO:0071918":null}}


id: GO:0046249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature.","definition_xrefs":["PMID:29414896","PMID:10192895","PMID:14736461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-pinene metabolic process","termid":"GO:0018867"},{"relation_name":"is_a","term_name":"pinene catabolic process","termid":"GO:0033074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-pinene catabolic process","synonyms":[{"name":"alpha-pinene breakdown","type":"exact"},{"name":"alpha-pinene catabolism","type":"exact"},{"name":"alpha-pinene degradation","type":"exact"}],"termid":"GO:0046249"}


id: GO:1901330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"negatively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontoblast differentiation","synonyms":[{"name":"down regulation of odontoblast differentiation","type":"exact"},{"name":"down-regulation of odontoblast differentiation","type":"exact"},{"name":"downregulation of odontoblast differentiation","type":"exact"},{"name":"inhibition of odontoblast differentiation","type":"narrow"}],"termid":"GO:1901330"}


id: PBO:0017965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-type peptidase activity","termid":"PBO:0017965"}


id: GO:0106167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of extracellular ATP.","definition_xrefs":["GOC:tb","PMID:20817461","PMID:12948585","PMID:29274390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"cellular response to ATP","termid":"GO:0071318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular ATP signaling","termid":"GO:0106167"}


id: PBO:0053727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 941","termid":"PBO:0053727"}


id: PBO:0051548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7 receptor","termid":"PBO:0051548"}


id: MONDO:0011575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebro-oculo-nasal syndrome is a multisystem malformation syndrome that has been reported in about 10 patients. The clinical features include bilateral anophthalmia, abnormal nares, central nervous system anomalies, and neurodevelopmental delay.","definition_xrefs":["Orphanet:66625"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrooculonasal syndrome","secondary_identifiers":["MESH:C565313","SCTID:720855003","OMIM:605627","UMLS:C1854108","GARD:3480","MEDGEN:340138"],"synonyms":[{"name":"cerebrooculonasal syndrome","type":"exact"}],"termid":"MONDO:0011575","xrefs":{"Monarch":{"xref_id":"0011575"}}}


id: GO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the bundles of intermediate filaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"intermediate filament organization","termid":"GO:0045109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"intermediate filament bundle assembly","synonyms":[{"name":"tonofilament assembly","type":"narrow"}],"termid":"GO:0045110"}


id: PBO:0067646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 820, pseudogene","termid":"PBO:0067646"}


id: GO:0014826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the vein. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The vein is a vessel carrying blood away from the capillary beds.","definition_xrefs":["MSH:D014680","GOC:mtg_muscle","MA:0000715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vein smooth muscle contraction","termid":"GO:0014826"}


id: GO:0017057
data:
  {"annotated_genes":["SJAG_01824"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73440],"is_not":false,"summary":null,"term":"GO:0017057"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-O-phosphono-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate + H+.","definition_xrefs":["EC:3.1.1.31","RHEA:12556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"6-phosphogluconolactonase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02035","Reactome:R-HSA-71296","MetaCyc:6PGLUCONOLACT-RXN"],"synonyms":[{"name":"6-PGL","type":"related"},{"name":"6-phospho-D-glucono-1,5-lactone lactonohydrolase activity","type":"related"},{"name":"phosphogluconolactonase activity","type":"related"}],"termid":"GO:0017057","terms_by_termid":{"GO:0017057":null}}


id: MONDO:0700124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 21 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 disorder","termid":"MONDO:0700124","xrefs":{"Monarch":{"xref_id":"0700124"}}}


id: PBO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone M-factor receptor Map3","termid":"PBO:0001763"}


id: PR:Q9UU81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit gamma-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.06","synonyms":[{"name":"Spom972h-apl4","type":"exact"},{"name":"clathrin assembly protein complex 1 gamma-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large gamma-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU81"}


id: PBO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23 (predicted)","termid":"PBO:0000528"}


id: PBO:0041620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 7","termid":"PBO:0041620"}


id: GO:1990948
data:
  {"annotated_genes":["SJAG_01515","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99051,115952],"is_not":false,"summary":null,"term":"GO:1990948"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ubiquitin ligase.","definition_xrefs":["GOC:dph","GOC:vw","PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase inhibitor activity","termid":"GO:0055105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01515":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0004857","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"ubiquitin ligase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061637","GO:0090645"],"synonyms":[{"name":"APC-Cdc20 complex inhibitor activity","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibitor activity","type":"narrow"}],"termid":"GO:1990948","terms_by_termid":{"GO:1990948":null}}


id: MONDO:0012109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 4","secondary_identifiers":["OMIM:608742","UMLS:C1837479","MEDGEN:325180"],"synonyms":[{"name":"Hyt4","type":"related"},{"name":"hypertension, essential, susceptibility to, 4","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0012109","xrefs":{"Monarch":{"xref_id":"0012109"}}}


id: PBO:0004394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23b (predicted)","termid":"PBO:0004394"}


id: PBO:0068446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 20, pseudogene","termid":"PBO:0068446"}


id: PATO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000775 learning value (obsolete PATO:0000775)","termid":"PATO:0000775"}


id: PBO:0050324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 26","termid":"PBO:0050324"}


id: PATO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tangled quality inhering in a bearer by virtue of the bearer's being not possible to unravel.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tangled","termid":"PATO:0001846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matted","termid":"PATO:0001607"}


id: PBO:0034389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_directly_develop_into","termid":"PBO:0034389"}


id: GO:0042197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms. Halogens include fluorine, chlorine, bromine and iodine.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon metabolic process","synonyms":[{"name":"halogenated hydrocarbon metabolism","type":"exact"}],"termid":"GO:0042197"}


id: MONDO:0024303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The attachment of leeches to the skin. After the leeches drop off, bleeding may continue as a result of the action of hirudin. Bites may become infected or ulcerate.","direct_ancestors":[{"relation_name":"is_a","term_name":"hirudiniasis","termid":"MONDO:0001191"},{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"external hirudiniasis","secondary_identifiers":["ICD10CM:B88.3","icd11.foundation:1781413652","MEDGEN:838360","SCTID:1086871000119109","UMLS:C0392037"],"termid":"MONDO:0024303","xrefs":{"Monarch":{"xref_id":"0024303"}}}


id: GO:0019087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont-induced cellular transformation resulting in immortalized cells, or cells capable of indefinite replication. Usually mediated by viruses.","definition_xrefs":["PMID:24373315","ISBN:0781702534","PMID:18366075","PMID:11119620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated transformation of host cell","secondary_identifiers":["GO:0019088","Wikipedia:Viral_transformation","GO:0020021"],"synonyms":[{"name":"host cell immortalization","type":"exact"},{"name":"host cell transformation","type":"exact"},{"name":"immortalization of host cell","type":"exact"},{"name":"immortalization of host cell by virus","type":"related"},{"name":"transformation of host cell","type":"exact"},{"name":"transformation of host cell by virus","type":"exact"},{"name":"viral immortalization","type":"exact"},{"name":"viral transformation","type":"exact"},{"name":"viral transformation of host cell","type":"exact"},{"name":"virus-mediated transformation of host cell","type":"related"}],"termid":"GO:0019087"}


id: PBO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2/M_phase_transition","termid":"PBO:0031796"}


id: FYPO:0000272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell fails to form a septum.","definition_xrefs":["PMID:9649519","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished septum assembly","synonyms":[{"name":"abolished division septum assembly","type":"exact"},{"name":"abolished septation","type":"broad"},{"name":"abolished septum assembly during mitotic cell cycle","type":"related"},{"name":"abolished septum formation","type":"exact"},{"name":"septum assembly abolished","type":"exact"},{"name":"septum assembly abolished during vegetative growth","type":"exact"},{"name":"septum formation: absent","type":"related"},{"name":"septum initiation defective","type":"related"}],"termid":"FYPO:0000272"}


id: MONDO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sammartino-Decreccio syndrome","secondary_identifiers":["UMLS:C2931447","MEDGEN:419806"],"synonyms":[{"name":"Sammartino Decreccio syndrome","type":"related"},{"name":"superficial annular corneal dystrophy, ichthyosis nigrans, microcephaly and mild mental subnormality","type":"related"}],"termid":"MONDO:0042600","xrefs":{"Monarch":{"xref_id":"0042600"}}}


id: GO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 7-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 7-O-glucosyltransferase activity","termid":"GO:0080044"}


id: PBO:0069004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 248, pseudogene","termid":"PBO:0069004"}


id: MONDO:0004985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the brain that causes unusual shifts in mood, energy, activity levels and the ability to carry out day-to-day tasks. Often these moods range and shift from periods of elation and energized behavior to those of hopelessness and depression.","definition_xrefs":["NCIT:C34423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipolar disorder","secondary_identifiers":["NIFSTD:birnlex_12754","UMLS:C0005586","MEDGEN:2649","ICD9:296.60","SCTID:13746004","DOID:3312","ICD9:296.40","ICD9:296.89","ICD10CM:F31","MESH:D001714","ICD9:296.80","ICD10WHO:F31"],"synonyms":[{"name":"MAFD","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"bipolar depression","type":"narrow"},{"name":"bipolar disorder","type":"exact"},{"name":"bipolar disorder manic phase","type":"narrow"},{"name":"depressive-manic psych.","type":"related"},{"name":"major affective disorder","type":"exact"},{"name":"major bipolar affective disorder","type":"related"},{"name":"manic bipolar I disorder","type":"narrow"},{"name":"manic bipolar affective disorder","type":"narrow"},{"name":"manic depression","type":"narrow"},{"name":"manic depressive disorder","type":"narrow"},{"name":"manic disorder","type":"narrow"},{"name":"manic-depression","type":"exact"},{"name":"manic-depressive illness","type":"related"},{"name":"manic-depressive psychosis","type":"related"},{"name":"mixed bipolar disorder","type":"narrow"}],"termid":"MONDO:0004985","xrefs":{"Monarch":{"xref_id":"0004985"}}}


id: PBO:0017770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nuf2","termid":"PBO:0017770"}


id: GO:1902737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, membranous protrusion found primarily on dendritic stretches of developing neurons. May receive synaptic input, and can develop into dendritic spines.","definition_xrefs":["GO_REF:0000064","PMID:24464040","GOC:TermGenie","GOC:PARL","GOC:pad","Wikipedia:Dendritic_filopodia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic filopodium","synonyms":[{"name":"dendrite filopodium","type":"exact"}],"termid":"GO:1902737"}


id: PBO:0058055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4276","termid":"PBO:0058055"}


id: MONDO:0030332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 46","secondary_identifiers":["MEDGEN:1780196","OMIM:619436","UMLS:C5543646"],"synonyms":[{"name":"CILD46","type":"exact"},{"name":"ciliary dyskinesia, primary, 46","type":"exact"}],"termid":"MONDO:0030332","xrefs":{"Monarch":{"xref_id":"0030332"}}}


id: MONDO:0013907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral generalized polymicrogyria is a rare neurological disorder that affects the cerebral cortex (the outer surface of the brain). This is the most widespread form of polymicrogyria and typically affects the entire surface of the brain. Signs and symptoms include severe intellectual disability, problems with movement, and seizures that are difficult or impossible to treat. While the exact cause of bilateral generalized polymicrogyria is not fully understood, it is thought to be due to improper brain development during embryonic growth. Most cases appear to follow an autosomal recessive pattern of inheritance. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"},{"relation_name":"is_a","term_name":"microcephalic primordial dwarfism due to RTTN deficiency","termid":"MONDO:0018764"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral generalized polymicrogyria","secondary_identifiers":["Orphanet:208447","GARD:10786","DOID:0080920","MEDGEN:1684616","UMLS:C5139324"],"synonyms":[{"name":"MSSP","type":"related"},{"name":"PMGYS","type":"related"},{"name":"bilateral generalized polymicrogyria","type":"exact"},{"name":"microcephaly, short stature, and polymicrogyria with or without seizures","type":"related"},{"name":"microcephaly, short stature, and polymicrogyria with seizures","type":"exact"},{"name":"polymicrogyria with seizures","type":"related"}],"termid":"MONDO:0013907","xrefs":{"Monarch":{"xref_id":"0013907"}}}


id: GO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an N-box, a DNA motif with the consensus sequence CACNAG that is found in the promoters of genes expressed preferentially at synapses.","definition_xrefs":["PMID:11498047","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"N-box binding","synonyms":[{"name":"N box binding","type":"exact"},{"name":"N-box promoter binding","type":"exact"}],"termid":"GO:0071820"}


id: GO:0032632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-3 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-3 production","secondary_identifiers":["GO:0072601","GO:0042223"],"synonyms":[{"name":"IL-3 production","type":"exact"},{"name":"interleukin-3 biosynthetic process","type":"narrow"},{"name":"interleukin-3 secretion","type":"narrow"}],"termid":"GO:0032632"}


id: GO:0034351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell apoptotic process","synonyms":[{"name":"down regulation of glial cell apoptosis","type":"exact"},{"name":"down-regulation of glial cell apoptosis","type":"exact"},{"name":"downregulation of glial cell apoptosis","type":"exact"},{"name":"inhibition of glial cell apoptosis","type":"narrow"},{"name":"negative regulation of glial cell apoptosis","type":"narrow"}],"termid":"GO:0034351"}


id: MONDO:0018284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with neurological involvement (obsolete MONDO:0018284)","secondary_identifiers":["Orphanet:371047"],"synonyms":[{"name":"CDG with neurological involvement","type":"exact"}],"termid":"MONDO:0018284","xrefs":{"Monarch":{"xref_id":"0018284"}}}


id: MONDO:0010231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 20","secondary_identifiers":["OMIM:300047","DOID:0112023","GARD:22667","MESH:C563142","UMLS:C0796226","MEDGEN:208677"],"synonyms":[{"name":"MRX20","type":"exact"},{"name":"intellectual disability, X-linked 20","type":"exact"},{"name":"mental retardation, X-linked 20","type":"related"}],"termid":"MONDO:0010231","xrefs":{"Monarch":{"xref_id":"0010231"}}}


id: PBO:0062155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 6 pseudogene","termid":"PBO:0062155"}


id: GO:0090315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"}


id: GO:0062139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a light-responsive receptor in a camera-type eye over time, from its formation to the mature structure.","definition_xrefs":["PMID:30237290","PMID:20648062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell development","termid":"GO:0062139"}


id: GO:0009328
data:
  {"annotated_genes":["SJAG_02206","SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77935,79250],"is_not":false,"summary":null,"term":"GO:0009328"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of phenylalanine to tRNA(Phe), forming L-phenylalanyl-tRNA(Phe).","definition_xrefs":["PMID:20223217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"phenylalanine-tRNA ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0009328","terms_by_termid":{"GO:0009328":null}}


id: PBO:0077042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis associated oncogenic lncRNA","termid":"PBO:0077042"}


id: MONDO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioma arising from the central nervous system. This category includes diffuse astrocytoma, ependymoma, oligodendroglioma, and oligoastrocytoma.","definition_xrefs":["NCIT:C132505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade II glioma","secondary_identifiers":["MEDGEN:1391502","UMLS:C4330050"],"synonyms":[{"name":"WHO grade II glioma","type":"exact"},{"name":"grade II glioma","type":"exact"}],"termid":"MONDO:0021639","xrefs":{"Monarch":{"xref_id":"0021639"}}}


id: FYPO:0006112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0004170"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0006112"}


id: internal:name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name","termid":"internal:name"}


id: PBO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit (predicted)","termid":"PBO:0001109"}


id: GO:2000081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway modulating the rate or frequency of pancreatic B cell proliferation.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation (obsolete GO:2000081)","synonyms":[{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:2000081"}


id: MONDO:0015877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformative syndrome with dentinogenesis imperfecta (obsolete MONDO:0015877)","secondary_identifiers":["Orphanet:180766"],"termid":"MONDO:0015877","xrefs":{"Monarch":{"xref_id":"0015877"}}}


id: GO:0140772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + hexadecanoyl-CoA = CoA + H+ + N(6)-hexadecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:30061757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0140772"}


id: PBO:0011441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic eisosome BAR domain protein Pil2","termid":"PBO:0011441"}


id: PBO:0053975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1287","termid":"PBO:0053975"}


id: PBO:0026737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_polymerase_processivity_factor_activity","termid":"PBO:0026737"}


id: GO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate specification","termid":"GO:0060912"},{"relation_name":"part_of","term_name":"cardioblast cell fate commitment","termid":"GO:0042684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast cell fate specification","termid":"GO:0042685"}


id: GO:0016939
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes.","definition_xrefs":["PMID:20930137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"kinesin II complex","termid":"GO:0016939"}


id: MONDO:0014105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the DUSP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 19 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","MEDGEN:815311","OMIM:615269","GARD:15931","DOID:0090090","UMLS:C3808981"],"synonyms":[{"name":"DUSP6 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH19","type":"related"},{"name":"hypogonadotropic hypogonadism 19 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in DUSP6","type":"exact"}],"termid":"MONDO:0014105","xrefs":{"Monarch":{"xref_id":"0014105"}}}


id: GO:0061815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ubiquitin units from Met1-linked (or linear) polyubiquitin chains.","definition_xrefs":["PMID:27702987","GOC:dph","PMID:26503766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type deubiquitinase activity","termid":"GO:0004843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"Met1-linked polyubiquitin deubiquitinase activity","secondary_identifiers":["Reactome:R-HSA-9818975"],"synonyms":[{"name":"Met1 linkage specific DUB","type":"exact"},{"name":"cysteine-type deubiquitinase activity, acting on linear ubiquitin","type":"exact"},{"name":"deubiquitinase, acting on linear ubiquitin","type":"broad"},{"name":"linear ubiquitin specific deubiquitinase activity","type":"exact"},{"name":"ubiquitinyl hydrolase activity, acting on linear ubiquitin","type":"exact"}],"termid":"GO:0061815"}


id: PBO:0004054
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.-","termid":"PBO:0004054"}


id: GO:1902396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a bicellular tight junction.","definition_xrefs":["GOC:TermGenie","PMID:18332111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to bicellular tight junction","synonyms":[{"name":"protein localisation in tight junction","type":"exact"},{"name":"protein localisation to tight junction","type":"exact"},{"name":"protein localization in tight junction","type":"exact"}],"termid":"GO:1902396"}


id: PBO:0082852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coproporphyrinogen III oxidase; oxygen-requiring enzyme that catalyzes sixth step in heme biosynthetic pathway; transcription is repressed by oxygen and heme (via Rox1p and Hap1p); human homolog CPOX can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0082852"}


id: MONDO:0013463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dextro-looped transposition of the great arteries in which the cause of the disease is a mutation in the GDF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"},{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types, 6","secondary_identifiers":["OMIM:613854","UMLS:C3151221","MEDGEN:462571","DOID:0060772"],"synonyms":[{"name":"CHTD6","type":"related"},{"name":"DTGA3","type":"exact"},{"name":"GDF1 dextro-looped transposition of the great arteries","type":"exact"},{"name":"congenital heart defects, multiple types, 6","type":"exact"},{"name":"dextro-looped transposition of the great arteries 3","type":"exact"},{"name":"dextro-looped transposition of the great arteries caused by mutation in GDF1","type":"exact"},{"name":"dextro-looped transposition of the great arteries type 3","type":"exact"},{"name":"transposition of the great arteries, dextro-looped 3","type":"related"},{"name":"transposition of the great arteries, dextro-looped 3, formerly","type":"related"},{"name":"transposition of the great arteries, dextro-looped type 3","type":"exact"}],"termid":"MONDO:0013463","xrefs":{"Monarch":{"xref_id":"0013463"}}}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: PBO:0042255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 2","termid":"PBO:0042255"}


id: MONDO:0013803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"leukoencephalopathy with calcifications and cysts","secondary_identifiers":["MESH:C000598644","MEDGEN:482830","OMIM:614561","Orphanet:542310","UMLS:C3281200","GARD:10732"],"synonyms":[{"name":"LCC","type":"exact"},{"name":"Labrune syndrome","type":"related"},{"name":"leukoencephalopathy, brain calcifications, and cysts","type":"exact"}],"termid":"MONDO:0013803","xrefs":{"Monarch":{"xref_id":"0013803"}}}


id: GO:0030353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacts with the fibroblast growth factor receptor to reduce the action of another ligand, the agonist.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"},{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0005515","GO:0005488","GO:0140678"],"is_obsolete":false,"name":"fibroblast growth factor receptor antagonist activity","synonyms":[{"name":"FGF receptor antagonist activity","type":"exact"},{"name":"FGFR antagonist activity","type":"exact"}],"termid":"GO:0030353"}


id: MONDO:0018672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgG4-related aortitis","secondary_identifiers":["GARD:21883","MEDGEN:1800431","icd11.foundation:593151236","Orphanet:449400","UMLS:C5569008"],"synonyms":[{"name":"IgG4-related periaortitis","type":"exact"}],"termid":"MONDO:0018672","xrefs":{"Monarch":{"xref_id":"0018672"}}}


id: PATO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a mother.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000434 maternal (obsolete PATO:0000434)","termid":"PATO:0000434"}


id: PBO:0031654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031654"}


id: SO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An STS map is a physical map organized by the unique STS landmarks.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"STS","termid":"SO:0000331"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS_map","synonyms":[{"name":"STS map","type":"exact"}],"termid":"SO:0001251"}


id: PBO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp22","termid":"PBO:0000839"}


id: PR:Q9USN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.06c","secondary_identifiers":["UniProtKB:Q9USN0"],"synonyms":[{"name":"GPI mannosyltransferase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGB","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN0"}


id: MONDO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order enoplida.","definition_xrefs":["MESH:D017189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Nematoda infectious disease","termid":"MONDO:0005871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoplea infectious disease","synonyms":[{"name":"Enoplea caused disease or disorder","type":"exact"},{"name":"Enoplea disease or disorder","type":"exact"}],"termid":"MONDO:0005745","xrefs":{"Monarch":{"xref_id":"0005745"}}}


id: PBO:0070390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor tyrosine kinase like orphan receptor 1","termid":"PBO:0070390"}


id: PBO:0058725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6853","termid":"PBO:0058725"}


id: MONDO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enlargement of an area of the body due to obstruction within the lymphatic system and the resulting accumulation of lymph.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphedema","termid":"MONDO:0019297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"elephantiasis","secondary_identifiers":["UMLS:C0013882","EFO:0004711","MEDGEN:8582","MESH:D004604","SCTID:240820001","DOID:4976"],"termid":"MONDO:0005424","xrefs":{"Monarch":{"xref_id":"0005424"}}}


id: PBO:0051826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2 binding protein 2","termid":"PBO:0051826"}


id: PBO:0078402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 12-1","termid":"PBO:0078402"}


id: GO:0140814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + Na+(out) + Cl-(out)= glycine betaine(in) + Na+(in) + Cl-(in).","definition_xrefs":["PMID:10358010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine transmembrane transporter activity","termid":"GO:0015199"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycine betaine:sodium:chloride symporter activity","secondary_identifiers":["RHEA:71175"],"synonyms":[{"name":"sodium/chloride-dependent glycine betaine transporter activity","type":"broad"}],"termid":"GO:0140814"}


id: GO:0106282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta,7-beta-dihydroxy-5-beta-cholan-24-oate + NAD+ = 3-beta-hydroxy-7-oxo-5-beta-cholan-24-oate + H+ + NADH.","definition_xrefs":["PMID:12917011","RHEA:42024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106282"}


id: PBO:0058309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4682","termid":"PBO:0058309"}


id: PBO:0049998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 4","termid":"PBO:0049998"}


id: GO:0106076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + lysine in peptide = CoA + N-succinyl-lysine-peptide.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-succinyltransferase activity","termid":"GO:0106075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"peptide-lysine-N-succinyltransferase activity","termid":"GO:0106076"}


id: MONDO:0012140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary function (obsolete MONDO:0012140)","secondary_identifiers":["OMIM:608852"],"synonyms":[{"name":"Plf","type":"related"},{"name":"lung function, accelerated rate of decline In, smoking-related","type":"related"},{"name":"pulmonary function","type":"related"}],"termid":"MONDO:0012140","xrefs":{"Monarch":{"xref_id":"0012140"}}}


id: PBO:0046541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 4","termid":"PBO:0046541"}


id: GO:0060939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epicardial-derived cardiac fibroblast over time, from its formation to the mature state. A epicardial-derived cardiac fibroblast is a connective tissue cell of the heart that arises from the epicardium and secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell development","termid":"GO:0060936"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}


id: PBO:0060424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 3","termid":"PBO:0060424"}


id: GO:0035625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an epidermal growth factor-activated receptor is activated via signaling events from a consequence of a G protein-coupled . This is an example of cross-talk between the EGF and GPCR signaling pathways.","definition_xrefs":["PMID:10622253","GOC:bf","PMID:17655843","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor-activated receptor transactivation by G-protein coupled receptor signaling pathway (obsolete GO:0035625)","synonyms":[{"name":"EGFR transactivation by GPCR","type":"exact"},{"name":"EGFR transactivation upon GPCR stimulation","type":"exact"},{"name":"epidermal growth factor receptor transactivation by G-protein coupled receptor signaling pathway","type":"exact"},{"name":"epidermal growth factor-activated receptor transactivation by G-protein coupled receptor signalling pathway","type":"exact"}],"termid":"GO:0035625"}


id: GO:1902440
data:
  {"annotated_genes":["SJAG_01371","SJAG_03437","SJAG_05266","SJAG_01775","SJAG_05319","SJAG_01211","SJAG_01546","SJAG_04455","SJAG_01224","SJAG_00229","SJAG_06270","SJAG_03508","SJAG_01790","SJAG_02731","SJAG_00918","SJAG_00082","SJAG_05220","SJAG_02514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90359],"is_not":false,"summary":null,"term":"GO:1902440"},{"annotations":[95998,75009,101633,107911,105412,110552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[90104,114486,91340,117309,107877,109268,97129,100887,110275,89499,98983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:22438582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990975"],"synonyms":[{"name":"establishment of protein localization to mitotic spindle pole body","type":"narrow"},{"name":"protein localisation in mitotic spindle pole body","type":"exact"},{"name":"protein localisation to mitotic spindle pole body","type":"exact"},{"name":"protein localization in mitotic spindle pole body","type":"exact"}],"termid":"GO:1902440","terms_by_termid":{"GO:0061509":null,"GO:1902440":null,"GO:1990976":null}}


id: GO:0030903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord development","termid":"GO:0030903"}


id: PBO:0058256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4634","termid":"PBO:0058256"}


id: MONDO:0016782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal 14q32.2 hypomethylation syndrome","secondary_identifiers":["Orphanet:254531","UMLS:C5680721","GARD:17222","MEDGEN:1842839"],"termid":"MONDO:0016782","xrefs":{"Monarch":{"xref_id":"0016782"}}}


id: GO:0033352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-apiose, uridinediphosphoapicose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-apiose metabolic process","termid":"GO:0033351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-D-apiose biosynthetic process","synonyms":[{"name":"UDP-D-apiose anabolism","type":"exact"},{"name":"UDP-D-apiose biosynthesis","type":"exact"},{"name":"UDP-D-apiose formation","type":"exact"},{"name":"UDP-D-apiose synthesis","type":"exact"}],"termid":"GO:0033352"}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[119575,119949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119694,119945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0004803"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","sty1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: PBO:0041878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated TTC17 interacting protein","termid":"PBO:0041878"}


id: MONDO:0859312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with growth retardation, dysmorphic facies, and corpus callosum abnormalities","secondary_identifiers":["OMIM:620113","MEDGEN:1824024","UMLS:C5774251"],"termid":"MONDO:0859312","xrefs":{"Monarch":{"xref_id":"0859312"}}}


id: GO:0160161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of propanediol catabolic process.","definition_xrefs":["PMID:7559322","PMID:9023178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"propanediol catabolic process","termid":"GO:0051144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of propanediol catabolic process","termid":"GO:0160161"}


id: GO:0004817
data:
  {"annotated_genes":["SJAG_00420"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72746],"is_not":false,"summary":null,"term":"GO:0004817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys).","definition_xrefs":["EC:6.1.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00420":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016874","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"cysteine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380158","RHEA:17773","MetaCyc:CYSTEINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379887"],"synonyms":[{"name":"L-cysteine:tRNACys ligase (AMP-forming)","type":"related"},{"name":"cysteine translase activity","type":"related"},{"name":"cysteinyl-tRNA synthetase activity","type":"exact"},{"name":"cysteinyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"cysteinyl-transferRNA synthetase activity","type":"related"}],"termid":"GO:0004817","terms_by_termid":{"GO:0004817":null}}


id: GO:1902072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-inducible factor-1alpha signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:1902071"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:0097411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"down regulation of HIF1alpha pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"down-regulation of HIF1alpha pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"downregulation of HIF1alpha pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"inhibition of HIF1alpha pathway","type":"exact"},{"name":"inhibition of hypoxia-inducible factor-1alpha signaling pathway","type":"narrow"},{"name":"inhibition of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"negative regulation of HIF1alpha pathway","type":"exact"},{"name":"negative regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:1902072"}


id: GO:0070463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of a tubulin dimer to accelerate release of ADP and phosphate.","definition_xrefs":["PMID:16906148","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"tubulin-dependent ATPase activity","synonyms":[{"name":"tubulin-activated ATPase activity","type":"exact"}],"termid":"GO:0070463"}


id: MONDO:0054866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sudden arrhythmia death syndrome","secondary_identifiers":["SCTID:735686002","UMLS:C2721586","MEDGEN:439428"],"synonyms":[{"name":"SADS","type":"related"},{"name":"sudden arrhythmic death syndrome","type":"exact"},{"name":"sudden cardiac death due to cardiac arrhythmia","type":"related"}],"termid":"MONDO:0054866","xrefs":{"Monarch":{"xref_id":"0054866"}}}


id: GO:0043406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAP kinase activity","termid":"GO:0043405"},{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MAP kinase activity","synonyms":[{"name":"positive regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"positive regulation of mitogen-activated protein kinase activity","type":"exact"},{"name":"stimulation of MAPK activity","type":"narrow"},{"name":"up regulation of MAPK activity","type":"exact"},{"name":"up-regulation of MAPK activity","type":"exact"},{"name":"upregulation of MAPK activity","type":"exact"}],"termid":"GO:0043406"}


id: SO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial rRNA is an RNA component of the small or large subunits of mitochondrial ribosomes.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA","synonyms":[{"name":"Mt rRNA","type":"exact"},{"name":"Mt_rRNA","type":"exact"},{"name":"mitochondrial rRNA","type":"exact"},{"name":"mitochondrial_rRNA","type":"exact"}],"termid":"SO:0002128"}


id: MONDO:0030008
data:
  {"annotated_genes":["SJAG_05560"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85878],"is_not":false,"summary":null,"term":"MONDO:0030008"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618839","UMLS:C5394237","DOID:0112118","MEDGEN:1709379"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 42","type":"exact"},{"name":"COXPD42","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 42","type":"exact"}],"termid":"MONDO:0030008","terms_by_termid":{"MONDO:0030008":null},"xrefs":{"Monarch":{"xref_id":"0030008"}}}


id: PR:000035410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic checkpoint serine/threonine-protein kinase BUB1 phosphorylated 5 in Schizosaccharomyces pombe 972h-. This form represents the basal phosphorylated state observed during interphase and mitosis. UniProtKB:O94751, MOD:00696.","definition_xrefs":["PMID:12606573","PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic checkpoint serine/threonine-protein kinase BUB1 phosphorylated 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.12c","synonyms":[{"name":"Spom972h-BUB1/Phos:5","type":"exact"}],"termid":"PR:000035410"}


id: GO:0008410
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77165,75928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008775"},{"annotations":[91801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008260"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.3.-"],"termid":"GO:0008410","terms_by_termid":{"GO:0008260":null,"GO:0008775":null}}


id: GO:0120154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ERBB4 signaling pathway.","definition_xrefs":["PMID:15219672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ERBB signaling pathway","termid":"GO:1901185"},{"relation_name":"negatively_regulates","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ERBB4 signaling pathway","termid":"GO:0120154"}


id: GO:1990146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a rhabdomere.","definition_xrefs":["GOC:sart","PMID:8335687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to rhabdomere","termid":"GO:1990146"}


id: GO:0102197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: but-3-enoate + H2O = allyl alcohol + formate.","definition_xrefs":["GOC:pz","PMID:19555778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vinylacetate caboxylester hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12087"],"termid":"GO:0102197"}


id: FYPO:0000100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chloramphenicol. Cells stop growing (and may die) at a concentration of chloramphenicol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to chloramphenicol","synonyms":[{"name":"hypersensitive to chloramphenicol","type":"exact"},{"name":"sensitive to chloramphenicol during mitotic cell cycle","type":"related"},{"name":"sensitive to chloramphenicol during vegetative growth","type":"exact"}],"termid":"FYPO:0000100"}


id: PBO:0029147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029147"}


id: MONDO:1011679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary pancreatitis, non-human animal","secondary_identifiers":["OMIA:001403"],"termid":"MONDO:1011679","xrefs":{"Monarch":{"xref_id":"1011679"}}}


id: FYPO:0002010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of iron ion starvation-induced proteins","synonyms":[{"name":"increased level of iron ion depletion-induced proteins","type":"exact"},{"name":"increased level of iron ion deprivation-induced proteins","type":"exact"},{"name":"increased level of iron ion starvation-induced proteins during mitotic cell cycle","type":"related"},{"name":"increased level of iron ion starvation-induced proteins during vegetative growth","type":"exact"},{"name":"increased level of proteins expressed during iron ion starvation","type":"exact"},{"name":"increased level of proteins induced by iron ion starvation","type":"exact"},{"name":"increased protein level of genes (normally) induced during iron starvation","type":"exact"}],"termid":"FYPO:0002010"}


id: PBO:0088704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF","termid":"PBO:0088704"}


id: FYPO:0000377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is increased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased frequency of apoptosis","synonyms":[{"name":"apoptosis: increased","type":"related"},{"name":"increased apoptosis","type":"exact"},{"name":"increased apoptotic frequency","type":"exact"}],"termid":"FYPO:0000377"}


id: PBO:0085872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; HVG1 has a paralog, VRG4, that arose from the whole genome duplication","termid":"PBO:0085872"}


id: GO:1903683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GO_REF:0000058","PMID:18394891","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"},{"relation_name":"positively_regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell-cell adhesion involved in epithelium migration","synonyms":[{"name":"activation of epithelial cell-cell adhesion involved in epithelium migration","type":"narrow"},{"name":"up regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"up-regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"upregulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"}],"termid":"GO:1903683"}


id: GO:0001172
data:
  {"annotated_genes":["SJAG_04030","SJAG_03356","SJAG_01436","SJAG_02070","SJAG_00119","SJAG_00458","SJAG_02101","SJAG_01313","SJAG_04894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58290,58510,59542,60544,62688,63580,63821,64078,68390],"is_not":false,"summary":null,"term":"GO:0001172"}]},"cv_name":"biological_process","definition":"The synthesis of an RNA transcript from an RNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_03356":null,"SJAG_04030":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA-templated transcription","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"transcription, RNA-dependent","type":"exact"},{"name":"transcription, RNA-templated","type":"exact"}],"termid":"GO:0001172","terms_by_termid":{"GO:0001172":null}}


id: PBO:0017710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase involved in depalmitoylation (predicted)","termid":"PBO:0017710"}


id: PBO:0114069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 16","termid":"PBO:0114069"}


id: GO:0070248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"negatively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell apoptotic process","synonyms":[{"name":"down regulation of natural killer cell apoptosis","type":"exact"},{"name":"down-regulation of natural killer cell apoptosis","type":"exact"},{"name":"downregulation of natural killer cell apoptosis","type":"exact"},{"name":"inhibition of natural killer cell apoptosis","type":"narrow"},{"name":"negative regulation of NK cell apoptosis","type":"exact"},{"name":"negative regulation of natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070248"}


id: PBO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi coiled-coil protein Tmf1","termid":"PBO:0090369"}


id: PBO:0049724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 2","termid":"PBO:0049724"}


id: PBO:0047650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 6","termid":"PBO:0047650"}


id: PBO:0065810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3D, member RAS oncogene family","termid":"PBO:0065810"}


id: GO:1905799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["PMID:27930654","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intraciliary retrograde transport","synonyms":[{"name":"regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905799"}


id: GO:0097300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:mtg_apoptosis","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death","secondary_identifiers":["Reactome:R-HSA-5218859"],"synonyms":[{"name":"programmed cell death by necrosis","type":"exact"},{"name":"regulated necrosis","type":"broad"}],"termid":"GO:0097300"}


id: MONDO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 22, primary, autosomal recessive","secondary_identifiers":["MEDGEN:1635688","OMIM:617984","UMLS:C4693834","GARD:16279"],"synonyms":[{"name":"MCPH22","type":"related"},{"name":"microcephaly 22, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054805","xrefs":{"Monarch":{"xref_id":"0054805"}}}


id: FYPO:0002496
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119557,119558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is normal (i.e. indistinguishable from wild type). A metabolic process is any set of chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances.","definition_xrefs":["PomBase:mah","GO:0044237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal metabolic process","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular metabolic process","type":"exact"},{"name":"normal metabolism","type":"exact"}],"termid":"FYPO:0002496","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0078954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 5-1","termid":"PBO:0078954"}


id: GO:0102947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-delta-cadinene + NADPH + O2 = 8-hydroxy-(+)-delta-cadinene + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-delta-cadinene-8-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9045"],"termid":"GO:0102947"}


id: PBO:0085207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outward-rectifier potassium channel of the plasma membrane; has two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin","termid":"PBO:0085207"}


id: PBO:0059400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31 pseudogene 2","termid":"PBO:0059400"}


id: PBO:0060414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA50 pseudogene 1","termid":"PBO:0060414"}


id: PBO:0047846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 2","termid":"PBO:0047846"}


id: GO:0050799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cocaine, an alkaloid obtained from the dried leaves of the shrub Erythroxylon coca. It is a cerebral stimulant and narcotic.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"cocaine metabolic process","termid":"GO:0050783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cocaine biosynthetic process","synonyms":[{"name":"cocaine anabolism","type":"exact"},{"name":"cocaine biosynthesis","type":"exact"},{"name":"cocaine formation","type":"exact"},{"name":"cocaine synthesis","type":"exact"}],"termid":"GO:0050799"}


id: PBO:0086843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative purine-cytosine permease; very similar to Fcy2p but cannot substitute for its function","termid":"PBO:0086843"}


id: PR:Q9Y7N6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1450.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7N6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1450.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.09c","synonyms":[{"name":"Spom972h-SPCC1450.09c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N6"}


id: PATO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to a reduced rate.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neotenous growth","synonyms":[{"name":"neotenic growth","type":"exact"}],"termid":"PATO:0001491"}


id: SO:0000557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3'-most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_clip","synonyms":[{"name":"3'-clip","type":"exact"},{"name":"three prime clip","type":"exact"}],"termid":"SO:0000557"}


id: GO:1990169
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010273"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a copper ion stimulus.","definition_xrefs":["GOC:kmv","PMID:23437011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to copper ion","termid":"GO:0046688"},{"relation_name":"is_a","term_name":"stress response to metal ion","termid":"GO:0097501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to copper ion","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"response to copper ion stress","type":"exact"},{"name":"response to copper toxicity","type":"related"},{"name":"stress response to copper","type":"broad"}],"termid":"GO:1990169","terms_by_termid":{"GO:0010273":null}}


id: PBO:0050932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 1","termid":"PBO:0050932"}


id: MONDO:0014653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ZNF408 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 72","secondary_identifiers":["GARD:16119","OMIM:616469","DOID:0110395","MEDGEN:895867","UMLS:C4225315","ICD10CM:H35.5"],"synonyms":[{"name":"RP72","type":"exact"},{"name":"ZNF408 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 72","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ZNF408","type":"exact"},{"name":"retinitis pigmentosa type 72","type":"exact"}],"termid":"MONDO:0014653","xrefs":{"Monarch":{"xref_id":"0014653"}}}


id: PBO:0075922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 14","termid":"PBO:0075922"}


id: MONDO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 3, congenital, autosomal dominant","secondary_identifiers":["MEDGEN:374873","MESH:C537855","OMIM:608345","DOID:0111793","UMLS:C1842186"],"synonyms":[{"name":"NYS3","type":"exact"},{"name":"NYSTAGMUS 3, congenital, autosomal dominant","type":"related"}],"termid":"MONDO:0012015","xrefs":{"Monarch":{"xref_id":"0012015"}}}


id: PBO:0084602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR391W was originally annotated as an independent ORF, but was completely contained in larger ORF YLR391W-A in the same frame, and was merged into it on 7-30-1997","termid":"PBO:0084602"}


id: MOD:01211
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-(morpholine-2-acetyl)-lysine.","definition_xrefs":["PubMed:10446193","Unimod:29#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morpholine-2-acetylated residue","termid":"MOD:01813"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(morpholine-2-acetyl)-lysine","synonyms":[{"name":"N-Succinimidyl-2-morpholine acetate","type":"related"},{"name":"N-succinimidylmorpholine-2-acetate N6-derivatized lysine","type":"exact"},{"name":"SMA","type":"related"}],"termid":"MOD:01211"}


id: GO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis","secondary_identifiers":["Reactome:R-HSA-9664424"],"termid":"GO:0060326"}


id: GO:0005624
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane fraction (obsolete GO:0005624)","synonyms":[{"name":"membrane fraction","type":"exact"}],"termid":"GO:0005624"}


id: GO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the trochlear nerve is generated and organized. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"trochlear nerve development","termid":"GO:0021558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve morphogenesis","synonyms":[{"name":"CH IV morphogenesis","type":"related"}],"termid":"GO:0021639"}


id: PBO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein Cdb4, peptidase family","termid":"PBO:0001057"}


id: PBO:0055280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2707","termid":"PBO:0055280"}


id: GO:0050497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alkylthio group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.8.4.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alkylthioltransferase activity","synonyms":[{"name":"transferase activity, transferring alkylthio groups","type":"exact"}],"termid":"GO:0050497"}


id: MONDO:0035220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"PLG-related hereditary angioedema with normal C1inh","secondary_identifiers":["UMLS:C5680155","ICD10CM:D84.1","Orphanet:537072","MEDGEN:1843266","GARD:22217"],"synonyms":[{"name":"PLG-related HAE with normal C1 inhibitor","type":"exact"}],"termid":"MONDO:0035220","xrefs":{"Monarch":{"xref_id":"0035220"}}}


id: FYPO:0006865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to streptonigrin. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to streptonigrin during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to streptonigrin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to rufocromomycin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin during vegetative growth","type":"exact"}],"termid":"FYPO:0006865"}


id: PBO:0042816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 5","termid":"PBO:0042816"}


id: PBO:0044724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 11 (pseudogene)","termid":"PBO:0044724"}


id: MONDO:0021077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that contains a single or multiple cystic spaces. Examples include cystadenoma, mucinous cystadenocarcinoma, and serous cystadenocarcinoma.","definition_xrefs":["NCIT:C6784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic neoplasm","secondary_identifiers":["UMLS:C1333190","MEDGEN:232404"],"synonyms":[{"name":"cystic neoplasm","type":"exact"},{"name":"cystic tumor","type":"exact"},{"name":"cystic tumour","type":"exact"}],"termid":"MONDO:0021077","xrefs":{"Monarch":{"xref_id":"0021077"}}}


id: PBO:0038595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase medium chain","termid":"PBO:0038595"}


id: MONDO:0002423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the rectosigmoid region. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Rectosigmoid adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.","definition_xrefs":["NCIT:C4877"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"sigmoid neoplasm","termid":"MONDO:0006971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectosigmoid junction neoplasm","secondary_identifiers":["SCTID:126848003","UMLS:C0345873","DOID:2780","MEDGEN:87517"],"synonyms":[{"name":"neoplasm of rectosigmoid junction","type":"exact"},{"name":"neoplasm of the rectosigmoid junction","type":"exact"},{"name":"rectosigmoid junction neoplasm (disease)","type":"exact"},{"name":"rectosigmoid junction tumor","type":"exact"},{"name":"rectosigmoid junction tumour","type":"exact"},{"name":"rectosigmoid neoplasm","type":"exact"},{"name":"rectosigmoid tumor","type":"exact"},{"name":"rectosigmoid tumour","type":"exact"},{"name":"tumor of rectosigmoid junction","type":"exact"},{"name":"tumor of the rectosigmoid junction","type":"exact"},{"name":"tumour of rectosigmoid junction","type":"exact"},{"name":"tumour of the rectosigmoid junction","type":"exact"}],"termid":"MONDO:0002423","xrefs":{"Monarch":{"xref_id":"0002423"}}}


id: PBO:0046800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VII","termid":"PBO:0046800"}


id: GO:0060478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The calcium ion regulated exocytosis which results in fusion of the acrosomal vesicle with the plasma membrane of the sperm as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acrosomal vesicle exocytosis","synonyms":[{"name":"acrosomal granule exocytosis","type":"related"},{"name":"acrosome exocytosis","type":"exact"}],"termid":"GO:0060478"}


id: GO:0008085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phototransduction, visible light, light adaptation (obsolete GO:0008085)","synonyms":[{"name":"phototransduction, visible light, light adaptation","type":"exact"}],"termid":"GO:0008085"}


id: GO:0061338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A heart process that modulates the propagation of the signal that causes the heart muscle to contract.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete atrioventricular node impulse conduction delay (obsolete GO:0061338)","synonyms":[{"name":"atrioventricular node impulse conduction delay","type":"exact"}],"termid":"GO:0061338"}


id: PBO:0048968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPALPP motifs containing 1","termid":"PBO:0048968"}


id: FYPO:0007204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an rDNA spacer replication fork barrier by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:18794373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"abolished rDNA spacer replication fork barrier binding","synonyms":[{"name":"abolished DNA binding at rDNA spacer replication fork barrier","type":"exact"}],"termid":"FYPO:0007204"}


id: PBO:0069841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1127, pseudogene","termid":"PBO:0069841"}


id: GO:0045866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of recombination within rDNA repeats (obsolete GO:0045866)","synonyms":[{"name":"positive regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045866"}


id: GO:0048289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to IgE biosynthesis, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and IgE constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:12370374","ISBN:0781735149","PMID:9186655","PMID:2113175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"isotype switching to IgE isotypes","synonyms":[{"name":"class switch recombination to IgE isotypes","type":"exact"},{"name":"class switching to IgE isotypes","type":"exact"},{"name":"isotype switch recombination to IgE isotypes","type":"exact"}],"termid":"GO:0048289"}


id: MONDO:1010819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, cattle","secondary_identifiers":["OMIA:000810-9913"],"termid":"MONDO:1010819","xrefs":{"Monarch":{"xref_id":"1010819"}}}


id: PBO:0090344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 family DNAJ domain protein Psi1","termid":"PBO:0090344"}


id: GO:0071212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An elaborate tubulolamellar membrane system that underlies the postsynaptic cell membrane.","definition_xrefs":["PMID:1460464","PMID:19244343","PMID:18171947","PMID:7946331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"type I terminal bouton","termid":"GO:0061174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"subsynaptic reticulum","synonyms":[{"name":"SSR","type":"exact"}],"termid":"GO:0071212"}


id: GO:1900844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of monodictyphenone biosynthetic process","termid":"GO:1900843"},{"relation_name":"negatively_regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"down regulation of monodictyphenone biosynthetic process","type":"exact"},{"name":"down-regulation of monodictyphenone biosynthetic process","type":"exact"},{"name":"downregulation of monodictyphenone biosynthetic process","type":"exact"}],"termid":"GO:1900844"}


id: PBO:0088356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase","termid":"PBO:0088356"}


id: MONDO:0012756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly characterized by developmental and language delays, mild intellectual disability, social impairments (autism spectrum disorders), mild variable dysmorphism and predisposition to obesity.","definition_xrefs":["Orphanet:261197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal 16p11.2 microdeletion syndrome","secondary_identifiers":["MEDGEN:461504","ICD9:758.39","GARD:10740","SCTID:699307007","UMLS:C3150154","OMIM:611913","MESH:C579850","NCIT:C120408","DOID:0070515","SCTID:718227006"],"synonyms":[{"name":"16p11.2 deletion syndrome","type":"related"},{"name":"Del(16)(p11.2)","type":"related"},{"name":"autism susceptibility 14A","type":"exact"},{"name":"autism, susceptibility to, 14A","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome, 593-KB","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome, 593kb","type":"exact"},{"name":"microdeletion 16p11.2","type":"related"},{"name":"monosomy 16p11.2","type":"related"},{"name":"proximal del(16)(p11.2)","type":"exact"},{"name":"proximal monosomy 16p11.2","type":"exact"}],"termid":"MONDO:0012756","xrefs":{"Monarch":{"xref_id":"0012756"}}}


id: PBO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERO1","termid":"PBO:0024873"}


id: PBO:0049989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2","termid":"PBO:0049989"}


id: PBO:0046158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR long non-coding downstream RNA","termid":"PBO:0046158"}


id: PBO:0049125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member B","termid":"PBO:0049125"}


id: FYPO:0002735
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[119657,119658,119659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not proceed normally through a specific cell cycle phase. A cell cycle phase is any of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormal cell cycle phase","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01956","SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0002735","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: FYPO:0001310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal viability in stationary phase","synonyms":[{"name":"normal cell population viability in stationary phase","type":"exact"},{"name":"normal chronological cell aging","type":"related"},{"name":"normal chronological lifespan","type":"related"}],"termid":"FYPO:0001310"}


id: PBO:0090399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Smn1/Gem1","termid":"PBO:0090399"}


id: PR:O13916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hcn1 gene.","definition_xrefs":["UniProtKB:O13916","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit hcn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.12","synonyms":[{"name":"20S cyclosome/APC complex protein hcn1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hcn1","type":"exact"},{"name":"chaperone-like protein hcn1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"high copy suppressor of cut9 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13916"}


id: PBO:0075918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 10","termid":"PBO:0075918"}


id: FYECO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown in glucose minimal medium to stationary phase followed by transfer to H2O and continued growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth to stationary phase","termid":"FYECO:0000158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase in rich medium followed by transfer to H2O","termid":"FYECO:0000157"}


id: GO:0070521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD82, a member of the tetraspan family.","definition_xrefs":["PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD82 complex","termid":"GO:0070521"}


id: PBO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 17 pseudogene","termid":"PBO:0042642"}


id: FYPO:0001038
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119782],"is_not":false,"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001038","terms_by_termid":{"FYPO:0001038":null}}


id: GO:0016712
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60880],"is_not":false,"summary":null,"term":"GO:0016712"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.14.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","references_by_uniquename":{"GO_REF:0000104":null},"secondary_identifiers":["GO:0008402","Reactome:R-HSA-194678","Reactome:R-HSA-211966","GO:0050381"],"synonyms":[{"name":"aryl hydrocarbon hydroxylase activity","type":"narrow"},{"name":"aryl-4-monooxygenase activity","type":"narrow"},{"name":"cytochrome P450 CYP19","type":"narrow"},{"name":"cytochrome p450 activity","type":"narrow"},{"name":"flavoprotein monooxygenase activity","type":"narrow"},{"name":"flavoprotein-linked monooxygenase activity","type":"narrow"},{"name":"microsomal P-450","type":"narrow"},{"name":"microsomal monooxygenase activity","type":"narrow"},{"name":"microsomal p450 activity","type":"narrow"},{"name":"substrate,reduced-flavoprotein:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)","type":"related"},{"name":"unspecific monooxygenase activity","type":"narrow"},{"name":"xenobiotic monooxygenase activity","type":"narrow"}],"termid":"GO:0016712","terms_by_termid":{"GO:0016712":null}}


id: PBO:0079285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 4","termid":"PBO:0079285"}


id: GO:1900394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of kojic acid biosynthetic process","synonyms":[{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"regulation of C6H6O4 anabolism","type":"related"},{"name":"regulation of C6H6O4 biosynthesis","type":"related"},{"name":"regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"regulation of C6H6O4 formation","type":"related"},{"name":"regulation of C6H6O4 synthesis","type":"related"},{"name":"regulation of kojic acid anabolism","type":"exact"},{"name":"regulation of kojic acid biosynthesis","type":"exact"},{"name":"regulation of kojic acid formation","type":"exact"},{"name":"regulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900394"}


id: PBO:0068244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 1","termid":"PBO:0068244"}


id: MONDO:0011214
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85905],"is_not":false,"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"Progressive familial intrahepatic cholestasis type 3 (PFIC3), a type of progressive familial intrahepatic cholestasis (PFIC), is a late-onset hereditary disorder in bile formation that is hepatocellular in origin. Onset may occur from infancy to young adulthood.","definition_xrefs":["Orphanet:79305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1201045","UMLS:C1865643","GARD:1289","MEDGEN:356333","icd11.foundation:1276600959","OMIM:602347","MESH:C535935","DOID:0070223"],"synonyms":[{"name":"ABCB4 progressive familial intrahepatic cholestasis","type":"exact"},{"name":"MDR3 Deficiency","type":"exact"},{"name":"Mdr3 deficiency","type":"related"},{"name":"PFIC3","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic 3","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 3","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, type 3","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, with elevated serum gamma-glutamyltransferase","type":"related"},{"name":"progressive familial intrahepatic cholestasis caused by mutation in ABCB4","type":"exact"},{"name":"progressive familial intrahepatic cholestasis with elevated serum gamma-glutamyltransferase","type":"related"}],"termid":"MONDO:0011214","terms_by_termid":{"MONDO:0011214":null},"xrefs":{"Monarch":{"xref_id":"0011214"}}}


id: PBO:0062495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 12","termid":"PBO:0062495"}


id: GO:1990411
data:
  {"annotated_genes":["SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111927],"is_not":false,"summary":null,"term":"GO:1990411"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hercynylcysteine sulfoxide + 2H+ = ergothioneine + pyruvate + ammonium.","definition_xrefs":["PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide lyase activity (ergothioneine-forming)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14428","RHEA:42688"],"termid":"GO:1990411","terms_by_termid":{"GO:1990411":null}}


id: FYPO:0004369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar phytochelatin level","synonyms":[{"name":"decreased level of phytochelatin in vacuole","type":"exact"},{"name":"decreased vacuolar phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar phytochelatin level during vegetative growth","type":"exact"},{"name":"reduced level of phytochelatin in vacuole","type":"exact"},{"name":"reduced vacuolar phytochelatin level","type":"exact"}],"termid":"FYPO:0004369"}


id: MONDO:0017447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital absence/hypoplasia of thumb is a rare developmental defect during embryogenesis characterized by underdevelopment of the thumb, ranging from a slight decrease in thumb size to complete absence of the thumb. The malformation may occur isolated, combined to other defects of the hand or upper limb, or as part of a multiple congenital anomaly syndrome.","definition_xrefs":["Orphanet:294988"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of thumb (obsolete MONDO:0017447)","synonyms":[{"name":"thumb hypodactyly","type":"exact"},{"name":"thumb oligodactyly","type":"exact"}],"termid":"MONDO:0017447","xrefs":{"Monarch":{"xref_id":"0017447"}}}


id: MONDO:0032603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly","termid":"MONDO:0020927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A9","secondary_identifiers":["GARD:18177","MEDGEN:1648428","OMIM:618219","UMLS:C4748721"],"synonyms":[{"name":"PAPA9","type":"related"},{"name":"POLYDACTYLY, POSTAXIAL, TYPE A9","type":"related"}],"termid":"MONDO:0032603","xrefs":{"Monarch":{"xref_id":"0032603"}}}


id: PBO:0054341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1734","termid":"PBO:0054341"}


id: GO:1900791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"shamixanthone metabolic process","synonyms":[{"name":"shamixanthone metabolism","type":"exact"}],"termid":"GO:1900791"}


id: PBO:0069049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 295, pseudogene","termid":"PBO:0069049"}


id: GO:0141048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to a lipid, where it acts as a marker for a membrane, recognized by the cellular apparatus to target the tagged protein for some cellular process such as autophagy.","definition_xrefs":["PMID:17632063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular tag activity","termid":"GO:0141047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane tag activity","synonyms":[{"name":"covalent modifier","type":"broad"},{"name":"lipid tag","type":"exact"}],"termid":"GO:0141048"}


id: GO:0043157
data:
  {"annotated_genes":["SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.","definition_xrefs":["PMID:14762213","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cation stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043157","terms_by_termid":{"GO:0071473":null}}


id: MOD:01599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-118 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01599"}


id: MONDO:0007763
data:
  {"annotated_genes":["SJAG_03787","SJAG_02231","SJAG_00440"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87138,87139,87140],"is_not":false,"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_02231":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"nonpapillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:144700","DOID:0050387"],"synonyms":[{"name":"CCRCC","type":"narrow"},{"name":"RCC","type":"related"},{"name":"adenocarcinoma of kidney","type":"related"},{"name":"clear cell renal cell adenocarcinoma","type":"narrow"},{"name":"clear cell renal cell carcinoma","type":"narrow"},{"name":"hypernephroma","type":"related"},{"name":"nonpapillary renal carcinoma 1 locus","type":"related"},{"name":"renal carcinoma, chromophobe, somatic","type":"exact"},{"name":"renal cell carcinoma","type":"broad"},{"name":"renal cell carcinoma, clear cell","type":"exact"},{"name":"renal cell carcinoma, clear cell, somatic","type":"exact"},{"name":"renal cell carcinoma, nonpapillary","type":"related"},{"name":"renal cell carcinoma, somatic","type":"exact"}],"termid":"MONDO:0007763","terms_by_termid":{"MONDO:0007763":null},"xrefs":{"Monarch":{"xref_id":"0007763"}}}


id: SO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Seven nucleotide recombination site (e.g. CACAGTG), part of V-gene, D-gene or J-gene recombination feature of an immunoglobulin or T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","synonyms":[{"name":"HEPTAMER","type":"related"},{"name":"heptamer of recombination feature of vertebrate immune system gene","type":"exact"}],"termid":"SO:0000561"}


id: PBO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2 (predicted)","termid":"PBO:0002207"}


id: PBO:0026632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K4_methylation","termid":"PBO:0026632"}


id: MONDO:0003408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor that arises from the ovary and is characterized by the presence of malignant germ cell components but lacks a teratoma component.","definition_xrefs":["NCIT:C39986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian primitive germ cell tumor","secondary_identifiers":["MEDGEN:275291","UMLS:C1518727","DOID:5351"],"synonyms":[{"name":"ovarian primitive germ cell tumor","type":"exact"}],"termid":"MONDO:0003408","xrefs":{"Monarch":{"xref_id":"0003408"}}}


id: PR:Q9HGN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12380:SF10","OMA:SCHPO03260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.07","secondary_identifiers":["UniProtKB:Q9HGN3"],"synonyms":[{"name":"Spom972h-STX6","type":"exact"},{"name":"syntaxin tlg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGN3"}


id: PBO:0043603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectin subfamily member 12","termid":"PBO:0043603"}


id: SO:0000629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An open reading frame found within the 5' UTR that can be translated and stall the translation of the downstream open reading frame.","definition_xrefs":["PMID:12890013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"five_prime_UTR","termid":"SO:0000204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_open_reading_frame","synonyms":[{"name":"five prime open reading frame","type":"exact"}],"termid":"SO:0000629"}


id: MONDO:0044807
data:
  {"annotated_genes":["SJAG_03098","SJAG_03900","SJAG_00690","SJAG_03551","SJAG_04003","SJAG_01942","SJAG_03275","SJAG_01772","SJAG_02210","SJAG_02680","SJAG_04840","SJAG_02007","SJAG_01598","SJAG_03244","SJAG_01236","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[85814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[86944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025691"},{"annotations":[86409,86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030486"},{"annotations":[86449,86450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030513"},{"annotations":[87301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030958"},{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957385"},{"annotations":[85424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[87373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[87465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"},{"annotations":[86631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[86483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"},{"annotations":[85575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007493"},{"annotations":[86209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","definition":"An instance of dystonic disorder that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01236":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_01942":null,"SJAG_02007":null,"SJAG_02210":null,"SJAG_02680":null,"SJAG_03098":null,"SJAG_03244":null,"SJAG_03275":null,"SJAG_03551":null,"SJAG_03900":null,"SJAG_04003":null,"SJAG_04840":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"inherited dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680022","Orphanet:391799","NANDO:1200511","GARD:21630","MEDGEN:1842468","NCIT:C35527","OMIMPS:128100"],"synonyms":[{"name":"familial dystonia","type":"exact"},{"name":"hereditary dystonic disorder","type":"exact"},{"name":"rare genetic dystonia","type":"exact"},{"name":"rare genetic dystonic disorder","type":"exact"}],"termid":"MONDO:0044807","terms_by_termid":{"MONDO:0007493":null,"MONDO:0007495":null,"MONDO:0010334":null,"MONDO:0010747":null,"MONDO:0012994":null,"MONDO:0014557":null,"MONDO:0014889":null,"MONDO:0015003":null,"MONDO:0025691":null,"MONDO:0030486":null,"MONDO:0030513":null,"MONDO:0030676":null,"MONDO:0030958":null,"MONDO:0957385":null},"xrefs":{"Monarch":{"xref_id":"0044807"}}}


id: PBO:0046035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 3","termid":"PBO:0046035"}


id: MONDO:0006807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rupture in the wall of the small or large intestine due to traumatic or pathologic processes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal perforation","secondary_identifiers":["MESH:D007416","NCIT:C39611","DOID:2074","MEDGEN:9525","EFO:1000987","SCTID:56905009","ICD9:777.6","UMLS:C0021845","ICD9:569.83","MedDRA:10022694"],"synonyms":[{"name":"bowel perforation","type":"exact"},{"name":"perforation of intestine","type":"exact"}],"termid":"MONDO:0006807","xrefs":{"Monarch":{"xref_id":"0006807"}}}


id: PBO:0027988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_abnormal_septum_morphology,_enlarged_nucleus","termid":"PBO:0027988"}


id: PBO:0039940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 3A","termid":"PBO:0039940"}


id: SO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primarily found in animals, the terminal inverted repeat (TIR) transposon superfamily piggyBac elements favour insertion adjacent to TTAA.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac_TIR_transposon","synonyms":[{"name":"DTB transposon","type":"exact"},{"name":"PiggyBac transposable element","type":"exact"},{"name":"piggyBac TIR transposon","type":"exact"}],"termid":"SO:0002283"}


id: GO:0009982
data:
  {"annotated_genes":["SJAG_03572","SJAG_04754","SJAG_01172","SJAG_02978","SJAG_00088","SJAG_04065","SJAG_00319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76004],"is_not":false,"summary":null,"term":"GO:0009982"},{"annotations":[106607,114688,95720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[112880,114689,95024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"},{"annotations":[106608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[102856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in RNA = a pseudouridine in RNA. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:48348","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786583","Reactome:R-HSA-6787566","Reactome:R-HSA-6790905","Reactome:R-HSA-6782381","Reactome:R-HSA-8870289","GO:0016439"],"termid":"GO:0009982","terms_by_termid":{"GO:0009982":null,"GO:0106029":null,"GO:0106032":null,"GO:0160148":null,"GO:0160150":null}}


id: PBO:0073005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 4","termid":"PBO:0073005"}


id: PBO:0042787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 152","termid":"PBO:0042787"}


id: GO:1900708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of tensidol A biosynthetic process","termid":"GO:1900707"},{"relation_name":"negatively_regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of tensidol A biosynthetic process","synonyms":[{"name":"down regulation of tensidol A anabolism","type":"exact"},{"name":"down regulation of tensidol A biosynthesis","type":"exact"},{"name":"down regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down regulation of tensidol A formation","type":"exact"},{"name":"down regulation of tensidol A synthesis","type":"exact"},{"name":"down-regulation of tensidol A anabolism","type":"exact"},{"name":"down-regulation of tensidol A biosynthesis","type":"exact"},{"name":"down-regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down-regulation of tensidol A formation","type":"exact"},{"name":"down-regulation of tensidol A synthesis","type":"exact"},{"name":"downregulation of tensidol A anabolism","type":"exact"},{"name":"downregulation of tensidol A biosynthesis","type":"exact"},{"name":"downregulation of tensidol A biosynthetic process","type":"exact"},{"name":"downregulation of tensidol A formation","type":"exact"},{"name":"downregulation of tensidol A synthesis","type":"exact"},{"name":"inhibition of tensidol A anabolism","type":"exact"},{"name":"inhibition of tensidol A biosynthesis","type":"exact"},{"name":"inhibition of tensidol A biosynthetic process","type":"narrow"},{"name":"inhibition of tensidol A formation","type":"exact"},{"name":"inhibition of tensidol A synthesis","type":"exact"},{"name":"negative regulation of tensidol A anabolism","type":"exact"},{"name":"negative regulation of tensidol A biosynthesis","type":"exact"},{"name":"negative regulation of tensidol A formation","type":"exact"},{"name":"negative regulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900708"}


id: GO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vestibulocochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve formation","synonyms":[{"name":"CN VII formation","type":"related"}],"termid":"GO:0021650"}


id: SO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of a conserved sequence located about 75-bp upstream of the start point of eukaryotic transcription units which may be involved in RNA polymerase binding; consensus=GG(C|T)CAATCT.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAT_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/CAAT_box"],"synonyms":[{"name":"CAAT box","type":"exact"},{"name":"CAAT signal","type":"exact"},{"name":"CAAT-box","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:CAAT_signal","type":"exact"}],"termid":"SO:0000172"}


id: GO:0102874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-16:0-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-16:0-2-18:3-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:17064923"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102874)","termid":"GO:0102874"}


id: PBO:0042328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD48 molecule","termid":"PBO:0042328"}


id: PBO:0111328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Nop58","termid":"PBO:0111328"}


id: MONDO:0011039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophia maculosa varioliformis cutis, familial","secondary_identifiers":["MESH:C563349","OMIM:601341","UMLS:C1832465","MEDGEN:371334"],"synonyms":[{"name":"AMVC","type":"related"},{"name":"atrophia MACULOSA VARIOLIFORMIS cutis, familial","type":"related"},{"name":"atrophia maculosa varioliformis cutis, familial","type":"exact"},{"name":"varioliform macular atrophy of the skin","type":"related"}],"termid":"MONDO:0011039","xrefs":{"Monarch":{"xref_id":"0011039"}}}


id: GO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription by galactose","termid":"GO:0000410"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by galactose","termid":"GO:0000431"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription from RNA polymerase II promoter","termid":"GO:0000437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter by galactose","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by galactose","type":"narrow"}],"termid":"GO:0000434"}


id: GO:0099511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Regulation of cytosolic calcium ion concentrations via the directed movement of calcium ions across the plasma-membrane into the cytosol via the action of a voltage-gated calcium ion channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels","termid":"GO:0099511"}


id: PBO:0068082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 388","termid":"PBO:0068082"}


id: MONDO:1011254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive rod-cone degeneration that occurs in dogs due to a mutation in the PDE6A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, PDE6A-related, dog","secondary_identifiers":["OMIA:001314-9615"],"synonyms":[{"name":"retinal atrophy - rod-cone dysplasia 3, PDE6A-related, dog","type":"related"}],"termid":"MONDO:1011254","xrefs":{"Monarch":{"xref_id":"1011254"}}}


id: PBO:0078279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 12-1","termid":"PBO:0078279"}


id: PBO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt3 (predicted)","termid":"PBO:0005755"}


id: PBO:0056053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor","termid":"PBO:0056053"}


id: MONDO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal enlargement of the heart resulting from long-standing hypertension.","definition_xrefs":["NCIT:C4907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertensive heart disease","secondary_identifiers":["MEDGEN:508889","SCTID:64715009","UMLS:C0152105","ICD9:402.9","icd11.foundation:1210166201","DOID:11516","ICD9:402"],"synonyms":[{"name":"hypertensive cardiomegaly","type":"related"},{"name":"hypertensive cardiopathy","type":"related"},{"name":"hypertensive cardiovascular disease","type":"related"},{"name":"hypertensive heart disease","type":"exact"}],"termid":"MONDO:0001302","xrefs":{"Monarch":{"xref_id":"0001302"}}}


id: PBO:0090838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH tandem zinc finger protein, human Tristetraprolin homolog Zfs1, involved in mRNA catabolism","termid":"PBO:0090838"}


id: GO:0090538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a peptide pheromone from a cell.","definition_xrefs":["GOC:vw","GOC:al","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide pheromone export","termid":"GO:0000770"},{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"peptide pheromone secretion","termid":"GO:0090538"}


id: PBO:0066499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin, lipid raft linker 1","termid":"PBO:0066499"}


id: MONDO:0008264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic kidney disease that causes progressive loss of kidney function caused by mutations in the genes encoding uromodulin (UMOD), hepatocyte nuclear factor-1β (HNF1B), renin (REN), or mucin-1 (MUC1).","definition_xrefs":["GARD:0010801","PMID:25738250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","secondary_identifiers":["UMLS:C4511620","MEDGEN:1377523","SCTID:444699000","GARD:10801","icd11.foundation:216863438","MESH:C536137","Orphanet:34149"],"synonyms":[{"name":"ADTKD","type":"exact"},{"name":"MCKD","type":"related"},{"name":"autosomal dominant interstitial kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease","type":"related"},{"name":"medullary cystic disease","type":"related"},{"name":"medullary cystic kidney disease","type":"related"},{"name":"polycystic kidneys, medullary type","type":"related"}],"termid":"MONDO:0008264","xrefs":{"Monarch":{"xref_id":"0008264"}}}


id: GO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000474"}


id: MONDO:0041447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The spread of a malignant neoplasm to the colon. This may be from a primary large intestine malignant neoplasm, or from a malignant neoplasm at a distant site.","definition_xrefs":["NCIT:C8411"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the colon","secondary_identifiers":["UMLS:C0346974","MEDGEN:83432"],"synonyms":[{"name":"metastatic malignant neoplasm in the colon","type":"exact"},{"name":"metastatic malignant neoplasm to the colon","type":"exact"},{"name":"metastatic neoplasm to the colon","type":"exact"},{"name":"metastatic tumor to the colon","type":"exact"},{"name":"metastatic tumour to the colon","type":"exact"}],"termid":"MONDO:0041447","xrefs":{"Monarch":{"xref_id":"0041447"}}}


id: PBO:0078262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 1-1","termid":"PBO:0078262"}


id: MONDO:0004846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vaginal bleeding preceding the 20th week of gestation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental abruption","secondary_identifiers":["NCIT:C26685","EFO:1001754","ICD9:641.20","DOID:9667","MEDGEN:49","HP:0011419","SCTID:415105001","UMLS:C0000832","ICD9:640.0","ICD9:640.03","MESH:D000037"],"synonyms":[{"name":"Abruptio placentae, premature separation of placenta","type":"exact"},{"name":"abruptio placenta","type":"exact"},{"name":"abruptio placentae","type":"exact"},{"name":"placental abruption","type":"exact"},{"name":"placental abruption (disease)","type":"exact"},{"name":"premature separation of placenta","type":"exact"}],"termid":"MONDO:0004846","xrefs":{"Monarch":{"xref_id":"0004846"}}}


id: GO:0047187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deacetyl-[citrate-oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + S-acetylphosphopantetheine = [citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + pantetheine 4'-phosphate.","definition_xrefs":["MetaCyc:2.3.1.49-RXN","EC:2.3.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"deacetyl-[citrate-(pro-3S)-lyase] S-acetyltransferase activity","secondary_identifiers":["RHEA:20393"],"synonyms":[{"name":"S-acetyl phosphopantetheine:deacetyl citrate lyase S-acetyltransferase activity","type":"related"},{"name":"S-acetylphosphopantetheine:deacetyl-citrate-oxaloacetate-lyase((pro-3S)-CH2COO-rightacetate)S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase acetyltransferase activity","type":"related"}],"termid":"GO:0047187"}


id: GO:0097347
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterooligomeric protein complex that spans the bacterial periplasm and enables the secretion of adhesin proteins in Gram-negative bacteria. In Citrobacter rodentium, Salmonella enterica and Escherichia coli, the TAM complex consists of an Omp85-family protein, TamA, in the outer membrane and TamB in the inner membrane.","definition_xrefs":["PMID:22466966","GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TAM protein secretion complex","synonyms":[{"name":"translocation and assembly module protein complex","type":"exact"}],"termid":"GO:0097347"}


id: MONDO:0006948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occlusion of the retinal artery.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular occlusion","termid":"MONDO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal artery occlusion","secondary_identifiers":["UMLS:C0035302","NCIT:C34978","SCTID:232035005","DOID:8483","MedDRA:10038827","EFO:1001154","MEDGEN:11208","MESH:D015356"],"termid":"MONDO:0006948","xrefs":{"Monarch":{"xref_id":"0006948"}}}


id: FYPO:0001875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","termid":"FYPO:0001874"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","synonyms":[{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"decreased occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001875"}


id: PBO:0083032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta-1-pyrroline-5-carboxylate dehydrogenase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; deficiency of human homolog ALDH4A1 causes type II hyperprolinemia (HPII), an autosomal recessive inborn error of metabolism; human homolog ALDH4A1 can complement yeast null mutant","termid":"PBO:0083032"}


id: PBO:0053190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptin receptor overlapping transcript like 1","termid":"PBO:0053190"}


id: MONDO:1011142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, horse","secondary_identifiers":["OMIA:001764-9796"],"termid":"MONDO:1011142","xrefs":{"Monarch":{"xref_id":"1011142"}}}


id: GO:0052851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe3+-siderophore + NADP+ + H+ -> 2 Fe2+-siderophore + NADPH.","definition_xrefs":["RHEA:28795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-chelate reductase activity","termid":"GO:0000293"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ferric-chelate reductase (NADPH) activity","secondary_identifiers":["Reactome:R-HSA-917811","EC:1.16.1.9","MetaCyc:RXN0-6555","KEGG_REACTION:R09541"],"synonyms":[{"name":"ferric chelate reductase activity","type":"broad"},{"name":"ferric reductase, NADPH-dependent activity","type":"exact"},{"name":"iron chelate reductase activity","type":"broad"}],"termid":"GO:0052851"}


id: GO:0031834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurokinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neurokinin receptor binding","synonyms":[{"name":"neurokinin receptor ligand","type":"narrow"}],"termid":"GO:0031834"}


id: PBO:0073871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member C1","termid":"PBO:0073871"}


id: PBO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript_level","termid":"PBO:0031214"}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: PBO:0054729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2138","termid":"PBO:0054729"}


id: GO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate catabolic process","termid":"GO:0009131"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009175"}


id: PBO:0079388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III","termid":"PBO:0079388"}


id: MONDO:0100586
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012282"},{"annotations":[86392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014139"},{"annotations":[87099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010075"}]},"cv_name":"mondo","definition":"Any congenital disorder of glycosylation in which the cause of the disease is a mutation in B3GALT6.","definition_xrefs":["PMID:30740740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"B3GALT6-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"B3GALT6-CDG","type":"exact"},{"name":"B3GALT6-congenital disorder of glycosylation","type":"exact"},{"name":"B3GALT6-related congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100586","terms_by_termid":{"MONDO:0010075":null,"MONDO:0012282":null,"MONDO:0014139":null},"xrefs":{"Monarch":{"xref_id":"0100586"}}}


id: PBO:0003185
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.2","termid":"PBO:0003185"}


id: GO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the optic placode over time, from its formation to the mature structure. During embryonic stage 12 the placode starts to invaginate, forming a pouch. Cells that will form Bolwig's organ segregate from the ventral lip of this pouch, remaining in the head epidermis. The remainder of the invagination loses contact with the outer surface and becomes the optic lobe. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:8402833","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium development","secondary_identifiers":["GO:0048049"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor development","type":"exact"},{"name":"optic lobe placode development","type":"exact"},{"name":"optic placode development","type":"broad"}],"termid":"GO:0001748"}


id: PBO:0083895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; forms a stable association with Nup82p, Gle2p and two other FG-nucleoporins (Nsp1p and Nup159p); NUP116 has a paralog, NUP100, that arose from the whole genome duplication","termid":"PBO:0083895"}


id: PBO:0112604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN signalling GTPase Spg1","termid":"PBO:0112604"}


id: PBO:0068404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 223","termid":"PBO:0068404"}


id: MONDO:1012895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited macrothrombocytopenia that occurs in dogs due to a mutation in the TUBB1 gene.","definition_xrefs":["PMID:18466252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, dog","termid":"MONDO:1010659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, TUBB1-related, dog","secondary_identifiers":["OMIA:002434-9615"],"termid":"MONDO:1012895","xrefs":{"Monarch":{"xref_id":"1012895"}}}


id: PBO:0058793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7162","termid":"PBO:0058793"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: GO:0061076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural retina development","termid":"GO:0061074"},{"relation_name":"is_a","term_name":"negative regulation of retina development in camera-type eye","termid":"GO:1902867"},{"relation_name":"negatively_regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural retina development","termid":"GO:0061076"}


id: GO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["PMID:25896388","GOC:dph","GOC:ik"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclic pyranopterin monophosphate synthase activity","secondary_identifiers":["RHEA:49580","EC:4.6.1.17","MetaCyc:RXN-17809"],"termid":"GO:0061799"}


id: PR:O59825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G/U mismatch-specific uracil DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.05c","synonyms":[{"name":"Spom972h-thp1","type":"exact"},{"name":"uracil mismatch repair protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59825"}


id: SO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon flanked by long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_retrotransposon","synonyms":[{"name":"LTR retrotransposon","type":"exact"},{"name":"long terminal repeat retrotransposon","type":"exact"}],"termid":"SO:0000186"}


id: PBO:0081147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP69 zinc finger protein","termid":"PBO:0081147"}


id: GO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Conversion of vitamin D3 from its largely inactive form (calciol, also called cholecalciferol) into a hormonally active form (calcitriol). Conversion requires 25-hydroxylation of calciol in the liver to form calcidiol, and subsequent 1,alpha-hydroxylation of calcidiol in the kidney to form calcitriol.","definition_xrefs":["GOC:rl","PMID:20511049","GOC:BHF","PMID:17426122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"calcitriol biosynthetic process from calciol","synonyms":[{"name":"1alpha,25(OH)2D3 biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxycholecalciferol biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxyvitamin D3 biosynthesis","type":"broad"},{"name":"calcitriol biosynthesis from calciol","type":"exact"},{"name":"vitamin D3 activation","type":"exact"}],"termid":"GO:0036378"}


id: PBO:0079277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 1","termid":"PBO:0079277"}


id: GO:1903799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microRNA processing.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GO_REF:0000058","PMID:22269326","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of miRNA-mediated gene silencing","termid":"GO:0060965"},{"relation_name":"is_a","term_name":"regulation of miRNA processing","termid":"GO:1903798"},{"relation_name":"negatively_regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA processing","synonyms":[{"name":"down regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"down regulation of miRNA biogenesis","type":"related"},{"name":"down regulation of miRNA processing","type":"exact"},{"name":"down regulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"down regulation of microRNA biogenesis","type":"related"},{"name":"down regulation of microRNA biosynthesis","type":"related"},{"name":"down regulation of microRNA biosynthetic process","type":"related"},{"name":"down regulation of microRNA metabolic process","type":"related"},{"name":"down regulation of microRNA metabolism","type":"related"},{"name":"down regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"down regulation of production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"},{"name":"down-regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"down-regulation of miRNA biogenesis","type":"related"},{"name":"down-regulation of miRNA processing","type":"exact"},{"name":"down-regulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"down-regulation of microRNA biogenesis","type":"related"},{"name":"down-regulation of microRNA biosynthesis","type":"related"},{"name":"down-regulation of microRNA biosynthetic process","type":"related"},{"name":"down-regulation of microRNA metabolic process","type":"related"},{"name":"down-regulation of microRNA metabolism","type":"related"},{"name":"down-regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"down-regulation of production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"},{"name":"downregulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"downregulation of miRNA biogenesis","type":"related"},{"name":"downregulation of miRNA processing","type":"exact"},{"name":"downregulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"downregulation of microRNA biogenesis","type":"related"},{"name":"downregulation of microRNA biosynthesis","type":"related"},{"name":"downregulation of microRNA biosynthetic process","type":"related"},{"name":"downregulation of microRNA metabolic process","type":"related"},{"name":"downregulation of microRNA metabolism","type":"related"},{"name":"downregulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"downregulation of production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"},{"name":"inhibition of gene silencing by miRNA, production of miRNAs","type":"narrow"},{"name":"inhibition of miRNA biogenesis","type":"related"},{"name":"inhibition of miRNA processing","type":"narrow"},{"name":"inhibition of miRNA-mediated gene silencing, production of miRNAs","type":"narrow"},{"name":"inhibition of microRNA biogenesis","type":"related"},{"name":"inhibition of microRNA biosynthesis","type":"related"},{"name":"inhibition of microRNA biosynthetic process","type":"related"},{"name":"inhibition of microRNA metabolic process","type":"related"},{"name":"inhibition of microRNA metabolism","type":"related"},{"name":"inhibition of microRNA-mediated gene silencing, production of microRNAs","type":"narrow"},{"name":"inhibition of production of miRNAs involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of production of microRNAs involved in gene silencing by microRNA","type":"narrow"},{"name":"negative regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"negative regulation of miRNA biogenesis","type":"related"},{"name":"negative regulation of miRNA maturation","type":"narrow"},{"name":"negative regulation of miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"negative regulation of microRNA biogenesis","type":"related"},{"name":"negative regulation of microRNA biosynthesis","type":"related"},{"name":"negative regulation of microRNA biosynthetic process","type":"related"},{"name":"negative regulation of microRNA metabolic process","type":"related"},{"name":"negative regulation of microRNA metabolism","type":"related"},{"name":"negative regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"negative regulation of production of miRNAs involved in gene silencing by miRNA","type":"related"},{"name":"negative regulation of production of microRNAs involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1903799"}


id: PR:P0CT77
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1101 gene.","definition_xrefs":["UniProtKB:P0CT77","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.07c","synonyms":[{"name":"Spom972h-rpl1101","type":"exact"}],"termid":"PR:P0CT77"}


id: PR:O74786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.02c","synonyms":[{"name":"Spom972h-sec9","type":"exact"}],"termid":"PR:O74786"}


id: PR:O14249
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ABHD4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin-specific deacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.03c","secondary_identifiers":["UniProtKB:O14249"],"synonyms":[{"name":"Spom972h-ABHD4","type":"exact"}],"termid":"PR:O14249"}


id: PBO:0060878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEMP2 divergent transcript","termid":"PBO:0060878"}


id: GO:0012508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances from the Golgi to the ER.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"},{"relation_name":"part_of","term_name":"COPI-coated Golgi to ER transport vesicle","termid":"GO:0030142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi to ER transport vesicle membrane","synonyms":[{"name":"Golgi to ER constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"Golgi to endoplasmic reticulum transport vesicle membrane","type":"exact"},{"name":"Golgi-ER transport vesicle membrane","type":"exact"},{"name":"Golgi-endoplasmic reticulum transport vesicle membrane","type":"exact"}],"termid":"GO:0012508"}


id: MONDO:0020404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital cardiovascular abnormality characterized by the presence of subvalvar left ventricular outflow tract obstruction, coarctation of the aorta, and mitral stenosis.","definition_xrefs":["NCIT:C99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shone complex","secondary_identifiers":["ICD9:746.84","GARD:19630","MEDGEN:501135","SCTID:41371000119100","UMLS:C1868705","MedDRA:10066802","Orphanet:99063"],"synonyms":[{"name":"shone syndrome","type":"exact"},{"name":"shone's syndrome (greater than 3 sites)","type":"exact"}],"termid":"MONDO:0020404","xrefs":{"Monarch":{"xref_id":"0020404"}}}


id: MONDO:0017758
data:
  {"annotated_genes":["SJAG_04425","SJAG_04042","SJAG_01616","SJAG_03447","SJAG_01199","SJAG_03362","SJAG_03712","SJAG_04459","SJAG_00835","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[87004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013761"},{"annotations":[85704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[85635,85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[85612,85611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[86220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[87040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"},{"annotations":[87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_03362":null,"SJAG_03447":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of vitamin and non-protein cofactor absorption and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309827","GARD:21350","UMLS:C5681037","icd11.foundation:1112006621","MEDGEN:1842689"],"synonyms":[{"name":"disorder of vitamin and non-protein cofactor absorption and transport","type":"exact"}],"termid":"MONDO:0017758","terms_by_termid":{"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0011790":null,"MONDO:0013382":null,"MONDO:0013761":null,"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0017758"}}}


id: PBO:0018023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter, predicted Meu22","termid":"PBO:0018023"}


id: FYECO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which linoleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ linoleic acid","termid":"FYECO:0000050"}


id: PBO:0086648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086648"}


id: PBO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 1","termid":"PBO:0061079"}


id: FYECO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which silver nanoparticles were added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:29294138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AgNP","synonyms":[{"name":"+ silver nanoparticles","type":"exact"}],"termid":"FYECO:0000353"}


id: GO:0050769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"is_a","term_name":"positive regulation of nervous system development","termid":"GO:0051962"},{"relation_name":"positively_regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurogenesis","synonyms":[{"name":"activation of neurogenesis","type":"narrow"},{"name":"stimulation of neurogenesis","type":"narrow"},{"name":"up regulation of neurogenesis","type":"exact"},{"name":"up-regulation of neurogenesis","type":"exact"},{"name":"upregulation of neurogenesis","type":"exact"}],"termid":"GO:0050769"}


id: PBO:0066086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0066086"}


id: GO:0050031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-pipecolate + O2 = 2,3,4,5-tetrahydropyridine-2-carboxylate + H2O2 + H+. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["EC:1.5.3.7","RHEA:11992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-pipecolate oxidase activity","secondary_identifiers":["MetaCyc:L-PIPECOLATE-OXIDASE-RXN","Reactome:R-HSA-6783880","KEGG_REACTION:R02204"],"synonyms":[{"name":"L-pipecolate:oxygen 1,6-oxidoreductase activity","type":"related"},{"name":"L-pipecolic acid oxidase activity","type":"related"}],"termid":"GO:0050031"}


id: PBO:0065351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 1","termid":"PBO:0065351"}


id: GO:0120136
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118425],"is_not":false,"summary":null,"term":"GO:0120136"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dUMP = ADP + dUDP.","definition_xrefs":["PMID:3010881","RHEA:30655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside phosphate kinase activity, ATP as phosphate donor","termid":"GO:0047507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"dUMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP:dUMP phosphotransferase activity","type":"exact"},{"name":"dUMP-kinase activity","type":"exact"},{"name":"deoxyuridine monophosphate kinase activity","type":"exact"}],"termid":"GO:0120136","terms_by_termid":{"GO:0120136":null}}


id: PBO:0062966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 9","termid":"PBO:0062966"}


id: PBO:0069967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1262, pseudogene","termid":"PBO:0069967"}


id: MONDO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by the presence of a growing mature teratoma in a patient during or after chemotherapy for a non-seminomatous germ cell tumor, with normal serum markers for human chorionic gonadotropin and alpha fetoprotein. Complete surgical resection is the preferred treatment.","definition_xrefs":["NCIT:C118370"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growing teratoma syndrome","secondary_identifiers":["Orphanet:314613","GARD:21380","MEDGEN:856083","UMLS:C3891714"],"synonyms":[{"name":"GTS","type":"exact"}],"termid":"MONDO:0017807","xrefs":{"Monarch":{"xref_id":"0017807"}}}


id: GO:0048557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"},{"relation_name":"part_of","term_name":"embryonic digestive tract development","termid":"GO:0048566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic digestive tract morphogenesis","secondary_identifiers":["GO:0048558"],"synonyms":[{"name":"embryonic gut morphogenesis","type":"broad"}],"termid":"GO:0048557"}


id: PBO:0002933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase (predicted)","termid":"PBO:0002933"}


id: PBO:0059375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21","termid":"PBO:0059375"}


id: PBO:0060255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN opposite strand","termid":"PBO:0060255"}


id: MONDO:0013683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 5","secondary_identifiers":["OMIM:614318","MEDGEN:482070","UMLS:C3280440","GARD:18422"],"synonyms":[{"name":"VUR5","type":"exact"},{"name":"vesicoureteral reflux 5","type":"exact"}],"termid":"MONDO:0013683","xrefs":{"Monarch":{"xref_id":"0013683"}}}


id: PBO:0086230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Arp2/3 complex; interacts with Arp2/3 complex to stimulate actin filament debranching and inhibit actin nucleation; has similarity to Cof1p and also to human glia maturation factor (GMF); null mutant displays elevated mitochondrial genome loss","termid":"PBO:0086230"}


id: PBO:0083757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential evolutionarily-conserved nucleolar protein; component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects","termid":"PBO:0083757"}


id: GO:0071453
data:
  {"annotated_genes":["SJAG_03345","SJAG_00221","SJAG_04018","SJAG_00642","SJAG_01150","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110232,101582,112099,117377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[116782,89618],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to oxygen","type":"related"}],"termid":"GO:0071453","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: FYPO:0006481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin ssDNA (lagging strand) loading is increased during the mitotic cell cycle. Cohesin ssDNA (lagging strand) loading is the topological linking of a cohesin ring complex to single-stranded DNA, i.e. the lagging strand, in chromatin.","definition_xrefs":["PomBase:mah","GO:0062022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"increased mitotic cohesin ssDNA (lagging strand) loading","synonyms":[{"name":"increased cohesin ssDNA (lagging strand) loading during mitotic cell cycle","type":"exact"},{"name":"increased cohesin ssDNA (lagging strand) loading during vegetative growth","type":"exact"},{"name":"increased mitotic cohesin association with ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased mitotic cohesin localization to ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased second-DNA capture","type":"exact"}],"termid":"FYPO:0006481"}


id: GO:1902501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a lysosomal membrane.","definition_xrefs":["GOC:TermGenie","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar HOPS complex","termid":"GO:1902500"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lysosomal HOPS complex","synonyms":[{"name":"lysosomal membrane HOPS complex","type":"exact"}],"termid":"GO:1902501"}


id: PBO:0034248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_orthology_relationship_with","termid":"PBO:0034248"}


id: MONDO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-dystrophic myopathy with collagen 6 anomaly (obsolete MONDO:0016111)","secondary_identifiers":["Orphanet:206659"],"termid":"MONDO:0016111","xrefs":{"Monarch":{"xref_id":"0016111"}}}


id: PBO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 3","termid":"PBO:0071770"}


id: GO:0140563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine.","definition_xrefs":["PMID:30127001","EC:2.4.2.42","RHEA:56064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase activity","termid":"GO:0140563"}


id: PBO:0077429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167A","termid":"PBO:0077429"}


id: PBO:0072500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 29","termid":"PBO:0072500"}


id: GO:0031291
data:
  {"annotated_genes":["SJAG_02520","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105433,111401],"is_not":false,"summary":null,"term":"GO:0031291"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Ran subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02520":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Ran protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031291","terms_by_termid":{"GO:0031291":null}}


id: GO:0033910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltotetraose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltotetraohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.60-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltotetraohydrolase activity","type":"related"},{"name":"G4-amylase activity","type":"related"},{"name":"exo-maltotetraohydrolase activity","type":"related"},{"name":"glucan 1,4-alpha-maltotetrahydrolase activity","type":"related"},{"name":"maltotetraose-forming amylase activity","type":"related"}],"termid":"GO:0033910"}


id: PBO:0056866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 2","termid":"PBO:0056866"}


id: PBO:0068247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 4","termid":"PBO:0068247"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: GO:1905546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylpropanoid stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22700048","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phenylpropanoid","termid":"GO:1905546"}


id: GO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric connecting tubule over time, from its formation to the mature structure. The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric connecting tubule development","synonyms":[{"name":"metanephric connecting duct development","type":"exact"}],"termid":"GO:0072286"}


id: PBO:0113453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GID Complex that binds directly to central component Vid30p; GID complex is involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase; Gid7p contains six WD40 repeats; localizes to peroxisomes in oleate-growing cells; computational analysis suggests that Gid7p and Moh1p have similar functions","termid":"PBO:0113453"}


id: MONDO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Madelung disease, or deformity (MD) is a predominantly bilateral wrist anomaly characterized by shortened and bowed radii and long ulnae leading to dorsal dislocation of the distal ulna and limited mobility of the wrist and elbow.","definition_xrefs":["Orphanet:35688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leri-Weill dyschondrosteosis","termid":"MONDO:0007481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Madelung deformity","secondary_identifiers":["MESH:C562398","MedDRA:10007700","ICD9:755.54","UMLS:C0152441","icd11.foundation:1398663515","MEDGEN:57537","SCTID:4530000","GARD:12973"],"termid":"MONDO:0018154","xrefs":{"Monarch":{"xref_id":"0018154"}}}


id: GO:0052233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052233)","synonyms":[{"name":"positive aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052233"}


id: PBO:0091316
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP1","termid":"PBO:0091316"}


id: PBO:0061174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 4-1","termid":"PBO:0061174"}


id: GO:0071577
data:
  {"annotated_genes":["SJAG_01990","SJAG_02968","SJAG_04185","SJAG_01078","SJAG_00328","SJAG_00222","SJAG_01803","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78674],"is_not":false,"summary":null,"term":"GO:0071577"},{"annotations":[114732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[104538,113602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[94133,94132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[75110,104676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"A process in which a zinc II ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transport","termid":"GO:0006829"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02968":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-435354"],"synonyms":[{"name":"zinc II ion transmembrane transport","type":"exact"},{"name":"zinc ion membrane transport","type":"exact"},{"name":"zinc transmembrane transport","type":"exact"}],"termid":"GO:0071577","terms_by_termid":{"GO:0071577":null,"GO:0071578":null,"GO:0140147":null,"GO:0140209":null,"GO:1904257":null}}


id: MONDO:0021952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune progesterone dermatitis (APD) is primarily characterized by a recurrent skin rash that varies in severity depending on the phase of the menstrual cycle. The rash generally appears during the second half of the cycle when levels of the hormone, progesterone, begin to rise and it subsides shortly after menstruation. Although the exact underlying cause of APD is not well understood, it is thought to involve an abnormal immune reaction (autoimmune response) triggered by a woman's own progesterone. Depending on the severity of the condition, treatment may include topical (applied to the skin) medications, systemic corticosteroids, hormone therapy to suppress the production of progesterone, and/or surgical removal of the ovaries.","definition_xrefs":["GARD:0009139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune progesterone dermatitis","secondary_identifiers":["MESH:C535299","UMLS:C1260879","ICD9:708.8","MEDGEN:220359","SCTID:400009001"],"synonyms":[{"name":"APD","type":"related"},{"name":"autoimmune progesterone dermatitis","type":"exact"},{"name":"autoimmune progesterone dermatitis/urticaria","type":"exact"},{"name":"autoimmune progesterone urticaria","type":"related"},{"name":"progesterone dermatitis","type":"related"}],"termid":"MONDO:0021952","xrefs":{"Monarch":{"xref_id":"0021952"}}}


id: PBO:0077424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM161B divergent transcript","termid":"PBO:0077424"}


id: PBO:0041932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 3","termid":"PBO:0041932"}


id: PBO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp2 (predicted)","termid":"PBO:0005362"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["RHEA:25597","EC:4.2.99.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R08166","MetaCyc:RXN-9310"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: GO:2000464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"is_a","term_name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"},{"relation_name":"positively_regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of astrocyte chemotaxis","termid":"GO:2000464"}


id: GO:0080024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants.","definition_xrefs":["PMID:18725356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indolebutyric acid metabolic process","synonyms":[{"name":"IBA metabolic process","type":"exact"},{"name":"IBA metabolism","type":"exact"},{"name":"indole-3-butyric acid metabolic process","type":"narrow"}],"termid":"GO:0080024"}


id: FYPO:0003570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"}


id: PBO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(p12.1)","termid":"PBO:0047948"}


id: GO:0018070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphopantetheinylation of peptidyl-serine to form peptidyl-O-phosphopantetheine-L-serine.","definition_xrefs":["RESID:AA0150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"protein phosphopantetheinylation","termid":"GO:0018215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine phosphopantetheinylation","termid":"GO:0018070"}


id: GO:1902269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of polyamine transmembrane transport","termid":"GO:1902267"},{"relation_name":"positively_regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of polyamine transmembrane transport","synonyms":[{"name":"activation of polyamine transmembrane transport","type":"narrow"},{"name":"up regulation of polyamine transmembrane transport","type":"exact"},{"name":"up-regulation of polyamine transmembrane transport","type":"exact"},{"name":"upregulation of polyamine transmembrane transport","type":"exact"}],"termid":"GO:1902269"}


id: PBO:0112876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, with CRAL-TRIO domain Rga10","termid":"PBO:0112876"}


id: PBO:0051589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 20 receptor subunit alpha","termid":"PBO:0051589"}


id: PBO:0056846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-6-methylguanine-DNA methyltransferase","termid":"PBO:0056846"}


id: MONDO:0015716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moderately severe hemophilia B is a form of hemophilia B characterized by factor IX deficiency leading to abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"moderately severe hemophilia B","secondary_identifiers":["MEDGEN:1842225","GARD:17057","UMLS:C5679575"],"synonyms":[{"name":"moderately severe factor IX deficiency","type":"exact"},{"name":"moderately severe haemophilia type B","type":"exact"},{"name":"moderately severe hemophilia type B","type":"exact"}],"termid":"MONDO:0015716","xrefs":{"Monarch":{"xref_id":"0015716"}}}


id: MONDO:1010822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand, non-human animal","termid":"MONDO:1010159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split hand, domestic cat","secondary_identifiers":["OMIA:000942-9685"],"termid":"MONDO:1010822","xrefs":{"Monarch":{"xref_id":"1010822"}}}


id: MOD:00513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex(2) HexNAc","definition_xrefs":["PubMed:1694179","PubMed:5490222","PubMed:111247","RESID:AA0151#var","Unimod:145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc1dHex2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(2)","type":"related"},{"name":"HexNAc1dHex2","type":"related"}],"termid":"MOD:00513"}


id: GO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycinergic synaptic transmission in the presence of zinc. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dph","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glycinergic","termid":"GO:0060094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"zinc potentiation of synaptic transmission, glycinergic","synonyms":[{"name":"zinc potentiation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060095"}


id: PR:Q9P3T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial 2-oxodicarboxylate carrier that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01456","PANTHER:PTHR24089:SF76","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxodicarboxylate carrier (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.09","secondary_identifiers":["UniProtKB:Q9P3T7"],"synonyms":[{"name":"Spom972h-SLC25A21","type":"exact"}],"termid":"PR:Q9P3T7"}


id: PBO:0090998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication preinitiation complex assembly protein","termid":"PBO:0090998"}


id: MONDO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually benign neoplasm that arises from the kidney. It usually affects females. It is characterized by the presence of a biphasic pattern with tubular and cystic structures in a spindle cell stroma. Patients usually present with flank pain and hematuria.","definition_xrefs":["NCIT:C37263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed epithelial stromal tumor","termid":"MONDO:0003272"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"mixed epithelial stromal tumor of the kidney","secondary_identifiers":["UMLS:C1272677","DOID:2678","MEDGEN:220870"],"synonyms":[{"name":"MEST","type":"exact"},{"name":"adult mesoblastic nephroma","type":"related"},{"name":"benign MEST","type":"exact"},{"name":"mixed epithelial and stromal tumor of kidney","type":"exact"},{"name":"mixed epithelial and stromal tumour of kidney","type":"exact"},{"name":"mixed epithelial stromal tumor of the kidney","type":"exact"}],"termid":"MONDO:0002386","xrefs":{"Monarch":{"xref_id":"0002386"}}}


id: PBO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member B","termid":"PBO:0047194"}


id: PR:O59801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski2 gene.","definition_xrefs":["UniProtKB:O59801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C550.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.03c","synonyms":[{"name":"Spom972h-ski2","type":"exact"}],"termid":"PR:O59801"}


id: PBO:0056435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 8","termid":"PBO:0056435"}


id: PBO:0119648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEAD1 antisense RNA 1","termid":"PBO:0119648"}


id: GO:0160041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The receptor ligand activity of any polypeptide expressed in, and secreted from a neuron.","definition_xrefs":["PMID:18806786","PMID:21922398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0005488","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"neuropeptide activity","termid":"GO:0160041"}


id: FYECO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A temperature at which a conditional (heat- or cold-sensitive) allele grows, usually at a normal or nearly normal rate.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permissive temperature","termid":"FYECO:0000227"}


id: GO:0010007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric enzyme complex composed of three subunits, all of which are required for enzyme activity, which catalyzes the chelation of Mg by proto IX in an ATP-dependent manner.","definition_xrefs":["PMID:11842180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"magnesium chelatase complex","termid":"GO:0010007"}


id: PBO:0043481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 3","termid":"PBO:0043481"}


id: GO:0046477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"},{"relation_name":"is_a","term_name":"glycosphingolipid catabolic process","termid":"GO:0046479"},{"relation_name":"is_a","term_name":"ceramide catabolic process","termid":"GO:0046514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycosylceramide catabolic process","synonyms":[{"name":"glycosylceramide breakdown","type":"exact"},{"name":"glycosylceramide catabolism","type":"exact"},{"name":"glycosylceramide degradation","type":"exact"}],"termid":"GO:0046477"}


id: GO:0019054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in the processes and activities of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host cellular process (obsolete GO:0019054)","secondary_identifiers":["Reactome:R-HSA-9833110","Reactome:R-HSA-168276"],"synonyms":[{"name":"modification by virus of host cellular process","type":"exact"},{"name":"modulation by virus of host process","type":"broad"},{"name":"modulation of cellular process in host by virus","type":"related"},{"name":"regulation by virus of host cellular process","type":"exact"},{"name":"regulation of cellular process in host by virus","type":"exact"},{"name":"regulation of host cellular process by virus","type":"exact"},{"name":"viral host cell process manipulation","type":"exact"}],"termid":"GO:0019054"}


id: PBO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 4","termid":"PBO:0042420"}


id: PBO:0117084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F3 antisense RNA 1","termid":"PBO:0117084"}


id: PBO:0081177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 27","termid":"PBO:0081177"}


id: PBO:0071212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 53","termid":"PBO:0071212"}


id: PBO:0075603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1","termid":"PBO:0075603"}


id: FYPO:0005897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"increased protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin during G1 phase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005897"}


id: PBO:0079601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E4 pseudogene","termid":"PBO:0079601"}


id: MONDO:0800489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neonatal/infantile-onset self-limited familial syndrome characterized by the presence of febrile seizures in an individual with a family history of seizures/epilepsy. Febrile seizures may be typical febrile seizures or 'febrile seizures plus' (FS+) may occur, where febrile seizures continue past 6 years of age and/or are accompanied by afebrile seizures which may be generalized or focal. FS+ and GEFS+ are distinguished on the basis of family history. A number of dominantly inherited genes have been linked to both GEFS+ and FS+, with implications for specific genetic counselling, due to the variable severity of the epilepsy in different family members. Although febrile seizures are the hallmark of this familial syndrome, not all individuals in a family may have these.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile-onset self-limited epilepsy syndrome","termid":"MONDO:0800488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"genetic epilepsy with febrile seizures plus spectrum","synonyms":[{"name":"GEFS+","type":"exact"}],"termid":"MONDO:0800489","xrefs":{"Monarch":{"xref_id":"0800489"}}}


id: PBO:0056785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 2","termid":"PBO:0056785"}


id: PBO:0066000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALBP1 pseudogene 2","termid":"PBO:0066000"}


id: FYPO:0002618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing valproic acid.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on valproic acid","synonyms":[{"name":"normal cell population growth in presence of valproic acid","type":"exact"},{"name":"normal cell population growth on valproic acid","type":"exact"},{"name":"normal cellular response to valproic acid","type":"related"},{"name":"normal vegetative cell population growth on valproic acid","type":"exact"}],"termid":"FYPO:0002618"}


id: GO:1903208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["PMID:24252804","GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903208)","synonyms":[{"name":"down regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down regulation of neuron death in response to H2O2","type":"exact"},{"name":"down regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to H2O2","type":"exact"},{"name":"down-regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to H2O2","type":"exact"},{"name":"downregulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of hydrogen peroxide-induced neuron death","type":"narrow"},{"name":"inhibition of neuron death in response to H2O2","type":"narrow"},{"name":"inhibition of neuron death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of neuronal cell death in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of neuron death in response to H2O2","type":"exact"},{"name":"negative regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"neuroprotection against H2O2-induced cell death","type":"related"},{"name":"neuroprotection against hydrogen peroxide","type":"related"},{"name":"protection against H2O2-induced neuron death","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron death","type":"related"}],"termid":"GO:1903208"}


id: PATO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing fibrin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinoid","termid":"PATO:0002115"}


id: PBO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 61","termid":"PBO:0050358"}


id: MONDO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant glandular neoplasm arising from the exocrine pancreas. Microscopically it is characterized by the presence of mucoid stroma formation, papillary patterns, and cystic changes. It has been associated with KRAS and Tp53 gene mutations.","definition_xrefs":["NCIT:C5725"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pancreatic adenocarcinoma","termid":"MONDO:0006047"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic intraductal papillary-mucinous carcinoma","secondary_identifiers":["MEDGEN:235451","Orphanet:424058","UMLS:C1335304","GARD:21779","DOID:7574"],"synonyms":[{"name":"intraductal papillary mucinous carcinoma of pancreas","type":"exact"},{"name":"intraductal papillary-colloid carcinoma of pancreas","type":"related"},{"name":"intraductal papillary-colloid carcinoma of the pancreas","type":"related"},{"name":"intraductal papillary-colloidal carcinoma of pancreas","type":"related"},{"name":"intraductal papillary-colloidal carcinoma of the pancreas","type":"related"},{"name":"intraductal papillary-mucinous carcinoma of pancreas","type":"exact"},{"name":"intraductal papillary-mucinous carcinoma of the pancreas","type":"related"},{"name":"pancreatic intraductal papillary mucinous carcinoma","type":"exact"},{"name":"pancreatic intraductal papillary-colloid carcinoma","type":"related"},{"name":"pancreatic intraductal papillary-colloidal carcinoma","type":"related"},{"name":"pancreatic intraductal papillary-mucinous carcinoma","type":"exact"}],"termid":"MONDO:0004285","xrefs":{"Monarch":{"xref_id":"0004285"}}}


id: MONDO:0014322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the HFM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 9","secondary_identifiers":["MEDGEN:816706","DOID:0080866","OMIM:615724","UMLS:C3810376"],"synonyms":[{"name":"HFM1 primary ovarian failure","type":"exact"},{"name":"Pof9","type":"related"},{"name":"premature ovarian failure 9","type":"exact"},{"name":"premature ovarian failure type 9","type":"exact"},{"name":"primary ovarian failure caused by mutation in HFM1","type":"exact"}],"termid":"MONDO:0014322","xrefs":{"Monarch":{"xref_id":"0014322"}}}


id: FYPO:0006532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is normal (i.e. indistinguishable from wild type) during prophase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"normal protein localization to centromere during meiotic prophase II","synonyms":[{"name":"normal protein localisation to centromere during meiotic prophase II","type":"exact"},{"name":"normal protein localisation to centromere during prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centric region during meiotic prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centromeric region during prophase II","type":"exact"}],"termid":"FYPO:0006532"}


id: PBO:0062298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 9","termid":"PBO:0062298"}


id: MONDO:0023203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fuchs atrophia gyrata chorioideae et retinae","secondary_identifiers":["UMLS:C2931721","MESH:C538071","MEDGEN:444126"],"termid":"MONDO:0023203","xrefs":{"Monarch":{"xref_id":"0023203"}}}


id: PBO:0063475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 3 pseudogene 2","termid":"PBO:0063475"}


id: GO:0004666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + AH2 + 2 O2 = A + H2O + prostaglandin H2.","definition_xrefs":["RHEA:23728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase activity","secondary_identifiers":["EC:1.14.99.1","MetaCyc:PROSTAGLANDIN-ENDOPEROXIDE-SYNTHASE-RXN","Reactome:R-HSA-140355","Reactome:R-HSA-2309787"],"synonyms":[{"name":"(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate,hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"(PG)H synthase activity","type":"related"},{"name":"PG synthetase activity","type":"related"},{"name":"fatty acid cyclooxygenase activity","type":"related"},{"name":"prostaglandin G/H synthase activity","type":"related"},{"name":"prostaglandin endoperoxide synthetase activity","type":"related"},{"name":"prostaglandin synthase activity","type":"related"},{"name":"prostaglandin synthetase activity","type":"related"}],"termid":"GO:0004666"}


id: PBO:0088916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ lysophospholipase fusion protein Dfr1","termid":"PBO:0088916"}


id: MONDO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial polydactyly of fingers is a limb malformation syndrome characterized by the attachment of a superfluous digit on the first digit. Four types have been defined: Type I (PPD1 or biphalangeal thumb polydactyly) which shows duplication of one or more skeletal components of a biphalangeal thumb; type II (PPD2 or polydactyly of a triphalangeal thumb) which involves the presence of a usually opposable triphalangeal thumb with or without additional duplication of thumb; type III (PPD3 or polydactyly of an index finger) where the thumb is replaced by one or two triphalangeal digits with dermatoglyphic pattern specific for the index finger; and type IV (PPD4 or polysyndactyly) which shows variably mild degrees of thumb duplication and variable syndactyly between 3rd and 4th fingers. Among the four types, PPD1 is the most frequent form. Preaxial polydactyly of fingers is caused by disruptions to the developmental patterning of the limb along the anterior-posterior axis that lead to changes in digit number and identity.","definition_xrefs":["Orphanet:294939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial polydactyly of fingers","secondary_identifiers":["MEDGEN:87498","GARD:12767","OMIMPS:174400","UMLS:C0345354","icd11.foundation:1066753144"],"synonyms":[{"name":"preaxial polydactyly of hand","type":"exact"}],"termid":"MONDO:0017425","xrefs":{"Monarch":{"xref_id":"0017425"}}}


id: PBO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression cell cycle regulated","termid":"PBO:0000436"}


id: PBO:0038925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G7","termid":"PBO:0038925"}


id: MOD:00052
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-acetyl-L-cysteine.","definition_xrefs":["PubMed:14730666","PubMed:1500421","ChEBI:28939","PubMed:15350136","PubMed:11857757","RESID:AA0043","PubMed:11999733","PubMed:6725286","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-cysteine","termid":"MOD:00646"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905","MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-cysteine","synonyms":[{"name":"(2R)-2-acetamido-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-acetylamino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-acetylamino-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylcysteine","type":"exact"},{"name":"N-acetyl-L-cysteine","type":"exact"},{"name":"N-acetylated cysteine","type":"exact"},{"name":"N-acetylcysteine","type":"exact"},{"name":"NAcCys","type":"exact"}],"termid":"MOD:00052"}


id: GO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of acetylated low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylated low-density lipoprotein catabolic process (obsolete GO:0045193)","synonyms":[{"name":"Ac-LDL catabolic process","type":"exact"},{"name":"Ac-LDL catabolism","type":"exact"},{"name":"acetylated low-density lipoprotein breakdown","type":"exact"},{"name":"acetylated low-density lipoprotein catabolic process","type":"exact"},{"name":"acetylated low-density lipoprotein catabolism","type":"exact"},{"name":"acetylated low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045193"}


id: GO:0035817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process where sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron, which contributes to decreasing the amount of sodium that is excreted in urine per unit time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal sodium ion absorption","termid":"GO:0070294"},{"relation_name":"part_of","term_name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"renal sodium ion absorption involved in negative regulation of renal sodium excretion","termid":"GO:0035817"}


id: MONDO:0012918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAAF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 10","secondary_identifiers":["MEDGEN:382707","OMIM:612518","UMLS:C2675867","MESH:C567287","DOID:0110612","GARD:15560"],"synonyms":[{"name":"CILD10","type":"exact"},{"name":"DNAAF2 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 10","type":"related"},{"name":"ciliary dyskinesia, primary, 10, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 10","type":"exact"},{"name":"primary ciliary dyskinesia 10 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAAF2","type":"exact"},{"name":"primary ciliary dyskinesia type 10","type":"exact"}],"termid":"MONDO:0012918","xrefs":{"Monarch":{"xref_id":"0012918"}}}


id: PBO:0072855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1B","termid":"PBO:0072855"}


id: MONDO:0975829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia, congenital dyserythropoietic, type IVb","secondary_identifiers":["OMIM:620969"],"termid":"MONDO:0975829","xrefs":{"Monarch":{"xref_id":"0975829"}}}


id: PBO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 5","termid":"PBO:0060761"}


id: MONDO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular reaction of the skin characterized by erythema and wheal formation due to localized increase of vascular permeability. The causative mechanism may be allergy, infection, or stress.","definition_xrefs":["MESH:D014581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"urticaria","secondary_identifiers":["DOID:1555","MEDGEN:22587","ICD10CM:L50","EFO:0005531","ICD9:708.8","NCIT:C3432","ICD9:708","UMLS:C0042109","HP:0001025","ICD9:708.9","SCTID:126485001"],"synonyms":[{"name":"Urticarias","type":"related"},{"name":"hives","type":"exact"},{"name":"urticaria","type":"exact"},{"name":"urticaria (disease)","type":"exact"}],"termid":"MONDO:0005492","xrefs":{"Monarch":{"xref_id":"0005492"}}}


id: FYPO:0006103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short cytoplasmic microtubules","termid":"FYPO:0002760"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"short interphase microtubules","synonyms":[{"name":"short cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules","type":"exact"},{"name":"short interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006103"}


