# terms

id: MONDO:0013491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without intellectual disability","secondary_identifiers":["UMLS:C3151356","MEDGEN:462706","DOID:0080317","OMIM:613926","GARD:15729"],"synonyms":[{"name":"MLC2B","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without intellectual disability","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without mental retardation","type":"exact"}],"termid":"MONDO:0013491","xrefs":{"Monarch":{"xref_id":"0013491"}}}


id: GO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates peroxisome organization.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by transcription from RNA polymerase II promoter (obsolete GO:0100004)","termid":"GO:0100004"}


id: RO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during_or_before","termid":"RO:0002497"}


id: MONDO:0019467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive immature hematologic neoplasm formerly known as blastic NK cell lymphoma, composed of cells with a lymphoblast-like morphology. Recent evidence suggests derivation from a plasmacytoid monocyte. Patients present with cutaneous tumors and bone marrow involvement.","definition_xrefs":["NCIT:C7203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"},{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"CD4+/CD56+ hematodermic neoplasm","secondary_identifiers":["ICD9:202.80","Orphanet:86870","DOID:0081076","EFO:0010580","ICDO:9727/3","SCTID:445105005","UMLS:C1301363","GARD:10556","ONCOTREE:BPDCN","icd11.foundation:783045723","MEDGEN:220972"],"synonyms":[{"name":"BPDCN","type":"exact"},{"name":"CD4+/CD56+ hematodermic neoplasm","type":"exact"},{"name":"agranular CD4+ CD56+ hematodermic neoplasm/tumor","type":"exact"},{"name":"agranular CD4+ natural Killer cell leukaemia","type":"exact"},{"name":"agranular CD4+ natural Killer cell leukemia","type":"exact"},{"name":"blastic NK-cell lymphoma","type":"exact"},{"name":"blastic natural Killer leukemia/lymphoma","type":"exact"},{"name":"blastic plasmacytoid Dendritic cell neoplasm","type":"exact"},{"name":"blastic plasmacytoid dendritic cell","type":"related"},{"name":"blastic plasmacytoid dendritic cell neoplasm","type":"exact"},{"name":"early plasmacytoid Dendritic cell leukemia/lymphoma","type":"exact"},{"name":"lymphoblastoid variant of NK-cell lymphoma","type":"exact"},{"name":"monomorphic NK-cell lymphoma","type":"exact"},{"name":"primary cutaneous CD4+/CD56+ hematolymphoid neoplasm","type":"exact"}],"termid":"MONDO:0019467","xrefs":{"Monarch":{"xref_id":"0019467"}}}


id: GO:0046007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"negatively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of activated T cell proliferation","synonyms":[{"name":"down regulation of activated T cell proliferation","type":"exact"},{"name":"down-regulation of activated T cell proliferation","type":"exact"},{"name":"downregulation of activated T cell proliferation","type":"exact"},{"name":"inhibition of activated T cell proliferation","type":"narrow"},{"name":"negative regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of activated T-cell proliferation","type":"exact"},{"name":"negative regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046007"}


id: PBO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 9","termid":"PBO:0071645"}


id: PBO:0011086
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae THI80","termid":"PBO:0011086"}


id: GO:0016794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a diphosphoester, releasing a diphosphate and a free hydroxyl group.","definition_xrefs":["EC:3.1.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}


id: PBO:0074810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14B","termid":"PBO:0074810"}


id: PBO:0054282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1673","termid":"PBO:0054282"}


id: PBO:0040933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 4","termid":"PBO:0040933"}


id: PBO:0026888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation_with_lagging_chromosomes_and_decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0026888"}


id: PBO:0039250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 2 family member","termid":"PBO:0039250"}


id: PBO:0068207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 514","termid":"PBO:0068207"}


id: PBO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 12","termid":"PBO:0070859"}


id: PBO:0005423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur protein Isa1","termid":"PBO:0005423"}


id: PBO:0045327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 6","termid":"PBO:0045327"}


id: MONDO:0030905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 117","secondary_identifiers":["GARD:22665","OMIM:619174","UMLS:C5436937","MEDGEN:1747842"],"synonyms":[{"name":"DFNB117","type":"narrow"},{"name":"deafness, autosomal recessive 117","type":"narrow"}],"termid":"MONDO:0030905","xrefs":{"Monarch":{"xref_id":"0030905"}}}


id: PBO:0059148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloperoxidase","termid":"PBO:0059148"}


id: PBO:0082358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in degradation of the ER and nucleus; involved specifically in autophagy of perinuclear endoplasmic reticulum in response to nitrogen starvation or rapamycin treatment; localizes to the perinuclear ER","termid":"PBO:0082358"}


id: PBO:0073554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing adaptor protein B","termid":"PBO:0073554"}


id: GO:0048728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proboscis over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis development","secondary_identifiers":["GO:0016349"],"termid":"GO:0048728"}


id: GO:0106423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-L-tyrosyl-[tubulin] + H2O = C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-[tubulin] + L-tyrosine.","definition_xrefs":["PMID:35482892","RHEA:57444","PMID:29146869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallocarboxypeptidase activity","termid":"GO:0004181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"tubulin-tyrosine carboxypeptidase","secondary_identifiers":["EC:3.4.17.17"],"synonyms":[{"name":"tubulinyl-Tyr carboxypeptidase","type":"exact"}],"termid":"GO:0106423"}


id: PBO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1 (predicted)","termid":"PBO:0003830"}


id: RO:HOM0000060
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Between-species paralogy that involves single copy paralogs resulting from reciprocal gene loss.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_1_homology_relationship_with","termid":"RO:HOM0000019"},{"relation_name":"is_a","term_name":"in_between-species_paralogy_relationship_with","termid":"RO:HOM0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_apparent_orthology_relationship_with","synonyms":[{"name":"1:1 paralogy","type":"exact"},{"name":"apparent 1:1 orthology","type":"exact"},{"name":"apparent orthologous to","type":"exact"},{"name":"pseudoorthology","type":"exact"}],"termid":"RO:HOM0000060"}


id: PBO:0066532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 8","termid":"PBO:0066532"}


id: PBO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS repressor factor like","termid":"PBO:0046491"}


id: PBO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposition","termid":"PBO:0031615"}


id: FYPO:0002464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis, elongated, and branched (and septated). Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, branched, curved, elongated cells (obsolete FYPO:0002464)","synonyms":[{"name":"inviable microcolony, branched, curved, elongated, septated vegetative cells","type":"exact"},{"name":"inviable microcolony, curved, branched, elongated cells","type":"exact"}],"termid":"FYPO:0002464"}


id: PBO:0029984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane_formation","termid":"PBO:0029984"}


id: GO:0033623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of integrin activation","synonyms":[{"name":"regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033623"}


id: PBO:0005275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (predicted)","termid":"PBO:0005275"}


id: MONDO:0011445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the SPG11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 11","secondary_identifiers":["GARD:4919","MEDGEN:388073","DOID:0110764","UMLS:C1858479","NCIT:C148317","Orphanet:2822","OMIM:604360","SCTID:715491000"],"synonyms":[{"name":"HSP-TCC","type":"exact"},{"name":"Nakamura Osame syndrome","type":"related"},{"name":"Nakamura-Osame syndrome","type":"exact"},{"name":"SPG11","type":"exact"},{"name":"SPG11 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive spastic paraplegia 11","type":"exact"},{"name":"autosomal recessive spastic paraplegia complicated with thin corpus callosum","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 11","type":"exact"},{"name":"autosomal recessive spastic paraplegia with mental impairment and thin corpus callosum","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in SPG11","type":"exact"},{"name":"hereditary spastic paraplegia mental impairment and thin corpus callosum","type":"related"},{"name":"hereditary spastic paraplegia type 11","type":"exact"},{"name":"spastic paraplegia - intellectual deficit - thin corpus callosum","type":"related"},{"name":"spastic paraplegia 11","type":"related"},{"name":"spastic paraplegia 11, autosomal recessive","type":"related"},{"name":"spastic paraplegia, autosomal recessive, complicated, with thin corpus callosum","type":"related"},{"name":"spastic paraplegia, autosomal recessive, with mental impairment and thin corpus callosum","type":"related"},{"name":"spastic paraplegia-intellectual disability-thin corpus callosum syndrome","type":"exact"}],"termid":"MONDO:0011445","xrefs":{"Monarch":{"xref_id":"0011445"}}}


id: PBO:0081078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 9","termid":"PBO:0081078"}


id: MONDO:1010507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, cattle","secondary_identifiers":["OMIA:001803-9913"],"termid":"MONDO:1010507","xrefs":{"Monarch":{"xref_id":"1010507"}}}


id: MONDO:0859317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB2, autosomal recessive","secondary_identifiers":["MEDGEN:1824028","OMIM:620125","UMLS:C5774255"],"termid":"MONDO:0859317","xrefs":{"Monarch":{"xref_id":"0859317"}}}


id: PBO:0083239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; encoded within the 35S rRNA gene on the opposite strand","termid":"PBO:0083239"}


id: GO:0140475
data:
  {"annotated_genes":["SJAG_04558","SJAG_03200","SJAG_02246","SJAG_07018","SJAG_02795","SJAG_03116","SJAG_04455","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98633,100220,101352,103416,110554],"is_not":false,"summary":null,"term":"GO:0140475"},{"annotations":[80699,113233,103186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106166"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings together the spindle pole body and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["PMID:19942852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal anchor activity","termid":"GO:0008093"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_04455":null,"SJAG_04558":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008093"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0008093","GO:0003674"],"is_obsolete":false,"name":"spindle pole body anchor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140475","terms_by_termid":{"GO:0106166":null,"GO:0140475":null}}


id: GO:0061683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the seminal vesicle is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["PMID:16916376","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"seminal vesicle epithelium development","termid":"GO:0061108"},{"relation_name":"part_of","term_name":"seminal vesicle morphogenesis","termid":"GO:0061682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in seminal vesicle morphogenesis","synonyms":[{"name":"gonecyst branching morphogenesis","type":"exact"},{"name":"seminal gland branching morphogenesis","type":"exact"},{"name":"seminal vesicle branching","type":"exact"},{"name":"seminal vesicle branching morphogenesis","type":"exact"}],"termid":"GO:0061683"}


id: PR:P87113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sigma non-opioid intracellular receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00568","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-8 sterol isomerase erg2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.07c","secondary_identifiers":["UniProtKB:P87113"],"synonyms":[{"name":"Delta-8--Delta-7 sterol isomerase erg2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SIGMAR1","type":"exact"},{"name":"ergosterol biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87113"}


id: MONDO:0020431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juxtaposition of the atrial appendages is a rare atrial appendage anomaly when both appendages are located on the left or the right side of the great arteries. It is asymptomatic and is usually diagnosed incidentally, but is frequently associated with other congenital heart diseases.","definition_xrefs":["Orphanet:99100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juxtaposition of the atrial appendages","secondary_identifiers":["UMLS:C1290478","MEDGEN:712843","GARD:19648"],"synonyms":[{"name":"juxtaposition of the atrial auricles","type":"exact"}],"termid":"MONDO:0020431","xrefs":{"Monarch":{"xref_id":"0020431"}}}


id: MONDO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast disease characterized by a collection of pus in the breast.","definition_xrefs":["DOID:0060323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast abscess","secondary_identifiers":["icd11.foundation:1033306788","SCTID:28432003","UMLS:C0151463","MEDGEN:508760"],"termid":"MONDO:0000749","xrefs":{"Monarch":{"xref_id":"0000749"}}}


id: PBO:0113442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate adaptor for Cdc48p; ubiquitin regulatory X (UBX) and Ub-associated (UBA) domain-containing protein that acts as a substrate recruiting cofactor; K48-specific Ub chain binding protein involved in ER-associated degradation (ERAD); positively regulates Glc7p protein phosphatase activity to promote growth and mitotic progression in complex with Cdc48p; regulated by nuclear Ub-dependent degradation (INMAD pathway) independent of the Asi and Doa10 complexes; homolog of human p47 (NSFL1C)","termid":"PBO:0113442"}


id: GO:0098608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylselenol + H2O => H2Se + CH3OH.","definition_xrefs":["PMID:17988700","PMID:17451884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylselenol demethylase activity","secondary_identifiers":["Reactome:R-HSA-2408530"],"termid":"GO:0098608"}


id: GO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that decreases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative transcription elongation factor activity (obsolete GO:0008148)","synonyms":[{"name":"negative transcription elongation factor activity","type":"exact"}],"termid":"GO:0008148"}


id: GO:1900933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900933"}


id: PR:O13861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tcd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.10","synonyms":[{"name":"Spom972h-tcd1","type":"exact"},{"name":"t(6)A37 dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13861"}


id: GO:0120303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism changes its pigmentation (lightening in response to a brighter environment or darkening in response to a dimmer environment) in response to a change in light intensity detected by melanopsin-expressing eye cells.","definition_xrefs":["PMID:29239123","GOC:krc","GOC:cvs","PMID:32898924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"background adaptation","termid":"GO:0120302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visually-mediated background adaptation","termid":"GO:0120303"}


id: GO:0005318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphate:hydrogen symporter (obsolete GO:0005318)","synonyms":[{"name":"phosphate:hydrogen symporter","type":"exact"},{"name":"phosphate:proton symporter activity","type":"exact"}],"termid":"GO:0005318"}


id: GO:0098590
data:
  {"annotated_genes":["SJAG_01437","SJAG_01353","SJAG_01345","SJAG_04668","SJAG_02351","SJAG_04001","SJAG_02572","SJAG_01888","SJAG_03608","SJAG_00368","SJAG_02989","SJAG_04509","SJAG_03915","SJAG_01794","SJAG_01388","SJAG_04637","SJAG_04714","SJAG_02684","SJAG_01189","SJAG_01978","SJAG_02916","SJAG_04620","SJAG_02222","SJAG_00514","SJAG_01660","SJAG_01114","SJAG_01983","SJAG_04167","SJAG_04905","SJAG_01738","SJAG_04358","SJAG_02924","SJAG_04673","SJAG_03536","SJAG_05285","SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100119,92752,88229,107410,106474,116198,90212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032154"},{"annotations":[88340,91637],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090689"},{"annotations":[106961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106186"},{"annotations":[99336,88488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070250"},{"annotations":[110577,96729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070867"},{"annotations":[88490,116205,88238,115859,109817,90219,112735,111247,117603,95884,103374,93069,114770,102148,97350,93837,97398,101040,92758,108825,88628,92850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031520"},{"annotations":[78428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902929"},{"annotations":[103619,88796,118922,89689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane that is a (regional) part of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01189":null,"SJAG_01345":null,"SJAG_01353":null,"SJAG_01388":null,"SJAG_01437":null,"SJAG_01660":null,"SJAG_01738":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02222":null,"SJAG_02258":null,"SJAG_02351":null,"SJAG_02572":null,"SJAG_02684":null,"SJAG_02916":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03536":null,"SJAG_03608":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04167":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04620":null,"SJAG_04637":null,"SJAG_04668":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane region","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"region of plasma membrane","type":"exact"}],"termid":"GO:0098590","terms_by_termid":{"GO:0031520":null,"GO:0032154":null,"GO:0044853":null,"GO:0070250":null,"GO:0070867":null,"GO:0090689":null,"GO:0106186":null,"GO:1902929":null}}


id: GO:0008169
data:
  {"annotated_genes":["SJAG_01043","SJAG_01192","SJAG_02417","SJAG_03531","SJAG_03877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008425"},{"annotations":[95980,79319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[76607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003838"},{"annotations":[71780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the carbon atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01043":null,"SJAG_01192":null,"SJAG_02417":null,"SJAG_03531":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008169","terms_by_termid":{"GO:0003838":null,"GO:0004851":null,"GO:0008425":null,"GO:0009383":null}}


id: _global:finished_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Xy is finished_by Y if Y part of X, and X and Y share a 3' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_by","termid":"_global:finished_by"}


id: GO:0033982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate 6-phosphate + H+ = L-xylulose 5-phosphate + CO2.","definition_xrefs":["RHEA:14353","EC:4.1.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-dehydro-L-gulonate-6-phosphate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R07125","MetaCyc:RXN0-705"],"synonyms":[{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase (L-xylulose-5-phosphate-forming) activity","type":"related"},{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate 6-phosphate decarboxylase activity","type":"related"},{"name":"KGPDC","type":"related"},{"name":"SgaH","type":"related"},{"name":"SgbH","type":"related"},{"name":"UlaD","type":"related"}],"termid":"GO:0033982"}


id: GO:1902664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["GOC:TermGenie","PMID:23444136","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"positive regulation of protein lipidation","termid":"GO:1903061"},{"relation_name":"positively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"activation of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902664"}


id: MONDO:1011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaptonuria, non-human animal","termid":"MONDO:1010270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, rabbit","secondary_identifiers":["OMIA:001243-9986"],"termid":"MONDO:1011099","xrefs":{"Monarch":{"xref_id":"1011099"}}}


id: GO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose 1,5-bisphosphate, the diphosphorylated sugar 1,5-diphospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 1,5-bisphosphate metabolic process","synonyms":[{"name":"deoxyribose 1,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:0046387"}


id: PBO:0040852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S5-TXNDC5 readthrough (NMD candidate)","termid":"PBO:0040852"}


id: PR:O13670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MTO1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11806:SF0","PRO:DNx","OMA:SCHPO02812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein MTO1 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.06c","secondary_identifiers":["UniProtKB:O13670"],"synonyms":[{"name":"Spom972h-MTO1","type":"exact"}],"termid":"PR:O13670"}


id: FYPO:0000665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal peptidase activity","synonyms":[{"name":"normal protease activity","type":"exact"}],"termid":"FYPO:0000665"}


id: PBO:0081356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 181","termid":"PBO:0081356"}


id: GO:0043096
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"Any process that generates purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleobase salvage","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"purine base salvage","type":"exact"}],"termid":"GO:0043096","terms_by_termid":{"GO:0006168":null}}


id: GO:1904220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GO_REF:0000059","PMID:16120614","GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"regulation of SPT","type":"related"},{"name":"regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"regulation of serine palmitoyltransferase","type":"broad"}],"termid":"GO:1904220"}


id: MONDO:1012273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombopathia, non-human animal","termid":"MONDO:1011695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopathia, dog","secondary_identifiers":["OMIA:001003-9615"],"termid":"MONDO:1012273","xrefs":{"Monarch":{"xref_id":"1012273"}}}


id: PBO:0061818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 8 Y-linked","termid":"PBO:0061818"}


id: GO:1902756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sulfurated eukaryotic molybdenum cofactor(2-).","definition_xrefs":["GO_REF:0000068","GOC:dph","PMID:18258600","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolic process","termid":"GO:1902755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5963"],"synonyms":[{"name":"sulfurated eukaryotic molybdenum cofactor(2-) anabolism","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthesis","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) formation","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) synthesis","type":"exact"}],"termid":"GO:1902756"}


id: PBO:0063723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor membrane component 1","termid":"PBO:0063723"}


id: MONDO:0016340
data:
  {"annotated_genes":["SJAG_03824","SJAG_00930","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[85593,85592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","definition":"An instance of restrictive cardiomyopathy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restrictive cardiomyopathy","termid":"MONDO:0005201"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial restrictive cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:115210","SCTID:233878008","ICD9:425.4","GARD:20532","MEDGEN:468561","Orphanet:217635","UMLS:C0340429"],"synonyms":[{"name":"hereditary restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0016340","terms_by_termid":{"MONDO:0009290":null,"MONDO:0030330":null},"xrefs":{"Monarch":{"xref_id":"0016340"}}}


id: PR:A6X980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc7 gene.","definition_xrefs":["UniProtKB:A6X980","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.07","synonyms":[{"name":"Spom972h-sfc7","type":"exact"},{"name":"TFIIIC subunit sfc7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:A6X980"}


id: MONDO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the exocrine pancreas","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant exocrine pancreas neoplasm","termid":"MONDO:0002116"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"exocrine pancreatic carcinoma","secondary_identifiers":["EFO:0002618","SCTID:372142002","DOID:4905","NCIT:C3850","MEDGEN:65917","UMLS:C0235974"],"synonyms":[{"name":"cancer of pancreas","type":"broad"},{"name":"cancer of the pancreas","type":"broad"},{"name":"carcinoma of exocrine pancreas","type":"exact"},{"name":"carcinoma of pancreas","type":"exact"},{"name":"carcinoma of the pancreas","type":"exact"},{"name":"exocrine cancer","type":"broad"},{"name":"exocrine pancreas carcinoma","type":"exact"},{"name":"pancreas cancer","type":"broad"},{"name":"pancreas carcinoma","type":"exact"},{"name":"pancreatic cancer","type":"broad"},{"name":"pancreatic cancer (not islets)","type":"exact"},{"name":"pancreatic carcinoma","type":"exact"},{"name":"pancreatic carcinoma, familial","type":"related"}],"termid":"MONDO:0005192","xrefs":{"Monarch":{"xref_id":"0005192"}}}


id: GO:0047249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (25S)-5beta-spirostan-3beta-ol + UDP-D-glucose = (25S)-5beta-spirostan-3beta-yl beta-D-glucoside + H+ + UDP.","definition_xrefs":["RHEA:14461","EC:2.4.1.193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"sarsapogenin 3-beta-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04359","MetaCyc:2.4.1.193-RXN"],"synonyms":[{"name":"UDP-glucose:(25S)-5beta-spirostan-3beta-ol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:(25S)-5beta-spirostan-3beta-ol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"sarsapogenin 3beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-sarsapogenin glucosyltransferase activity","type":"related"}],"termid":"GO:0047249"}


id: PBO:0079080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-8","termid":"PBO:0079080"}


id: PBO:0061319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A5","termid":"PBO:0061319"}


id: PR:Q9UUB5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.09c","synonyms":[{"name":"NMS complex subunit mis13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis13","type":"exact"}],"termid":"PR:Q9UUB5"}


id: PBO:0053219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin like","termid":"PBO:0053219"}


id: MONDO:0007456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diarrhea, glucose-stimulated secretory, with common variable immunodeficiency","secondary_identifiers":["MEDGEN:377585","MESH:C565099","OMIM:125890","UMLS:C1852087"],"synonyms":[{"name":"diarrhea, glucose-stimulated secretory, with common variable immunodeficiency","type":"exact"}],"termid":"MONDO:0007456","xrefs":{"Monarch":{"xref_id":"0007456"}}}


id: MONDO:0022896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis contractures cleft","secondary_identifiers":["GARD:1591"],"termid":"MONDO:0022896","xrefs":{"Monarch":{"xref_id":"0022896"}}}


id: PBO:0063020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase","termid":"PBO:0063020"}


id: FYPO:0005030
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:25664722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: PBO:0083126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Double-stranded DNA-dependent helicase of the DExH/D-box family; branch point-binding helicase that preferentially unwinds the nascent lagging strand with a 3' to 5' polarity at a replication fork; contains double-stranded DNA translocase activity; responsible for DNA branch migration; required for maintenance of the mitochondrial (mt) genome; localizes to the mitochondrial matrix; monomeric","termid":"PBO:0083126"}


id: PATO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased diameter","termid":"PATO:0001715"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased anterior-posterior diameter","synonyms":[{"name":"low anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002042"}


id: PR:P39964
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle 5-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01129","PANTHER:PTHR10641:SF17","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division cycle 5-like protein","termid":"PR:000005216"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cdc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.12","secondary_identifiers":["UniProtKB:P39964"],"synonyms":[{"name":"Spom972h-CDC5L","type":"exact"},{"name":"cell division control protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P39964"}


id: GO:0006488
data:
  {"annotated_genes":["SJAG_00394","SJAG_03311","SJAG_03774","SJAG_03656","SJAG_00437","SJAG_04952","SJAG_01950","SJAG_00334","SJAG_04954","SJAG_00924","SJAG_02102","SJAG_03764","SJAG_04821","SJAG_00747","SJAG_04363","SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61723,63621,64613,65847,69469,73468,75352,77092,77585,80375,91485,94260,100146,100356,105377,111475],"is_not":false,"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P.","definition_xrefs":["GOC:jl","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"part_of","term_name":"protein N-linked glycosylation via asparagine","termid":"GO:0018279"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04363":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"dolichol-linked oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446193"],"synonyms":[{"name":"N-linked glycan precursor biosynthesis","type":"exact"},{"name":"N-linked glycan precursor biosynthetic process","type":"exact"},{"name":"dolichol-linked oligosaccharide anabolism","type":"exact"},{"name":"dolichol-linked oligosaccharide biosynthesis","type":"exact"},{"name":"dolichol-linked oligosaccharide formation","type":"exact"},{"name":"dolichol-linked oligosaccharide synthesis","type":"exact"},{"name":"oligosaccharide-PP-dolichol assembly","type":"exact"}],"termid":"GO:0006488","terms_by_termid":{"GO:0006488":null}}


id: PBO:0018153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Nts1","termid":"PBO:0018153"}


id: PBO:0068493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 77, pseudogene","termid":"PBO:0068493"}


id: PBO:0049577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone A","termid":"PBO:0049577"}


id: PBO:0061970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AI member 1 pseudogene","termid":"PBO:0061970"}


id: PATO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's exhibiting excessive discharge of blood from the blood vessels.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic","termid":"PATO:0002105"}


id: MONDO:0006449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular yolk sac tumor (obsolete MONDO:0006449)","termid":"MONDO:0006449","xrefs":{"Monarch":{"xref_id":"0006449"}}}


id: GO:0015373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic anion(out) + Na+(out) = monoatomic anion(in) + Na+(in).","definition_xrefs":["TC:2.A.21.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monoatomic anion:sodium symporter activity","synonyms":[{"name":"anion:sodium symporter activity","type":"broad"},{"name":"monovalent anion:sodium symporter activity","type":"related"}],"termid":"GO:0015373"}


id: GO:0001561
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73633],"is_not":false,"summary":null,"term":"GO:0001561"}]},"cv_name":"biological_process","definition":"A metabolic pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway.","definition_xrefs":["PMID:10198260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fatty acid alpha-oxidation","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PWY-2501","Reactome:R-HSA-389599"],"termid":"GO:0001561","terms_by_termid":{"GO:0001561":null}}


id: MONDO:0002427
data:
  {"annotated_genes":["SJAG_03393","SJAG_03923","SJAG_01179","SJAG_01286","SJAG_02377","SJAG_04641","SJAG_01168","SJAG_02084","SJAG_01317","SJAG_00933","SJAG_00380","SJAG_02242","SJAG_02457","SJAG_05332","SJAG_00059","SJAG_01945","SJAG_02680","SJAG_02885","SJAG_02119","SJAG_00645","SJAG_04822","SJAG_00686","SJAG_00579","SJAG_03692","SJAG_01356","SJAG_01438","SJAG_03720","SJAG_00087","SJAG_03862","SJAG_00526","SJAG_04622","SJAG_04233","SJAG_01400","SJAG_04533","SJAG_02196","SJAG_00863","SJAG_05212","SJAG_04418","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[85793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[85768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[86669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[87389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[87069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[85529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[85642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[86817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[85384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[86531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[87145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[87699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"},{"annotations":[87464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[86357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[86268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[86045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[85610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[86123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[85563,85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[86007,86008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[86651,86652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[87515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[85787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[85858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[86925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[86687,86688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[86694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[85965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86975,86976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[85980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[86111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"Diseases that affect the structure or function of the cerebellum. Cardinal manifestations of cerebellar dysfunction include dysmetria, gait ataxia, and muscle hypotonia.","definition_xrefs":["MESH:D002526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00087":null,"SJAG_00380":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00579":null,"SJAG_00645":null,"SJAG_00686":null,"SJAG_00863":null,"SJAG_00933":null,"SJAG_01168":null,"SJAG_01179":null,"SJAG_01286":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01400":null,"SJAG_01438":null,"SJAG_01945":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02242":null,"SJAG_02377":null,"SJAG_02457":null,"SJAG_02680":null,"SJAG_02885":null,"SJAG_03393":null,"SJAG_03692":null,"SJAG_03720":null,"SJAG_03862":null,"SJAG_03923":null,"SJAG_04233":null,"SJAG_04418":null,"SJAG_04533":null,"SJAG_04622":null,"SJAG_04641":null,"SJAG_04822":null,"SJAG_05212":null,"SJAG_05332":null},"genotype_count":0,"is_obsolete":false,"name":"cerebellar disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:40186","UMLS:C0007760","DOID:2786","SCTID:223176004"],"synonyms":[{"name":"cerebellum disease","type":"exact"},{"name":"cerebellum disease or disorder","type":"exact"},{"name":"disease of cerebellum","type":"exact"},{"name":"disease or disorder of cerebellum","type":"exact"},{"name":"disorder of cerebellum","type":"exact"}],"termid":"MONDO:0002427","terms_by_termid":{"MONDO:0007574":null,"MONDO:0007959":null,"MONDO:0008458":null,"MONDO:0008840":null,"MONDO:0008943":null,"MONDO:0010524":null,"MONDO:0010547":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011402":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0011801":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0012784":null,"MONDO:0013392":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014104":null,"MONDO:0014417":null,"MONDO:0014503":null,"MONDO:0014557":null,"MONDO:0014601":null,"MONDO:0014744":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0018996":null,"MONDO:0030312":null,"MONDO:0030318":null,"MONDO:0030323":null,"MONDO:0032923":null,"MONDO:0033115":null,"MONDO:0033482":null,"MONDO:0044720":null,"MONDO:0100340":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0002427"}}}


id: MONDO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the facial nerve or nuclei. Pontine disorders may affect the facial nuclei or nerve fascicle. The nerve may be involved intracranially, along its course through the petrous portion of the temporal bone, or along its extracranial course. Clinical manifestations include facial muscle weakness, loss of taste from the anterior tongue, hyperacusis, and decreased lacrimation.","definition_xrefs":["MESH:D005155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"sensory ganglionopathy","termid":"MONDO:0021260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geniculate ganglionitis","secondary_identifiers":["UMLS:C0017407","SCTID:72839009","ICD10CM:G51.1","DOID:14075","icd11.foundation:305361524","MEDGEN:4879","ICD9:351.1"],"synonyms":[{"name":"geniculate ganglion inflammation","type":"exact"},{"name":"geniculate ganglionitis","type":"exact"},{"name":"inflammation of geniculate ganglion","type":"exact"}],"termid":"MONDO:0001873","xrefs":{"Monarch":{"xref_id":"0001873"}}}


id: GO:0018491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanoate + CoA + oxidized ferredoxin = propanoyl-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-oxobutyrate synthase activity","secondary_identifiers":["UM-BBD_reactionID:r0358","MetaCyc:2-OXOBUTYRATE-SYNTHASE-RXN","RHEA:32135"],"synonyms":[{"name":"2-ketobutyrate synthase activity","type":"exact"},{"name":"2-oxobutanoate:ferredoxin 2-oxidoreductase (CoA-propionylating)","type":"exact"},{"name":"2-oxobutyrate-ferredoxin oxidoreductase activity","type":"exact"},{"name":"alpha-ketobutyrate synthase activity","type":"exact"},{"name":"alpha-ketobutyrate-ferredoxin oxidoreductase activity","type":"exact"}],"termid":"GO:0018491"}


id: PBO:0064488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A","termid":"PBO:0064488"}


id: PBO:0077292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 35A","termid":"PBO:0077292"}


id: GO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + L-glutamate + ATP = N(alpha)-gamma-L-glutamylhistamine + products of ATP breakdown.","definition_xrefs":["MetaCyc:GAMMA-GLUTAMYLHISTAMINE-SYNTHASE-RXN","EC:6.3.2.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"gamma-glutamylhistamine synthase activity","secondary_identifiers":["RHEA:18881"],"synonyms":[{"name":"L-glutamate:histamine ligase activity","type":"related"},{"name":"g-glutamylhistamine synthase activity","type":"exact"},{"name":"gamma-GHA synthetase activity","type":"related"},{"name":"gamma-glutaminylhistamine synthetase activity","type":"related"}],"termid":"GO:0047914"}


id: MONDO:0011295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD7 on chromosome 13q32.","definition_xrefs":["DOID:0070083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 7","secondary_identifiers":["MEDGEN:350350","UMLS:C1864152","OMIM:603176"],"synonyms":[{"name":"SCZD7","type":"exact"},{"name":"schizophrenia 7","type":"exact"},{"name":"schizophrenia 7 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 13Q-related","type":"related"}],"termid":"MONDO:0011295","xrefs":{"Monarch":{"xref_id":"0011295"}}}


id: PBO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transmembrane transporter Ptr2","termid":"PBO:0018036"}


id: PBO:0070106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 20 pseudogene","termid":"PBO:0070106"}


id: PBO:0057384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548az","termid":"PBO:0057384"}


id: PBO:0082365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Auxilin-like protein involved in vesicular transport; clathrin-binding protein required for uncoating of clathrin-coated vesicles; required for propagation of [URE3] prion variant","termid":"PBO:0082365"}


id: GO:0006188
data:
  {"annotated_genes":["SJAG_04123","SJAG_02850","SJAG_03140","SJAG_03355","SJAG_01814","SJAG_06634","SJAG_04681","SJAG_01661","SJAG_01081","SJAG_02364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70337,77139,57119,64594,60173,72130,65606,58024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[65107,76013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"IMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"IMP anabolism","type":"exact"},{"name":"IMP biosynthesis","type":"exact"},{"name":"IMP formation","type":"exact"},{"name":"IMP synthesis","type":"exact"}],"termid":"GO:0006188","terms_by_termid":{"GO:0006189":null,"GO:0032264":null}}


id: PBO:0080477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 1-3","termid":"PBO:0080477"}


id: PATO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's consisting of blebbing of the nucleus and DNA fragmentation due to the cell undergoing a specific form of programmed cell death termed apoptosis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic","secondary_identifiers":["GO:0006915"],"termid":"PATO:0000638"}


id: PBO:0027242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_nucleolus_inheritance","termid":"PBO:0027242"}


id: PBO:0052188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 1","termid":"PBO:0052188"}


id: GO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to BMP","synonyms":[{"name":"response to BMP stimulus","type":"exact"},{"name":"response to bone morphogenetic protein stimulus","type":"exact"}],"termid":"GO:0071772"}


id: MONDO:0011759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hurler-Scheie syndrome is the intermediate form of mucopolysaccharidosis type 1 (MPS1) between the two extremes Hurler syndrome and Scheie syndrome ; it is a rare lysosomal storage disease, characterized by skeletal deformities and a delay in motor development.","definition_xrefs":["Orphanet:93476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 1","termid":"MONDO:0001586"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"Hurler-Scheie syndrome","secondary_identifiers":["NANDO:2201170","DOID:0111389","MedDRA:10056916","UMLS:C0086431","OMIM:607015","MEDGEN:88566","SCTID:26745009","GARD:12560","NCIT:C122782","NANDO:1200096"],"synonyms":[{"name":"Hurler-Scheie syndrome","type":"exact"},{"name":"Hurler–Scheie syndrome","type":"related"},{"name":"MPS I H-S","type":"exact"},{"name":"MPS1-HS","type":"related"},{"name":"MPS1H/S","type":"exact"},{"name":"MPSIH/S","type":"exact"},{"name":"Scheie disease mps type 1s","type":"related"},{"name":"Scheie's syndrome","type":"related"},{"name":"l-iduronidase deficiency, Scheie type","type":"related"},{"name":"mucopolysaccharidosis IH/S","type":"related"},{"name":"mucopolysaccharidosis type 1H/S","type":"exact"},{"name":"mucopolysaccharidosis type I mild form","type":"related"},{"name":"mucopolysaccharidosis type I-S","type":"related"},{"name":"mucopolysaccharidosis type IH/S","type":"exact"},{"name":"mucopolysaccharidosis type Ih/S","type":"related"},{"name":"mucopolysaccharidosis, mps-I-s","type":"exact"}],"termid":"MONDO:0011759","xrefs":{"Monarch":{"xref_id":"0011759"}}}


id: PBO:0029450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_galactomannan_level","termid":"PBO:0029450"}


id: PBO:0048971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2, mitochondrial","termid":"PBO:0048971"}


id: GO:0015937
data:
  {"annotated_genes":["SJAG_00427","SJAG_04627","SJAG_05277","SJAG_04288","SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71524,72000,78949,80317,89731],"is_not":false,"summary":null,"term":"GO:0015937"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A metabolic process","termid":"GO:0015936"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_01139":null,"SJAG_04288":null,"SJAG_04627":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"coenzyme A biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196783","GO:0006764"],"synonyms":[{"name":"CoA biosynthesis","type":"exact"},{"name":"coenzyme A anabolism","type":"exact"},{"name":"coenzyme A biosynthesis","type":"exact"},{"name":"coenzyme A formation","type":"exact"},{"name":"coenzyme A synthesis","type":"exact"}],"termid":"GO:0015937","terms_by_termid":{"GO:0015937":null}}


id: FYPO:0006884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is thicker than normal during mitotic metaphase.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"thick mitotic spindle during mitotic metaphase","synonyms":[{"name":"increased mitotic spindle thickness during mitotic metaphase","type":"exact"},{"name":"thick mitotic spindle during mitotic metaphase during vegetative growth","type":"exact"},{"name":"thick spindle during mitotic metaphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006884"}


id: PBO:0050445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R pseudogene 3","termid":"PBO:0050445"}


id: MOD:00202
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to D-serine.","definition_xrefs":["PubMed:7973665","RESID:AA0195#SER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine (Ser)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser(Ser)","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Ser)","type":"exact"}],"termid":"MOD:00202"}


id: MONDO:1012335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone spavin, non-human animal","termid":"MONDO:1011768"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone spavin, red deer","secondary_identifiers":["OMIA:001232-9860"],"termid":"MONDO:1012335","xrefs":{"Monarch":{"xref_id":"1012335"}}}


id: PBO:0005776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit, SAP128 family (predicted)","termid":"PBO:0005776"}


id: PBO:0057413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o","termid":"PBO:0057413"}


id: GO:0042391
data:
  {"annotated_genes":["SJAG_01541","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67279,89872],"is_not":false,"summary":null,"term":"GO:0042391"}]},"cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:jl","GOC:mtg_cardio","GOC:tb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane potential","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0042391","terms_by_termid":{"GO:0042391":null}}


id: GO:1990770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry in the intestine between the stomach and the large intestine.","definition_xrefs":["PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"part_of","term_name":"intestine smooth muscle contraction","termid":"GO:0014827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"small intestine smooth muscle contraction","termid":"GO:1990770"}


id: PBO:0075908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13 Hsp70 interacting protein","termid":"PBO:0075908"}


id: MONDO:0009401
data:
  {"annotated_genes":["SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87056],"is_not":false,"summary":null,"term":"MONDO:0009401"}]},"cv_name":"mondo","definition":"Hyperprolinemia type 2 is an autosomal recessive proline metabolism disorder due to pyroline-5-carboxylate dehydrogenase deficiency. The condition is often benign but clinical signs may include seizures, intellectual deficit and mild developmental delay.","definition_xrefs":["Orphanet:79101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperprolinemia","termid":"MONDO:0023419"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperprolinemia type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080543","MedDRA:10058512","SCTID:717181004","MedDRA:10058514","GARD:6710","OMIM:239510","MESH:C538385","UMLS:C2931835","MEDGEN:419175"],"synonyms":[{"name":"1 alpha pyrroline-5-carboxylate dehydrogenase deficiency","type":"related"},{"name":"1-pyrroline-5-carboxylate dehydrogenase activity disease","type":"exact"},{"name":"1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"related"},{"name":"ALDH4A1 hyperprolinemia","type":"exact"},{"name":"HPII","type":"related"},{"name":"HYRPRO2","type":"related"},{"name":"delta-1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"exact"},{"name":"delta1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"exact"},{"name":"disorder of 1-pyrroline-5-carboxylate dehydrogenase activity","type":"exact"},{"name":"hyperprolinemia caused by mutation in ALDH4A1","type":"exact"},{"name":"hyperprolinemia type 2","type":"exact"},{"name":"hyperprolinemia, type 2","type":"related"},{"name":"hyperprolinemia, type II","type":"related"},{"name":"type 2 hyperprolinemia","type":"related"}],"termid":"MONDO:0009401","terms_by_termid":{"MONDO:0009401":null},"xrefs":{"Monarch":{"xref_id":"0009401"}}}


id: MONDO:0027068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mitochondrial complex 1 deficiency, mitochondrial type 1, in which the cause of the disease is a mutation in the MTND3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disease","termid":"MONDO:0000001"},{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, mitochondrial type","termid":"MONDO:0100134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, mitochondrial type 1","secondary_identifiers":["DOID:0112101","UMLS:C4746992","OMIM:500014","MEDGEN:1648371"],"synonyms":[{"name":"MC1DM1","type":"exact"},{"name":"mitochondrial complex I deficiency, mitochondrial type 1","type":"exact"}],"termid":"MONDO:0027068","xrefs":{"Monarch":{"xref_id":"0027068"}}}


id: GO:0015351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of bilirubin from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete bilirubin secondary active transmembrane transporter activity (obsolete GO:0015351)","synonyms":[{"name":"bilirubin porter activity","type":"related"},{"name":"bilitranslocase","type":"narrow"}],"termid":"GO:0015351"}


id: PBO:0045507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DST antisense RNA 1","termid":"PBO:0045507"}


id: GO:0033581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation in Golgi (obsolete GO:0033581)","synonyms":[{"name":"protein amino acid galactosylation in Golgi","type":"exact"}],"termid":"GO:0033581"}


id: MONDO:0035586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cramp-fasciculation syndrome","secondary_identifiers":["Orphanet:581271","UMLS:C0751381","MEDGEN:148299","GARD:6205","ICD10CM:G90.8"],"termid":"MONDO:0035586","xrefs":{"Monarch":{"xref_id":"0035586"}}}


id: PBO:0079883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B","termid":"PBO:0079883"}


id: PBO:0042901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 5","termid":"PBO:0042901"}


id: PBO:0087964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the ATP-binding cassette (ABC) family; involved in bile acid transport; negative regulator of vacuole fusion; regulates release of lumenal Ca2+ stores; similar to mammalian bile transporters; YBT1 has a paralog, VMR1, that arose from the whole genome duplication","termid":"PBO:0087964"}


id: PBO:0117108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOBTB2 antisense RNA 1","termid":"PBO:0117108"}


id: GO:0031115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule polymerization","termid":"GO:0031113"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0065003","GO:0000226","GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"negative regulation of microtubule polymerization","synonyms":[{"name":"down regulation of microtubule polymerization","type":"exact"},{"name":"down-regulation of microtubule polymerization","type":"exact"},{"name":"downregulation of microtubule polymerization","type":"exact"},{"name":"inhibition of microtubule polymerization","type":"narrow"}],"termid":"GO:0031115"}


id: SO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by histone modification.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_histone_modification","termid":"SO:0001221"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_histone_modification","synonyms":[{"name":"gene silenced by histone modification","type":"exact"}],"termid":"SO:0001225"}


id: PR:O74918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11097:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.08","secondary_identifiers":["UniProtKB:O74918"],"synonyms":[{"name":"SPCC757.08","type":"related"},{"name":"Spom972h-EXOSC9","type":"exact"},{"name":"ribosomal RNA-processing protein 45 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74918"}


id: GO:0051520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops the active process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bipolar cell growth","termid":"GO:0051517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"termination of bipolar cell growth","termid":"GO:0051520"}


id: PBO:0034186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcribed_to","termid":"PBO:0034186"}


id: GO:0050451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 CoA + NADP+ = CoA-disulfide + NADPH + H+.","definition_xrefs":["RHEA:14705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0015036","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"CoA-disulfide reductase (NADPH) activity","secondary_identifiers":["EC:1.8.1.14","MetaCyc:COA-DISULFIDE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"CoA-disulfide reductase (NADH) activity","type":"related"},{"name":"CoA-disulfide reductase (NADP) activity","type":"exact"},{"name":"CoA-disulfide reductase activity","type":"broad"},{"name":"CoA-disulphide reductase activity","type":"broad"},{"name":"CoADR activity","type":"related"},{"name":"NADH:CoA-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A disulfide reductase activity","type":"related"}],"termid":"GO:0050451"}


id: RO:HOM0000006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by similarity with regard to selected structural parameters.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_structural_homology_relationship_with","synonyms":[{"name":"idealistic homology","type":"related"},{"name":"structural homologous to","type":"exact"}],"termid":"RO:HOM0000006"}


id: MONDO:0004371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clear cell meningioma arising in multiple areas of the spinal cord characterized by the presence of clear glycogen-rich polygonal cells.","definition_xrefs":["NCIT:C5287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell meningioma","termid":"MONDO:0002918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal multifocal clear cell meningioma","secondary_identifiers":["DOID:7824","MEDGEN:277661","UMLS:C1336051"],"synonyms":[{"name":"multifocal clear cell meningioma of spine","type":"exact"},{"name":"multifocal clear cell meningioma of the spine","type":"related"},{"name":"spinal multifocal clear cell meningioma","type":"exact"}],"termid":"MONDO:0004371","xrefs":{"Monarch":{"xref_id":"0004371"}}}


id: GO:0010643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication by chemical coupling","termid":"GO:0010643"}


id: PBO:0081234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 19","termid":"PBO:0081234"}


id: PBO:0066354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1 pseudogene 2","termid":"PBO:0066354"}


id: GO:1990156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DnaB helicase, and DnaG (a primase). Facilitates the unwinding of double-stranded DNA and the synthesis of RNA primer sequences during DNA replication and repair in Prokaryotes.","definition_xrefs":["PMID:14557266","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"part_of","term_name":"core primosome complex","termid":"GO:1990098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaB-DnaG complex","synonyms":[{"name":"DnaB-DnaG primosome complex","type":"related"}],"termid":"GO:1990156"}


id: MONDO:0013086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 6","secondary_identifiers":["MEDGEN:414440","OMIM:613017","UMLS:C2751678"],"synonyms":[{"name":"NBLST6","type":"exact"},{"name":"neuroblastoma, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0013086","xrefs":{"Monarch":{"xref_id":"0013086"}}}


id: MONDO:1010641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XII deficiency that occurs in killer whale.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XII deficiency, non-human animal","termid":"MONDO:1010074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XII deficiency, killer whale","secondary_identifiers":["OMIA:000364-9733"],"termid":"MONDO:1010641","xrefs":{"Monarch":{"xref_id":"1010641"}}}


id: MONDO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Krabbe disease that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0002525","MONDO:0005244","MONDO:0005328","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"adult Krabbe disease","secondary_identifiers":["icd11.foundation:699668826","GARD:20345","MEDGEN:120623","UMLS:C0268252","Orphanet:206448","NANDO:1200077","NANDO:2201219"],"synonyms":[{"name":"Krabbe disease of adults","type":"exact"}],"termid":"MONDO:0016091","xrefs":{"Monarch":{"xref_id":"0016091"}}}


id: PATO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000200 learning (obsolete PATO:0000200)","termid":"PATO:0000200"}


id: MOD:01061
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxymethyl-L-cysteine.","definition_xrefs":["OMSSA:2","Unimod:6#C","DeltaMass:0","DeltaMass:197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxymethyl-L-cysteine","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Carboxymethyl Cystenyl","type":"exact"},{"name":"Carboxymethyl cysteine","type":"exact"},{"name":"CmC","type":"exact"},{"name":"Iodoacetic acid derivative","type":"related"},{"name":"carboxymethylc","type":"exact"}],"termid":"MOD:01061"}


id: PBO:0054059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1402","termid":"PBO:0054059"}


id: GO:0017025
data:
  {"annotated_genes":["SJAG_00650","SJAG_02458","SJAG_03900","SJAG_03120","SJAG_00692","SJAG_03095","SJAG_02174","SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58222,66548,70904,71100,72333,76081,77219,77620],"is_not":false,"summary":null,"term":"GO:0017025"}]},"cv_name":"molecular_function","definition":"Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs).","definition_xrefs":["GOC:txnOH","GOC:jl","PMID:16858867","PMID:1509519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TBP-class protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TATA-binding protein binding","type":"narrow"},{"name":"TBP binding","type":"narrow"},{"name":"TBP-related factor (TRF) protein binding","type":"narrow"}],"termid":"GO:0017025","terms_by_termid":{"GO:0017025":null}}


id: MONDO:0023513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ellis-van Creveld syndrome","termid":"MONDO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005093","MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"Jeune syndrome situs inversus","secondary_identifiers":["UMLS:C2931535","MEDGEN:419100","GARD:303","MESH:C537572"],"termid":"MONDO:0023513","xrefs":{"Monarch":{"xref_id":"0023513"}}}


id: GO:1905221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet formation.","definition_xrefs":["GOC:TermGenie","PMID:10606160","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of platelet formation","termid":"GO:1905219"},{"relation_name":"positively_regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet formation","synonyms":[{"name":"activation of platelet extrusion","type":"narrow"},{"name":"activation of platelet formation","type":"narrow"},{"name":"positive regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet formation","type":"exact"},{"name":"up-regulation of platelet extrusion","type":"exact"},{"name":"up-regulation of platelet formation","type":"exact"},{"name":"upregulation of platelet extrusion","type":"exact"},{"name":"upregulation of platelet formation","type":"exact"}],"termid":"GO:1905221"}


id: PBO:0048955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 6","termid":"PBO:0048955"}


id: MONDO:0016812
data:
  {"annotated_genes":["SJAG_03098","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[85424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"Dopa-responsive dystonia (DRD) describes a group of neurometabolic disorders characterized by dystonia that typically shows diurnal fluctuations, that responds excellently to levodopa (L-dopa) and that is comprised of autosomal dominant dopa-responsive dystonia (DYT5a), autosomal recessive dopa-responsive dystonia (DYT5b) and dopa responsive dystonia due to sepiapterin reductase (SR) deficiency.","definition_xrefs":["Orphanet:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C538007","NANDO:1200516","SCTID:230332007","NCIT:C116719","NANDO:2200885","GARD:12144","icd11.foundation:1534901505"],"synonyms":[{"name":"DYT-GCH1 (subtype)","type":"related"},{"name":"DYT-SPR (subtype)","type":"related"},{"name":"DYT-TH (subtype)","type":"related"},{"name":"DYT5","type":"related"},{"name":"DYT5 dystonia","type":"exact"},{"name":"HPD with diurnal fluctuation","type":"exact"},{"name":"Segawa's disease","type":"exact"},{"name":"dopa-responsive dystonia","type":"exact"},{"name":"hereditary progressive dystonia with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0016812","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0016812"}}}


id: PBO:0089862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane potassium ion transmembrane transporter Trk2","termid":"PBO:0089862"}


id: PBO:0031904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Tor1","termid":"PBO:0031904"}


id: PBO:0041261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q A chain","termid":"PBO:0041261"}


id: PBO:0063099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD6B pseudogene 1","termid":"PBO:0063099"}


id: FYPO:0003371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:18256290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to actomyosin contractile ring","termid":"FYPO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000032"],"is_obsolete":false,"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to actomyosin contractile ring abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003371"}


id: PBO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family (predicted)","termid":"PBO:0000850"}


id: FYPO:0002105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape but is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with normal cell shape","synonyms":[{"name":"inviable cell with normal cell shape during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with normal cell shape during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with normal cell shape","type":"exact"}],"termid":"FYPO:0002105"}


id: GO:0100064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter (obsolete GO:0100064)","termid":"GO:0100064"}


id: SO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is polyadenylated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"polyA_sequence","termid":"SO:0000610"},{"relation_name":"has_quality","term_name":"polyadenylated","termid":"SO:0000246"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylated_mRNA","synonyms":[{"name":"polyadenylated mRNA","type":"exact"}],"termid":"SO:0000871"}


id: MONDO:0017331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pilotto syndrome is a rare genetic multiple developmental anomalies syndrome, that is characterized by craniofacial anomalies (microcephaly, brachycephaly, craniosynostosis, facial asymmetry, cleft lip, cleft palate, dysmorphic facial features, ear lobe malformations, low hair line), congenital heart defects, hypogenitalism and/or hypogonadism, intellectual disability, scoliosis or kyphoscoliosis, short hypoplastic ribs, failure to thrive, growth delay, short stature and/or micromelia. There have been no further descriptions in the literature since 1975.","definition_xrefs":["Orphanet:2894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pilotto syndrome","secondary_identifiers":["MEDGEN:419091","MESH:C537400","UMLS:C2931484"],"synonyms":[{"name":"cleft lip and palate, congenital heart disease, scoliosis, short stature, and intellectual disability","type":"related"},{"name":"cleft lip and palate, congenital heart disease, scoliosis, short stature, and mental retardation","type":"related"}],"termid":"MONDO:0017331","xrefs":{"Monarch":{"xref_id":"0017331"}}}


id: GO:0061743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism acquires a novel neuromuscular action or movement as the result of experience.","definition_xrefs":["GOC:PARL","GOC:bf","Wikipedia:Motor_learning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor learning","termid":"GO:0061743"}


id: GO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"acetyl-CoA catabolic process","synonyms":[{"name":"acetyl-CoA breakdown","type":"exact"},{"name":"acetyl-CoA catabolism","type":"exact"},{"name":"acetyl-CoA degradation","type":"exact"}],"termid":"GO:0046356"}


id: MONDO:1010943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine cutaneous t-cell lymphoma","termid":"MONDO:0700169"},{"relation_name":"is_a","term_name":"mycosis fungoides, non-human animal","termid":"MONDO:1010211"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, dog","termid":"MONDO:1010948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycosis fungoides, dog","secondary_identifiers":["OMIA:001109-9615"],"termid":"MONDO:1010943","xrefs":{"Monarch":{"xref_id":"1010943"}}}


id: PBO:0052510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 24","termid":"PBO:0052510"}


id: MONDO:0007700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hawkinsinuria is an inborn error of tyrosine metabolism characterized by failure to thrive, persistent metabolic acidosis, fine and sparse hair, and excretion of the unusual cyclic amino acid metabolite, hawkinsin ((2-l-cystein-S-yl, 4-dihydroxycyclohex-5-en-1-yl)acetic acid), in the urine.","definition_xrefs":["Orphanet:2118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hawkinsinuria","secondary_identifiers":["DOID:0111362","OMIM:140350","UMLS:C2931042","SCTID:414380008","GARD:5668","icd11.foundation:786595759","MEDGEN:419319","MESH:C535845"],"synonyms":[{"name":"4-HPPD deficiency","type":"exact"},{"name":"4-alpha-hydroxyphenylpyruvate hydroxylase deficiency","type":"exact"},{"name":"4-hydroxyphenylpyruvic acid dioxygenase deficiency","type":"exact"},{"name":"hawkinsinuria","type":"exact"}],"termid":"MONDO:0007700","xrefs":{"Monarch":{"xref_id":"0007700"}}}


id: PBO:0051938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intelectin 2","termid":"PBO:0051938"}


id: FYPO:0007060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament polymerization, i.e. the addition of actin monomers to a filament, occurs to a lower extent than normal as part of contractile ring assembly during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly","synonyms":[{"name":"decreased actin filament depolymerisation involved in actomyosin contractile ring assembly","type":"exact"},{"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"decreased actin filament depolymerization involved in actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"decreased actin filament depolymerization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"reduced actin filament depolymerization involved in actomyosin contractile ring assembly","type":"exact"}],"termid":"FYPO:0007060"}


id: MONDO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of acinar adenocarcinoma of the prostate gland characterized by the presence of signet ring malignant cells.","definition_xrefs":["NCIT:C5535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar prostate adenocarcinoma, signet ring variant","secondary_identifiers":["MEDGEN:1835069","UMLS:C5787291","DOID:3504"],"synonyms":[{"name":"acinar prostate adenocarcinoma, signet Ring variant","type":"exact"},{"name":"prostate gland signet ring cell carcinoma","type":"exact"},{"name":"prostate signet Ring cell carcinoma","type":"exact"},{"name":"prostate signet ring cell adenocarcinoma","type":"related"},{"name":"prostate signet ring cell carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of prostate","type":"exact"},{"name":"signet Ring cell carcinoma of the prostate","type":"exact"}],"termid":"MONDO:0002672","xrefs":{"Monarch":{"xref_id":"0002672"}}}


id: GO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"positive regulation of vasculature development","termid":"GO:1904018"},{"relation_name":"positively_regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of angiogenesis","synonyms":[{"name":"activation of angiogenesis","type":"narrow"},{"name":"stimulation of angiogenesis","type":"narrow"},{"name":"up regulation of angiogenesis","type":"exact"},{"name":"up-regulation of angiogenesis","type":"exact"},{"name":"upregulation of angiogenesis","type":"exact"}],"termid":"GO:0045766"}


id: PBO:0005101
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not detected in other Schizos","termid":"PBO:0005101"}


id: PBO:0047054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 114 member A2","termid":"PBO:0047054"}


id: GO:0050208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alpha-2,8-linked polymer of sialic acid = CoA + polysialic acid acetylated at O-7 or O-9.","definition_xrefs":["EC:2.3.1.136","MetaCyc:POLYSIALIC-ACID-O-ACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"polysialic-acid O-acetyltransferase activity","secondary_identifiers":["RHEA:11604"],"synonyms":[{"name":"acetyl-CoA:polysialic-acid O-acetyltransferase activity","type":"exact"}],"termid":"GO:0050208"}


id: PBO:0054862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2276","termid":"PBO:0054862"}


id: PR:Q9Y7N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grx3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7N3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.06c","synonyms":[{"name":"Spom972h-grx3","type":"exact"}],"termid":"PR:Q9Y7N3"}


id: GO:0010151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Expansion of the chloroplast that usually precedes division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast elongation","termid":"GO:0010151"}


id: GO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"callose deposition in cell wall","synonyms":[{"name":"callose localization in cell wall","type":"exact"},{"name":"cell wall callose deposition","type":"exact"},{"name":"cell wall callose localization","type":"exact"}],"termid":"GO:0052543"}


id: PBO:0040845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell linker","termid":"PBO:0040845"}


id: GO:0071062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to vitronectin.","definition_xrefs":["PMID:10835423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-vitronectin complex","synonyms":[{"name":"ITGAV-ITGB3-VTN complex","type":"narrow"}],"termid":"GO:0071062"}


id: PBO:0066824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 123","termid":"PBO:0066824"}


id: PBO:0045063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 3","termid":"PBO:0045063"}


id: GO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the P-TEFb-cap methyltransferase complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"P-TEFb-cap methyltransferase complex localization","synonyms":[{"name":"P-TEFb-cap methyltransferase complex localisation","type":"exact"},{"name":"establishment and maintenance of P-TEFb-cap methyltransferase complex localization","type":"exact"}],"termid":"GO:0070817"}


id: PBO:0046882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A7, pseudogene","termid":"PBO:0046882"}


id: FYPO:0002613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal at the mating type locus. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H2A phosphorylation at mating type locus during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"normal histone H2A phosphorylation at mating type region during vegetative growth","type":"exact"}],"termid":"FYPO:0002613"}


id: GO:0010777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic mismatch repair","termid":"GO:0000710"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006281","GO:0007049","GO:0006259","GO:0006310","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic mismatch repair involved in reciprocal meiotic recombination","termid":"GO:0010777"}


id: PBO:0003666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36, Rtc6 (predicted)","termid":"PBO:0003666"}


id: GO:0046186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde biosynthetic process","synonyms":[{"name":"acetaldehyde anabolism","type":"exact"},{"name":"acetaldehyde biosynthesis","type":"exact"},{"name":"acetaldehyde formation","type":"exact"},{"name":"acetaldehyde synthesis","type":"exact"}],"termid":"GO:0046186"}


id: GO:1902049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neosartoricin.","definition_xrefs":["GOC:TermGenie","PMID:23368997","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"neosartoricin metabolic process","termid":"GO:1902048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"neosartoricin catabolic process","synonyms":[{"name":"neosartoricin breakdown","type":"exact"},{"name":"neosartoricin catabolism","type":"exact"},{"name":"neosartoricin degradation","type":"exact"}],"termid":"GO:1902049"}


id: PR:Q09890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.16c gene.","definition_xrefs":["UniProtKB:Q09890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C584.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.16c","synonyms":[{"name":"Spom972h-SPCC584.16c","type":"exact"}],"termid":"PR:Q09890"}


id: GO:0060705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the neurons of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation involved in salivary gland development","termid":"GO:0060705"}


id: PBO:0059988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 8","termid":"PBO:0059988"}


id: PR:Q10446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-induced degradation protein 8 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.13","secondary_identifiers":["UniProtKB:Q10446"],"synonyms":[{"name":"Spom972h-GID8","type":"exact"}],"termid":"PR:Q10446"}


id: GO:0019439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aromatic compound catabolic process (obsolete GO:0019439)","termid":"GO:0019439"}


id: PBO:0036544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase Met1","termid":"PBO:0036544"}


id: PBO:0082760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; increases efficiency of first and second step pre-mRNA splicing; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis","termid":"PBO:0082760"}


id: MONDO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrin secretion abnormality","secondary_identifiers":["MEDGEN:507382","UMLS:C0000774","ICD9:251.5","SCTID:47344007","DOID:13656"],"termid":"MONDO:0001770","xrefs":{"Monarch":{"xref_id":"0001770"}}}


id: PBO:0040656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBOX1 antisense RNA 1","termid":"PBO:0040656"}


id: PBO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036156"}


id: PBO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CCAAT element","termid":"PBO:0003051"}


id: MONDO:0015124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare adrenal disease (obsolete MONDO:0015124)","secondary_identifiers":["Orphanet:101954"],"termid":"MONDO:0015124","xrefs":{"Monarch":{"xref_id":"0015124"}}}


id: GO:0071959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah","PMID:1708436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, arms","termid":"GO:0071961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:0071959"}


id: PBO:0077508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 225B","termid":"PBO:0077508"}


id: PBO:0077136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor protein","termid":"PBO:0077136"}


id: GO:0050403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-zeatin + UDP-D-glucose = O-beta-D-glucosyl-trans-zeatin + H+ + UDP.","definition_xrefs":["RHEA:23224","EC:2.4.1.203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"trans-zeatin O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4723","KEGG_REACTION:R02118"],"synonyms":[{"name":"UDP-glucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-zeatin O-glucosyltransferase activity","type":"related"},{"name":"zeatin O-b-D-glucosyltransferase activity","type":"exact"},{"name":"zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"zeatin O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050403"}


id: PBO:0068416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease/angiogenin inhibitor 1","termid":"PBO:0068416"}


id: PBO:0062846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSTM1 antisense RNA 1","termid":"PBO:0062846"}


id: PATO:0000883
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000883 female fertility value (obsolete PATO:0000883)","termid":"PATO:0000883"}


id: GO:0060213
data:
  {"annotated_genes":["SJAG_01436","SJAG_00686","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73166,90055,105287],"is_not":false,"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0060211"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"positively_regulates","term_name":"nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0000289"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01436":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear-transcribed mRNA poly(A) tail shortening","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of 3' to 5' mRNA deadenylation","type":"related"},{"name":"positive regulation of mRNA deadenylation","type":"related"},{"name":"positive regulation of nuclear mRNA poly(A) tail shortening","type":"related"}],"termid":"GO:0060213","terms_by_termid":{"GO:0060213":null}}


id: GO:0072741
data:
  {"annotated_genes":["SJAG_00333","SJAG_04461","SJAG_02022","SJAG_04597","SJAG_02645","SJAG_00279","SJAG_03602","SJAG_04703","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96020],"is_not":false,"summary":null,"term":"GO:0072741"},{"annotations":[94770],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[98787],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[105730,91496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[119036,111186,92687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[108332],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, the site of cell division.","definition_xrefs":["GOC:mah","PMID:19756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00333":null,"SJAG_02022":null,"SJAG_02645":null,"SJAG_02831":null,"SJAG_03602":null,"SJAG_04461":null,"SJAG_04597":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell division site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell division site","type":"exact"}],"termid":"GO:0072741","terms_by_termid":{"GO:0071574":null,"GO:0072741":null,"GO:0120047":null,"GO:0140325":null,"GO:1904498":null,"GO:1905391":null}}


id: PBO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, involved in mitochondrial protein turnover (predicted)","termid":"PBO:0001069"}


id: PBO:0027983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_small_cell_with_abnormal_septum_morphology","termid":"PBO:0027983"}


id: SO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript with stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_read_through","termid":"SO:0000883"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_read_through","synonyms":[{"name":"gene with stop codon read through","type":"exact"}],"termid":"SO:0000697"}


id: MONDO:0008470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with punctate corneal dystrophy","secondary_identifiers":["MESH:C566660","OMIM:183850","UMLS:C1866727","Orphanet:163673","DOID:0112286","MEDGEN:357119"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with punctate corneal dystrophy","type":"exact"},{"name":"spondyloepiphyseal dysplasia, Byers type","type":"exact"}],"termid":"MONDO:0008470","xrefs":{"Monarch":{"xref_id":"0008470"}}}


id: PBO:0116632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 5","termid":"PBO:0116632"}


id: MONDO:1010814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, pig","secondary_identifiers":["OMIA:000810-9823"],"termid":"MONDO:1010814","xrefs":{"Monarch":{"xref_id":"1010814"}}}


id: GO:0141208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-lactoyl-L-lysyl-[protein] + NAD = L-lysyl-[protein] + nicotinamide +2''-O-lactoyl-ADP-D-ribose, transfering a lactoyl group attached to a lysine residue in a protein to NAD.","definition_xrefs":["RHEA:80287","PMID:38512451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacetylase activity","termid":"GO:0034979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"NAD-dependent protein lysine delactylase activity","synonyms":[{"name":"protein lysine delactylase activity","type":"broad"}],"termid":"GO:0141208"}


id: PBO:0039482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A5, pseudogene","termid":"PBO:0039482"}


id: GO:0019525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate metabolic process","termid":"GO:0019522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"keto-D-gluconate metabolic process","synonyms":[{"name":"keto-D-gluconate metabolism","type":"exact"}],"termid":"GO:0019525"}


id: GO:1904289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic DNA damage checkpoint.","definition_xrefs":["GO_REF:0000058","PMID:16549501","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"regulates","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"regulation of mitotic DNA damage checkpoint","termid":"GO:1904289"}


id: PBO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE Element Binding","termid":"PBO:0002104"}


id: FYPO:0002927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a polyadenylated RNA (poly(A)RNA) is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0002131","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased poly(A) RNA binding","synonyms":[{"name":"decreased polyA RNA binding","type":"exact"},{"name":"decreased polyadenylated RNA binding","type":"exact"},{"name":"decreased protein-poly(A) RNA interaction","type":"exact"},{"name":"reduced poly(A) RNA binding","type":"exact"}],"termid":"FYPO:0002927"}


id: PBO:0042063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 126","termid":"PBO:0042063"}


id: GO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial bud","termid":"GO:0060572"}


id: GO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a chitin-based cuticle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cuticle","termid":"GO:0042302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}


id: MONDO:1010647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypereosinophilic syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome, non-human animal","termid":"MONDO:1010076"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypereosinophilic syndrome, dog","secondary_identifiers":["OMIA:000502-9615"],"termid":"MONDO:1010647","xrefs":{"Monarch":{"xref_id":"1010647"}}}


id: PBO:0076426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 2","termid":"PBO:0076426"}


id: MONDO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A factitious disorder that involves a care giver's deliberate exaggeration, fabrication, and/or induce physical, psychological, behavioral, and/or mental health problems in others.","definition_xrefs":["DOID:0060045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factitious disorder","termid":"MONDO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Munchausen by proxy","secondary_identifiers":["MEDGEN:88372","MESH:D016735","SCTID:95637005","UMLS:C0085277"],"synonyms":[{"name":"Munchausen by proxy syndrome","type":"exact"},{"name":"Munchausen syndrome by proxy","type":"exact"}],"termid":"MONDO:0000597","xrefs":{"Monarch":{"xref_id":"0000597"}}}


id: GO:1900979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"positively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tatiopterin metabolic process","synonyms":[{"name":"activation of tatiopterin metabolic process","type":"narrow"},{"name":"activation of tatiopterin metabolism","type":"exact"},{"name":"positive regulation of tatiopterin metabolism","type":"exact"},{"name":"up regulation of tatiopterin metabolic process","type":"exact"},{"name":"up regulation of tatiopterin metabolism","type":"exact"},{"name":"up-regulation of tatiopterin metabolic process","type":"exact"},{"name":"up-regulation of tatiopterin metabolism","type":"exact"},{"name":"upregulation of tatiopterin metabolic process","type":"exact"},{"name":"upregulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900979"}


id: PBO:0056306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 2","termid":"PBO:0056306"}


id: PATO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000850 relative auditory ability (obsolete PATO:0000850)","termid":"PATO:0000850"}


id: MONDO:0007407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed cryoglobulinemia (MC) is a rare multisystem disease characterized by the presence of circulating cryoprecipitable immune complexes in the serum, manifested clinically by a classical triad of purpura, weakness and arthralgia.","definition_xrefs":["Orphanet:91138"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryoglobulinemic vasculitis","secondary_identifiers":["MESH:C565141","ICD10CM:D89.1","ICD9:273.2","GARD:6386","MEDGEN:343814","icd11.foundation:55133785","OMIM:123550","SCTID:190815001","UMLS:C1852456","MedDRA:10027756"],"synonyms":[{"name":"MC","type":"exact"},{"name":"Meltzer syndrome","type":"related"},{"name":"Mixed Cryoglobulinemia","type":"exact"},{"name":"cryoglobulinemia, familial mixed","type":"related"},{"name":"essential cryoglobulinemia","type":"exact"},{"name":"essential mixed cryoglobulinemia","type":"exact"},{"name":"familial mixed cryoglobulinemia","type":"related"},{"name":"mixed cryoglobulinemia","type":"exact"},{"name":"primary cryoglobulinemia","type":"exact"}],"termid":"MONDO:0007407","xrefs":{"Monarch":{"xref_id":"0007407"}}}


id: PBO:0113290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; Golgi inorganic phosphate (Pi) exporter that balances Pi import associated with NDP-sugar transport into the Golgi; involved in recycling of early glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0113290"}


id: GO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-16 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-16 receptor activity","synonyms":[{"name":"IL-16 receptor activity","type":"exact"},{"name":"IL-16R","type":"exact"}],"termid":"GO:0042012"}


id: FYPO:0003272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium hypochlorite.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on sodium hypochlorite","synonyms":[{"name":"normal cell population growth in presence of sodium hypochlorite","type":"exact"},{"name":"normal cell population growth on NaOCl","type":"exact"},{"name":"normal cell population growth on sodium hypochlorite","type":"exact"},{"name":"normal cellular response to sodium hypochlorite","type":"related"},{"name":"normal vegetative cell population growth on sodium hypochlorite","type":"exact"}],"termid":"FYPO:0003272"}


id: MONDO:0957809
data:
  {"annotated_genes":["SJAG_01759"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86597],"is_not":false,"summary":null,"term":"MONDO:0957809"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital neutropenia","termid":"MONDO:0018542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia, severe congenital, 10, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1851433","OMIM:620534","UMLS:C5882756"],"termid":"MONDO:0957809","terms_by_termid":{"MONDO:0957809":null},"xrefs":{"Monarch":{"xref_id":"0957809"}}}


id: PBO:0055463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2896","termid":"PBO:0055463"}


id: FYPO:0003020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, does not occur. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PomBase:mah","GO:0031952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein autophosphorylation during vegetative growth","synonyms":[{"name":"abolished protein autophosphorylation during mitotic cell cycle","type":"related"},{"name":"protein autophosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003020"}


id: PR:G2TRS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP35G2.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P35G2.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.17","synonyms":[{"name":"Spom972h-SPBP35G2.17","type":"exact"}],"termid":"PR:G2TRS6"}


id: GO:1905006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:18718461","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"},{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","synonyms":[{"name":"down regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"down-regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"downregulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"inhibition of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"narrow"}],"termid":"GO:1905006"}


id: PBO:0086199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated","termid":"PBO:0086199"}


id: FYPO:0002739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a meiotic cell cycle process normally. A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}


id: PBO:0089378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component alpha subunit Pda1","termid":"PBO:0089378"}


id: PBO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH18 antisense RNA 1","termid":"PBO:0042499"}


id: MONDO:0008519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple synostoses syndrome in which the cause of the disease is a mutation in the NOG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synostoses syndrome","termid":"MONDO:0017923"},{"relation_name":"is_a","term_name":"NOG-related symphalangism spectrum disorder","termid":"MONDO:0100521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome 1","secondary_identifiers":["DOID:0081317","OMIM:186500","UMLS:C0342282","MEDGEN:90977","GARD:15115"],"synonyms":[{"name":"NOG multiple synostoses syndrome","type":"exact"},{"name":"SYNS1","type":"related"},{"name":"Wl syndrome","type":"related"},{"name":"deafness-symphalangism syndrome of Herrmann","type":"related"},{"name":"facioaudiosymphalangism syndrome","type":"related"},{"name":"multiple synostoses syndrome 1","type":"exact"},{"name":"multiple synostoses syndrome caused by mutation in NOG","type":"exact"},{"name":"multiple synostoses syndrome caused by mutation in nog","type":"exact"},{"name":"multiple synostoses syndrome type 1","type":"exact"},{"name":"nog multiple synostoses syndrome","type":"exact"},{"name":"symphalangism brachydactyly syndrome","type":"related"},{"name":"symphalangism-brachydactyly syndrome","type":"related"},{"name":"synostoses multiple with brachydactyly","type":"related"},{"name":"synostoses, multiple, with brachydactyly","type":"related"}],"termid":"MONDO:0008519","xrefs":{"Monarch":{"xref_id":"0008519"}}}


id: GO:1904435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transferrin receptor binding.","definition_xrefs":["GOC:BHF","GOC:kom","PMID:18353247","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transferrin receptor binding (obsolete GO:1904435)","termid":"GO:1904435"}


id: PR:G2TRL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-fold domain-containing protein new1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.15","synonyms":[{"name":"Spom972h-wip1","type":"exact"}],"termid":"PR:G2TRL2"}


id: GO:0031150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sorocarp stalk over time, from its formation to the mature structure. The sorocarp stalk is a tubular structure that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["ISBN:0521583640","GOC:mtg_sensu","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"culmination involved in sorocarp development","termid":"GO:0031154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk development","synonyms":[{"name":"sorophore development","type":"exact"},{"name":"stalk development","type":"broad"},{"name":"stalk formation","type":"broad"}],"termid":"GO:0031150"}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: MONDO:1050000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Folliculitis of the beard and/or mustache areas caused by a bacterial infection, usually caused by Staphylococcus aureus.","direct_ancestors":[{"relation_name":"is_a","term_name":"folliculitis","termid":"MONDO:0006552"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sycosis barbae","secondary_identifiers":["SCTID:156410002","UMLS:C0275798","MEDGEN:546837","MedDRA:10042731"],"synonyms":[{"name":"bacterial folliculitis","type":"related"}],"termid":"MONDO:1050000","xrefs":{"Monarch":{"xref_id":"1050000"}}}


id: PR:Q92357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfr1 gene.","definition_xrefs":["UniProtKB:Q92357","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein cfr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.12","synonyms":[{"name":"CHS5-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfr1","type":"exact"}],"termid":"PR:Q92357"}


id: GO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome.","definition_xrefs":["ISBN:0198506732","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"acrosomal vesicle","secondary_identifiers":["Wikipedia:Acrosome"],"synonyms":[{"name":"acrosomal granule","type":"exact"},{"name":"acrosome","type":"exact"}],"termid":"GO:0001669"}


id: MONDO:0030921
data:
  {"annotated_genes":["SJAG_00554"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85453],"is_not":false,"summary":null,"term":"MONDO:0030921"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00554":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 55, with seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16260","DOID:0080227","UMLS:C4693371","MEDGEN:1635938","OMIM:617831"],"synonyms":[{"name":"MRD55","type":"related"},{"name":"autosomal dominant intellectual disability 55","type":"related"},{"name":"autosomal dominant mental retardation 55","type":"related"},{"name":"intellectual disability, autosomal dominant 55, with seizures","type":"exact"},{"name":"mental retardation, autosomal dominant 55, with seizures","type":"related"}],"termid":"MONDO:0030921","terms_by_termid":{"MONDO:0030921":null},"xrefs":{"Monarch":{"xref_id":"0030921"}}}


id: GO:0072763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hesperadin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"},{"relation_name":"is_a","term_name":"response to hesperadin","termid":"GO:1901595"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hesperadin","termid":"GO:0072763"}


id: GO:1904863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904863"}


id: PR:Q9UR39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hst4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent protein deacetylase hst4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.04c","synonyms":[{"name":"Spom972h-hst4","type":"exact"},{"name":"homologous to SIR2 protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulatory protein SIR2 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR39"}


id: FYPO:0006555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of two or more proteins to DNA is abnormal. The proteins may bind simultaneously or sequentially, but both or all would normally be present together on DNA at some time. One affected gene product may be encoded by the mutated gene, or all may be encoded by different genes.","definition_xrefs":["PMID:20924116","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"abnormal multiple protein binding to DNA","synonyms":[{"name":"abnormal cooperative DNA binding","type":"related"},{"name":"abnormal protein-DNA ternary complex formation","type":"narrow"},{"name":"abnormal protein-protein interaction on DNA","type":"related"},{"name":"abnormal ternary complex formation","type":"related"},{"name":"abolished protein-DNA ternary complex formation","type":"narrow"},{"name":"abolished ternary complex formation","type":"related"}],"termid":"FYPO:0006555"}


id: GO:1900133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of renin secretion into blood stream","synonyms":[{"name":"regulation of renin release into blood stream","type":"exact"}],"termid":"GO:1900133"}


id: SO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant whereby the effect is evaluated with respect to a reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_variant","termid":"SO:0001060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_effect_variant","synonyms":[{"name":"functional effect variant","type":"exact"},{"name":"functional variant","type":"exact"}],"termid":"SO:0001536"}


id: PBO:0050869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP(+)) 1","termid":"PBO:0050869"}


id: GO:0046925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-D-phenylalanine.","definition_xrefs":["PMID:36302388","RESID:AA0341","PMID:12696888"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine (obsolete GO:0046925)","termid":"GO:0046925"}


id: MONDO:0023054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Klumpke paralysis is a type of brachial palsy in newborns. Signs and symptoms include weakness and loss of movement of the arm and hand. Some babies experience drooping of the eyelid on the opposite side of the face as well. This symptom may also be referred to as Horner syndrome. Klumpke paralysis is caused by an injury to the nerves of the brachial plexus which may result from a difficult delivery. This injury can cause a stretching (neuropraxia), tearing (called avulsion when the tear is at the spine, and rupture when it is not), or scarring (neuroma) of the brachial plexus nerves. Most infants with Klumpke paralysis have the more mild form of injury (neuropraxia) and often recover within 6 months.","definition_xrefs":["GARD:0003123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klumpke's paralysis","secondary_identifiers":["GARD:3123","NCIT:C116724","MEDGEN:124376","SCTID:83886009","UMLS:C0270898"],"synonyms":[{"name":"Dejerine Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke palsy","type":"related"},{"name":"Klumpke Palsy","type":"related"},{"name":"Klumpke Paralysis","type":"related"},{"name":"Klumpke paralysis","type":"related"},{"name":"Klumpke's Palsy","type":"related"},{"name":"Klumpke's palsy","type":"related"},{"name":"Klumpke's paralysis","type":"related"},{"name":"Klumpke-DC)jerine brachial plexus injury","type":"related"},{"name":"Klumpke-DC)jerine paralysis","type":"related"},{"name":"Klumpke-Dejerine paralysis","type":"related"},{"name":"Klumpkes Palsy","type":"related"},{"name":"Lower Brachial Plexus Palsy","type":"related"},{"name":"Lower brachial plexus palsy","type":"related"},{"name":"Palsy, Dejerine-Klumpke","type":"related"},{"name":"Palsy, Klumpke's","type":"related"},{"name":"Paralysis of the Lower Brachial Plexus","type":"related"},{"name":"Paralysis, Klumpke","type":"related"},{"name":"klumpke paralysis","type":"related"},{"name":"klumpke's palsy","type":"related"},{"name":"klumpke's paralysis","type":"exact"},{"name":"klumpke-dC)jerine brachial plexus injury","type":"related"},{"name":"klumpke-dC)jerine paralysis","type":"exact"},{"name":"klumpke-dejerine paralysis","type":"related"}],"termid":"MONDO:0023054","xrefs":{"Monarch":{"xref_id":"0023054"}}}


id: PATO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000538 alkali sensitivity value (obsolete PATO:0000538)","termid":"PATO:0000538"}


id: GO:0034018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose = 1,5-anhydro-4-deoxy-D-glycero-hex-1-en-3-ulose.","definition_xrefs":["EC:5.3.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"ascopyrone tautomerase activity","secondary_identifiers":["RHEA:22568","MetaCyc:5.3.3.15-RXN"],"synonyms":[{"name":"1,5-anhydro-D-glycero-hex-3-en-2-ulose delta3-delta1-isomerase activity","type":"related"},{"name":"1,5-anhydro-D-glycero-hex-3-en-2-ulose tautomerase activity","type":"related"},{"name":"APM tautomerase activity","type":"related"},{"name":"APTM","type":"related"},{"name":"ascopyrone P tautomerase activity","type":"related"},{"name":"ascopyrone intramolecular oxidoreductase activity","type":"related"},{"name":"ascopyrone isomerase activity","type":"related"}],"termid":"GO:0034018"}


id: GO:0051566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3-glucoside + UDP-rhamnose = anthocyanidin 3-rutinoside + UDP.","definition_xrefs":["PMID:8130800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anthocyanidin 3-glucoside rhamnosyltransferase activity","synonyms":[{"name":"3RT activity","type":"broad"},{"name":"anthocyanidin 3-glucoside-rhamnosyltransferase activity","type":"exact"}],"termid":"GO:0051566"}


id: PR:P14575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11403:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.04","secondary_identifiers":["UniProtKB:P14575"],"synonyms":[{"name":"SPMIT.04","type":"related"},{"name":"Spom972h-MT-CO3","type":"exact"},{"name":"cytochrome c oxidase polypeptide III (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14575"}


id: PBO:0116683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 14","termid":"PBO:0116683"}


id: GO:0018938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-nitropropane, a clear, colorless liquid with a mild, fruity odor. 2-nitropropane is used principally as a solvent and chemical intermediate. As a solvent, it is used in inks, paints, adhesives, varnishes, polymers, and synthetic materials. It is a feedstock for the manufacture of 2-nitro-2-methyl-1-propanol and 2-amino-2-methyl-1-propanol.","definition_xrefs":["UM-BBD_pathwayID:npp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-nitropropane metabolic process","secondary_identifiers":["MetaCyc:PWY-723"],"synonyms":[{"name":"2-nitropropane metabolism","type":"exact"}],"termid":"GO:0018938"}


id: FYPO:0004065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the elongation of a transcript initiated from an RNA polymerase II promoter is abnormal.","definition_xrefs":["GO:0006368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abnormal transcription elongation from RNA polymerase II promoter","synonyms":[{"name":"abnormal RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"abnormal transcription elongation from RNA polymerase II promoter during mitotic cell cycle","type":"related"},{"name":"abnormal transcription elongation from RNA polymerase II promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0004065"}


id: GO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amine(out) = ADP + phosphate + amine(in).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amine transporter activity (obsolete GO:0031263)","synonyms":[{"name":"ATP-dependent amine transporter activity","type":"exact"},{"name":"amine ABC transporter","type":"narrow"},{"name":"amine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031263"}


id: PBO:0087105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1A has a paralog, RPS1B, that arose from the whole genome duplication","termid":"PBO:0087105"}


id: PBO:0049305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 5 pseudogene 1","termid":"PBO:0049305"}


id: MONDO:0016829
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86902,86901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","definition":"A rare hereditary myopathic degeneration of both gastrointestinal and urinary tracts that causes chronic intestinal pseudo-obstruction. It usually presents after the first decade of life with megaduodenum, megacystis and symptoms such as abdominal distension and/or pain, vomiting, constipation, diarrhea, dysphagia, and/or urinary tract infections.n.","definition_xrefs":["Orphanet:2604"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete megacystis-microcolon-intestinal hypoperistalsis syndrome (obsolete MONDO:0007960)","termid":"MONDO:0007960"},{"relation_name":"is_a","term_name":"visceral myopathy 1","termid":"MONDO:0020754"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"familial visceral myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0266833","GARD:3443","ICD9:359.89","icd11.foundation:1838806574","MEDGEN:120590","SCTID:63684002"],"synonyms":[{"name":"familial hollow visceral myopathy","type":"exact"},{"name":"hereditary hollow visceral myopathy","type":"exact"},{"name":"megaduodenum and/or megacystis","type":"exact"},{"name":"pseudoobstruction idiopathic intestinal","type":"related"},{"name":"visceral myopathy familial","type":"related"}],"termid":"MONDO:0016829","terms_by_termid":{"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0016829"}}}


id: MONDO:0020782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic painless inflammation of the gums. It is characterized by erythema and edema of the gums and bleeding while brushing the teeth.","definition_xrefs":["NCIT:C34474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gingivitis","secondary_identifiers":["icd11.foundation:1542018172","ICD9:523.1","SCTID:72621003","ICD9:523.10","MEDGEN:965","UMLS:C0008684"],"synonyms":[{"name":"Chronic Gingivitis","type":"related"},{"name":"Chronic gingivitis","type":"related"},{"name":"chronic gingivitis","type":"exact"}],"termid":"MONDO:0020782","xrefs":{"Monarch":{"xref_id":"0020782"}}}


id: GO:0030784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3'-hydroxy-N-methyl-(S)-coclaurine = S-adenosyl-L-homocysteine + (S)-reticuline.","definition_xrefs":["EC:2.1.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity","secondary_identifiers":["RHEA:17789","MetaCyc:2.1.1.116-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030784"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: PBO:0084011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen phosphorylase required for the mobilization of glycogen; non-essential; regulated by cyclic AMP-mediated phosphorylation; phosphorylation by Cdc28p may coordinately regulate carbohydrate metabolism and the cell cycle; expression is regulated by stress-response elements and by the HOG MAP kinase pathway","termid":"PBO:0084011"}


id: GO:0030219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specializes features of a megakaryocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megakaryocyte differentiation","synonyms":[{"name":"megakaryocyte cell differentiation","type":"exact"}],"termid":"GO:0030219"}


id: PBO:0077221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 4","termid":"PBO:0077221"}


id: PBO:0056016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 homolog","termid":"PBO:0056016"}


id: GO:1905919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of CoA-transferase activity.","definition_xrefs":["PMID:20164328","GOC:aruk","GOC:TermGenie","GOC:bc","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CoA-transferase activity (obsolete GO:1905919)","synonyms":[{"name":"down regulation of CoA-transferase activity","type":"exact"},{"name":"down-regulation of CoA-transferase activity","type":"exact"},{"name":"downregulation of CoA-transferase activity","type":"exact"},{"name":"inhibition of CoA-transferase activity","type":"narrow"}],"termid":"GO:1905919"}


id: GO:0031638
data:
  {"annotated_genes":["SJAG_04785","SJAG_01868","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87827,92181,97995],"is_not":false,"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"The proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"zymogen activation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zymogen activation by proteolytic cleavage","type":"exact"}],"termid":"GO:0031638","terms_by_termid":{"GO:0031638":null}}


id: PBO:0063377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA associated protein 1","termid":"PBO:0063377"}


id: PBO:0113335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may have been brought into S. cerevisiae genome via horizontal transfer mediated by Ty1 retrotransposition","termid":"PBO:0113335"}


id: PATO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers but not extraembryonic cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Pluripotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pluripotent","termid":"PATO:0001403"}


id: PBO:0061471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRBF2 pseudogene 6","termid":"PBO:0061471"}


id: MONDO:0700273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the RAD51C gene. Pathogenic germline variation in RAD51C confers an autosomal dominant predisposition to tumor formation at multiple primary sites, including ovarian cancer, triple negative breast cancer and ER negative breast cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51C-related cancer predisposition","termid":"MONDO:0700273","xrefs":{"Monarch":{"xref_id":"0700273"}}}


id: PBO:0065314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 37","termid":"PBO:0065314"}


id: PBO:0090936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase Ptp4/Dgk1","termid":"PBO:0090936"}


id: MONDO:1012662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in horses due to a mutation in the ACAN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, ACAN-related, horse","secondary_identifiers":["OMIA:001271-9796"],"termid":"MONDO:1012662","xrefs":{"Monarch":{"xref_id":"1012662"}}}


id: PBO:0083621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2 ubiquitin-conjugating enzyme; involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus","termid":"PBO:0083621"}


id: GO:1904633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:23692924","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of podocyte apoptotic process","synonyms":[{"name":"regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"regulation of podocyte apoptosis","type":"narrow"}],"termid":"GO:1904633"}


id: GO:0010139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway by which pyrimidine bases or pyrimidine deoxyribonucleotides from pyrimidine nucleotide breakdown are converted back to pyrimidine deoxyribonucleotides. The salvage pathway is important where there is no de novo pyrimidine deoxyribonucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide salvage","termid":"GO:0032262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide salvage","secondary_identifiers":["MetaCyc:PWY-7199"],"termid":"GO:0010139"}


id: PBO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin","termid":"PBO:0002466"}


id: PBO:0028065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone","termid":"PBO:0028065"}


id: PBO:0111296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interpro_version","termid":"PBO:0111296"}


id: PBO:0041630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 C","termid":"PBO:0041630"}


id: GO:0030855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium.","definition_xrefs":["PMID:11839751","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation","termid":"GO:0030855"}


id: GO:0016925
data:
  {"annotated_genes":["SJAG_05032","SJAG_02503","SJAG_00604","SJAG_01776","SJAG_02082","SJAG_00727","SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72760,72870,75814,75968,76200,98116,115037],"is_not":false,"summary":null,"term":"GO:0016925"}]},"cv_name":"biological_process","definition":"The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["GOC:jl","PMID:11265250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03843":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein sumoylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SUMO_protein","GO:0019951","GO:0016927","GO:0006485","GO:0019947","Reactome:R-HSA-2990846"],"synonyms":[{"name":"SUMO-protein conjugation","type":"exact"},{"name":"Smt3-protein conjugation","type":"related"},{"name":"Smt3p-protein conjugation","type":"related"},{"name":"protein sumolation","type":"exact"},{"name":"small ubiquitin-related protein 1 conjugation","type":"exact"},{"name":"sumoylation","type":"exact"}],"termid":"GO:0016925","terms_by_termid":{"GO:0016925":null}}


id: PBO:0046243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1","termid":"PBO:0046243"}


id: MONDO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete angiolipoma (obsolete MONDO:0002711)","termid":"MONDO:0002711","xrefs":{"Monarch":{"xref_id":"0002711"}}}


id: MONDO:1011768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone spavin, non-human animal","secondary_identifiers":["OMIA:001232"],"termid":"MONDO:1011768","xrefs":{"Monarch":{"xref_id":"1011768"}}}


id: FYPO:0004938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the first meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis","termid":"FYPO:0003550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during meiosis I","synonyms":[{"name":"decreased protein accumulation during meiosis I","type":"related"},{"name":"decreased protein level during first meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis I","type":"exact"}],"termid":"FYPO:0004938"}


id: PBO:0086031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, abundance changes with carbon source","termid":"PBO:0086031"}


id: GO:1901778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentalenolactone.","definition_xrefs":["PMID:17178094","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone metabolic process","synonyms":[{"name":"pentalenolactone metabolism","type":"exact"}],"termid":"GO:1901778"}


id: GO:0043555
data:
  {"annotated_genes":["SJAG_00786","SJAG_03869","SJAG_02592","SJAG_04383","SJAG_02072","SJAG_01942","SJAG_00690","SJAG_00169","SJAG_04873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110053,116007,99693,70356,75603,94728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[104325,95588,103695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of translation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"translational stress response","type":"exact"}],"termid":"GO:0043555","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: PBO:0065278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2B","termid":"PBO:0065278"}


id: PBO:0084651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor isoform of pyruvate decarboxylase; decarboxylates pyruvate to acetaldehyde, involved in amino acid catabolism; transcription is glucose- and ethanol-dependent, and is strongly induced during sulfur limitation","termid":"PBO:0084651"}


id: PBO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SLC5A family","termid":"PBO:0011471"}


id: MONDO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of squamous cells, intermediate type cells, and mucus-producing cells. Published information on clinical course is limited to single-case reports.","definition_xrefs":["NCIT:C6457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"thymus gland adenocarcinoma","termid":"MONDO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"thymic mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C1334814","DOID:4678","MEDGEN:277383"],"synonyms":[{"name":"Thymus mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of Thymus","type":"exact"},{"name":"mucoepidermoid carcinoma of the Thymus","type":"exact"},{"name":"thymic mucoepidermoid carcinoma","type":"exact"},{"name":"thymus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0003086","xrefs":{"Monarch":{"xref_id":"0003086"}}}


id: PBO:0083494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL121C/RPE1; deletion confers sensitivity to GSAO","termid":"PBO:0083494"}


id: MONDO:0100359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with herpes simplex type 1.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex type 1 infectious disease","termid":"MONDO:0100359","xrefs":{"Monarch":{"xref_id":"0100359"}}}


id: MONDO:0012322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly associated with mutations in the ZIC2 gene.","definition_xrefs":["NCIT:C75460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microform holoprosencephaly","termid":"MONDO:0017219"},{"relation_name":"is_a","term_name":"lobar holoprosencephaly","termid":"MONDO:0019756"},{"relation_name":"is_a","term_name":"alobar holoprosencephaly","termid":"MONDO:0019757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 5","secondary_identifiers":["DOID:0110878","MESH:C566464","OMIM:609637","MEDGEN:355304","UMLS:C1864827"],"synonyms":[{"name":"HPE5","type":"exact"},{"name":"ZIC2 holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 5","type":"exact"},{"name":"holoprosencephaly caused by mutation in ZIC2","type":"exact"},{"name":"holoprosencephaly type 5","type":"exact"}],"termid":"MONDO:0012322","xrefs":{"Monarch":{"xref_id":"0012322"}}}


id: FYPO:0004433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to viridicatumtoxin. Cells stop growing (and may die) at a concentration of viridicatumtoxin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:18204818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to viridicatumtoxin","synonyms":[{"name":"hypersensitive to viridicatumtoxin","type":"exact"},{"name":"sensitive to viridicatumtoxin during mitotic cell cycle","type":"related"},{"name":"sensitive to viridicatumtoxin during vegetative growth","type":"exact"}],"termid":"FYPO:0004433"}


id: MONDO:0100205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 4.","definition_xrefs":["PMID:21636318","PMID:27197630","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 4 infectious disease","synonyms":[{"name":"human rubulavirus 4 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 4","type":"exact"},{"name":"infection caused by parainfluenza virus 4","type":"related"},{"name":"infection due to human parainfluenza virus 4","type":"exact"},{"name":"infection due to parainfluenza virus 4","type":"related"}],"termid":"MONDO:0100205","xrefs":{"Monarch":{"xref_id":"0100205"}}}


id: FYPO:0007684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from early meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of early meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of early meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of early meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of early meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of early meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0007684"}


id: MONDO:1011152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anodontia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anodontia, non-human animal","termid":"MONDO:1010293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anodontia, domestic cat","secondary_identifiers":["OMIA:000048-9685"],"termid":"MONDO:1011152","xrefs":{"Monarch":{"xref_id":"1011152"}}}


id: MONDO:0014361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autism spectrum disorder due to AUTS2 deficiency is a rare genetic syndromic intellectual disability characterized by global developmental delay and borderline to severe intellectual disability, autism spectrum disorder with obsessive behavior, stereotypies, hyperactivity but frequently friendly and affable personality, feeding difficulties, short stature, muscular hypotonia, microcephaly, characteristic dysmorphic features (hypertelorism, high arched eyebrows, ptosis, deep and/or broad nasal bridge, broad/prominent nasal tip, short and/or upturned philtrum, narrow mouth, and micrognathia), and skeletal anomalies (kyphosis and/or scoliosis, arthrogryposis, slender habitus and extremities). Other clinical features may include hernias, congenital heart defects, cryptorchidism and seizures.","definition_xrefs":["Orphanet:352490"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"autism spectrum disorder due to AUTS2 deficiency","secondary_identifiers":["UMLS:C4014435","DOID:0070056","GARD:17520","MEDGEN:862872","OMIM:615834"],"synonyms":[{"name":"ASD due to AUTS2 deficiency","type":"exact"},{"name":"AUTS2 syndrome","type":"exact"},{"name":"MRD26","type":"exact"},{"name":"autism spectrum disorder due to AUTS2 deficiency","type":"exact"},{"name":"autosomal dominant mental retardation 26","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 26","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 26","type":"exact"},{"name":"intellectual disability type 26","type":"exact"},{"name":"mental retardation, autosomal dominant 26","type":"exact"},{"name":"mental retardation, autosomal dominant type 26","type":"exact"}],"termid":"MONDO:0014361","xrefs":{"Monarch":{"xref_id":"0014361"}}}


id: PBO:0083835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); involved in DNA mismatch repair during slow growth; weak similarity to Msh1p; structural study suggests Hsm3p is a scaffold protein for Rpt1p-Rpt2p complex formation; ortholog of human 19S subunit S5b","termid":"PBO:0083835"}


id: PBO:0091753
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1987102delG","termid":"PBO:0091753"}


id: PBO:0064591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member J","termid":"PBO:0064591"}


id: PBO:0074298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted LY6/PLAUR domain containing 1","termid":"PBO:0074298"}


id: PBO:0069456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 721, pseudogene","termid":"PBO:0069456"}


id: PBO:0059474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3 pseudogene 1","termid":"PBO:0059474"}


id: MONDO:0859220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Ferguson-Bonni neurodevelopmental syndrome","secondary_identifiers":["UMLS:C5562065","MEDGEN:1794275","OMIM:619699"],"termid":"MONDO:0859220","xrefs":{"Monarch":{"xref_id":"0859220"}}}


id: GO:0009442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways by which allantoin is processed and converted to ureidoglycolate, and then into metabolically useful substrates. E. coli are able to utilize allantoin as a sole nitrogen source under anaerobic conditions by converting it to ureidoglycolate; this may be further metabolized to produce glyoxylate and thence 3-phosphoglycerate, or alternatively oxidized to oxolureate, which can converted into oxamate and carbamoylphosphate. This may then be further metabolized to CO2, NH4+ and ATP.","definition_xrefs":["MetaCyc:PWY0-41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin catabolic process","termid":"GO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin assimilation pathway","synonyms":[{"name":"allantoin catabolic process via ureidoglycolate","type":"exact"},{"name":"allantoin catabolism via ureidoglycolate","type":"exact"},{"name":"allantoin degradation pathway","type":"related"}],"termid":"GO:0009442"}


id: MONDO:0020144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebrovascular dementia (obsolete MONDO:0020144)","secondary_identifiers":["Orphanet:98549"],"synonyms":[{"name":"rare cerebrovascular dementia","type":"related"}],"termid":"MONDO:0020144","xrefs":{"Monarch":{"xref_id":"0020144"}}}


id: GO:0036359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of potassium ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["GOC:gap","PMID:15034090","PMID:25287933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal potassium excretion","synonyms":[{"name":"renal K(+) excretion","type":"exact"},{"name":"renal K+ elimination","type":"exact"},{"name":"renal potassium ion excretion","type":"exact"}],"termid":"GO:0036359"}


id: GO:0051396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nerve growth factor receptor activity (obsolete GO:0051396)","synonyms":[{"name":"activation of nerve growth factor receptor activity","type":"narrow"},{"name":"positive regulation of NGF receptor activity","type":"exact"},{"name":"stimulation of nerve growth factor receptor activity","type":"narrow"},{"name":"up regulation of nerve growth factor receptor activity","type":"exact"},{"name":"up-regulation of nerve growth factor receptor activity","type":"exact"},{"name":"upregulation of nerve growth factor receptor activity","type":"exact"}],"termid":"GO:0051396"}


id: GO:0047945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + pyruvate = 2-oxoglutaramate + L-alanine.","definition_xrefs":["RHEA:10400","EC:2.6.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-glutamine:pyruvate aminotransferase activity","secondary_identifiers":["MetaCyc:GLUTAMINE--PYRUVATE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R00576","Reactome:R-HSA-893616"],"synonyms":[{"name":"L-glutamine transaminase L","type":"related"},{"name":"gamma-glutaminyltransferase activity","type":"related"},{"name":"glutaminase II activity","type":"related"},{"name":"glutamine transaminase L activity","type":"broad"},{"name":"glutamine transaminase activity","type":"broad"},{"name":"glutamine--oxo-acid transaminase activity","type":"broad"},{"name":"glutamine--pyruvate aminotransferase activity","type":"broad"},{"name":"glutamine-alpha-keto acid transamidase activity","type":"broad"},{"name":"glutamine-alpha-keto acid transaminase activity","type":"broad"},{"name":"glutamine-keto acid aminotransferase activity","type":"broad"},{"name":"glutamine-oxo acid aminotransferase activity","type":"broad"},{"name":"glutamine-pyruvate transaminase activity","type":"broad"}],"termid":"GO:0047945"}


id: PBO:0109190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing or mRNA surveillance facor","termid":"PBO:0109190"}


id: GO:0019872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of streptomycin, a commonly used antibiotic in cell culture media; it acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"streptomycin metabolic process","termid":"GO:0046343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"streptomycin biosynthetic process","synonyms":[{"name":"streptomycin anabolism","type":"exact"},{"name":"streptomycin biosynthesis","type":"exact"},{"name":"streptomycin formation","type":"exact"},{"name":"streptomycin synthesis","type":"exact"}],"termid":"GO:0019872"}


id: PBO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2B (calcineurin B) regulatory subunit","termid":"PBO:0090343"}


id: GO:0070417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cold","synonyms":[{"name":"cellular response to cold stress","type":"exact"}],"termid":"GO:0070417"}


id: MONDO:0006991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sympathetic ophthalmia (obsolete MONDO:0006991)","termid":"MONDO:0006991","xrefs":{"Monarch":{"xref_id":"0006991"}}}


id: PBO:0078507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR4 interactor with leucine rich repeats","termid":"PBO:0078507"}


id: SO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The hAT terminal inverted repeat transposon superfamily elements were first found in maize (the Ac/Ds elements). Members of the hAT superfamily have TSDs of 8 bp, relatively short TIRs of 5–27 bp and overall lengths of less than 4 kb.","definition_xrefs":["PMID:11454746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hAT_TIR_transposon","synonyms":[{"name":"Ac transposon","type":"exact"},{"name":"Ac/Ds transposon","type":"exact"},{"name":"DTA transposon","type":"exact"},{"name":"Ds transposon","type":"exact"},{"name":"hAT TIR transposon","type":"exact"},{"name":"hAT transposon","type":"exact"},{"name":"hAT-Ac transposon","type":"exact"}],"termid":"SO:0002279"}


id: PBO:0028110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_bis(5'-adenosyl)-hexaphosphatase_activity","termid":"PBO:0028110"}


id: GO:1903136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cuprous ion, copper(1+).","definition_xrefs":["GOC:PARL","GOC:bf","GO_REF:0000067","PMID:24567322","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion binding","termid":"GO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cuprous ion binding","synonyms":[{"name":"Cu(+) binding","type":"exact"},{"name":"Cu(I) binding","type":"exact"},{"name":"copper(1+) binding","type":"exact"}],"termid":"GO:1903136"}


id: MOD:00499
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:3311742","PubMed:3578767","Unimod:128#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"5-iodoacetamidofluorescein","synonyms":[{"name":"5-Iodoacetamidofluorescein (Molecular Probe, Eugene, OR)","type":"related"},{"name":"Fluorescein","type":"related"}],"termid":"MOD:00499"}


id: PATO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's possessing a small, spike-like shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spur shaped","termid":"PATO:0002540"}


id: MONDO:0004121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete prostate small cell carcinoma (obsolete MONDO:0004121)","termid":"MONDO:0004121","xrefs":{"Monarch":{"xref_id":"0004121"}}}


id: PBO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 21","termid":"PBO:0060074"}


id: GO:0006957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, alternative pathway","secondary_identifiers":["Reactome:R-HSA-173736"],"synonyms":[{"name":"complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0006957"}


id: GO:0033078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway independent of the thymus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extrathymic T cell differentiation","synonyms":[{"name":"extrathymic T cell development","type":"related"}],"termid":"GO:0033078"}


id: GO:0003871
data:
  {"annotated_genes":["SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64297],"is_not":false,"summary":null,"term":"GO:0003871"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate.","definition_xrefs":["EC:2.1.1.14","RHEA:21196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity","termid":"GO:0042085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:HOMOCYSMET-RXN","KEGG_REACTION:R04405"],"synonyms":[{"name":"5-methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"MetE","type":"related"},{"name":"cobalamin-independent methionine synthase activity","type":"related"},{"name":"homocysteine methylase activity","type":"related"},{"name":"methionine synthase (cobalamin-independent) activity","type":"related"},{"name":"methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase activity","type":"related"},{"name":"methyltransferase, tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroyltriglutamate methyltransferase activity","type":"related"}],"termid":"GO:0003871","terms_by_termid":{"GO:0003871":null}}


id: GO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the mitochondrial membrane.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex (obsolete GO:0005753)","synonyms":[{"name":"mitochondrial respiratory chain complex V","type":"exact"}],"termid":"GO:0005753"}


id: GO:0051153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle cell differentiation.","definition_xrefs":["CL:0000737","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"}


id: GO:1902847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GO_REF:0000058","GOC:sjp","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of neuronal signal transduction","termid":"GO:1902847"}


id: PBO:0017984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex subunit Tom5 (predicted)","termid":"PBO:0017984"}


id: GO:0100011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that positively_regulates fever generation.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"},{"relation_name":"positively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of fever generation by prostaglandin secretion","termid":"GO:0100011"}


id: PBO:0083754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP; functions with methyltransferase Bud23p; predominantly nucleolar in distribution; required for 18S rRNA synthesis","termid":"PBO:0083754"}


id: PBO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lays_eggs_in","termid":"PBO:0034255"}


id: PR:Q10220
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcc1 gene.","definition_xrefs":["UniProtKB:Q10220","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit SPAC4H3.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.13","synonyms":[{"name":"Spom972h-pcc1","type":"exact"},{"name":"protein PCC1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10220"}


id: GO:1903214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial protein import","type":"related"},{"name":"regulation of mitochondrial translocation","type":"related"},{"name":"regulation of protein import into mitochondrion","type":"exact"},{"name":"regulation of protein targeting to mitochondria","type":"exact"},{"name":"regulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903214"}


id: SO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby a translocation in which one of the four broken ends loses a segment before re-joining.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_intrachromosomal_transposition","synonyms":[{"name":"deficient intrachromosomal transposition","type":"exact"}],"termid":"SO:0000062"}


id: GO:0070093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucagon secretion","termid":"GO:0070092"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glucagon secretion","synonyms":[{"name":"down regulation of glucagon secretion","type":"exact"},{"name":"down-regulation of glucagon secretion","type":"exact"},{"name":"downregulation of glucagon secretion","type":"exact"},{"name":"inhibition of glucagon secretion","type":"narrow"}],"termid":"GO:0070093"}


id: PBO:0072680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUFY1 antisense RNA 1","termid":"PBO:0072680"}


id: PBO:0040159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASIC4 antisense RNA 1","termid":"PBO:0040159"}


id: PBO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1B","termid":"PBO:0042566"}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: MONDO:0003380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial clear cell adenocarcinoma (obsolete MONDO:0003380)","termid":"MONDO:0003380","xrefs":{"Monarch":{"xref_id":"0003380"}}}


id: PBO:0035977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_acetylation_during_vegetative_growth","termid":"PBO:0035977"}


id: MONDO:1011285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic retinal atrophy in dogs due to a mutation in the BBS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic retinal atrophy, BBS2-related, dog","secondary_identifiers":["OMIA:002484-9615"],"synonyms":[{"name":"Bardet-Biedl syndrome 2, dog","type":"related"}],"termid":"MONDO:1011285","xrefs":{"Monarch":{"xref_id":"1011285"}}}


id: PBO:0089055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Adn2","termid":"PBO:0089055"}


id: PBO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cofilin","termid":"PBO:0002708"}


id: GO:2000988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemicellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"regulates","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of hemicellulose catabolic process","synonyms":[{"name":"regulation of hemicellulose catabolism","type":"exact"}],"termid":"GO:2000988"}


id: GO:0047739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cephalosporin C + H2O = acetate + deacetylcephalosporin C + H+.","definition_xrefs":["EC:3.1.1.41","RHEA:22596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cephalosporin-C deacetylase activity","secondary_identifiers":["KEGG_REACTION:R03062","MetaCyc:CEPHALOSPORIN-C-DEACETYLASE-RXN"],"synonyms":[{"name":"cephalosporin C acetyl-esterase activity","type":"related"},{"name":"cephalosporin C acetyl-hydrolase activity","type":"related"},{"name":"cephalosporin C acetylase activity","type":"related"},{"name":"cephalosporin C acetylesterase activity","type":"related"},{"name":"cephalosporin C deacetylase activity","type":"related"},{"name":"cephalosporin acetylesterase activity","type":"related"},{"name":"cephalosporin-C acetylhydrolase activity","type":"related"}],"termid":"GO:0047739"}


id: GO:0052025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host endomembrane system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell endomembrane system","synonyms":[{"name":"disruption by symbiont of host cell membrane","type":"broad"},{"name":"modification by symbiont of host cell membrane","type":"broad"},{"name":"symbiont-mediated disruption of host cell membrane","type":"broad"},{"name":"symbiont-mediated perturbation of host cell membrane","type":"broad"}],"termid":"GO:0052025"}


id: GO:0019011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication accessory factor (obsolete GO:0019011)","synonyms":[{"name":"DNA replication accessory factor","type":"exact"}],"termid":"GO:0019011"}


id: MONDO:0013428
data:
  {"annotated_genes":["SJAG_02394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87257],"is_not":false,"summary":null,"term":"MONDO:0013428"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the ORC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080513","MEDGEN:462447","GARD:15708","OMIM:613800","UMLS:C3151097"],"synonyms":[{"name":"MGORS2","type":"related"},{"name":"Meier-GORLIN syndrome 2","type":"related"},{"name":"Meier-Gorlin syndrome 2","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in ORC4","type":"exact"},{"name":"Meier-Gorlin syndrome type 2","type":"exact"},{"name":"ORC4 Meier-Gorlin syndrome","type":"exact"}],"termid":"MONDO:0013428","terms_by_termid":{"MONDO:0013428":null},"xrefs":{"Monarch":{"xref_id":"0013428"}}}


id: PBO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8 pseudogene 1","termid":"PBO:0048011"}


id: GO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of an alpha-1,2-linked mannose from the B-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["PMID:22160784","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of terminal mannose on B branch (obsolete GO:0036509)","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8B(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8B","type":"related"},{"name":"glycoprotein mannose trimming on B branch","type":"exact"}],"termid":"GO:0036509"}


id: PBO:0087796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi2/Snf2-related translocase, SUMO-Targeted Ubiquitin Ligase (STUbL); required for maintenance of NHEJ inhibition at telomeres; functions at telomeres to translocate and ubiquitinylate poly-sumoylated Rap1p for proteosomal degradation; plays role in antagonizing silencing during mating-type switching; only known STUbL with a translocase activity; contains RING finger domain; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087796"}


id: GO:0005943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class I phosphatidylinositol 3-kinase complex that possesses 1-phosphatidylinositol-4-phosphate 3-kinase activity; comprises a catalytic class IA phosphoinositide 3-kinase (PI3K) subunit and an associated SH2 domain-containing regulatory subunit that is a member of a family of related proteins often called p85 proteins. Through the interaction with the SH2-containing adaptor subunits, Class IA PI3K catalytic subunits are linked to tyrosine kinase signaling pathways.","definition_xrefs":["PMID:9255069","PMID:9759495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class I","termid":"GO:0097651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class IA","secondary_identifiers":["GO:0035030"],"synonyms":[{"name":"1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex","type":"exact"},{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA complex","type":"exact"},{"name":"class IA PI3K complex","type":"exact"},{"name":"phosphoinositide 3-kinase complex, class IA","type":"exact"}],"termid":"GO:0005943"}


id: PBO:0074209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 2","termid":"PBO:0074209"}


id: GO:0060905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency of induction of conjugation upon nitrogen starvation, the process in which a cell initiates conjugation with cellular fusion upon nitrogen starvation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"induction of conjugation upon nitrogen starvation","termid":"GO:0031142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"regulation of induction of conjugation upon nitrogen starvation","termid":"GO:0060905"}


id: PBO:0045696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 3","termid":"PBO:0045696"}


id: FYPO:0006027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal.","definition_xrefs":["PMID:11694585","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"actin cables present in increased numbers","synonyms":[{"name":"actin cables present in increased numbers during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during vegetative growth","type":"exact"},{"name":"extra actin cables present","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers","type":"exact"},{"name":"increased level of actin cables","type":"related"}],"termid":"FYPO:0006027"}


id: MOD:01834
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfoxide","termid":"MOD:01834"}


id: PBO:0053286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and calponin homology domains 1","termid":"PBO:0053286"}


id: PBO:0017936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase Pmt1","termid":"PBO:0017936"}


id: MONDO:0013084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 4","secondary_identifiers":["OMIM:613015","UMLS:C2751680","MEDGEN:414082"],"synonyms":[{"name":"NBLST4","type":"exact"},{"name":"neuroblastoma, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0013084","xrefs":{"Monarch":{"xref_id":"0013084"}}}


id: GO:0047734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-glycerol + H2O = sn-glycerol 3-phosphate + CMP + 2 H+.","definition_xrefs":["EC:3.6.1.16","RHEA:21692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CDP-glycerol diphosphatase activity","secondary_identifiers":["MetaCyc:CDP-GLYCEROL-PYROPHOSPHATASE-RXN","KEGG_REACTION:R00855"],"synonyms":[{"name":"CDP-glycerol phosphoglycerohydrolase activity","type":"related"},{"name":"CDP-glycerol pyrophosphatase activity","type":"exact"},{"name":"CDPglycerol diphosphatase activity","type":"related"},{"name":"CDPglycerol phosphoglycerohydrolase activity","type":"related"},{"name":"CDPglycerol pyrophosphatase activity","type":"related"},{"name":"cytidine diphosphoglycerol pyrophosphatase activity","type":"related"}],"termid":"GO:0047734"}


id: MONDO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine adnexa cancer","secondary_identifiers":["UMLS:C0153584","ICD9:183.9","DOID:11747","MEDGEN:509333","ICD9:183"],"termid":"MONDO:0001351","xrefs":{"Monarch":{"xref_id":"0001351"}}}


id: PBO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q37.3)","termid":"PBO:0047870"}


id: FYPO:0007310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002382"},{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation at centromere during vegetative growth","termid":"FYPO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K12 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K12 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007310"}


id: GO:0042399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["PMID:11823218","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ectoine metabolic process","synonyms":[{"name":"ectoine metabolism","type":"exact"}],"termid":"GO:0042399"}


id: MONDO:0016446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of cutis laxa that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutis laxa","termid":"MONDO:0016175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired cutis laxa","secondary_identifiers":["SCTID:19726003","UMLS:C0406549","GARD:20586","Orphanet:228285","MEDGEN:590500","icd11.foundation:807277512"],"synonyms":[{"name":"acquired cutis laxa","type":"exact"},{"name":"cutis laxa acquisita","type":"exact"}],"termid":"MONDO:0016446","xrefs":{"Monarch":{"xref_id":"0016446"}}}


id: PBO:0039661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit mu 1","termid":"PBO:0039661"}


id: MONDO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the endocervix. It is the most common type of endocervical adenocarcinoma. The neoplastic epithelium shows a pseudostratified architecture and the malignant cells have enlarged, elongated, and hyperchromatic nuclei.","definition_xrefs":["NCIT:C127907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocervical carcinoma","termid":"MONDO:0004259"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endocervical adenocarcinoma","secondary_identifiers":["SCTID:123842006","UMLS:C1263762","MEDGEN:688039","DOID:0050940","ONCOTREE:ECAD"],"synonyms":[{"name":"endocervical adenocarcinoma, usual type","type":"exact"},{"name":"endocervix adenocarcinoma","type":"exact"}],"termid":"MONDO:0000554","xrefs":{"Monarch":{"xref_id":"0000554"}}}


id: PBO:0047013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A16","termid":"PBO:0047013"}


id: PR:O14302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyk3 gene.","definition_xrefs":["UniProtKB:O14302","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinesis protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.06c","synonyms":[{"name":"Spom972h-cyk3","type":"exact"}],"termid":"PR:O14302"}


id: GO:1990063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. In E. coli it is composed of BamABCDE, of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE. BamA interacts directly with BamB and the BamCDE subcomplex.","definition_xrefs":["PMID:20378773","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"periplasmic side of cell outer membrane","termid":"GO:0031241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Bam protein complex","synonyms":[{"name":"OMP complex","type":"exact"}],"termid":"GO:1990063"}


id: GO:2000881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of starch catabolic process","synonyms":[{"name":"regulation of starch breakdown","type":"exact"},{"name":"regulation of starch catabolism","type":"exact"},{"name":"regulation of starch degradation","type":"exact"}],"termid":"GO:2000881"}


id: PBO:0074321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cell adhesion glycoprotein","termid":"PBO:0074321"}


id: PBO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complements E. coli PyrB","termid":"PBO:0034706"}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: PBO:0073143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 homolog A, COPII coat complex component","termid":"PBO:0073143"}


id: PBO:0034206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-upstream_in_neural_circuit_with","termid":"PBO:0034206"}


id: PBO:0051955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR2 and SSPN antisense RNA 1","termid":"PBO:0051955"}


id: PBO:0082444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type regulatory subunit of protein phosphatase 2A (PP2A); Rts1p and Cdc55p are alternative regulatory subunits for PP2A catalytic subunits, Pph21p and Pph22p; PP2A-Rts1p protects cohesin when recruited by Sgo1p to the pericentromere; highly enriched at centromeres in the absence of Cdc55p; required for maintenance of septin ring organization during cytokinesis, for ring disassembly in G1 and for dephosphorylation of septin, Shs1p; homolog of the mammalian B' subunit of PP2A","termid":"PBO:0082444"}


id: PBO:0047284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group I","termid":"PBO:0047284"}


id: PBO:0018276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4 (predicted)","termid":"PBO:0018276"}


id: PBO:0112868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase Fcy1","termid":"PBO:0112868"}


id: MONDO:0013429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PDE6B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 40","secondary_identifiers":["OMIM:613801","UMLS:C3151107","GARD:15709","MEDGEN:462457","DOID:0110375","ICD10CM:H35.5"],"synonyms":[{"name":"PDE6B retinitis pigmentosa","type":"exact"},{"name":"RP40","type":"exact"},{"name":"retinitis pigmentosa 40","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PDE6B","type":"exact"},{"name":"retinitis pigmentosa type 40","type":"exact"},{"name":"retinitis pigmentosa-40","type":"exact"}],"termid":"MONDO:0013429","xrefs":{"Monarch":{"xref_id":"0013429"}}}


id: FYPO:0002874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"premature protein localization to cell division site","termid":"FYPO:0007829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to medial cortex during vegetative growth","synonyms":[{"name":"advanced protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"faster protein localization to medial cortex during vegetative growth","type":"related"},{"name":"premature protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"premature protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"premature protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002874"}


id: PBO:0043564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL6A2 divergent transcript","termid":"PBO:0043564"}


id: MONDO:0018601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant myopia-midfacial retrusion-sensorineural hearing loss-rhizomelic dysplasia syndrome","secondary_identifiers":["GARD:21838","Orphanet:440354","MEDGEN:1801714","UMLS:C5680056"],"termid":"MONDO:0018601","xrefs":{"Monarch":{"xref_id":"0018601"}}}


id: MONDO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the rectum.","definition_xrefs":["NCIT:C135213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor","secondary_identifiers":["MEDGEN:1810164","UMLS:C5554035"],"synonyms":[{"name":"neuroendocrine tumor of rectum, well differentiated, low or intermediate grade","type":"exact"},{"name":"rectal well differentiated neuroendocrine neoplasm","type":"exact"},{"name":"rectal well-differentiated neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0015068","xrefs":{"Monarch":{"xref_id":"0015068"}}}


id: PBO:0069209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 464, pseudogene","termid":"PBO:0069209"}


id: PBO:0061176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 6-1","termid":"PBO:0061176"}


id: PBO:0017959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family Utp18 (predicted)","termid":"PBO:0017959"}


id: PBO:0028594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_activation_of_bipolar_cell_growth","termid":"PBO:0028594"}


id: GO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of ubiquitin ligase activity during the meiotic cell cycle.","definition_xrefs":["GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle (obsolete GO:0051440)","synonyms":[{"name":"meiotic APC regulator","type":"narrow"},{"name":"meiotic SCF complex regulator","type":"narrow"},{"name":"meiotic anaphase-promoting complex regulator","type":"narrow"},{"name":"meiotic ubiquitin ligase regulator","type":"related"},{"name":"meiotic ubiquitin-protein ligase regulator","type":"related"},{"name":"regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"regulation of ubiquitin-protein ligase activity during meiotic cell cycle","type":"related"}],"termid":"GO:0051440"}


id: MONDO:0007364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, type 2E","secondary_identifiers":["MESH:C535384","UMLS:C1852597","GARD:10135","MEDGEN:343844","OMIM:121070"],"synonyms":[{"name":"arthrogryposis, distal, type 2E","type":"exact"},{"name":"contractures of fingers and jaw","type":"related"}],"termid":"MONDO:0007364","xrefs":{"Monarch":{"xref_id":"0007364"}}}


id: PBO:0079380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 15","termid":"PBO:0079380"}


id: MONDO:0005961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membranes of any sinus cavity.","definition_xrefs":["NCIT:C35024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sinusitis","secondary_identifiers":["EFO:0007486","ICD9:461","SCTID:36971009","DOID:0050127","ICD9:461.9","MESH:D012852","MEDGEN:20772","UMLS:C0037199"],"termid":"MONDO:0005961","xrefs":{"Monarch":{"xref_id":"0005961"}}}


id: SO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A subsection of sequence with biological interest that is conserved in different proteins. They may or may not have functional or structural significance within the proteins in which they are found.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_conserved_region","synonyms":[{"name":"polypeptide conserved region","type":"exact"}],"termid":"SO:0100021"}


id: FYPO:0004271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell septum edging catabolic process","synonyms":[{"name":"normal cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"normal cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"normal cell septum edging catabolism","type":"exact"},{"name":"normal cell septum edging hydrolysis","type":"exact"}],"termid":"FYPO:0004271"}


id: GO:1990375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the baculum over time, from its formation to the mature structure.","definition_xrefs":["PMID:21471296","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baculum development","synonyms":[{"name":"os penis development","type":"exact"},{"name":"penile bone development","type":"exact"},{"name":"penis bone development","type":"exact"}],"termid":"GO:1990375"}


id: PBO:0050812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0050812"}


id: GO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of histamine following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:16730260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histamine production involved in inflammatory response","synonyms":[{"name":"histamine production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002349"}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_02583","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71696,73941],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-[protein] + (2E,6E)-farnesyl diphosphate = S-(2E,6E)-farnesyl-L-cysteinyl-[protein] + diphosphate.","definition_xrefs":["PMID:8621375","RHEA:13345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-17573","Reactome:R-HSA-2530501","Reactome:R-HSA-9647978","GO:0018223","EC:2.5.1.58"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: PBO:0075916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 8","termid":"PBO:0075916"}


id: GO:0016515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-13 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-13 receptor activity","synonyms":[{"name":"IL-13 receptor activity","type":"exact"},{"name":"IL-13R","type":"exact"}],"termid":"GO:0016515"}


id: PBO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit beta 1","termid":"PBO:0052601"}


id: GO:1902921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyvalerate).","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators","PMID:21705209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"},{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) metabolic process","termid":"GO:1902920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(hydroxyvalerate) formation","type":"exact"},{"name":"poly(hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902921"}


id: MONDO:0035668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated optic neuritis","termid":"MONDO:0044688"},{"relation_name":"is_a","term_name":"myelin oligodendrocyte glycoprotein antibody-associated disease","termid":"MONDO:1040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"isolated optic neuritis with anti-MOG antibodies","secondary_identifiers":["GARD:22377","Orphanet:592888"],"synonyms":[{"name":"Isolated optic neuritis with anti-myelin oligodendrocyte glycoprotein antibodies","type":"exact"}],"termid":"MONDO:0035668","xrefs":{"Monarch":{"xref_id":"0035668"}}}


id: MONDO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy with or without macular staphyloma","secondary_identifiers":["Orphanet:653709","UMLS:C4479651","MEDGEN:1381980","OMIM:617547"],"synonyms":[{"name":"RDMS","type":"related"},{"name":"retinal dystrophy with macular staphyloma","type":"exact"},{"name":"retinal dystrophy with or without macular staphyloma","type":"exact"}],"termid":"MONDO:0060507","xrefs":{"Monarch":{"xref_id":"0060507"}}}


id: MONDO:0006374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choriocarcinoma that develops in the placenta. It is the rarest form of gestational choriocarcinoma. Metastases to the mother and infant may occur.","definition_xrefs":["NCIT:C8893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta cancer","termid":"MONDO:0002178"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"placental choriocarcinoma","secondary_identifiers":["DOID:2024","MEDGEN:167782","EFO:1000479","UMLS:C0855173","SCTID:448401007"],"synonyms":[{"name":"choriocarcinoma of placenta","type":"related"},{"name":"choriocarcinoma of the placenta","type":"exact"},{"name":"placenta choriocarcinoma","type":"related"},{"name":"placenta choriocarcinoma (disease)","type":"exact"},{"name":"placental choriocarcinoma","type":"exact"}],"termid":"MONDO:0006374","xrefs":{"Monarch":{"xref_id":"0006374"}}}


id: MONDO:0003131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital mesoblastic nephroma (obsolete MONDO:0003131)","termid":"MONDO:0003131","xrefs":{"Monarch":{"xref_id":"0003131"}}}


id: SO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene caused by unequal crossing over at recombination.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene_by_unequal_crossing_over","synonyms":[{"name":"pseudogene by unequal crossing over","type":"exact"}],"termid":"SO:0000044"}


id: PBO:0017697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43 (predicted)","termid":"PBO:0017697"}


id: FYPO:0004043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"tetranucleate vegetative cell","synonyms":[{"name":"tetranucleate cells during vegetative growth","type":"exact"},{"name":"tetranucleate during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004043"}


id: GO:0006120
data:
  {"annotated_genes":["SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113245],"is_not":false,"summary":null,"term":"GO:0006120"}]},"cv_name":"biological_process","definition":"The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, NADH to ubiquinone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex I (NADH to ubiquinone)","type":"related"},{"name":"oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:0006120","terms_by_termid":{"GO:0006120":null}}


id: PBO:0027234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spherical_vegetative_cell","termid":"PBO:0027234"}


id: PBO:0057160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302e","termid":"PBO:0057160"}


id: MONDO:0017936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign Samaritan congenital myopathy is a rare, genetic, skeletal muscle disease characterized by severe neonatal hypotonia with respiratory insufficiency, delay in motor milestones, and dysmorphic features including bitemporal narrowing, epicanthal folds and hypertelorism. Affected individuals show gradual improvement in hypotonia and muscle weakness within the first two years of life resulting in minimal clinical manifestations in adulthood.","definition_xrefs":["Orphanet:324581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"benign Samaritan congenital myopathy","secondary_identifiers":["GARD:21445","MEDGEN:1666762","UMLS:C4749502"],"termid":"MONDO:0017936","xrefs":{"Monarch":{"xref_id":"0017936"}}}


id: PR:Q9P7C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug109 gene.","definition_xrefs":["UniProtKB:Q9P7C2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 109 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.02c","synonyms":[{"name":"Spom972h-mug109","type":"exact"}],"termid":"PR:Q9P7C2"}


id: PBO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previusly annotated as dubious","termid":"PBO:0002317"}


id: GO:1901249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung goblet cell differentiation","synonyms":[{"name":"regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901249"}


id: SO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The untranslated sequence separating the 'cistrons' of multicistronic mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"untranslated_region_polycistronic_mRNA","synonyms":[{"name":"untranslated region polycistronic mRNA","type":"exact"}],"termid":"SO:0000242"}


id: PBO:0060542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 2","termid":"PBO:0060542"}


id: GO:0150201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["GOC:aruk","PMID:30280653","PMID:29377008","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"part_of","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"positively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"}


id: MONDO:0011892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any generalized epilepsy in which the cause of the disease is a mutation in the CACNB4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 9","secondary_identifiers":["MEDGEN:413424","OMIM:607682","UMLS:C2750887","DOID:0111323"],"synonyms":[{"name":"CACNB4 generalised epilepsy","type":"exact"},{"name":"CACNB4 generalized epilepsy","type":"exact"},{"name":"EIG9","type":"related"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 9","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 9","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 6","type":"related"},{"name":"generalised epilepsy caused by mutation in CACNB4","type":"exact"},{"name":"generalized epilepsy caused by mutation in CACNB4","type":"exact"},{"name":"susceptibility to idiopathic generalised epilepsy 9","type":"related"},{"name":"susceptibility to idiopathic generalized epilepsy 9","type":"related"}],"termid":"MONDO:0011892","xrefs":{"Monarch":{"xref_id":"0011892"}}}


id: PBO:0034626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cell_separation_after_cytokinesis","termid":"PBO:0034626"}


id: GO:0098806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An RNA interference pathway in which a miRNA binding to mRNA triggers shortening of the poly(A) tail of a nuclear-transcribed mRNA, resulting in destabilization of the mRNA and a reduction the amount of translated transcript.","definition_xrefs":["PMID:21118121","PMID:23209154","GOC:dos","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated gene silencing by mRNA deadenylation (obsolete GO:0098806)","synonyms":[{"name":"deadenylation involved in gene silencing by miRNA","type":"exact"},{"name":"mRNA deadenylation-mediated gene silencing by miRNA","type":"exact"}],"termid":"GO:0098806"}


id: PBO:0064192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 activating protein","termid":"PBO:0064192"}


id: PBO:0082667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Ctf19 complex and the COMA subcomplex; involved in kinetochore-microtubule mediated chromosome segregation; binds to centromere DNA; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-H and fission yeast fta3","termid":"PBO:0082667"}


id: PBO:0033772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pointed_nucleus_during_mitotic_interphase","termid":"PBO:0033772"}


id: FYPO:0006472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more proteins involved in amino acid biosynthesis is decreased in response to starvation for one or more amino acids.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation of amino acid biosynthesis proteins during vegetative growth","termid":"FYPO:0006445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation","synonyms":[{"name":"decreased translation of amino acid biosynthesis genes in response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis mRNAs in response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins during cellular response to amino acid starvation","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased translation of amino acid biosynthesis proteins in response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced translation of amino acid biosynthesis proteins in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006472"}


id: MONDO:0019528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammatory pseudotumor (IPT) of the liver is a rare benign tumor-like lesion.","definition_xrefs":["Orphanet:90003"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"IgG4-related disease","termid":"MONDO:0017287"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory pseudotumor of the liver","secondary_identifiers":["GARD:19098"],"synonyms":[{"name":"IgG4-related hepatopathy","type":"exact"}],"termid":"MONDO:0019528","xrefs":{"Monarch":{"xref_id":"0019528"}}}


id: GO:0005557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lymphocyte antigen (obsolete GO:0005557)","synonyms":[{"name":"lymphocyte antigen","type":"exact"}],"termid":"GO:0005557"}


id: MONDO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic congenital hypothyroidism is a type of primary congenital hypothyroidism whose cause and prevalence are unknown.","definition_xrefs":["Orphanet:95717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital hypothyroidism","secondary_identifiers":["GARD:19298","MEDGEN:901252","SCTID:717334008","UMLS:C4273913"],"termid":"MONDO:0019858","xrefs":{"Monarch":{"xref_id":"0019858"}}}


id: PBO:0079015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (TCA) 3-1","termid":"PBO:0079015"}


id: GO:1902917
data:
  {"annotated_genes":["SJAG_04509","SJAG_00514","SJAG_01794","SJAG_03453","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88244,90225,91205,93839,111753],"is_not":false,"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating projection assembly.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:12455985","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"part_of","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mating projection assembly","type":"narrow"},{"name":"activation of mating projection biogenesis","type":"related"},{"name":"positive regulation of mating projection biogenesis","type":"related"},{"name":"up regulation of mating projection assembly","type":"exact"},{"name":"up regulation of mating projection biogenesis","type":"related"},{"name":"up-regulation of mating projection assembly","type":"exact"},{"name":"up-regulation of mating projection biogenesis","type":"related"},{"name":"upregulation of mating projection assembly","type":"exact"},{"name":"upregulation of mating projection biogenesis","type":"related"}],"termid":"GO:1902917","terms_by_termid":{"GO:1902917":null}}


id: PBO:0078579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53B, pseudogene","termid":"PBO:0078579"}


id: GO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate.","definition_xrefs":["EC:2.4.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"protein xylosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1878002","RHEA:50192","MetaCyc:2.4.2.26-RXN"],"synonyms":[{"name":"UDP-D-xylose:core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:core protein xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-xylose-core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"peptide O-xylosyltransferase activity","type":"exact"},{"name":"uridine diphosphoxylose-core protein beta-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-protein xylosyltransferase activity","type":"related"}],"termid":"GO:0030158"}


id: GO:0050570
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(phosphooxy)-L-threonine + NAD+ = 3-amino-2-oxopropyl phosphate + CO2 + NADH.","definition_xrefs":["RHEA:32275","EC:1.1.1.262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-hydroxythreonine-4-phosphate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13179"],"synonyms":[{"name":"L-threonine 4-phosphate dehydrogenase activity","type":"related"},{"name":"NAD(+)-dependent threonine 4-phosphate dehydrogenase activity","type":"related"},{"name":"NAD+-dependent threonine 4-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0050570"}


id: PBO:0089486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase Abz2","termid":"PBO:0089486"}


id: PBO:0034518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_envelope_during_vegetative_growth","termid":"PBO:0034518"}


id: PBO:0005032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Gem1 (predicted)","termid":"PBO:0005032"}


id: MONDO:1012118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypoplasia of mammary gland, non-human animal","termid":"MONDO:1011677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of mammary gland, sheep","secondary_identifiers":["OMIA:000529-9940"],"termid":"MONDO:1012118","xrefs":{"Monarch":{"xref_id":"1012118"}}}


id: _global:acts_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_positive_effect","termid":"_global:acts_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_positive_effect","secondary_identifiers":["RO:0004034"],"termid":"_global:acts_upstream_of,_positive_effect"}


id: PBO:0055007
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2422","termid":"PBO:0055007"}


id: GO:0141032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by reorganizing the actin filaments, in a way that keeps the total filementous actin remains approximately constant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:31130928","PMID:22212282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin filament reorganization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament rearrangement","type":"exact"},{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament reorganization","type":"exact"}],"termid":"GO:0141032"}


id: SO:0000241
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR bordered by the terminal and initial codons of two CDSs in a polycistronic transcript. Every UTR is either 5', 3' or internal.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_UTR","synonyms":[{"name":"internal UTR","type":"exact"}],"termid":"SO:0000241"}


id: MONDO:0000509
data:
  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id: PR:000050570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septation initiation network scaffold protein cdc11 (Schizosaccharomyces pombe) that includes phosphorylated residues at a level greater than the interphase-observed phosphorylated form, and is only observed during mitotic anaphase.","definition_xrefs":["PomBase:VW","PMID:12546793","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc11/HyperPhos","pombase_gene_id":"SPCC1739.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: septation initiation network scaffold protein cdc11 hyperphosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc11/HyperPhos+","type":"exact"},{"name":"cdc11/HyperPhos","type":"exact"},{"name":"cdc11p hyperphosphorylated form (3) (Schizosaccharomyces pombe)","type":"related"}],"termid":"PR:000050570"}


id: GO:0019085
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell.","definition_xrefs":["GOC:bf","GOC:jh2","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"early viral transcription","synonyms":[{"name":"immediate early viral mRNA transcription","type":"related"}],"termid":"GO:0019085"}


id: GO:0006598
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyamine breakdown","type":"exact"},{"name":"polyamine catabolism","type":"exact"},{"name":"polyamine degradation","type":"exact"}],"termid":"GO:0006598","terms_by_termid":{"GO:0009447":null}}


id: PBO:0050984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 56","termid":"PBO:0050984"}


id: PBO:0057945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-1","termid":"PBO:0057945"}


id: PBO:0074728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 86","termid":"PBO:0074728"}


id: PBO:0040210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 3","termid":"PBO:0040210"}


id: MONDO:0011236
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86853,86854],"is_not":false,"summary":null,"term":"MONDO:0011236"}]},"cv_name":"mondo","definition":"Hyperinsulism due to glucokinase deficiency (HIGCK) is a form of diazoxide-sensitive diffuse hyperinsulinism, caused by a lowered threshold for insulin release, characterized by an excessive/ uncontrolled insulin secretion (inappropriate for the level of glycemia) and recurrent episodes of profound hypoglycemia induced by fasting and protein rich meals, requiring rapid and intensive treatment to prevent neurological sequelae.","definition_xrefs":["Orphanet:79299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"hyperinsulinism due to glucokinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1865290","SCTID:717182006","MESH:C538374","GARD:2818","DOID:0070216","MEDGEN:355435","OMIM:602485"],"synonyms":[{"name":"HHF3","type":"related"},{"name":"hyperinsulinemic hypoglycemia due to glucokinase deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia familial 3","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 3","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, type 3","type":"exact"}],"termid":"MONDO:0011236","terms_by_termid":{"MONDO:0011236":null},"xrefs":{"Monarch":{"xref_id":"0011236"}}}


id: PBO:0087514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heteropentameric Replication factor C (RF-C); which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087514"}


id: FYPO:0001687
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing benomyl.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on benomyl","synonyms":[{"name":"normal cell population growth in presence of benomyl","type":"exact"},{"name":"normal cell population growth on benomyl","type":"exact"},{"name":"normal cell population growth on methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"normal cellular response to benomyl","type":"related"},{"name":"normal growth on methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"},{"name":"normal vegetative cell population growth on benomyl","type":"exact"}],"termid":"FYPO:0001687"}


id: SO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-regulatory element, conserved sequence YYC+1TTTYY, and spans -2 to +6 relative to +1 TSS. It is present in most ribosomal protein genes in Drosophila and mammals but not in the yeast Saccharomyces cerevisiae. Resembles the initiator (TCAKTY in Drosophila) but functionally distinct from initiator.","definition_xrefs":["SO:myl","PMID:20801935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCT_motif","synonyms":[{"name":"TCT element","type":"exact"},{"name":"polypyrimidine initiator","type":"exact"}],"termid":"SO:0001959"}


id: PBO:0076117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 1","termid":"PBO:0076117"}


id: PR:O13622
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mss116 gene.","definition_xrefs":["UniProtKB:O13622","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mss116, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.04","synonyms":[{"name":"Spom972h-mss116","type":"exact"}],"termid":"PR:O13622"}


id: FYPO:0008274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which glutamate biosynthesis is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased glutamate biosynthesis","termid":"FYPO:0008274"}


id: GO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-valine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-valine modification","termid":"GO:0018213"}


id: MONDO:0007482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dyschondrosteosis - nephritis is characterized by the association of short stature due to mesomelic shortening of the limbs and Madelung deformity, with hereditary nephritis.","definition_xrefs":["Orphanet:1765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyschondrosteosis-nephritis syndrome","secondary_identifiers":["UMLS:C1851986","GARD:1994","MEDGEN:342135","OMIM:127350","MESH:C565080"],"synonyms":[{"name":"dyschondrosteosis and nephritis","type":"related"},{"name":"dyschondrosteosis nephritis","type":"related"},{"name":"mesomelic shortening and hereditary nephritis","type":"related"}],"termid":"MONDO:0007482","xrefs":{"Monarch":{"xref_id":"0007482"}}}


id: FYPO:0000839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, has no septum, is elongated, and is inviable. Progression through the mitotic cell cycle is arrested in all inviable elongated mononucleate aseptate cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"inviable elongated aseptate cell","termid":"FYPO:0002066"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"elongated mononucleate aseptate vegetative cell","termid":"FYPO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell","secondary_identifiers":["FYPO:0004923"],"synonyms":[{"name":"cell cycle-arrested elongated inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest","type":"exact"},{"name":"elongated mononucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with arrested cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest","type":"exact"},{"name":"lethal; elongated mononucleate aseptate cell","type":"exact"},{"name":"long aseptate mononucleate cell","type":"exact"},{"name":"mitotic cell cycle arrest with elongated inviable mononucleate aseptate cell","type":"exact"}],"termid":"FYPO:0000839"}


id: PBO:0051518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 family member 10","termid":"PBO:0051518"}


id: MONDO:0019501
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013788"}]},"cv_name":"mondo","definition":"A syndromic diseae characterized by the association of sensorineural deafness (usually congenital) with retinitis pigmentosa and progressive vision loss.","definition_xrefs":["Orphanet:886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0271097","NORD:1816","GARD:7843","ICD10CM:H35.5","icd11.foundation:1452641873","MedDRA:10063396","DOID:0050439","MEDGEN:78754","MESH:D052245","NANDO:1200941","NCIT:C85217","OMIMPS:276900"],"synonyms":[{"name":"Graefe-Usher syndrome","type":"related"},{"name":"Hallgren syndrome","type":"related"},{"name":"USH","type":"exact"},{"name":"Usher's syndrome","type":"exact"},{"name":"deafness-retinitis pigmentosa syndrome","type":"narrow"},{"name":"dystrophia retinae pigmentosa-dysostosis syndrome","type":"related"},{"name":"retinitis pigmentosa-deafness syndrome","type":"narrow"},{"name":"ush","type":"exact"}],"termid":"MONDO:0019501","terms_by_termid":{"MONDO:0013788":null},"xrefs":{"Monarch":{"xref_id":"0019501"}}}


id: GO:0075252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uredospore formation","synonyms":[{"name":"regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075252"}


id: PBO:0054054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1396","termid":"PBO:0054054"}


id: MONDO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 6q23.","definition_xrefs":["DOID:0110385","PMID:22083234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 63","secondary_identifiers":["OMIM:614494","MEDGEN:482632","UMLS:C3281002","GARD:15810","ICD10CM:H35.5"],"synonyms":[{"name":"RP63","type":"exact"},{"name":"retinitis pigmentosa 63","type":"exact"},{"name":"retinitis pigmentosa type 63","type":"exact"}],"termid":"MONDO:0013780","xrefs":{"Monarch":{"xref_id":"0013780"}}}


id: GO:0050153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-hydroxydecanoate + NAD+ = 10-oxodecanoate + H+ + NADH.","definition_xrefs":["RHEA:20880","EC:1.1.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"omega-hydroxydecanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03886","MetaCyc:OMEGA-HYDROXYDECANOATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"10-hydroxydecanoate:NAD+ 10-oxidoreductase activity","type":"related"},{"name":"w-hydroxydecanoate dehydrogenase activity","type":"exact"}],"termid":"GO:0050153"}


id: MONDO:0014892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"micrognathia-recurrent infections-behavioral abnormalities-mild intellectual disability syndrome","secondary_identifiers":["UMLS:C4310740","GARD:17850","OMIM:617061","DOID:0070074","Orphanet:476126","MEDGEN:934707"],"synonyms":[{"name":"MEBAS","type":"exact"},{"name":"MRD44","type":"exact"},{"name":"autosomal dominant intellectual disability 44","type":"exact"},{"name":"autosomal dominant mental retardation 44","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 44","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 44, with microcephaly","type":"exact"},{"name":"intellectual disability, autosomal dominant 44","type":"related"},{"name":"mental retardation, autosomal dominant 44","type":"related"},{"name":"mercer-Ba syndrome","type":"exact"}],"termid":"MONDO:0014892","xrefs":{"Monarch":{"xref_id":"0014892"}}}


id: PBO:0062041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 11","termid":"PBO:0062041"}


id: GO:0052574
data:
  {"annotated_genes":["SJAG_01784","SJAG_02951","SJAG_02954","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109971,114103,114110,114111],"is_not":false,"summary":null,"term":"GO:0052574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-galactose, a substance composed of D-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-galactose metabolic process","termid":"GO:0052573"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-galactose biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-7344"],"synonyms":[{"name":"UDP-D-galactopyranose biosynthesis","type":"exact"},{"name":"UDP-D-galactopyranose biosynthetic process","type":"exact"},{"name":"UDP-D-galactose biosynthesis","type":"exact"},{"name":"UDP-D-galactose biosynthetic process","type":"exact"},{"name":"UDP-alpha-D-galactose biosynthesis","type":"exact"},{"name":"UDP-galactose biosynthesis","type":"exact"},{"name":"uridine diphosphate galactose biosynthesis","type":"exact"},{"name":"uridine diphosphate galactose biosynthetic process","type":"exact"}],"termid":"GO:0052574","terms_by_termid":{"GO:0052574":null}}


id: PBO:0030886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_metabolism_phenotype_during_vegetative_growth","termid":"PBO:0030886"}


id: PATO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being interrupted of its normal course.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted","termid":"PATO:0001507"}


id: GO:0060906
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108871],"is_not":false,"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of non-coding RNA-mediated heterochromatin formation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0010964"},{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"negative regulation of gene silencing by regulatory ncRNA","termid":"GO:0060967"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"negative regulation of regulatory ncRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of RNAi-mediated heterochromatin assembly","type":"exact"},{"name":"negative regulation of chromatin silencing by small RNA","type":"related"},{"name":"negative regulation of heterochromatin assembly by small RNA","type":"narrow"},{"name":"negative regulation of ncRNA-mediated heterochromatin formation","type":"exact"},{"name":"negative regulation of small non-coding RNA-mediated heterochromatin formation","type":"narrow"}],"termid":"GO:0060906","terms_by_termid":{"GO:0060906":null}}


id: PATO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per kilogram of solvent.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Osmolarity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osmolality","termid":"PATO:0002027"}


id: PBO:0043627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP1 pseudogene 1","termid":"PBO:0043627"}


id: PBO:0004011
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome","termid":"PBO:0004011"}


id: PBO:0025441
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G6PD deficiency","termid":"PBO:0025441"}


id: PR:Q10275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mba1 gene.","definition_xrefs":["UniProtKB:Q10275","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.11","synonyms":[{"name":"Spom972h-mba1","type":"exact"}],"termid":"PR:Q10275"}


id: SO:1000152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertional duplication where a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertional_duplication","termid":"SO:1000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_insertional_duplication","synonyms":[{"name":"(Drosophila)eDp","type":"related"},{"name":"uninverted insertional duplication","type":"exact"}],"termid":"SO:1000152"}


id: PBO:0052810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 76","termid":"PBO:0052810"}


id: PBO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis I","termid":"PBO:0007604"}


id: PBO:0060949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I C","termid":"PBO:0060949"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: PBO:0043776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A2","termid":"PBO:0043776"}


id: GO:0043611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoprene, C5H8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprene metabolic process","synonyms":[{"name":"2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"hemiterpene metabolic process","type":"exact"},{"name":"hemiterpene metabolism","type":"exact"},{"name":"isoprene metabolism","type":"exact"}],"termid":"GO:0043611"}


id: PBO:0003007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, trunucated","termid":"PBO:0003007"}


id: PBO:0079210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 2","termid":"PBO:0079210"}


id: PBO:0066279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member C, pseudogene","termid":"PBO:0066279"}


id: PBO:0088218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein in duplicated region/dubious, longer version of SJAG_01091","termid":"PBO:0088218"}


id: MONDO:0013604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myopia (disease) in which the cause of the disease is a mutation in the ZNF644 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 21, autosomal dominant","secondary_identifiers":["OMIM:614167","UMLS:C3279997","MEDGEN:481627"],"synonyms":[{"name":"MYP21","type":"related"},{"name":"ZNF644 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in ZNF644","type":"exact"},{"name":"myopia 21, autosomal dominant","type":"exact"}],"termid":"MONDO:0013604","xrefs":{"Monarch":{"xref_id":"0013604"}}}


id: PBO:0039755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein","termid":"PBO:0039755"}


id: PBO:0068378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 175","termid":"PBO:0068378"}


id: GO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selected cleavage of the Leu6-Lys7 bond in the pheromone alpha-mating factor.","definition_xrefs":["EC:3.4.23.35"],"gene_count":0,"genotype_count":0,"name":"obsolete barrierpepsin activity (obsolete GO:0004191)","synonyms":[{"name":"Bar proteinase activity","type":"narrow"},{"name":"barrier proteinase activity","type":"related"},{"name":"barrierpepsin activity","type":"exact"},{"name":"extracellular 'barrier' protein activity","type":"related"}],"termid":"GO:0004191"}


id: PBO:0045357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidase 1","termid":"PBO:0045357"}


id: GO:0102953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionate + hypoglycin A = L-cysteinylglycine + hypoglycin B.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"hypoglycin A gamma-glutamyl transpeptidase activity","secondary_identifiers":["MetaCyc:RXN-9157"],"termid":"GO:0102953"}


id: GO:0097475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.","definition_xrefs":["CL:0000100","GOC:yaf","PMID:20711475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron migration","termid":"GO:0097475"}


id: PBO:0071128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 130","termid":"PBO:0071128"}


id: PBO:0002747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202 (predicted)","termid":"PBO:0002747"}


id: PBO:0072044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 14","termid":"PBO:0072044"}


id: PBO:0088878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Cbp3","termid":"PBO:0088878"}


id: MONDO:0021368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the major salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of salivary gland","termid":"MONDO:0021357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of major salivary gland","secondary_identifiers":["UMLS:C0345599","NCIT:C4407","MEDGEN:83383","SCTID:126787005"],"synonyms":[{"name":"major salivary gland neoplasm","type":"exact"},{"name":"major salivary gland neoplasm (disease)","type":"exact"},{"name":"major salivary gland tumor","type":"exact"},{"name":"major salivary gland tumour","type":"exact"},{"name":"neoplasm of major salivary gland","type":"exact"},{"name":"neoplasm of the Major salivary gland","type":"exact"},{"name":"tumor of Major salivary gland","type":"exact"},{"name":"tumor of major salivary gland","type":"exact"},{"name":"tumor of the Major salivary gland","type":"exact"},{"name":"tumour of Major salivary gland","type":"exact"},{"name":"tumour of major salivary gland","type":"exact"},{"name":"tumour of the Major salivary gland","type":"exact"}],"termid":"MONDO:0021368","xrefs":{"Monarch":{"xref_id":"0021368"}}}


id: PBO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformed_into","termid":"PBO:0017417"}


id: FYPO:0000128
data:
  {"alleles_by_uniquename":{"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"},"SJAG_03164:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03164","name":"ura4delta","uniquename":"SJAG_03164:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119519,119518,119520,119846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000747"},{"annotations":[119847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001012"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell requires a particular organic compound, which is not required by a wild-type cell for its growth. Auxotrophy usually results from a cell's inability to synthesize the compound.","definition_xrefs":["PATO:0000422","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_03164":null},"genotype_count":4,"genotypes_by_uniquename":{"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domE(S427>stop)","display_uniquename":"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-1","expression":"Not assayed or wild type"}]}]},"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domK(Q262A aa)","display_uniquename":"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-2","expression":"Not assayed or wild type"}]}]},"ade6delta":{"display_name":"ade6delta","display_uniquename":"ade6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-3","expression":"Null"}]}]},"ura4delta":{"display_name":"ura4delta","display_uniquename":"ura4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03164:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"auxotrophy","references_by_uniquename":{"PMID:19330769":null,"PMID:21905090":null},"single_locus_annotated_genes":["SJAG_01081","SJAG_03164"],"single_locus_genotype_uniquenames":["ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","ade6delta","ura4delta","ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"auxotrophic growth","type":"exact"},{"name":"auxotrophy during mitotic cell cycle","type":"related"},{"name":"auxotrophy during vegetative growth","type":"exact"}],"termid":"FYPO:0000128","terms_by_termid":{"FYPO:0000747":null,"FYPO:0001012":null}}


id: PBO:0017426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_integral_part","termid":"PBO:0017426"}


id: GO:1903399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of m7G(5')pppN diphosphatase activity.","definition_xrefs":["PMID:22323607","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of m7G(5')pppN diphosphatase activity (obsolete GO:1903399)","synonyms":[{"name":"activation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"narrow"},{"name":"activation of M(7)G(5')pppN pyrophosphatase activity","type":"narrow"},{"name":"activation of decapase activity","type":"related"},{"name":"activation of m7G(5')pppN diphosphatase activity","type":"narrow"},{"name":"activation of m7G(5')pppN pyrophosphatase activity","type":"narrow"},{"name":"positive regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"positive regulation of decapase activity","type":"related"},{"name":"positive regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up regulation of decapase activity","type":"related"},{"name":"up regulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"up regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up-regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up-regulation of decapase activity","type":"related"},{"name":"up-regulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"up-regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"upregulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"upregulation of decapase activity","type":"related"},{"name":"upregulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"upregulation of m7G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:1903399"}


id: PBO:0053866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1141","termid":"PBO:0053866"}


id: MONDO:0022666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to fruit of the Cassava plant (Manihot esculenta), contains linamarin, a cyanogenic glucoside. If a person eats improperly prepared products, cassavism (locally termed konzo or mantakassa) may develop, which features toxic ataxic neuropathy.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassavism","synonyms":[{"name":"konzo","type":"exact"},{"name":"mantakassa","type":"exact"}],"termid":"MONDO:0022666","xrefs":{"Monarch":{"xref_id":"0022666"}}}


id: MONDO:0005166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well-circumscribed, bone-forming neoplasm predominantly composed of lamellar bone. It usually arises from the calvarial, facial, or jaw bones. It is usually asymptomatic but it may cause local swelling or obstruction of the paranasal sinuses. Asymptomatic cases have an indolent clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoma","secondary_identifiers":["MEDGEN:18220","ICDO:9180/0","NCIT:C3296","HP:0100246","MESH:D010016","EFO:0002423","UMLS:C0029440","SCTID:302858007"],"synonyms":[{"name":"osteoma","type":"exact"},{"name":"osteoma (disease)","type":"exact"},{"name":"osteoma, benign","type":"exact"}],"termid":"MONDO:0005166","xrefs":{"Monarch":{"xref_id":"0005166"}}}


id: PBO:0017746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter Sut1","termid":"PBO:0017746"}


id: FYPO:0000328
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[119788,119792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119521],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[119782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects protein metabolism in the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein metabolic process during vegetative growth","references_by_uniquename":{"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610","SJAG_01787","SJAG_04697"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta","gms1delta"],"synonyms":[{"name":"abnormal cellular protein metabolic process during vegetative growth","type":"exact"},{"name":"abnormal protein metabolic process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000328","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2 like","termid":"PBO:0075505"}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_03217","SJAG_00678","SJAG_05220","SJAG_03437","SJAG_01837","SJAG_05319","SJAG_02346","SJAG_02814","SJAG_01775","SJAG_03220","SJAG_03683","SJAG_01211","SJAG_00794","SJAG_03926","SJAG_01371","SJAG_04508","SJAG_00918","SJAG_00418","SJAG_01278","SJAG_01805","SJAG_02731","SJAG_03989","SJAG_04076","SJAG_01224","SJAG_03327","SJAG_05266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88218,94191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[117075],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[109269,113619,114487,110276,102799,117310,98985,110744,98264,89500,95921,109525,105850,100888,90105,110701,101701,116316,91341,107878,95676,108199,94172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: FYPO:0006395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006395"}


id: PBO:0066773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 71","termid":"PBO:0066773"}


id: PBO:0027136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-circularized_chromosome_during_mitotic_G2_phase","termid":"PBO:0027136"}


id: GO:0060361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air, usually by means of active wing movement.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight","termid":"GO:0060361"}


id: PBO:0005852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated protein Pal1","termid":"PBO:0005852"}


id: GO:0110065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic telomere clustering during interphase.","definition_xrefs":["PMID:25778919","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"interphase mitotic telomere clustering","termid":"GO:0120110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of interphase mitotic telomere clustering","synonyms":[{"name":"regulation of mitotic telomere clustering during interphase","type":"exact"}],"termid":"GO:0110065"}


id: PBO:0086955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of mitochondrial proline metabolism; tethered with Put7p to inner mitochondrial membrane in large hetero-oligomeric complex, abundance of which is regulated by proline; involved in mitochondrial proline homeostasis and cellular redox balance; null exhibits pronounced defect in proline utilization, and can be functionally complemented by expression of human homolog MCUR1","termid":"PBO:0086955"}


id: GO:1900375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:2004420","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900375)","synonyms":[{"name":"activation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of inositol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of myo-inositol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of myo-inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of vitamin Bh biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of vitamin Bh biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900375"}


