# terms

id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: GO:1904009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["PMID:20704590","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium glutamate (obsolete GO:1904009)","termid":"GO:1904009"}


id: PBO:0038646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 1","termid":"PBO:0038646"}


id: PBO:0091216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm1, partial, adjacent to genomic sequence gap","termid":"PBO:0091216"}


id: GO:0009066
data:
  {"annotated_genes":["SJAG_02689","SJAG_00309","SJAG_03881","SJAG_02450","SJAG_03306","SJAG_02972","SJAG_03614","SJAG_00869","SJAG_02388","SJAG_04042","SJAG_04425","SJAG_02290","SJAG_00234","SJAG_02832","SJAG_03152","SJAG_01404","SJAG_00396","SJAG_01574","SJAG_03556","SJAG_04149","SJAG_04688","SJAG_06635","SJAG_03141","SJAG_03312","SJAG_02293","SJAG_03671","SJAG_00395","SJAG_01630","SJAG_03985","SJAG_01061","SJAG_01955","SJAG_01466","SJAG_03712","SJAG_00432","SJAG_04549","SJAG_00881","SJAG_02276","SJAG_00107","SJAG_00830","SJAG_03659","SJAG_00502","SJAG_00714","SJAG_04098","SJAG_04459"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106368,111479,65634,68800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[72781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006528"},{"annotations":[78121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[71319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[111177,102522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[108697,111484,103660,113642,110819,104141,91042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[101034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[80470,58783,78680,77278,79590,78230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[98881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[96719,77032,65115,70556,77837,75431,64469,113838,76459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[72265,71454,74918,79406,112359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[113096,103756,111053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"},{"annotations":[77374,106370,70118,64676,112360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[72375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00396":null,"SJAG_00432":null,"SJAG_00502":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02276":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02388":null,"SJAG_02450":null,"SJAG_02689":null,"SJAG_02832":null,"SJAG_02972":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03556":null,"SJAG_03614":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_03985":null,"SJAG_04042":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04549":null,"SJAG_04688":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"aspartate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8963693"],"synonyms":[{"name":"aspartate family amino acid metabolism","type":"exact"}],"termid":"GO:0009066","terms_by_termid":{"GO:0006528":null,"GO:0006532":null,"GO:0006533":null,"GO:0006555":null,"GO:0006567":null,"GO:0009086":null,"GO:0009088":null,"GO:0019280":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0070981":null,"GO:0071266":null,"GO:1901705":null}}


id: PR:O14417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle assembly checkpoint protein MAD2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.06","secondary_identifiers":["PR:000035572","UniProtKB:O14417"],"synonyms":[{"name":"Spom972h-MAD2L1","type":"exact"}],"termid":"PR:O14417"}


id: PBO:0086092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase that regulates the mating response; negatively regulates the MAP kinase signaling cascade during mating; member of the serine/threonine phosphatase PP1 family","termid":"PBO:0086092"}


id: GO:0006410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular synthesis of DNA on a template of RNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription, RNA-dependent (obsolete GO:0006410)","synonyms":[{"name":"transcription, RNA-dependent","type":"exact"}],"termid":"GO:0006410"}


id: MOD:01859
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form 4-amino-3-isothiazolidinone-L-phenylalanine.","definition_xrefs":["PubMed:17502599","RESID:AA0562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-phenylalanine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-phenylpropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-phenylpropanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-phenylalanine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)phenylalanine (Cys-Phe)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-phenylalanine","type":"exact"},{"name":"cysteinyl phenylalanine sulfenamide","type":"exact"},{"name":"phenylalanine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"phenylalanine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:01859"}


id: MONDO:0014360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the NECAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0004736","MONDO:0700092","MONDO:0005066"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 21","secondary_identifiers":["MEDGEN:862867","DOID:0080443","GARD:16017","UMLS:C4014430","OMIM:615833"],"synonyms":[{"name":"DEE21","type":"exact"},{"name":"EIEE21","type":"exact"},{"name":"NECAP1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 21","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in NECAP1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 21","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 21","type":"exact"}],"termid":"MONDO:0014360","xrefs":{"Monarch":{"xref_id":"0014360"}}}


id: PBO:0043823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like phosphoesterase domain containing 1","termid":"PBO:0043823"}


id: PBO:0026889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-translation_regulation_phenotype_during_vegetative_growth","termid":"PBO:0026889"}


id: PBO:0046567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 9","termid":"PBO:0046567"}


id: PBO:0046933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member A","termid":"PBO:0046933"}


id: PR:O42651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.11c","synonyms":[{"name":"Spom972h-atg17","type":"exact"}],"termid":"PR:O42651"}


id: PBO:0109055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein Ank1","termid":"PBO:0109055"}


id: GO:0019164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + 2 oxidized ferredoxin = acetyl-CoA + CO2 + 2 reduced ferredoxin + 2 H+.","definition_xrefs":["KEGG_REACTION:R01196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate synthase activity","secondary_identifiers":["GO:0018696","RHEA:12765","EC:1.2.7.1","MetaCyc:PYRUFLAVREDUCT-RXN"],"synonyms":[{"name":"PFOR","type":"exact"},{"name":"pyruvate oxidoreductase activity","type":"related"},{"name":"pyruvate synthetase activity","type":"related"},{"name":"pyruvate-ferredoxin reductase activity","type":"exact"},{"name":"pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)","type":"related"},{"name":"pyruvate:ferredoxin oxidoreductase activity","type":"related"},{"name":"pyruvic-ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0019164"}


id: FYECO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any set of experimental conditions that places all cells in a culture into the same growth stage (e.g. cell cycle phase).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous culture","termid":"FYECO:0000346"}


id: MONDO:0100599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in which the cause of the disease is a variant in the COL1A1 gene. This includes classic and arthrochalasia types as well as combined osteogenesis imperfecta and Ehlers-Danlos syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599","xrefs":{"Monarch":{"xref_id":"0100599"}}}


id: GO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of elastin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastase activity (obsolete GO:0042708)","synonyms":[{"name":"elastase activity","type":"exact"}],"termid":"GO:0042708"}


id: MONDO:0009437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bamforth-Lazarus syndrome is a very rare syndrome of congenital hypothyroidism characterized by thyroid dysgenesis (in most cases athyreosis), cleft palate and spiky hair, with or without choanal atresia, and bifid epiglottis. Facial dysmorphism and porencephaly have been reported in isolated cases.","definition_xrefs":["Orphanet:1226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bamforth-Lazarus syndrome","secondary_identifiers":["GARD:414","UMLS:C1855794","SCTID:722375007","MEDGEN:343420","OMIM:241850","icd11.foundation:1747690671","MESH:C537901","DOID:0050655"],"synonyms":[{"name":"Athyroidal hypothyroidism-spiky hair-cleft palate syndrome","type":"exact"},{"name":"Bamforth syndrome","type":"exact"},{"name":"Bamforth-Lazarus syndrome","type":"exact"},{"name":"hypothyroidism cleft palate hypothyroidism, athyroidal, with spiky hair and cleft palate","type":"related"},{"name":"hypothyroidism, ATHYROIDAL, with spiky hair and cleft palate","type":"exact"},{"name":"hypothyroidism, thyroidal or ATHYROIDAL, with spiky hair and cleft palate","type":"related"},{"name":"hypothyroidism-cleft palate syndrome","type":"exact"}],"termid":"MONDO:0009437","xrefs":{"Monarch":{"xref_id":"0009437"}}}


id: PBO:0087768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs","termid":"PBO:0087768"}


id: PBO:0073877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 5","termid":"PBO:0073877"}


id: PATO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having three or more primary branches diverging radially from a single point.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinodromous","termid":"PATO:0001967"}


id: PBO:0027840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase_during_nitrogen_limitation","termid":"PBO:0027840"}


id: GO:1905038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane lipid metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25954280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"membrane lipid metabolic process","termid":"GO:0006643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane lipid metabolic process","synonyms":[{"name":"regulation of membrane lipid metabolism","type":"exact"}],"termid":"GO:1905038"}


id: PBO:0078372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 16-1","termid":"PBO:0078372"}


id: GO:1902963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of metalloendopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:sjp","PMID:18362153"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902963)","synonyms":[{"name":"down regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"inhibition of metalloendopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"negative regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902963"}


id: GO:0009619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to pathogenic bacteria (obsolete GO:0009619)","synonyms":[{"name":"resistance to pathogenic bacteria","type":"exact"}],"termid":"GO:0009619"}


id: PR:Q09852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter C23D3.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.12","synonyms":[{"name":"Spom972h-SPAC23D3.12","type":"exact"}],"termid":"PR:Q09852"}


id: PBO:0028180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cysteine_synthase_activity","termid":"PBO:0028180"}


id: PBO:0067919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 221","termid":"PBO:0067919"}


id: GO:0018683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-camphor + putidaredoxin + O2 = (+)-exo-5-hydroxycamphor + oxidized putidaredoxin + H2O.","definition_xrefs":["EC:1.14.15.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"camphor 5-monooxygenase activity","secondary_identifiers":["MetaCyc:R541-RXN","RHEA:13525","UM-BBD_enzymeID:r0426"],"synonyms":[{"name":"(+)-camphor,reduced putidaredoxin:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"2-bornanone 5-exo-hydroxylase activity","type":"related"},{"name":"D-camphor-exo-hydroxylase activity","type":"related"},{"name":"bornanone 5-exo-hydroxylase activity","type":"related"},{"name":"camphor 5-exo-hydroxylase activity","type":"related"},{"name":"camphor 5-exo-methylene hydroxylase activity","type":"exact"},{"name":"camphor 5-exohydroxylase activity","type":"related"},{"name":"camphor hydroxylase activity","type":"related"},{"name":"camphor methylene hydroxylase activity","type":"related"},{"name":"cytochrome p450-cam activity","type":"related"},{"name":"d-camphor monooxygenase activity","type":"related"},{"name":"methylene hydroxylase activity","type":"related"},{"name":"methylene monooxygenase activity","type":"related"}],"termid":"GO:0018683"}


id: PBO:0011062
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approver_email","termid":"PBO:0011062"}


id: FYPO:0006302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which changes in contacts within a chromosome arm that normally take place during mitosis do not occur.","definition_xrefs":["PomBase:mah","PMID:28825727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished intra-arm chromosome contact change during mitosis","synonyms":[{"name":"abolished changes in intra-arm contacts in mitosis","type":"exact"},{"name":"abolished intra-arm chromosome contact change during M phase of mitotic cell cycle","type":"related"},{"name":"abolished intra-arm chromosome contact change during mitosis during vegetative growth","type":"exact"},{"name":"intra-arm chromosome contact change abolished during mitosis","type":"exact"}],"termid":"FYPO:0006302"}


id: PBO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like","termid":"PBO:0048671"}


id: PBO:0058717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6845","termid":"PBO:0058717"}


id: PBO:0053725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 939","termid":"PBO:0053725"}


id: GO:2000919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucuronoxylan catabolic process","termid":"GO:2000916"},{"relation_name":"is_a","term_name":"regulation of glucuronoarabinoxylan catabolic process","termid":"GO:2000918"},{"relation_name":"is_a","term_name":"negative regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000922"},{"relation_name":"negatively_regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"negative regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000919"}


id: MONDO:0018965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare renal disease characterized by glomerular nephropathy with hematuria progressing to end-stage renal disease (ESRD), frequently associated with sensorineural deafness, and occasionally with ocular anomalies.","definition_xrefs":["Orphanet:63"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Alport syndrome","secondary_identifiers":["OMIMPS:301050","MedDRA:10001843","UMLS:C1567741","MESH:D009394","ICD10CM:Q87.81","NANDO:1200712","NCIT:C34842","MEDGEN:339209","NANDO:2200126","icd11.foundation:1170919425","NORD:756","DOID:10983","GARD:5785"],"synonyms":[{"name":"Alport deafness-nephropathy","type":"exact"},{"name":"Alport syndrome","type":"exact"},{"name":"Alport's syndrome","type":"exact"},{"name":"hereditary nephritis","type":"broad"}],"termid":"MONDO:0018965","xrefs":{"Monarch":{"xref_id":"0018965"}}}


id: PBO:0051061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3/OR15-3A (non-functional)","termid":"PBO:0051061"}


id: GO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-R3 methylation (obsolete GO:0043985)","synonyms":[{"name":"histone H4 R3 methylation","type":"exact"},{"name":"histone H4 methylation at R3","type":"exact"},{"name":"histone H4R3me","type":"exact"}],"termid":"GO:0043985"}


id: GO:0006212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"uracil metabolic process","termid":"GO:0019860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uracil catabolic process","synonyms":[{"name":"uracil breakdown","type":"exact"},{"name":"uracil catabolism","type":"exact"},{"name":"uracil degradation","type":"exact"}],"termid":"GO:0006212"}


id: PBO:0067366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 466, pseudogene","termid":"PBO:0067366"}


id: GO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ligase activity (obsolete GO:0051340)","synonyms":[{"name":"ligase regulator","type":"exact"}],"termid":"GO:0051340"}


id: PBO:0044484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP26C1 divergent transcript","termid":"PBO:0044484"}


id: GO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"intermediate mesoderm formation","termid":"GO:0048391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell differentiation","synonyms":[{"name":"intermediate mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048392"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: PBO:0083727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 18S rRNA dimethylase (dimethyladenosine transferase); responsible for conserved m6(2)Am6(2)A dimethylation in 3'-terminal loop of 18S rRNA, part of 90S and 40S pre-particles in nucleolus, involved in pre-ribosomal RNA processing; human homolog DIMT1 complements yeast dim1 mutant","termid":"PBO:0083727"}


id: PBO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0013754"}


id: MONDO:1012911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuromuscular disease characterized by a potassium channelopathy that occurs in cattle due to a mutation in the KCNG1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromuscular channelopathy, KCNG1-related, cattle","secondary_identifiers":["OMIA:002483-9913"],"termid":"MONDO:1012911","xrefs":{"Monarch":{"xref_id":"1012911"}}}


id: PBO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0002829"}


id: GO:0009634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal sensitivity/resistance (obsolete GO:0009634)","synonyms":[{"name":"heavy metal sensitivity/resistance","type":"exact"}],"termid":"GO:0009634"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: PBO:0042998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin A","termid":"PBO:0042998"}


id: PBO:0057208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376b","termid":"PBO:0057208"}


id: MONDO:0022397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in the retinitis pigmentosa-1 gene (obsolete MONDO:0022397)","secondary_identifiers":["Orphanet:156168"],"termid":"MONDO:0022397","xrefs":{"Monarch":{"xref_id":"0022397"}}}


id: PR:Q9UTB2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dia4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.06c","synonyms":[{"name":"SerRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dia4","type":"exact"},{"name":"seryl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"seryl-tRNA(Ser/Sec) synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTB2"}


id: PBO:0059776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 2","termid":"PBO:0059776"}


id: PBO:0075968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 8","termid":"PBO:0075968"}


id: PBO:0048166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FZD10 antisense divergent transcript","termid":"PBO:0048166"}


id: PBO:0064506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit G","termid":"PBO:0064506"}


id: GO:0018937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitroglycerin, a well-known nitrate ester and an important component of dynamite and other propellants. Toxic to algae, invertebrate, and vertebrates.","definition_xrefs":["UM-BBD_pathwayID:ng"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroglycerin metabolic process","secondary_identifiers":["MetaCyc:P201-PWY"],"synonyms":[{"name":"NG metabolic process","type":"exact"},{"name":"NG metabolism","type":"exact"},{"name":"nitroglycerin metabolism","type":"exact"}],"termid":"GO:0018937"}


id: MONDO:0010227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RPGR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"RPGR-related retinopathy","termid":"MONDO:0100437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 3","secondary_identifiers":["ICD10CM:H35.5","MESH:C564520","UMLS:C1845667","MEDGEN:336999","DOID:0110414","OMIM:300029","GARD:10381"],"synonyms":[{"name":"Choroidoretinal Degeneration with retinal reflex in heterozygous Women","type":"related"},{"name":"RP3","type":"exact"},{"name":"RPGR retinitis pigmentosa","type":"exact"},{"name":"cone-rod Degeneration, X-linked","type":"related"},{"name":"retinitis pigmentosa 15","type":"related"},{"name":"retinitis pigmentosa 3","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RPGR","type":"exact"},{"name":"retinitis pigmentosa type 3","type":"exact"}],"termid":"MONDO:0010227","xrefs":{"Monarch":{"xref_id":"0010227"}}}


id: GO:0004365
data:
  {"annotated_genes":["SJAG_03903","SJAG_02945","SJAG_03828","SJAG_02135","SJAG_00027","SJAG_06622","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72883,75086,80784,109777,109778,109780,109783],"is_not":false,"summary":null,"term":"GO:0004365"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+.","definition_xrefs":["EC:1.2.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity","termid":"GO:0043891"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70482","Reactome:R-HSA-70449","RHEA:10300","MetaCyc:GAPOXNPHOSPHN-RXN"],"synonyms":[{"name":"3-phosphoglyceraldehyde dehydrogenase activity","type":"related"},{"name":"D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)","type":"related"},{"name":"GAPDH activity","type":"related"},{"name":"NAD-dependent glyceraldehyde phosphate dehydrogenase activity","type":"related"},{"name":"NAD-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"NADH-glyceraldehyde phosphate dehydrogenase activity","type":"related"},{"name":"dehydrogenase, glyceraldehyde phosphate","type":"related"},{"name":"glyceraldehyde phosphate dehydrogenase (NAD)","type":"related"},{"name":"glyceraldehyde-3-P-dehydrogenase activity","type":"related"},{"name":"phosphoglyceraldehyde dehydrogenase activity","type":"related"},{"name":"triosephosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0004365","terms_by_termid":{"GO:0004365":null}}


id: FYPO:0000032
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119739],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[119701],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[119693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119949,119575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119726],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119694,119945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119740],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[119691,119690],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytokinesis is abnormal. Cytokinesis is part of the cell cycle and results in the division of the cytoplasm of a cell and its separation into two daughter cells.","definition_xrefs":["PomBase:mah","GO:0000281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_03596","SJAG_01143","SJAG_04280","SJAG_04522","SJAG_02392"],"name":"abnormal cytokinesis","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_02592","SJAG_03596","SJAG_04522","SJAG_00118"],"single_locus_genotype_uniquenames":["sty1delta","rga4delta","mid1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","pom1delta"],"synonyms":[{"name":"abnormal cell cycle cytokinesis","type":"exact"},{"name":"abnormal cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinesis","type":"exact"},{"name":"cytokinesis defects","type":"exact"},{"name":"cytokinesis: abnormal","type":"related"}],"termid":"FYPO:0000032","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamine + H2O = protein L-glutamate + NH3.","definition_xrefs":["EC:3.5.1.44","MetaCyc:CHEBDEAMID-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0140096","GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"protein-glutamine glutaminase activity","secondary_identifiers":["RHEA:16441"],"synonyms":[{"name":"destabilase activity","type":"related"},{"name":"glutaminyl-peptide glutaminase activity","type":"related"},{"name":"glutaminylpeptide glutaminase activity","type":"related"},{"name":"peptidoglutaminase II activity","type":"related"},{"name":"peptidylglutaminase II","type":"related"},{"name":"protein-L-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050568"}


id: PBO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 2","termid":"PBO:0060503"}


id: PBO:0017550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1","termid":"PBO:0017550"}


id: PBO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk34","termid":"PBO:0005797"}


id: PR:O13704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C13F5.05, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.05","synonyms":[{"name":"Spom972h-mpd1","type":"exact"}],"termid":"PR:O13704"}


id: MONDO:0100156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by onset of megaloblastic anemia associated with decreased serum vitamin B12 (cobalamin, Cbl) in infancy or early childhood. Low molecular weight (LMW) proteinuria is frequently present, but sometimes occurs later and is usually mild or subclinical. Patients often present with vague symptoms, including failure to thrive, loss of appetite, fatigue, lethargy, and/or recurrent infections. Some patients may present later in childhood with neurologic abnormalities related to B12 deficiency, such as sensorimotor neuropathy and/or cognitive disturbances.","definition_xrefs":["OMIM:261100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Imerslund-Grasbeck syndrome","termid":"MONDO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"Imerslund-Grasbeck syndrome type 1","secondary_identifiers":["NCIT:C131677","MEDGEN:865256","UMLS:C4016819"],"synonyms":[{"name":"Imerslund-Grasbeck syndrome 1","type":"exact"},{"name":"Imerslund-Grasbeck syndrome type 1","type":"exact"},{"name":"MGA-1","type":"exact"},{"name":"MGA1","type":"exact"},{"name":"Mga1","type":"exact"},{"name":"enterocyte cobalamin malabsorption","type":"exact"},{"name":"enterocyte intrinsic factor receptor, defect of","type":"exact"},{"name":"megaloblastic Anaemia type 1","type":"exact"},{"name":"megaloblastic Anemia type 1","type":"exact"},{"name":"megaloblastic anemia, 1","type":"exact"},{"name":"megaloblastic anemia, Finnish type","type":"exact"},{"name":"pernicious anemia, juvenile, due to selective intestinal malabsorption of vitamin b12, with proteinuria","type":"exact"}],"termid":"MONDO:0100156","xrefs":{"Monarch":{"xref_id":"0100156"}}}


id: PBO:0017719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6, Gim1 (predicted)","termid":"PBO:0017719"}


id: GO:0018935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilotriacetate metabolic process","termid":"GO:0018934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aerobic nitrilotriacetate metabolic process","synonyms":[{"name":"aerobic nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018935"}


id: GO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"negatively_regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection regeneration","synonyms":[{"name":"growth cone collapse","type":"related"}],"termid":"GO:0070571"}


id: PBO:0082616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil protein involved in spindle-assembly checkpoint; required for inhibition of karyopherin/importin Pse1p (aka Kap121p) upon spindle assembly checkpoint arrest; phosphorylated by Mps1p upon checkpoint activation which leads to inhibition of anaphase promoting complex activity; forms a complex with Mad2p; gene dosage imbalance between MAD1 and MAD2 leads to chromosome instability","termid":"PBO:0082616"}


id: MONDO:0800494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epilepsy syndrome characterized by a combined generalized and focal epilepsy syndromes where age at seizure onset varies.","direct_ancestors":[{"relation_name":"is_a","term_name":"combined generalized and focal epilepsy","termid":"MONDO:0100573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"variable-age onset combined generalized and focal epilepsy syndrome","termid":"MONDO:0800494","xrefs":{"Monarch":{"xref_id":"0800494"}}}


id: PBO:0080254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 17 pseudogene","termid":"PBO:0080254"}


id: PBO:0087279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shmoo tip protein, substrate of Hub1p ubiquitin-like protein; mutants are defective for mating projection formation, thereby implicating Hbt1p in polarized cell morphogenesis; HBT1 has a paralog, YNL195C, that arose from the whole genome duplication","termid":"PBO:0087279"}


id: MONDO:0007596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete factor VIII deficiency (obsolete MONDO:0007596)","termid":"MONDO:0007596","xrefs":{"Monarch":{"xref_id":"0007596"}}}


id: PBO:0083982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine-dependent NAD(+) synthetase; essential for the formation of NAD(+) from nicotinic acid adenine dinucleotide","termid":"PBO:0083982"}


id: PBO:0029746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_calcium_export","termid":"PBO:0029746"}


id: MONDO:0012021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 17, autosomal dominant","secondary_identifiers":["OMIM:608367","MEDGEN:854818","UMLS:C3888211"],"synonyms":[{"name":"MYP17","type":"exact"},{"name":"myopia 17, autosomal dominant","type":"exact"},{"name":"myopia 4","type":"related"},{"name":"myopia 4, formerly","type":"related"}],"termid":"MONDO:0012021","xrefs":{"Monarch":{"xref_id":"0012021"}}}


id: _global:assayed_region
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and the region of the genome in which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_region","termid":"_global:assayed_region"}


id: PATO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having distinct structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structured","termid":"PATO:0001411"}


id: PBO:0075757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 domain containing","termid":"PBO:0075757"}


id: MONDO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign slow growing adipose tumor, characterized by the presence of polygonal brown fat cells with abundant cytoplasm, that arises within the nervous system.","definition_xrefs":["NCIT:C6997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system lipoma","termid":"MONDO:0003844"},{"relation_name":"is_a","term_name":"hibernoma","termid":"MONDO:0021168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system hibernoma","secondary_identifiers":["MEDGEN:317749","UMLS:C1708362","DOID:6607"],"synonyms":[{"name":"central nervous system hibernoma","type":"exact"},{"name":"hibernoma of central nervous system","type":"exact"},{"name":"hibernoma of nervous system","type":"exact"},{"name":"hibernoma of the central nervous system","type":"exact"},{"name":"nervous system hibernoma","type":"related"}],"termid":"MONDO:0003943","xrefs":{"Monarch":{"xref_id":"0003943"}}}


id: PBO:0091383
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ILV3","termid":"PBO:0091383"}


id: PBO:0046292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 2","termid":"PBO:0046292"}


id: PR:O94636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA guanosine-2'-O-methyltransferase TRM11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13370:SF0","PRO:DNx","OMA:SCHPO03774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(10)-N2)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.02","secondary_identifiers":["UniProtKB:O94636"],"synonyms":[{"name":"Spom972h-TRMT11","type":"exact"},{"name":"tRNA guanosine-2'-O-methyltransferase TRM11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methylase 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94636"}


id: PR:P87122
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A12.06c gene.","definition_xrefs":["UniProtKB:P87122","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation exchanger C3A12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.06c","synonyms":[{"name":"Spom972h-SPAC3A12.06c","type":"exact"}],"termid":"PR:P87122"}


id: PBO:0082406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of translation initiation factor eIF2B; the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as negative regulator of GCN4 expression; mutations in human ortholog EIF2B2 cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); human ortholog can complement yeast mutant, allows growth down-regulation of yeast gene","termid":"PBO:0082406"}


id: PBO:0049638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 41","termid":"PBO:0049638"}


id: PBO:0069515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 784, pseudogene","termid":"PBO:0069515"}


id: GO:0030318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a melanocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte differentiation","synonyms":[{"name":"melanocyte cell differentiation","type":"exact"},{"name":"melanophore differentiation","type":"exact"}],"termid":"GO:0030318"}


id: MONDO:0017540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postaxial polydactyly of toes, bilateral (obsolete MONDO:0017540)","secondary_identifiers":["Orphanet:295181"],"termid":"MONDO:0017540","xrefs":{"Monarch":{"xref_id":"0017540"}}}


id: GO:0007594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of the puparia of Diptera to their substrate; normally effected by a 'glue' secreted by the larval salivary gland and expectorated at the time of pupariation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism adhesion to substrate","termid":"GO:0022609"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"puparial adhesion","synonyms":[{"name":"puparial glue","type":"related"}],"termid":"GO:0007594"}


id: PBO:0084428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major stress-induced structural GPI-cell wall glycoprotein; associates with translating ribosomes, possible role in mitochondrial genome maintenance; ORF contains two distinct variable minisatellites; SED1 has a paralog, SPI1, that arose from the whole genome duplication","termid":"PBO:0084428"}


id: PBO:0091104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-B","termid":"PBO:0091104"}


id: PBO:0039083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agrin","termid":"PBO:0039083"}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: PBO:0040555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8","termid":"PBO:0040555"}


id: GO:1903266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:bhm","PMID:12679340","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ornithine metabolic process","termid":"GO:0090368"},{"relation_name":"regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of ornithine catabolic process","synonyms":[{"name":"regulation of ornithine breakdown","type":"exact"},{"name":"regulation of ornithine catabolism","type":"exact"},{"name":"regulation of ornithine degradation","type":"exact"}],"termid":"GO:1903266"}


id: PBO:0064894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''gamma","termid":"PBO:0064894"}


id: GO:0106430
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57251],"is_not":false,"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"(S)-dihydroorotate + a quinone = orotate + a quinol.","definition_xrefs":["RHEA:30187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:1.3.5.2"],"termid":"GO:0106430","terms_by_termid":{"GO:0106430":null}}


id: PBO:0076837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 4","termid":"PBO:0076837"}


id: PR:Q9HGL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- whi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle transcriptional repressor whi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.02","synonyms":[{"name":"Spom972h-whi5","type":"exact"},{"name":"meiotically up-regulated gene 54 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGL9"}


id: GO:0070581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA-dependent DNA replication process in which a single-stranded DNA molecule is synthesized from a circular duplex template. Replication typically does not cease when one circumference has been replicated, but continues around the circumference several more times, producing a long single strand comprising multimers of the replicon.","definition_xrefs":["ISBN:0198506732","GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"rolling circle DNA replication","synonyms":[{"name":"rolling circle replication","type":"exact"}],"termid":"GO:0070581"}


id: PBO:0054842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2256","termid":"PBO:0054842"}


id: FYPO:0000902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule depolymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule catastrophe during vegetative growth","type":"related"},{"name":"abnormal microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule shrinkage during vegetative growth","type":"related"}],"termid":"FYPO:0000902"}


id: GO:0102688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + dihydrozeatin = H+ + 9-(alpha-D-glucosyl)dihydrozeatin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrozeatin UDP glycosyltransferase activity (obsolete GO:0102688)","termid":"GO:0102688"}


id: PBO:0059912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 35","termid":"PBO:0059912"}


id: MONDO:0032877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","secondary_identifiers":["UMLS:C5231470","MEDGEN:1684757","OMIM:618709"],"synonyms":[{"name":"NEDBAS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH NONSPECIFIC BRAIN ABNORMALITIES AND WITH OR WITHOUT SEIZURES","type":"related"},{"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","type":"exact"}],"termid":"MONDO:0032877","xrefs":{"Monarch":{"xref_id":"0032877"}}}


id: MONDO:0016525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism (FH) is the heritable form of primary aldosteronism (PA) which comprises three identified subtypes to date: FH type I (FH-I) characterized by early-onset hypertension, glucocorticoid remediable adrenocorticotropic hormone (ACTH)-dependent hyperaldosteronism, variable hypokalemia, and overproduction of 18-oxocortisol and 18-hydroxycortisol; FH type II (FH-II) characterized by hypertension of varying severity and hyperaldosteronism not suppressible by dexamethasone; and FH type III (FH-III) characterized by profound hypokalemia, early-onset severe hypertension, non glucocorticoid-remediable hyperaldosteronism, and overproduction of 18-oxocortisol and 18-hydroxycortisol.","definition_xrefs":["Orphanet:235936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary aldosteronism","termid":"MONDO:0001422"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hyperaldosteronism","secondary_identifiers":["SCTID:703231005","MESH:C580087","OMIMPS:103900","GARD:20630","ICD10CM:E26.0","icd11.foundation:1586992015","NCIT:C127160","UMLS:C3713420","NANDO:2200602","MEDGEN:780028","Orphanet:371861"],"synonyms":[{"name":"FH","type":"exact"},{"name":"genetic hyperaldosteronism","type":"exact"},{"name":"hereditary hyperaldosteronism","type":"exact"}],"termid":"MONDO:0016525","xrefs":{"Monarch":{"xref_id":"0016525"}}}


id: PBO:0052014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 4","termid":"PBO:0052014"}


id: PBO:0086760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; regulated by the metal-responsive Aft1p transcription factor; highly inducible in zinc-depleted conditions; localizes to the soluble fraction; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YOR387C has a paralog, VEL1, that arose from a single-locus duplication","termid":"PBO:0086760"}


id: PBO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.6.1","termid":"PBO:0001622"}


id: PBO:0048838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3 like pseudogene 1","termid":"PBO:0048838"}


id: GO:0019990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine catabolic process","synonyms":[{"name":"pteridine breakdown","type":"exact"},{"name":"pteridine catabolism","type":"exact"},{"name":"pteridine degradation","type":"exact"}],"termid":"GO:0019990"}


id: FYPO:0007739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar ring disassembly begins later than normal. Nucleolar rings are structures located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress. They normally disassemble upon removal of heat stress.","definition_xrefs":["PMID:33176152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of nucleolar ring disassembly","synonyms":[{"name":"delayed nucleolar ring disassembly","type":"exact"},{"name":"delayed nucleolar ring disassembly during recovery from heat shock","type":"exact"},{"name":"delayed onset of NuR disassembly","type":"exact"},{"name":"delayed onset of nucleolar ring disassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of nucleolar ring disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007739"}


id: SO:1000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution of a pyrimidine, C or T, for another pyrimidine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition","termid":"SO:1000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_transition","synonyms":[{"name":"pyrimidine transition","type":"exact"}],"termid":"SO:1000010"}


id: PBO:0057498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 616","termid":"PBO:0057498"}


id: GO:1903875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticosterone.","definition_xrefs":["PMID:10802282","GO_REF:0000067","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"corticosterone binding","termid":"GO:1903875"}


id: GO:0097146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of NOXA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NOXA-BCL-xl complex","termid":"GO:0097146"}


id: MONDO:0015321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pierre Robin syndrome associated with branchial archs anomalies (obsolete MONDO:0015321)","termid":"MONDO:0015321","xrefs":{"Monarch":{"xref_id":"0015321"}}}


id: PATO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality that is relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pigmented","termid":"PATO:0002248"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pigmentation","synonyms":[{"name":"hyperpigmented","type":"exact"}],"termid":"PATO:0002250"}


id: PBO:0046336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 1","termid":"PBO:0046336"}


id: PBO:0077128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulointerstitial nephritis antigen like 1","termid":"PBO:0077128"}


id: GO:0030604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + NADP+ = 1-deoxy-D-xylulose 5-phosphate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.267","RHEA:13717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1-deoxy-D-xylulose-5-phosphate reductoisomerase activity","secondary_identifiers":["KEGG_REACTION:R05688","MetaCyc:DXPREDISOM-RXN"],"synonyms":[{"name":"1-deoxy-D-xylulose-5-phosphate isomeroreductase activity","type":"related"},{"name":"1-deoxyxylulose-5-phosphate reductoisomerase activity","type":"related"},{"name":"2-C-methyl-D-erythritol-4-phosphate:NADP+ oxidoreductase (isomerizing)","type":"related"},{"name":"2C-methyl-D-erythritol-4-phosphate (MEP) synthase activity","type":"related"},{"name":"DOXP reductoisomerase activity","type":"exact"},{"name":"DXP-reductoisomerase activity","type":"related"}],"termid":"GO:0030604"}


id: MOD:00282
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-selenyl-L-cysteine.","definition_xrefs":["PubMed:12716131","PubMed:10430865","PubMed:14594807","PubMed:10966817","PubMed:11827487","RESID:AA0277","Unimod:423#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"},{"relation_name":"is_a","term_name":"residues isobaric at 182.9-183.0 Da","termid":"MOD:00778"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-selenyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(selanylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroselenosulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-hydroselenylsulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-hydroselenylthiopropanoic acid","type":"exact"},{"name":"ACT_SITE S-selanylcysteine intermediate","type":"exact"},{"name":"Delta:Se(1)","type":"related"},{"name":"MOD_RES S-selenylcysteine","type":"exact"},{"name":"S-selanyl-L-cysteine","type":"exact"},{"name":"S-selanylcysteine","type":"exact"},{"name":"S-selenylcysteine","type":"exact"},{"name":"cysteine perselenide","type":"related"},{"name":"selenyl","type":"related"}],"termid":"MOD:00282"}


id: PBO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor homolog (predicted)","termid":"PBO:0004085"}


id: PBO:0051640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP U3 small nucleolar ribonucleoprotein 4","termid":"PBO:0051640"}


id: GO:0021915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube development","termid":"GO:0021915"}


id: PBO:0040524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antizyme inhibitor 1","termid":"PBO:0040524"}


id: MONDO:0017379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy-intellectual disability-acromicria-premature menopause syndrome is a rare genetic syndromic intellectual disability characterized by intellectual disability, polyneuropathy, short stature and short limbs, brachydactyly, and premature ovarian insufficiency. Only one familial case with three affected females was described and there have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:2928"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy-intellectual disability-acromicria-premature menopause syndrome","secondary_identifiers":["UMLS:C4749397","GARD:4424","MEDGEN:1665486"],"synonyms":[{"name":"Lundberg syndrome","type":"exact"},{"name":"polyneuropathy - intellectual deficit - acromicria - premature menopause","type":"related"},{"name":"polyneuropathy intellectual disability acromicria premature menopause","type":"related"},{"name":"polyneuropathy mental retardation acromicria premature menopause","type":"related"}],"termid":"MONDO:0017379","xrefs":{"Monarch":{"xref_id":"0017379"}}}


id: PBO:0059483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase A","termid":"PBO:0059483"}


id: FYECO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amino acids were transiently removed from medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ limited nitrogen","termid":"FYECO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient amino acid starvation < 1 hour","termid":"FYECO:0000401"}


id: PBO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P","termid":"PBO:0090379"}


id: GO:0098663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transmembrane transporter activity that is involved in importing some substance into a cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane transporter activity involved in import into cell (obsolete GO:0098663)","termid":"GO:0098663"}


id: PBO:0073543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 1","termid":"PBO:0073543"}


id: GO:2001186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"}


id: GO:0061671
data:
  {"annotated_genes":["SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60685],"is_not":false,"summary":null,"term":"GO:0061671"}]},"cv_name":"cellular_component","definition":"A protein complex located at the mitochondrial ribosome tunnel exit that is involved in efficient translation and protein complex assembly.","definition_xrefs":["GOC:dph","PMID:21670217","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cbp3p-Cbp6 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0061671","terms_by_termid":{"GO:0061671":null}}


id: PBO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 3","termid":"PBO:0052585"}


id: GO:0001161
data:
  {"annotated_genes":["SJAG_03519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to an intronic DNA sequence that regulates the transcription of the transcript it is contained within.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0000976","GO:0003674"],"is_obsolete":false,"name":"intronic transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044213"],"synonyms":[{"name":"intronic transcription regulatory region DNA binding","type":"related"}],"termid":"GO:0001161","terms_by_termid":{"GO:0001162":null}}


id: GO:0046775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that results in the inhibition of host cell cytokine production.","definition_xrefs":["PMID:10859382"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cytokine production (obsolete GO:0046775)","synonyms":[{"name":"negative regulation by virus of host cytokine production","type":"exact"}],"termid":"GO:0046775"}


id: PBO:0080333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 97 pseudogene","termid":"PBO:0080333"}


id: MONDO:0013921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian susceptibility or predisposition to herpes simplex infection induced encephalitis in which the cause of the diseas is a mutation in the TICAM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 4","secondary_identifiers":["UMLS:C3553869","OMIM:614850","MEDGEN:766783"],"synonyms":[{"name":"Herpes simplex encephalitis, susceptibility to, type 4","type":"exact"},{"name":"IIAE6","type":"related"},{"name":"TICAM1 herpes simplex encephalitis","type":"exact"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 6","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 6","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 6","type":"related"},{"name":"herpes simplex encephalitis caused by mutation in TICAM1","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0013921","xrefs":{"Monarch":{"xref_id":"0013921"}}}


id: PATO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000340 relative compatability value (obsolete PATO:0000340)","termid":"PATO:0000340"}


id: PBO:0087740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential","termid":"PBO:0087740"}


id: PBO:0072623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B","termid":"PBO:0072623"}


id: PBO:0116614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3140","termid":"PBO:0116614"}


id: PBO:0055408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2838","termid":"PBO:0055408"}


id: GO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell antigen processing and presentation","synonyms":[{"name":"regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"regulation of B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002622"}


id: PBO:0065072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 1","termid":"PBO:0065072"}


id: GO:0051165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine metabolic process","synonyms":[{"name":"2,5-dihydroxypyridine metabolism","type":"exact"},{"name":"pyridine-2,5-diol metabolic process","type":"exact"}],"termid":"GO:0051165"}


id: GO:1902418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which (+)-abscisic acid D-glucopyranosyl este is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:24028845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"(+)-abscisic acid D-glucopyranosyl ester transmembrane transport","synonyms":[{"name":"ABA-GE transmembrane transport","type":"exact"},{"name":"abscisic acid glucosyl ester transmembrane transport","type":"exact"}],"termid":"GO:1902418"}


id: GO:0042438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin metabolic process","termid":"GO:0006582"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"melanin biosynthetic process","secondary_identifiers":["Reactome:R-HSA-5662702"],"synonyms":[{"name":"melanin anabolism","type":"exact"},{"name":"melanin biosynthesis","type":"exact"},{"name":"melanin formation","type":"exact"},{"name":"melanin synthesis","type":"exact"}],"termid":"GO:0042438"}


id: PBO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin domain containing 1","termid":"PBO:0044224"}


id: GO:0031530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for gonadotropin-releasing hormone (GnRH), a peptide hormone that is synthesized and released by the hypothalamus and is responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary.","definition_xrefs":["PMID:15196882","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor binding","synonyms":[{"name":"GnRH receptor binding","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor binding","type":"exact"}],"termid":"GO:0031530"}


id: PBO:0064654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 4","termid":"PBO:0064654"}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: PBO:0089212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sec1","termid":"PBO:0089212"}


id: PBO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8","termid":"PBO:0002437"}


id: GO:0052596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenethylamine:oxygen oxidoreductase (deaminating) activity (obsolete GO:0052596)","termid":"GO:0052596"}


id: MONDO:0013624
data:
  {"annotated_genes":["SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86166],"is_not":false,"summary":null,"term":"MONDO:0013624"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the MAN1B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"Rafiq syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481757","OMIM:614202","DOID:0081097","UMLS:C3280127","GARD:22550"],"synonyms":[{"name":"CDG2U","type":"exact"},{"name":"MAN1B1 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT15","type":"related"},{"name":"RAFQS","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in MAN1B1","type":"exact"},{"name":"intellectual disability, autosomal recessive 15","type":"exact"},{"name":"mental retardation, autosomal recessive 15","type":"exact"},{"name":"mental retardation, autosomal recessive type 15","type":"exact"}],"termid":"MONDO:0013624","terms_by_termid":{"MONDO:0013624":null},"xrefs":{"Monarch":{"xref_id":"0013624"}}}


id: GO:0015625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ferric-hydroxamate(out) = ADP + phosphate + ferric-hydroxamate(in).","definition_xrefs":["PMID:1551849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type ferric hydroxamate transporter activity","secondary_identifiers":["GO:0102026","GO:0015623","GO:0015409","GO:0015622","EC:7.2.2.16","MetaCyc:ABC-11-RXN"],"synonyms":[{"name":"ATP-dependent ferric-hydroxamate transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent iron-chelate transporter activity","type":"broad"},{"name":"ATPase-coupled ferric-hydroxamate transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled iron-chelate transporter activity","type":"broad"},{"name":"ferric-hydroxamate ABC transporter","type":"narrow"},{"name":"ferric-hydroxamate porter activity","type":"broad"},{"name":"ferric-hydroxamate transmembrane transporter activity","type":"broad"},{"name":"ferric-hydroxamate-transporting ATPase activity","type":"exact"},{"name":"iron-chelate-transporting ATPase activity","type":"broad"}],"termid":"GO:0015625"}


id: PBO:0083290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant is viable","termid":"PBO:0083290"}


id: MONDO:0030527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2C, localized","secondary_identifiers":["OMIM:619594","MEDGEN:1794221","UMLS:C5562011"],"synonyms":[{"name":"EBS2C","type":"exact"}],"termid":"MONDO:0030527","xrefs":{"Monarch":{"xref_id":"0030527"}}}


id: MONDO:0010619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked hypophosphatemia (XLH) is a hereditary renal phosphate-wasting disorder characterized by hypophosphatemia, rickets and/or osteomalacia, and diminished growth.","definition_xrefs":["Orphanet:89936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked dominant disease","termid":"MONDO:0020604"},{"relation_name":"is_a","term_name":"X-linked hypophosphatemic rickets","termid":"MONDO:0020720"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked dominant hypophosphatemic rickets","secondary_identifiers":["ICD10CM:E83.3","GARD:12943","NANDO:1200779","NCIT:C85234","SCTID:82236004","MEDGEN:196551","MESH:D053098","OMIM:307800","UMLS:C0733682","NCIT:C123265","DOID:0050445"],"synonyms":[{"name":"HPDR","type":"related"},{"name":"HYP","type":"related"},{"name":"X-linked dominant hypophosphatemic rickets","type":"exact"},{"name":"X-linked hereditary hypophosphatemic rickets","type":"exact"},{"name":"X-linked hypophosphatemia","type":"broad"},{"name":"X-linked hypophosphatemic rickets","type":"broad"},{"name":"XLH","type":"exact"},{"name":"XLHR","type":"related"},{"name":"hereditary hypophosphatemic rickets, X-linked","type":"exact"},{"name":"hypophophatemia, X-linked","type":"related"},{"name":"hypophophatemic vitamin D-resistant rickets","type":"related"},{"name":"hypophosphatemia, X-linked","type":"related"},{"name":"hypophosphatemia, vitamin D-resistant rickets","type":"exact"},{"name":"hypophosphatemic rickets X-linked dominant","type":"exact"},{"name":"hypophosphatemic rickets, X-linked","type":"exact"},{"name":"hypophosphatemic rickets, X-linked dominant","type":"related"},{"name":"hypophosphatemic rickets, X-linked dominant, X-linked dominant","type":"exact"},{"name":"hypophosphatemic vitamin D-resistant rickets","type":"related"},{"name":"rickets, vitamin D-resistant","type":"exact"},{"name":"vitamin D-resistant rickets, X-linked","type":"exact"}],"termid":"MONDO:0010619","xrefs":{"Monarch":{"xref_id":"0010619"}}}


id: FYPO:0006654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of G-quadruplex DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal G-quadruplex DNA binding","synonyms":[{"name":"normal G-quartet DNA binding","type":"exact"},{"name":"normal G4 DNA binding","type":"exact"}],"termid":"FYPO:0006654"}


id: SO:1000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet changes the stop codon, causing an elongated transcript sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000063 sequence_variant_causing_terminator_codon_change_in_transcript (obsolete SO:1000063)","synonyms":[{"name":"mutation causing terminator codon change in transcript","type":"related"},{"name":"sequence variant causing terminator codon change in transcript","type":"exact"}],"termid":"SO:1000063"}


id: PBO:0059133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 10","termid":"PBO:0059133"}


id: PBO:0067266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 340, pseudogene","termid":"PBO:0067266"}


id: PBO:0029714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_absent_from_cell_during_vegetative_growth","termid":"PBO:0029714"}


id: MONDO:0016337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","secondary_identifiers":["Orphanet:217619"],"termid":"MONDO:0016337","xrefs":{"Monarch":{"xref_id":"0016337"}}}


id: MONDO:0016293
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014872"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"night blindness","termid":"MONDO:0004588"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:368.61","SCTID:232061009","UMLS:C0339535","icd11.foundation:122338861","MESH:C536122","icd11.foundation:587494652","DOID:0050534","SCTID:193687000","MESH:C537743","DOID:8498","OMIMPS:310500","Orphanet:215","MEDGEN:83289"],"synonyms":[{"name":"Oguchi's disease","type":"broad"},{"name":"congenital essential nyctalopia","type":"exact"},{"name":"congenital night blindness","type":"exact"},{"name":"hereditary night blindness","type":"exact"},{"name":"night blindness, congenital stationary","type":"exact"}],"termid":"MONDO:0016293","terms_by_termid":{"MONDO:0014872":null},"xrefs":{"Monarch":{"xref_id":"0016293"}}}


id: PBO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1 like","termid":"PBO:0060384"}


id: PBO:0029727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis_resulting_in_chained_cells","termid":"PBO:0029727"}


id: GO:0050820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of coagulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of coagulation","synonyms":[{"name":"activation of coagulation","type":"narrow"},{"name":"positive regulation of clotting","type":"exact"},{"name":"stimulation of coagulation","type":"narrow"},{"name":"up regulation of coagulation","type":"exact"},{"name":"up-regulation of coagulation","type":"exact"},{"name":"upregulation of coagulation","type":"exact"}],"termid":"GO:0050820"}


id: GO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of heme from one side of a membrane to the other.","definition_xrefs":["PMID:29549126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"heme transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9661408","Reactome:R-HSA-917870","Reactome:R-HSA-917892"],"synonyms":[{"name":"haem transporter activity","type":"exact"},{"name":"heme transporter activity","type":"broad"}],"termid":"GO:0015232"}


id: MONDO:0010528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss of or impaired ability to smell. This may be caused by olfactory nerve diseases; paranasal sinus diseases; viral respiratory tract infections; craniocerebral trauma; smoking; and other conditions.","definition_xrefs":["MESH:D000857"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosmia","secondary_identifiers":["MEDGEN:1950","SCTID:44169009","icd11.foundation:1599308422","UMLS:C0003126","HP:0000458"],"synonyms":[{"name":"anosmia","type":"exact"},{"name":"anosmia (disease)","type":"exact"}],"termid":"MONDO:0010528","xrefs":{"Monarch":{"xref_id":"0010528"}}}


id: MONDO:0006709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumor or cancer of the common bile duct including the ampulla of vater and the sphincter of oddi.","definition_xrefs":["MESH:D003138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"extrahepatic bile duct neoplasm","termid":"MONDO:0021385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"common bile duct neoplasm","secondary_identifiers":["SCTID:126857009","UMLS:C0009442","DOID:4608","MEDGEN:3178"],"synonyms":[{"name":"common bile duct neoplasm (disease)","type":"exact"},{"name":"common bile duct tumor","type":"exact"},{"name":"common bile duct tumour","type":"exact"},{"name":"neoplasm of common bile duct","type":"exact"},{"name":"tumor of common bile duct","type":"exact"},{"name":"tumour of common bile duct","type":"exact"}],"termid":"MONDO:0006709","xrefs":{"Monarch":{"xref_id":"0006709"}}}


id: GO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lysine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity lysine transmembrane transporter activity","synonyms":[{"name":"high affinity lysine transmembrane transporter activity","type":"exact"},{"name":"high affinity lysine transporter activity","type":"broad"}],"termid":"GO:0005292"}


id: PBO:0108910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFF interacting protein","termid":"PBO:0108910"}


id: PBO:0051678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta A","termid":"PBO:0051678"}


id: PBO:0054539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1939","termid":"PBO:0054539"}


id: MONDO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the ovary. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovary leiomyosarcoma","secondary_identifiers":["EFO:0006718","UMLS:C1335163","DOID:5263","MEDGEN:233275"],"synonyms":[{"name":"leiomyosarcoma of ovary","type":"exact"},{"name":"leiomyosarcoma of the ovary","type":"exact"},{"name":"ovarian leiomyosarcoma","type":"exact"},{"name":"ovary leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003355","xrefs":{"Monarch":{"xref_id":"0003355"}}}


id: FYECO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfite was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sulfite","termid":"FYECO:0000234"}


id: MONDO:0018311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromelanosis is a congenital hyperpigmentation of the skin usually located on the acral areas of the fingers and toes. It is mostly observed in newborns or during the first years of life.","definition_xrefs":["Orphanet:39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acromelanosis","secondary_identifiers":["ICD9:709.09","MEDGEN:98038","GARD:4500","SCTID:239089006","UMLS:C0406779"],"synonyms":[{"name":"progressive acromelanosis","type":"related"}],"termid":"MONDO:0018311","xrefs":{"Monarch":{"xref_id":"0018311"}}}


id: FYPO:0001793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell shows increased resistance to conditions that degrade the cell wall.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"resistant to cell wall digestion","synonyms":[{"name":"resistant to cell wall digestion during mitotic cell cycle","type":"related"},{"name":"resistant to cell wall digestion during vegetative growth","type":"exact"}],"termid":"FYPO:0001793"}


id: MONDO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"locational disease characteristic","termid":"MONDO:0045040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restricted to specific location","secondary_identifiers":["MEDGEN:98236","UMLS:C0392752"],"synonyms":[{"name":"localised","type":"exact"},{"name":"localized","type":"exact"}],"termid":"MONDO:0045042","xrefs":{"Monarch":{"xref_id":"0045042"}}}


id: PBO:0041853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 3","termid":"PBO:0041853"}


id: MONDO:0011558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Usher syndrome type 2 that features a heterozygous frameshift mutation in the GPR98 gene and a heterozygous frameshift mutation in the PDZD7 gene. It is inherited in an autosomal recessive manner.","definition_xrefs":["OMIM:605472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 2","termid":"MONDO:0016484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 2C","secondary_identifiers":["GARD:8497","UMLS:C2931213","ICD10CM:H35.5","MEDGEN:419359","MESH:C536492","NCIT:C153174","DOID:0110839"],"synonyms":[{"name":"USH2C","type":"exact"},{"name":"USHER syndrome, type IIC","type":"related"},{"name":"Usher syndrome type IIC","type":"exact"},{"name":"Usher syndrome, type 2C","type":"related"},{"name":"Usher syndrome, type 2C, GPR98/PDZD7 digenic, autosomal recessive, digenic dominant","type":"exact"},{"name":"Usher syndrome, type 2C, autosomal recessive, digenic dominant","type":"exact"},{"name":"Usher syndrome, type IIC, GPR98/PDZD7 digenic, autosomal recessive, digenic dominant","type":"exact"},{"name":"Usher syndrome, type IIb","type":"related"},{"name":"Usher syndrome, type IIb, formerly","type":"related"},{"name":"Usher syndrome, type IIc, Gpr98/Pdzd7, digenic","type":"related"}],"termid":"MONDO:0011558","xrefs":{"Monarch":{"xref_id":"0011558"}}}


id: PBO:0043633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit epsilon","termid":"PBO:0043633"}


id: PBO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps54","termid":"PBO:0090445"}


id: MOD:00763
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Biantennary (-1 galactose)","type":"related"},{"name":"Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00763"}


id: PBO:0042404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14C","termid":"PBO:0042404"}


id: PBO:0051446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-32 (non-functional)","termid":"PBO:0051446"}


id: GO:0140964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of auxin within a cell.","definition_xrefs":["PMID:22314799","PMID:19506555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular auxin homeostasis","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"cellular auxin homeostasis","type":"exact"}],"termid":"GO:0140964"}


id: GO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH + H+.","definition_xrefs":["EC:1.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alanine dehydrogenase activity","secondary_identifiers":["RHEA:18405","MetaCyc:ALANINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"AlaDH","type":"related"},{"name":"L-alanine dehydrogenase activity","type":"related"},{"name":"L-alanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD-dependent alanine dehydrogenase activity","type":"related"},{"name":"NAD-linked alanine dehydrogenase activity","type":"related"},{"name":"NADH-dependent alanine dehydrogenase activity","type":"related"},{"name":"alanine oxidoreductase activity","type":"related"},{"name":"alpha-alanine dehydrogenase activity","type":"related"}],"termid":"GO:0000286"}


id: PBO:0076923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor CP2 like 1","termid":"PBO:0076923"}


id: PBO:0063613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4","termid":"PBO:0063613"}


id: MONDO:0016157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of fukutin (obsolete MONDO:0016157)","secondary_identifiers":["Orphanet:207122"],"termid":"MONDO:0016157","xrefs":{"Monarch":{"xref_id":"0016157"}}}


id: MONDO:0012524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"familial hypoaldosteronism","termid":"MONDO:0018541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticosterone methyloxidase type 2 deficiency","secondary_identifiers":["OMIM:610600","MEDGEN:483046","UMLS:C3463917"],"synonyms":[{"name":"18-oxidase deficiency","type":"related"},{"name":"Cmo 2 deficiency","type":"related"},{"name":"aldosterone deficiency 2","type":"related"},{"name":"aldosterone deficiency due to deficiency of steroid 18-oxidase","type":"related"},{"name":"corticosterone methyloxidase type II deficiency","type":"related"},{"name":"hyperreninemic hypoaldosteronism, familial, 1","type":"related"},{"name":"hypoaldosteronism, congenital, due to CMO II deficiency","type":"exact"},{"name":"steroid 18-oxidase deficiency","type":"related"}],"termid":"MONDO:0012524","xrefs":{"Monarch":{"xref_id":"0012524"}}}


id: PBO:0028721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint","termid":"PBO:0028721"}


id: FYECO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"3'5'-cyclic AMP was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000063 absence of 3'5'-cyclic AMP (obsolete FYECO:0000063)","termid":"FYECO:0000063"}


id: GO:0140142
data:
  {"annotated_genes":["SJAG_02998","SJAG_01083","SJAG_04366","SJAG_03693","SJAG_01358","SJAG_01534","SJAG_04411","SJAG_03959","SJAG_01909","SJAG_03662","SJAG_02661","SJAG_02425","SJAG_00840","SJAG_00968","SJAG_01789","SJAG_03470","SJAG_00586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117658,71982,76535,76704,113923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[71245,78166,73105,96868,117659,76711,73037,74136,114850,75147,93763,93816,74160,102920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a cargo between the nucleus and the cytoplasm by moving along with the cargo. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01083":null,"SJAG_01358":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_02425":null,"SJAG_02661":null,"SJAG_02998":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04411":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"nucleocytoplasmic carrier activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090631","GO:0061717"],"synonyms":[{"name":"miRNA transporter activity","type":"narrow"},{"name":"nucleocytoplasmic importin/exportin activity","type":"exact"},{"name":"pre-miRNA transporter activity","type":"narrow"}],"termid":"GO:0140142","terms_by_termid":{"GO:0005049":null,"GO:0061608":null}}


id: PBO:0027088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027088"}


id: MONDO:0017648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder characterized by rapid, jerky, irregular, and involuntary movements (chorea), especially of the face and limbs. Additional symptoms may include muscle weakness, slurred speech, headaches, and seizures.","definition_xrefs":["GARD:0007716"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete postinfectious autoimmune disease with chorea (obsolete MONDO:0017647)","termid":"MONDO:0017647"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sydenham chorea","secondary_identifiers":["icd11.foundation:1295812812","MEDGEN:57506","Orphanet:306731","UMLS:C0152113","NCIT:C168445","GARD:7716","MedDRA:10042732"],"termid":"MONDO:0017648","xrefs":{"Monarch":{"xref_id":"0017648"}}}


id: PBO:0077549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 2","termid":"PBO:0077549"}


id: GO:0102188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102188)","termid":"GO:0102188"}


id: PR:P0CT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-4 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.13c","synonyms":[{"name":"Spom972h-Tf2-4","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT37"}


id: PBO:0048129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 9","termid":"PBO:0048129"}


id: PBO:0050485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A13","termid":"PBO:0050485"}


id: GO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanine + L-histidine + ATP = carnosine + ADP + phosphate + H+.","definition_xrefs":["RHEA:19297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"carnosine synthase activity","secondary_identifiers":["Reactome:R-HSA-6786245","EC:6.3.2.11","MetaCyc:CARNOSINE-SYNTHASE-RXN"],"synonyms":[{"name":"L-histidine:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"carnosine synthetase activity","type":"related"},{"name":"carnosine-anserine synthetase activity","type":"related"},{"name":"carnosine-homocarnosine synthetase activity","type":"related"},{"name":"homocarnosine-carnosine synthetase activity","type":"related"}],"termid":"GO:0047730"}


id: PBO:0053520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 513","termid":"PBO:0053520"}


id: MONDO:0007088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"Alzheimer disease type 1","secondary_identifiers":["OMIM:104300","UMLS:C1863052","DOID:0080348","MEDGEN:354892","DECIPHER:48","MESH:C536594","GARD:9465"],"synonyms":[{"name":"AD","type":"related"},{"name":"AD1","type":"related"},{"name":"Alzheimer disease","type":"related"},{"name":"Alzheimer disease 1","type":"related"},{"name":"Alzheimer disease 1, familial","type":"exact"},{"name":"Alzheimer disease, early-onset, with cerebral amyloid angiopathy","type":"related"},{"name":"Alzheimer disease, familial, 1","type":"related"},{"name":"Alzheimer disease, late-onset, susceptibility to","type":"related"},{"name":"Alzheimer disease, protection against","type":"related"},{"name":"Alzheimer disease, susceptibility to","type":"related"},{"name":"early-onset familial form of Alzheimer disease","type":"broad"},{"name":"presenile and senile dementia","type":"related"}],"termid":"MONDO:0007088","xrefs":{"Monarch":{"xref_id":"0007088"}}}


id: MONDO:0008372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"retinal aplasia","secondary_identifiers":["UMLS:C1867331","MEDGEN:356752","MESH:C566720","GARD:15109","OMIM:179900"],"synonyms":[{"name":"amaurosis congenita","type":"related"},{"name":"retinal aplasia","type":"exact"}],"termid":"MONDO:0008372","xrefs":{"Monarch":{"xref_id":"0008372"}}}


id: PBO:0043228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin like cytokine factor 1","termid":"PBO:0043228"}


id: MONDO:0006522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal or diffuse thickening of the skin not inherited as a primary genetic disorder. Causes include inflammatory skin disorders, infectious disorders, lymphedema, and medications.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired keratosis","secondary_identifiers":["NCIT:C34746","UMLS:C0022581","MEDGEN:44016","DOID:13072","SCTID:400166009","ICD9:701.1"],"synonyms":[{"name":"acquired hyperkeratosis","type":"related"},{"name":"acquired keratoderma","type":"exact"},{"name":"acquired keratosis","type":"exact"},{"name":"keratoderma - acquired","type":"exact"},{"name":"keratoderma, acquired","type":"exact"}],"termid":"MONDO:0006522","xrefs":{"Monarch":{"xref_id":"0006522"}}}


id: PBO:0091835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf1, reactive intermediate imine deaminase A homolog Mmf1","termid":"PBO:0091835"}


id: GO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that regulates fever generation.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}


id: PBO:0090208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1","termid":"PBO:0090208"}


id: MONDO:0700116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disorder caused by biallelic variants in NDE1 that is characterized by extreme microcephaly (typically head circumference of more than 10 standard deviations (SD) below the mean), profound motor and intellectual disability, spasticity, and incomplete cerebral formation. Radiologic studies demonstrate overt microcephaly with cortical dysgenesis ranging from simplification to pachygyria/lissencephaly to hydranencephaly. Agenesis of the corpus callosum as well as hypoplasia of the brainstem and cerebellum are typically present.","definition_xrefs":["PMID:21529751","PMID:22526350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116","xrefs":{"Monarch":{"xref_id":"0700116"}}}


id: GO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The net movement of nuclei towards one another, leading to the bilateral transfer of genetic material in organisms undergoing conjugation without cellular fusion.","definition_xrefs":["GOC:clt","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"karyogamy involved in conjugation with mutual genetic exchange","termid":"GO:0000744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear migration involved in conjugation with mutual genetic exchange","synonyms":[{"name":"nuclear exchange during conjugation without cellular fusion","type":"related"},{"name":"nuclear migration involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000745"}


id: PBO:0075830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 4 pseudogene 1","termid":"PBO:0075830"}


id: PBO:0017477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contains_process","termid":"PBO:0017477"}


id: PBO:0077749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOLLIP divergent transcript","termid":"PBO:0077749"}


id: PBO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter (predicted)","termid":"PBO:0017922"}


id: GO:0071737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgG immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of an IgG isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgG immunoglobulin complex","termid":"GO:0071735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"IgG B cell receptor complex","synonyms":[{"name":"membrane-bound IgG","type":"narrow"},{"name":"membrane-bound IgG1","type":"narrow"},{"name":"membrane-bound IgG2","type":"narrow"},{"name":"membrane-bound IgG2a","type":"narrow"},{"name":"membrane-bound IgG2b","type":"narrow"},{"name":"membrane-bound IgG2c","type":"narrow"},{"name":"membrane-bound IgG3","type":"narrow"},{"name":"membrane-bound IgG4","type":"narrow"},{"name":"surface IgG","type":"narrow"},{"name":"surface IgG1","type":"narrow"},{"name":"surface IgG2","type":"narrow"},{"name":"surface IgG2a","type":"narrow"},{"name":"surface IgG2b","type":"narrow"},{"name":"surface IgG2c","type":"narrow"},{"name":"surface IgG3","type":"narrow"},{"name":"surface IgG4","type":"narrow"}],"termid":"GO:0071737"}


id: PBO:0028764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery_during_cellular_response_to_heat","termid":"PBO:0028764"}


id: MONDO:0012161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Susceptibility to respiratory infections associated with CD8 alpha chain mutation is a rare primary immunodeficiency due to a defect in adaptive immunity characterized by the absence of CD8+ T cells with normal immunoglobulin and specific antibody titres in blood and susceptibility to recurrent respiratory bacterial and viral infections. Symptom severity range from fatal respiratory insufficiency to mild or asymptomatic phenotypes.","definition_xrefs":["Orphanet:169085"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to respiratory infections associated with CD8alpha chain mutation","secondary_identifiers":["OMIM:608957","MEDGEN:323058","SCTID:766983005","MESH:C563824","UMLS:C1837065","NANDO:2200699","NANDO:1200326"],"synonyms":[{"name":"CD8 deficiency, familial","type":"related"},{"name":"familial CD8 deficiency","type":"exact"},{"name":"susceptibility to respiratory infections associated with CD8alpha chain mutation","type":"exact"}],"termid":"MONDO:0012161","xrefs":{"Monarch":{"xref_id":"0012161"}}}


id: PBO:0045465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D2","termid":"PBO:0045465"}


id: PBO:0067247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 320, pseudogene","termid":"PBO:0067247"}


id: MONDO:0971062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism in which the cause of the disease is a point mutation in the gene NR4A2.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","Orphanet:660012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism","termid":"MONDO:0859257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0003441"],"is_obsolete":false,"name":"developmental delay-language impairment-dopa responsive dystonia-parkinsonism syndrome due to a NR4A2 point mutation","secondary_identifiers":["MEDGEN:1863959","UMLS:C5925124"],"termid":"MONDO:0971062","xrefs":{"Monarch":{"xref_id":"0971062"}}}


id: MONDO:0019601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of axonal hereditary motor and sensory neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive axonal hereditary motor and sensory neuropathy (obsolete MONDO:0019601)","secondary_identifiers":["Orphanet:91024"],"synonyms":[{"name":"AR-CMT2","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"axonal hereditary motor and sensory neuropathy, autosomal recessive","type":"exact"}],"termid":"MONDO:0019601","xrefs":{"Monarch":{"xref_id":"0019601"}}}


id: GO:1905047
data:
  {"annotated_genes":["SJAG_00794","SJAG_02795","SJAG_00773","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98631],"is_not":false,"summary":null,"term":"GO:1905047"},{"annotations":[76133,95673,78200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitotic spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_02795":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"mitotic spindle pole body organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1905047","terms_by_termid":{"GO:0000073":null,"GO:1905047":null}}


id: PATO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's width being notably higher than its length.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broad","termid":"PATO:0002359"}


id: MONDO:0016471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pachyonychia congenita (PC) is a rare genodermatosis predominantly featuring painful palmoplantar keratoderma, thickened nails, cysts and whitish oral mucosa.","definition_xrefs":["Orphanet:2309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita","secondary_identifiers":["NORD:1542","NCIT:C84986","MEDGEN:78556","OMIMPS:167200","UMLS:C0265334","MESH:D053549","icd11.foundation:1446983705","GARD:10753","DOID:0050449"],"synonyms":[{"name":"Jackson-Lawler type pachyonychia congenita","type":"exact"},{"name":"Jadassohn-Lewandowsky syndrome","type":"exact"},{"name":"PC","type":"exact"},{"name":"congenital pachyonychia","type":"related"},{"name":"pachyonychia congenita syndrome","type":"related"},{"name":"pachyonychia congenita type 1","type":"narrow"},{"name":"pachyonychia congenita, Jadassohn-Lewandowsky type","type":"exact"}],"termid":"MONDO:0016471","xrefs":{"Monarch":{"xref_id":"0016471"}}}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000005","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000002"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: PBO:0054260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1645","termid":"PBO:0054260"}


id: PBO:0027849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027849"}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: GO:1901339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"}


id: GO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylamine (CH3NH2).","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylamine metabolic process","synonyms":[{"name":"methylamine metabolism","type":"exact"},{"name":"methylammonium metabolic process","type":"exact"},{"name":"methylammonium metabolism","type":"exact"}],"termid":"GO:0030416"}


id: MOD:00722
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-glutamine residue with one methyl group.","definition_xrefs":["OMSSA:14","Unimod:34#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated glutamine","termid":"MOD:00659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-glutamine","synonyms":[{"name":"Me1Gln","type":"exact"},{"name":"methylq","type":"exact"}],"termid":"MOD:00722"}


id: MONDO:0016658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"8p23.1 deletion involves a partial deletion of the short arm of chromosome 8 characterized by low birth weight, postnatal growth deficiency, mild intellectual deficit, hyperactivity, craniofacial abnormalities, and congenital heart defects.","definition_xrefs":["Orphanet:251071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 8","termid":"MONDO:0016890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8p23.1 microdeletion syndrome","secondary_identifiers":["MESH:C537827","DECIPHER:39","SCTID:716381003","UMLS:C2931638","MEDGEN:419458","GARD:3769"],"synonyms":[{"name":"8p23.1 deletion","type":"related"},{"name":"Del(8)(p23.1)","type":"exact"},{"name":"chromosome 8p23.1 deletion","type":"related"},{"name":"deletion 8p23.1","type":"related"},{"name":"monosomy 8p23.1","type":"exact"}],"termid":"MONDO:0016658","xrefs":{"Monarch":{"xref_id":"0016658"}}}


id: FYPO:0003035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to ultraviolet light is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to UV","synonyms":[{"name":"normal RNA accumulation during cellular response to UV","type":"related"},{"name":"normal RNA level during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to UV","type":"narrow"},{"name":"normal protein level during cellular response to ultraviolet light","type":"exact"},{"name":"normal transcript level during cellular response to UV","type":"exact"}],"termid":"FYPO:0003035"}


id: FYPO:0005966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal potassium import","synonyms":[{"name":"abnormal cellular potassium import","type":"exact"},{"name":"abnormal potassium import across plasma membrane","type":"exact"},{"name":"abnormal potassium import during mitotic cell cycle","type":"related"},{"name":"abnormal potassium import during vegetative growth","type":"exact"},{"name":"abnormal potassium import into cell","type":"exact"},{"name":"abnormal potassium ion import","type":"exact"}],"termid":"FYPO:0005966"}


id: FYPO:0001169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proton (H+) transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal proton transport","synonyms":[{"name":"normal hydrogen ion transport","type":"exact"},{"name":"normal proton transmembrane transport","type":"exact"},{"name":"normal proton transport during mitotic cell cycle","type":"related"},{"name":"normal proton transport during vegetative growth","type":"exact"}],"termid":"FYPO:0001169"}


id: GO:0072429
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104520],"is_not":false,"summary":null,"term":"GO:0072429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of intra-S DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to intra-S DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intra-S DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in intra-S DNA damage checkpoint","type":"exact"}],"termid":"GO:0072429","terms_by_termid":{"GO:0072429":null}}


id: GO:1904223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucuronosyltransferase activity.","definition_xrefs":["PMID:20610558","GO_REF:0000059","GOC:BHF","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucuronosyltransferase activity (obsolete GO:1904223)","synonyms":[{"name":"regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"regulation of GT activity","type":"exact"},{"name":"regulation of PNP-UDPGT","type":"related"},{"name":"regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDPGA transferase activity","type":"exact"},{"name":"regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDPGT activity","type":"exact"},{"name":"regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of pnp-UDPGT activity","type":"narrow"},{"name":"regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"}],"termid":"GO:1904223"}


id: PBO:0042858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 74","termid":"PBO:0042858"}


id: PBO:0057153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 301a","termid":"PBO:0057153"}


id: GO:0015364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + phosphate(in) = dicarboxylate(in) +  phosphate(out).","definition_xrefs":["TC:2.A.29.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"dicarboxylate:phosphate antiporter activity","synonyms":[{"name":"dicarboxylate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015364"}


id: MONDO:0006063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carbohydrate metabolic disorder (obsolete MONDO:0006063)","termid":"MONDO:0006063","xrefs":{"Monarch":{"xref_id":"0006063"}}}


id: PBO:0029187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_actin_filament_binding","termid":"PBO:0029187"}


id: GO:0010874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cholesterol efflux","termid":"GO:0010874"}


id: PBO:0073267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 11","termid":"PBO:0073267"}


id: GO:0120181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a focal adhesion into its constituent components. A focal adhesion is a complex of intracellular signaling and structural proteins that provides a structural link between the internal actin cytoskeleton and the ECM, and also functions as a locus of signal transduction activity.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction disassembly","termid":"GO:0120180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"focal adhesion disassembly","termid":"GO:0120181"}


id: PR:O42955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.07c","synonyms":[{"name":"Spom972h-ppr3","type":"exact"},{"name":"mitochondrial group I intron splicing factor dmr1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42955"}


id: _global:interaction_genotype_a
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_a","termid":"_global:interaction_genotype_a"}


id: GO:0047389
data:
  {"annotated_genes":["SJAG_00622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71966],"is_not":false,"summary":null,"term":"GO:0047389"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-1-glycero-3-phosphocholine = glycerol-3-phosphate + choline.","definition_xrefs":["EC:3.1.4.2","MetaCyc:3.1.4.2-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glycerophosphocholine phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6814132","RHEA:16061"],"synonyms":[{"name":"glycerolphosphorylcholine phosphodiesterase activity","type":"related"},{"name":"glycerophosphinicocholine diesterase activity","type":"related"},{"name":"glycerophosphohydrolase activity","type":"related"},{"name":"glycerylphosphorylcholinediesterase activity","type":"related"},{"name":"sn-glycero-3-phosphocholine glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phosphorylcholine diesterase activity","type":"related"}],"termid":"GO:0047389","terms_by_termid":{"GO:0047389":null}}


id: MONDO:0700022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 15 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 disorder","termid":"MONDO:0700022","xrefs":{"Monarch":{"xref_id":"0700022"}}}


id: GO:1990458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipooligosaccharide. Lipooligosaccharides (LOSs) are the major glycolipids expressed on mucosal Gram-negative bacteria.","definition_xrefs":["GOC:hjd","PMID:8894399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipooligosaccharide binding","synonyms":[{"name":"LOS binding","type":"related"},{"name":"endotoxin binding","type":"related"}],"termid":"GO:1990458"}


id: MONDO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heavy chain disease (obsolete MONDO:0000655)","termid":"MONDO:0000655","xrefs":{"Monarch":{"xref_id":"0000655"}}}


id: PBO:0076590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 10C","termid":"PBO:0076590"}


id: PBO:0006206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_or_complex","termid":"PBO:0006206"}


id: MONDO:0017359
data:
  {"annotated_genes":["SJAG_01597","SJAG_02641","SJAG_00737","SJAG_03560","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009787"},{"annotations":[85712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012435"},{"annotations":[87361,87360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044723"},{"annotations":[85651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044724"}]},"cv_name":"mondo","definition":"A group of five inherited disorders caused by mutations in the AUH, DNAJC19, OPA3, and TAZ genes. The disorders are characterized by impairment in the function of mitochondria, resulting in the accumulation and excretion of 3-methylglutaconic acid, and the presence of 3-methylglutaric acid in the urine.","definition_xrefs":["NCIT:C98678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01597":null,"SJAG_02641":null,"SJAG_03258":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060336","OMIMPS:250950","UMLS:C3696376","ICD10CM:E71.111","Orphanet:289902","NANDO:1200989","GARD:12966","icd11.foundation:1008261602","MESH:C579867","MEDGEN:777186","NANDO:2200496","SCTID:237950009"],"termid":"MONDO:0017359","terms_by_termid":{"MONDO:0009787":null,"MONDO:0012435":null,"MONDO:0044723":null,"MONDO:0044724":null},"xrefs":{"Monarch":{"xref_id":"0017359"}}}


id: PBO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png3 (predicted)","termid":"PBO:0002095"}


id: PBO:0088469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc4","termid":"PBO:0088469"}


id: GO:0018748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iprodione amidohydrolase activity (obsolete GO:0018748)","termid":"GO:0018748"}


id: GO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell differentiation","termid":"GO:0045676"}


id: PBO:0040449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10B (putative)","termid":"PBO:0040449"}


id: PBO:0055724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 1","termid":"PBO:0055724"}


id: GO:0038020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of an insulin receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive an insulin signal. Internalized insulin receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["PMID:3907718","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of insulin receptor signaling pathway","termid":"GO:0046628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insulin receptor recycling","secondary_identifiers":["Reactome:R-HSA-77387"],"termid":"GO:0038020"}


id: GO:1901370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glutathione stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glutathione","termid":"GO:1901370"}


id: GO:0044233
data:
  {"annotated_genes":["SJAG_01305","SJAG_03416","SJAG_03710","SJAG_01929","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70284,117005,80440,75142,70367],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"}]},"cv_name":"cellular_component","definition":"A zone of apposition between endoplasmic-reticulum and mitochondrial membranes, structured by bridging complexes. These contact sites are thought to facilitate inter-organelle calcium and phospholipid exchange.","definition_xrefs":["PMID:19556461","GOC:jl","PMID:22078959","PMID:29684109","PMID:29626751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mitochondria-associated endoplasmic reticulum membrane contact site","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondrion membrane contact site","type":"exact"},{"name":"MAM","type":"related"},{"name":"endoplasmic reticulum-mitochondrion membrane contact site","type":"exact"},{"name":"mitochondria-associated ER membrane","type":"exact"},{"name":"mitochondria-associated membrane","type":"exact"},{"name":"mitochondria-endoplasmic reticulum (ER) contact","type":"exact"}],"termid":"GO:0044233","terms_by_termid":{"GO:0032865":null}}


id: PBO:0039398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 3","termid":"PBO:0039398"}


id: GO:0033149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FFAT motif, a short motif containing diphenylalanine in an acidic tract that targets proteins to the cytosolic surface of the ER and to the nuclear membrane by binding directly to members of the VAP (VAMP-associated protein) protein family.","definition_xrefs":["PMID:15455074","PMID:16004875","PMID:12727870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"FFAT motif binding","termid":"GO:0033149"}


id: PBO:0077785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II alpha","termid":"PBO:0077785"}


id: PBO:0083849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp43p (OIP2, EXOSC8); protein abundance increases in response to DNA replication stress","termid":"PBO:0083849"}


id: PBO:0065010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 14","termid":"PBO:0065010"}


id: GO:0022614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a membrane to a target membrane, mediated by proteins protruding from the two membranes. Docking requires only that the membranes come close enough for the proteins to interact and adhere.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane docking","termid":"GO:0022406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane to membrane docking","synonyms":[{"name":"membrane-membrane docking","type":"exact"}],"termid":"GO:0022614"}


id: FYPO:0003526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actin filament-based movement is decreased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","GO:0030048","PMID:24954052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased actin filament-based movement","synonyms":[{"name":"decreased actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"decreased actin filament-based movement during vegetative growth","type":"exact"},{"name":"reduced actin filament-based movement","type":"exact"}],"termid":"FYPO:0003526"}


id: MONDO:0006094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor (small round blue cell tumor) of the thorax which can involve the periosteum, thoracic wall and/or pleura though it spares the lung parenchyma.","definition_xrefs":["NCIT:C7542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Askin tumor","secondary_identifiers":["DOID:0050608","MESH:C563168","MEDGEN:209112","EFO:1000095","ICDO:9365/3","UMLS:C0877849"],"synonyms":[{"name":"Askin tumor","type":"exact"},{"name":"Askin's tumor","type":"exact"},{"name":"Askin's tumour","type":"exact"},{"name":"PNET of thoracopulmonary region","type":"exact"},{"name":"peripheral neuroectodermal tumor of thoracopulmonary region","type":"exact"},{"name":"peripheral neuroectodermal tumour of thoracopulmonary region","type":"exact"},{"name":"small cell tumor of thoracopulmonary region","type":"exact"},{"name":"small cell tumour of thoracopulmonary region","type":"exact"}],"termid":"MONDO:0006094","xrefs":{"Monarch":{"xref_id":"0006094"}}}


id: GO:0019140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myo-inositol = ADP + 1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol 3-kinase activity","secondary_identifiers":["RHEA:21804","MetaCyc:MYO-INOSITOL-1-KINASE-RXN"],"synonyms":[{"name":"ATP:myo-inositol 1-phosphotransferase activity","type":"related"},{"name":"inositol 1-kinase activity","type":"related"},{"name":"inositol-1-kinase (phosphorylating)","type":"related"},{"name":"myo-inositol 1-kinase activity","type":"related"},{"name":"myo-inositol 3-kinase activity","type":"exact"},{"name":"myoinositol kinase activity","type":"broad"}],"termid":"GO:0019140"}


id: PBO:0068756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 1","termid":"PBO:0068756"}


id: PBO:0030303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_activation_of_monopolar_cell_growth","termid":"PBO:0030303"}


id: PBO:0013005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsense_mutation","termid":"PBO:0013005"}


id: GO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"negatively_regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing","synonyms":[{"name":"negative regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060149"}


id: PBO:0070770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12","termid":"PBO:0070770"}


id: PBO:0078766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (ATT) 1-1","termid":"PBO:0078766"}


id: PBO:0051056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-3","termid":"PBO:0051056"}


id: GO:0052454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052454)","synonyms":[{"name":"modulation by organism of symbiont JA-mediated defense response","type":"exact"},{"name":"modulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052454"}


id: GO:0045630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type 2 immune response","termid":"GO:0002830"},{"relation_name":"is_a","term_name":"positive regulation of T-helper cell differentiation","termid":"GO:0045624"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell differentiation","termid":"GO:0045628"},{"relation_name":"positively_regulates","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T-helper 2 cell differentiation","synonyms":[{"name":"activation of T-helper 2 cell differentiation","type":"narrow"},{"name":"positive regulation of T-helper 2 cell development","type":"related"},{"name":"stimulation of T-helper 2 cell differentiation","type":"narrow"},{"name":"up regulation of T-helper 2 cell differentiation","type":"exact"},{"name":"up-regulation of T-helper 2 cell differentiation","type":"exact"},{"name":"upregulation of T-helper 2 cell differentiation","type":"exact"}],"termid":"GO:0045630"}


id: GO:0062247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A intracellular vesicle that is part of a chloroplast.","definition_xrefs":["PMID:32245810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"chloroplast vesicle","termid":"GO:0062247"}


id: GO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"5-carbamoylmethyl uridine residue modification","synonyms":[{"name":"5-carbamoylmethyluridine metabolic process","type":"related"}],"termid":"GO:0080178"}


id: FYPO:0000509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export is normal (i.e. indistinguishable from wild type). Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleocytoplasmic transport","termid":"FYPO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal nuclear export","synonyms":[{"name":"normal nuclear export during mitotic cell cycle","type":"related"},{"name":"normal nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: normal","type":"related"}],"termid":"FYPO:0000509"}


id: PBO:0064451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POF1B actin binding protein","termid":"PBO:0064451"}


id: GO:0019552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-hydroxyglutarate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P162-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glutamate catabolic process","termid":"GO:0019670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006091"],"is_obsolete":false,"name":"glutamate catabolic process via 2-hydroxyglutarate","synonyms":[{"name":"glutamate fermentation via 2-hydroxyglutarate","type":"exact"}],"termid":"GO:0019552"}


id: MONDO:0020553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary pulmonary hemosiderosis is a respiratory disease due to the deposition of hemosiderin-laden macrophages in lungs as a result of repeated alveolar hemorrhage secondary to another disease, especially dysimmunitary disorders (i.e. Heiner syndrome, autoimmune diseases), thrombotic disorders and cardiovascular disorders such as mitral stenosis. It manifests as a triad of hemoptysis, anemia and diffuse parenchymal infiltrates on chest radiography","definition_xrefs":["Orphanet:99930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary pulmonary hemosiderosis","secondary_identifiers":["icd11.foundation:878618614","MEDGEN:909854","GARD:19713","UMLS:C4274326","ICD10EXP:J99.8*","SCTID:716712004","ICD10EXP:E83.1+"],"termid":"MONDO:0020553","xrefs":{"Monarch":{"xref_id":"0020553"}}}


id: RO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. ","direct_ancestors":[{"relation_name":"is_a","term_name":"has_synaptic_terminal_in","termid":"RO:0002130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}


id: MONDO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urachal cancer is a type of bladder cancer, making up less than 1% of all bladder cancers. The urachus is a structure normally only present during development in the womb that connects the bellybutton and the bladder. This connection normally disappears before birth, but in some people remains. Urachalcancers are usually diagnosed in adults in their 50's and 60's and may develop at the dome or anterior wall of the bladder, along the midline of the body (including the belly button), and between the pubis symphasis and the bladder.Most urachal cancersare adenocarcinomas (cancers that develop from gland cells).Others may besarcomas (which develop from connective tissue -such as leiomyosarcoma, rhabdomyosarcoma, and malignant fibrous histiocytoma), small cell carcinomas, transitional cell cancer, and mixed neoplasias. Most individuals with urachal cancer have symptoms of with hematuria (blood in urine). Other symptoms may include abdominal pain, a palpable abdominal mass, mucinuria, and bacteriuria. Treatment usually involved surgery to remove the cancer.","definition_xrefs":["GARD:0007836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder urachal carcinoma","secondary_identifiers":["UMLS:C2931202","NCIT:C39842","ONCOTREE:URCA","MESH:C536475","DOID:5958","MEDGEN:419015"],"synonyms":[{"name":"bladder urachal cancer","type":"exact"},{"name":"bladder urachal carcinoma","type":"exact"},{"name":"urachal carcinoma","type":"related"}],"termid":"MONDO:0003715","xrefs":{"Monarch":{"xref_id":"0003715"}}}


id: GO:1900241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"positively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenotypic switching","synonyms":[{"name":"activation of phenotypic dimorphism","type":"related"},{"name":"activation of phenotypic switching","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic switching","type":"exact"},{"name":"up-regulation of phenotypic dimorphism","type":"related"},{"name":"up-regulation of phenotypic switching","type":"exact"},{"name":"upregulation of phenotypic dimorphism","type":"related"},{"name":"upregulation of phenotypic switching","type":"exact"}],"termid":"GO:1900241"}


id: MONDO:0014259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the FBXO38 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 2","termid":"MONDO:0015352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 2D","secondary_identifiers":["MEDGEN:854832","UMLS:C3888271","DOID:0111210","OMIM:615575","GARD:18265"],"synonyms":[{"name":"FBXO38 neuronopathy, distal hereditary motor","type":"exact"},{"name":"HMN 2D","type":"related"},{"name":"HMN2D","type":"related"},{"name":"neuronopathy, distal hereditary motor caused by mutation in FBXO38","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type IID","type":"related"},{"name":"neuropathy, distal hereditary motor, type 2D","type":"related"},{"name":"spinal muscular atrophy, distal, autosomal dominant, calf-predominant","type":"related"}],"termid":"MONDO:0014259","xrefs":{"Monarch":{"xref_id":"0014259"}}}


id: MONDO:0019594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to a testosterone synthesis defect (obsolete MONDO:0019594)","secondary_identifiers":["Orphanet:90783"],"synonyms":[{"name":"46,XY DSD due to a testosterone synthesis defect","type":"exact"}],"termid":"MONDO:0019594","xrefs":{"Monarch":{"xref_id":"0019594"}}}


id: PBO:0053231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lengsin, lens protein with glutamine synthetase domain","termid":"PBO:0053231"}


id: PBO:0087838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third-largest subunit of DNA polymerase II (DNA polymerase epsilon); required to maintain fidelity of chromosomal replication and also for inheritance of telomeric silencing; stabilizes the interaction of Pol epsilon with primer-template DNA, positively affecting the processivity of the polymerase and exonuclease activities of Pol epsilon; mRNA abundance peaks at the G1/S boundary of the cell cycle; DPB3 has a paralog, DLS1, that arose from the whole genome duplication","termid":"PBO:0087838"}


id: PBO:0043693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5A pseudogene 2","termid":"PBO:0043693"}


id: PBO:0117070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P4HB antisense RNA 1","termid":"PBO:0117070"}


id: PBO:0085340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in the cytoplasm-to-vacuole targeting (CVT) pathway, autophagy, micronucleophagy and mitophagy; binds to several phosphoinositides including: PtdIns(3,5)P2, PI3P and PI4P; involved in PI3P-dependent recruitment and organization of both the Atg12-Atg5-Atg16 complex and Atg8p at the pre-autophagosomal structure; necessary for oxidant-induced cell death; WD-40 repeat containing PROPPIN family member","termid":"PBO:0085340"}


id: MONDO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"upper thoracic spina bifida cystica","secondary_identifiers":["Orphanet:268770","GARD:20964"],"termid":"MONDO:0017075","xrefs":{"Monarch":{"xref_id":"0017075"}}}


id: PBO:0088357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase","termid":"PBO:0088357"}


id: PBO:0111854
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2C2 type","termid":"PBO:0111854"}


id: GO:0050780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dopamine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"dopamine receptor binding","termid":"GO:0050780"}


id: GO:0018850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-2,5-dihydro-5-oxofuran-2-acetate = 3-chloro-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"chloromuconate cycloisomerase activity","secondary_identifiers":["RHEA:11032"],"synonyms":[{"name":"2-chloro-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"},{"name":"muconate cycloisomerase II activity","type":"related"}],"termid":"GO:0018850"}


id: PBO:0038507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 2","termid":"PBO:0038507"}


id: GO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: creatine(out) + Na+(out) = creatine(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine transmembrane transporter activity","termid":"GO:0005308"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"creatine:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-200396"],"synonyms":[{"name":"sodium/chloride-dependent creatine transporter","type":"broad"}],"termid":"GO:0005309"}


id: PBO:0065749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 1","termid":"PBO:0065749"}


id: PBO:0088457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body component, Nst1","termid":"PBO:0088457"}


id: GO:0060767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}


id: PBO:0029124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_saccharopine_dehydrogenase_activity","termid":"PBO:0029124"}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: PBO:0088039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme; mediates selective degradation of short-lived, abnormal, or excess proteins, including histone H3; central component of the cellular stress response; expression is heat inducible; protein abundance increases in response to DNA replication stress; UBC5 has a paralog, UBC4, that arose from the whole genome duplication","termid":"PBO:0088039"}


id: PBO:0087710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein abundance increases in response to DNA replication stress","termid":"PBO:0087710"}


id: GO:0012505
data:
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id: MONDO:1010220
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id: GO:1903796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","PMID:11336802","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"negatively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inorganic anion transmembrane transport","synonyms":[{"name":"down regulation of inorganic anion membrane transport","type":"exact"},{"name":"down regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"down-regulation of inorganic anion membrane transport","type":"exact"},{"name":"down-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"downregulation of inorganic anion membrane transport","type":"exact"},{"name":"downregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane inorganic anion transport","type":"exact"},{"name":"inhibition of inorganic anion membrane transport","type":"narrow"},{"name":"inhibition of inorganic anion transmembrane transport","type":"narrow"},{"name":"inhibition of transmembrane inorganic anion transport","type":"narrow"},{"name":"negative regulation of inorganic anion membrane transport","type":"exact"},{"name":"negative regulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903796"}


id: GO:0006183
data:
  {"annotated_genes":["SJAG_01298","SJAG_02887","SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64652,75230,102598],"is_not":false,"summary":null,"term":"GO:0006183"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009206"},{"relation_name":"is_a","term_name":"GTP metabolic process","termid":"GO:0046039"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_02887":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GTP biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GTP anabolism","type":"exact"},{"name":"GTP biosynthesis","type":"exact"},{"name":"GTP formation","type":"exact"},{"name":"GTP synthesis","type":"exact"}],"termid":"GO:0006183","terms_by_termid":{"GO:0006183":null}}


id: MONDO:1011786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal weak calf syndrome, non-human animal","secondary_identifiers":["OMIA:001817"],"termid":"MONDO:1011786","xrefs":{"Monarch":{"xref_id":"1011786"}}}


id: GO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell in the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"ureter smooth muscle development","termid":"GO:0072191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}


id: PBO:0071146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 10","termid":"PBO:0071146"}


id: MONDO:0010752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"VACTERL/vater association","termid":"MONDO:0008642"},{"relation_name":"is_a","term_name":"VACTERL with hydrocephalus","termid":"MONDO:0010172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VACTERL association, X-linked, with or without hydrocephalus","secondary_identifiers":["OMIM:314390","MEDGEN:419019","DOID:0111766","UMLS:C2931228","GARD:15309"],"synonyms":[{"name":"VACTERL association with hydrocephaly, X-linked","type":"related"},{"name":"VACTERL association, X-linked, X-linked recessive","type":"exact"},{"name":"VACTERL association, X-linked, with or without hydrocephalus","type":"exact"},{"name":"VACTERL-H, X-linked","type":"related"},{"name":"VACTERLX","type":"related"},{"name":"X-linked VACTERL-H syndrome","type":"related"}],"termid":"MONDO:0010752","xrefs":{"Monarch":{"xref_id":"0010752"}}}


id: MONDO:0968987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed lipomatous, dysraphic malformation of the lower spinal cord characterized by extramedullary lipomatous mass attached to the conus region. The conus is dysplastic and poorly delineated. Various morphological subtypes are recognized. Possible symptoms include bowel and bladder dysfunction and neuro-orthopedic deformity of the lower limbs.","definition_xrefs":["Orphanet:645297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conus spinal cord lipoma","termid":"MONDO:0958350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"extramedullary conus spinal cord lipoma","secondary_identifiers":["MEDGEN:1853155","UMLS:C5816726"],"termid":"MONDO:0968987","xrefs":{"Monarch":{"xref_id":"0968987"}}}


id: MONDO:0004356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic neoplasm which arises from the kidney and occurs in children. It includes the cystic partially differentiated nephroblastoma and cases in which nephroblastomatous elements are not present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood kidney neoplasm","termid":"MONDO:0002730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"childhood multilocular cystic kidney neoplasm","secondary_identifiers":["MEDGEN:232064","UMLS:C1332983","NCIT:C6566","DOID:7762"],"synonyms":[{"name":"benign multilocular cystic renal tumor","type":"related"},{"name":"benign multilocular cystic renal tumour","type":"related"},{"name":"childhood multilocular cystic kidney neoplasm","type":"exact"},{"name":"childhood multilocular cystic kidney tumor","type":"exact"},{"name":"childhood multilocular cystic kidney tumour","type":"exact"},{"name":"childhood multilocular cystic renal neoplasm","type":"exact"},{"name":"childhood multilocular cystic renal tumor","type":"exact"},{"name":"childhood multilocular cystic renal tumour","type":"exact"},{"name":"paediatric multilocular cystic kidney neoplasm","type":"exact"},{"name":"paediatric multilocular cystic kidney tumour","type":"exact"},{"name":"paediatric multilocular cystic renal neoplasm","type":"exact"},{"name":"paediatric multilocular cystic renal tumour","type":"exact"},{"name":"pediatric multilocular cystic kidney neoplasm","type":"exact"},{"name":"pediatric multilocular cystic kidney tumor","type":"exact"},{"name":"pediatric multilocular cystic renal neoplasm","type":"exact"},{"name":"pediatric multilocular cystic renal tumor","type":"exact"}],"termid":"MONDO:0004356","xrefs":{"Monarch":{"xref_id":"0004356"}}}


id: PBO:0087621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COP9 signalosome (CSN) complex; this complex cleaves the ubiquitin-like protein Nedd8 from SCF ubiquitin ligases; plays a role in the mating pheromone response","termid":"PBO:0087621"}


id: GO:2000263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, extrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of blood coagulation, extrinsic pathway","termid":"GO:2000263"}


id: PBO:0034253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_parallelism_relationship_with","termid":"PBO:0034253"}


id: GO:0033509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including propionate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process to propionate","synonyms":[{"name":"glutamate breakdown to propionate","type":"exact"},{"name":"glutamate degradation to propionate","type":"exact"}],"termid":"GO:0033509"}


id: GO:0034964
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small RNA transcript into a mature box H/ACA RNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA metabolic process","termid":"GO:0033979"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA sRNA processing","type":"narrow"},{"name":"box H/ACA snoRNA processing","type":"narrow"}],"termid":"GO:0034964","terms_by_termid":{"GO:0000495":null}}


id: PBO:0030105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutamate_level","termid":"PBO:0030105"}


id: PBO:0065840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 5","termid":"PBO:0065840"}


id: MONDO:0007498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear exostoses","secondary_identifiers":["UMLS:C0155411","MEDGEN:56363","OMIM:128300"],"synonyms":[{"name":"ear exostoses","type":"exact"},{"name":"exostoses of external auditory canal","type":"related"}],"termid":"MONDO:0007498","xrefs":{"Monarch":{"xref_id":"0007498"}}}


id: PBO:0063260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 6","termid":"PBO:0063260"}


id: PBO:0003160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit E (predicted)","termid":"PBO:0003160"}


id: GO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ferredoxin, any simple, nonenzymatic iron-sulfur protein that is characterized by having equal numbers of atoms of iron and labile sulfur. Iron and sulfur atoms are present in one or two clusters of two or four atoms of each.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ferredoxin biosynthetic process (obsolete GO:0043172)","synonyms":[{"name":"ferredoxin anabolism","type":"exact"},{"name":"ferredoxin biosynthesis","type":"exact"},{"name":"ferredoxin formation","type":"exact"},{"name":"ferredoxin synthesis","type":"exact"}],"termid":"GO:0043172"}


id: PBO:0034243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_functional_equivalence_relationship_with","termid":"PBO:0034243"}


id: RO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s 'determined by part of' w if and only if there exists some f such that (1) s 'determined by' f and (2) f part_of w, or f=w.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determined_by_part_of","termid":"RO:0002509"}


id: PBO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family (predicted)","termid":"PBO:0004636"}


id: PATO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000698 floury (obsolete PATO:0000698)","termid":"PATO:0000698"}


id: GO:0009215
data:
  {"annotated_genes":["SJAG_04487","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[107629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside triphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"},{"relation_name":"is_a","term_name":"deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009215","terms_by_termid":{"GO:0009216":null,"GO:0035863":null}}


id: FYPO:0002428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores with elongated germ tubes and vegetative cells of normal size and shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with elongated germ tubes and cells with normal morphology (obsolete FYPO:0002428)","termid":"FYPO:0002428"}


id: GO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["GOC:jl","ISBN:0198600461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"},{"relation_name":"is_a","term_name":"alkanesulfonate biosynthetic process","termid":"GO:0046305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"taurine biosynthetic process","synonyms":[{"name":"taurine anabolism","type":"exact"},{"name":"taurine biosynthesis","type":"exact"},{"name":"taurine formation","type":"exact"},{"name":"taurine synthesis","type":"exact"}],"termid":"GO:0042412"}


id: MONDO:0018656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","termid":"MONDO:0011897"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"tremor-ataxia-central hypomyelination syndrome","secondary_identifiers":["GARD:17774","MEDGEN:1842823","UMLS:C5680067","Orphanet:447896"],"synonyms":[{"name":"TACH syndrome","type":"exact"}],"termid":"MONDO:0018656","xrefs":{"Monarch":{"xref_id":"0018656"}}}


id: PBO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_structure","termid":"PBO:0036010"}


id: GO:0051135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:12154375","PMID:9133426","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of NK T cell activation","termid":"GO:0051133"},{"relation_name":"positively_regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of NK T cell activation","synonyms":[{"name":"activation of NK T cell activation","type":"narrow"},{"name":"positive regulation of NK T lymphocyte activation","type":"exact"},{"name":"positive regulation of NK T-cell activation","type":"exact"},{"name":"positive regulation of NK T-lymphocyte activation","type":"exact"},{"name":"positive regulation of NKT cell activation","type":"exact"},{"name":"positive regulation of NT cell activation","type":"exact"},{"name":"positive regulation of natural T cell activation","type":"exact"},{"name":"positive regulation of natural killer T cell activation","type":"exact"},{"name":"stimulation of NK T cell activation","type":"narrow"},{"name":"up regulation of NK T cell activation","type":"exact"},{"name":"up-regulation of NK T cell activation","type":"exact"},{"name":"upregulation of NK T cell activation","type":"exact"}],"termid":"GO:0051135"}


id: GO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of an that at birth or hatching is fundamentally unlike its parent and must metamorphose before assuming the adult characters.","definition_xrefs":["GOC:jid","ISBN:0877795088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval development","termid":"GO:0002164"}


id: GO:0007358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Specification of the borders of central gap gene expression mediated largely by the effects of other gap genes; in insects this is exemplified by knirps repression of Kruppel.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of central gap gene boundaries (obsolete GO:0007358)","termid":"GO:0007358"}


id: MONDO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to milk (usually cow's milk) or milk products. milk hypersensitivity should be differentiated from lactose intolerance, an intolerance to milk as a result of congenital deficiency of lactase.","definition_xrefs":["MESH:D016269"],"gene_count":0,"genotype_count":0,"name":"obsolete milk allergic reaction (obsolete MONDO:0005849)","secondary_identifiers":["DOID:4376"],"synonyms":[{"name":"milk allergic reaction","type":"exact"},{"name":"milk allergy","type":"related"}],"termid":"MONDO:0005849","xrefs":{"Monarch":{"xref_id":"0005849"}}}


id: FYPO:0002406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, contains one or more septa, and is curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"viable curved stubby vegetative cell","termid":"FYPO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"viable curved stubby septated vegetative cell","synonyms":[{"name":"curved stubby septated viable cell","type":"exact"},{"name":"viable curved stubby septated cell during vegetative growth","type":"exact"},{"name":"viable curved stubby septated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable curved watermelon-shaped septated vegetative cell","type":"exact"}],"termid":"FYPO:0002406"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: PBO:0078150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 28 (pseudogene)","termid":"PBO:0078150"}


id: PBO:0067519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 660, pseudogene","termid":"PBO:0067519"}


id: PBO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.13.-","termid":"PBO:0004706"}


id: GO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor-2 (VEGFR-2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:uh","Wikipedia:Kinase_insert_domain_receptor","PMID:12967471","Wikipedia:VEGF_receptors"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor-2 signaling pathway","synonyms":[{"name":"FLK-1 signaling pathway","type":"exact"},{"name":"KDR signaling pathway","type":"exact"},{"name":"VEGFR-2 signaling pathway","type":"exact"},{"name":"VEGFR2 signaling pathway","type":"exact"}],"termid":"GO:0036324"}


id: FYPO:0006797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of cell separation after cytokinesis","synonyms":[{"name":"delayed cell separation after cytokinesis","type":"exact"},{"name":"delayed onset of cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"delayed onset of mitotic cytokinetic cell separation","type":"exact"},{"name":"delayed onset of septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0006797"}


id: FYPO:0003714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003714"}


id: PBO:0084271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; required for asymmetric localization of Kar9p during mitosis; GFP-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0084271"}


id: MONDO:0009582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mietens syndrome is a very rare syndrome consisting of corneal opacity, nystagmus, strabismus, flexion contracture of the elbows with dislocation of the head of the radius and abnormally short ulnae and radii.","definition_xrefs":["Orphanet:2557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mietens syndrome","secondary_identifiers":["ICD9:759.89","OMIM:249600","icd11.foundation:1399358623","MESH:C537444","GARD:3524","SCTID:40291001","UMLS:C0265249","MEDGEN:82695"],"synonyms":[{"name":"Mietens-Weber syndrome","type":"related"},{"name":"corneal opacity, nystagmus, flexion contracture of the elbows, growth failure, and intellectual disability","type":"related"},{"name":"corneal opacity, nystagmus, flexion contracture of the elbows, growth failure, and mental retardation","type":"related"},{"name":"intellectual disability syndrome, Mietens Weber type","type":"related"},{"name":"intellectual disability syndrome, Mietens-WEBER type","type":"related"},{"name":"intellectual disability, Mietens-Weber type","type":"exact"},{"name":"mental retardation syndrome, Mietens Weber type","type":"related"},{"name":"mental retardation syndrome, Mietens-WEBER type","type":"related"}],"termid":"MONDO:0009582","xrefs":{"Monarch":{"xref_id":"0009582"}}}


id: SO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with nickel ions.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nickel_ion_contact_site","secondary_identifiers":["BS:00142"],"synonyms":[{"name":"Ni_contact_site","type":"exact"},{"name":"polypeptide nickel ion contact site","type":"exact"}],"termid":"SO:0001101"}


id: MONDO:0016127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"bacterial myositis","secondary_identifiers":["MEDGEN:538237","Orphanet:206994","GARD:20378","SCTID:30330001","UMLS:C0263979","icd11.foundation:1277815767"],"termid":"MONDO:0016127","xrefs":{"Monarch":{"xref_id":"0016127"}}}


id: PBO:0039357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenin X-linked","termid":"PBO:0039357"}


id: PBO:0041421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 33","termid":"PBO:0041421"}


id: GO:0050603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + O2 + thiophene-2-carbonyl-CoA = 5-hydroxythiophene-2-carbonyl-CoA + A + H2O + H+.","definition_xrefs":["EC:1.14.99.35","RHEA:18929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiophene-2-carbonyl-CoA monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05742","MetaCyc:1.14.99.35-RXN","UM-BBD_reactionID:r1235"],"synonyms":[{"name":"thiophene-2-carbonyl-CoA, hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"thiophene-2-carboxyl-CoA dehydrogenase activity","type":"related"},{"name":"thiophene-2-carboxyl-CoA hydroxylase activity","type":"related"},{"name":"thiophene-2-carboxyl-CoA monooxygenase activity","type":"related"}],"termid":"GO:0050603"}


id: PBO:0014602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase (predicted)","termid":"PBO:0014602"}


id: PBO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHDC7B divergent transcript","termid":"PBO:0052481"}


id: PBO:0039613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2","termid":"PBO:0039613"}


id: PBO:0086822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL011C is not an essential gene","termid":"PBO:0086822"}


id: PBO:0086405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ferric reductase with similarity to Fre2p; expression induced by low iron levels; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086405"}


id: MONDO:1011412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methemoglobinemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methemoglobinemia, non-human animal","secondary_identifiers":["OMIA:001171"],"termid":"MONDO:1011412","xrefs":{"Monarch":{"xref_id":"1011412"}}}


id: PBO:0039120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 3","termid":"PBO:0039120"}


id: GO:0106326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + H+ + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-threonyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0106326)","termid":"GO:0106326"}


id: PBO:0061405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide S","termid":"PBO:0061405"}


id: PR:O42896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC115.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C115.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC115.03","synonyms":[{"name":"Spom972h-SPBC115.03","type":"exact"}],"termid":"PR:O42896"}


id: GO:0050585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylpyruvate + O2 = 4-hydroxymandelate + CO2.","definition_xrefs":["MetaCyc:1.13.11.46-RXN","EC:1.13.11.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxymandelate synthase activity","secondary_identifiers":["Reactome:R-HSA-9856718","RHEA:21376"],"synonyms":[{"name":"4-hydroxyphenylpyruvate dioxygenase II activity","type":"narrow"},{"name":"4-hydroxyphenylpyruvate:oxygen oxidoreductase (decarboxylating)","type":"broad"}],"termid":"GO:0050585"}


id: PBO:0089444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent alpha-hydroxy acid dehydrogenase","termid":"PBO:0089444"}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: MONDO:0017060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iniencephaly","termid":"MONDO:0018968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"open iniencephaly","secondary_identifiers":["MEDGEN:608900","SCTID:203928008","Orphanet:268363","icd11.foundation:1778329323","GARD:20949","UMLS:C0431285"],"termid":"MONDO:0017060","xrefs":{"Monarch":{"xref_id":"0017060"}}}


id: GO:0019417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting the addition of oxygen to elemental sulfur.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfur oxidation","synonyms":[{"name":"sulphur oxidation","type":"exact"}],"termid":"GO:0019417"}


id: PBO:0014613
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Schizosaccharomyces","termid":"PBO:0014613"}


id: MONDO:0009584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability, Buenos-Aires type is a rare intellectual disability syndrome characterized by growth retardation, microcephaly, characteristic facial features (including narrow forehead, bushy eyebrows, hypertelorism, small, downward-slanting palpebral fissures with blepharoptosis, malformed and low-set ears, broad straight nose, thin upper lip, and a wide, tented mouth), developmental delay, intellectual disability, speech disorder, and multiple organ malformations (e.g. ventricular septal defect, megaloureter, dilated renal pelvis). Additional manifestations reported include neurocutaneous lesions (including palmoplantar hyperkeratosis), internal hydrocephalus, and bilateral partial soft-tissue syndactyly of second and third toe.","definition_xrefs":["Orphanet:3079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability, Buenos-Aires type","secondary_identifiers":["MEDGEN:167102","OMIM:249630","SCTID:725906006","GARD:3485","MESH:C563095","UMLS:C0796080"],"synonyms":[{"name":"Mutchinick syndrome","type":"exact"},{"name":"intellectual deficit Buenos-Aires type","type":"related"},{"name":"intellectual disability Buenos Aires type","type":"related"},{"name":"intellectual disability, Buenos Aires type","type":"related"},{"name":"mental retardation Buenos Aires type","type":"related"},{"name":"mental retardation, Buenos Aires type","type":"related"}],"termid":"MONDO:0009584","xrefs":{"Monarch":{"xref_id":"0009584"}}}


id: PBO:0013467
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of FLocculation","termid":"PBO:0013467"}


id: GO:0015797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mannitol across a membrane. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mannitol transmembrane transport","synonyms":[{"name":"mannitol transport","type":"broad"}],"termid":"GO:0015797"}


id: GO:0048715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oligodendrocyte differentiation.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell differentiation","termid":"GO:0045686"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte differentiation","termid":"GO:0048713"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte differentiation","synonyms":[{"name":"down regulation of oligodendrocyte differentiation","type":"exact"},{"name":"down-regulation of oligodendrocyte differentiation","type":"exact"},{"name":"downregulation of oligodendrocyte differentiation","type":"exact"},{"name":"inhibition of oligodendrocyte differentiation","type":"narrow"}],"termid":"GO:0048715"}


id: PBO:0050194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 11","termid":"PBO:0050194"}


id: MONDO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sideroblastic anemia with spinocerebellar ataxia (obsolete MONDO:0000609)","termid":"MONDO:0000609","xrefs":{"Monarch":{"xref_id":"0000609"}}}


id: MONDO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, benign, usually self-limited viral infection of the skin and occasionally the conjunctivae by a poxvirus (molluscum contagiosum virus). (Dorland, 27th ed)","definition_xrefs":["MESH:D008976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molluscum contagiosum","secondary_identifiers":["DOID:8867","SCTID:40070004","icd11.foundation:82201615","ICD9:078.0","EFO:0007375","ICD10CM:B08.1","UMLS:C0026393","MEDGEN:10081"],"termid":"MONDO:0005855","xrefs":{"Monarch":{"xref_id":"0005855"}}}


id: GO:0030075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid that is derived from and attached to, but not necessarily continuous with, the plasma membrane, and is not enclosed in a plastid. It bears the photosynthetic pigments in photosynthetic cyanobacteria.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial thylakoid","synonyms":[{"name":"plasma membrane-derived thylakoid","type":"exact"}],"termid":"GO:0030075"}


id: GO:0043353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specialized features of an erythrocyte without a nucleus. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte differentiation","synonyms":[{"name":"enucleate RBC differentiation","type":"exact"},{"name":"enucleate red blood cell differentiation","type":"exact"}],"termid":"GO:0043353"}


id: PBO:0004145
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during nucleotide depletion","termid":"PBO:0004145"}


id: MONDO:0004863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"purulent endophthalmitis","secondary_identifiers":["ICD9:360.0","SCTID:41720003","ICD9:360.00","MEDGEN:537163","UMLS:C0259800","ICD10CM:H44.0","icd11.foundation:830703931","DOID:9724"],"termid":"MONDO:0004863","xrefs":{"Monarch":{"xref_id":"0004863"}}}


id: PBO:0113291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted RNA helicase of the DEAH-box family; the authentic, non-tagged protein is detected in highly purified mitochondria in HTP studies and sediments with the 40S ribosomal subunit; crosslinks with 18S rRNA; non-essential gene; contains a ubiquitin-associated domain, an RWD domain, a helicase ATP-binding DEAD-like domain, a helicase C terminal domain and a helicase associated domain; does not contain a Rb-like A/B pocket structure; homolog of mammalian translation initiation factor DHX29","termid":"PBO:0113291"}


id: PBO:0052245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 14","termid":"PBO:0052245"}


id: PBO:0051072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-24 (non-functional)","termid":"PBO:0051072"}


id: PBO:0111756
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRRAP family protein","termid":"PBO:0111756"}


id: PR:Q10195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.06c gene.","definition_xrefs":["UniProtKB:Q10195","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.06c","synonyms":[{"name":"Spom972h-SPBC11C11.06c","type":"exact"}],"termid":"PR:Q10195"}


id: PBO:0039951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 2 pseudogene 1","termid":"PBO:0039951"}


id: MONDO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human HOXA1 syndromes is characterized by deafness, central hypoventilation, congenital ocular paralysis and developmental retardation. Cardiac anomalies and paralysis of the vocal chords may also be present. Six cases have been reported so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:69739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"human HOXA1 syndromes","secondary_identifiers":["SCTID:720518006","UMLS:C1832215","MEDGEN:330410","OMIM:601536","GARD:8333","DOID:0050682"],"synonyms":[{"name":"ABDS","type":"related"},{"name":"ABSD","type":"exact"},{"name":"Athabascan brainstem dysgenesis syndrome","type":"exact"},{"name":"Athabaskan brainstem dysgenesis","type":"related"},{"name":"Athabaskan brainstem dysgenesis syndrome","type":"exact"},{"name":"BSAS","type":"related"},{"name":"Bosley Salih Alorainy syndrome","type":"related"},{"name":"Bosley-Salih-Alorainy syndrome","type":"related"},{"name":"Human HOXA1 syndromes","type":"related"},{"name":"Navajo brainstem syndrome","type":"exact"}],"termid":"MONDO:0011099","xrefs":{"Monarch":{"xref_id":"0011099"}}}


id: SO:1000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When no simple or well defined DNA mutation event describes the observed DNA change, the keyword \\\"complex\\\" should be used. Usually there are multiple equally plausible explanations for the change.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_substitution","synonyms":[{"name":"complex substitution","type":"exact"}],"termid":"SO:1000005"}


id: PBO:0055450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2882","termid":"PBO:0055450"}


id: GO:0097578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining copper ions such that they are separated from other components of a biological system.","definition_xrefs":["PMID:3099306","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of copper ion (obsolete GO:0097578)","synonyms":[{"name":"copper ion retention","type":"exact"},{"name":"copper ion sequestering","type":"exact"},{"name":"copper ion sequestration","type":"exact"},{"name":"copper ion storage","type":"exact"},{"name":"retention of copper ion","type":"exact"},{"name":"sequestration of copper ion","type":"exact"},{"name":"storage of copper ion","type":"exact"}],"termid":"GO:0097578"}


id: GO:0015763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of N-acetylgalactosamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. N-acetylgalactosamine, 2-acetamido-2-deoxygalactopyranose, is the n-acetyl derivative of galactosamine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"N-acetylgalactosamine transport","termid":"GO:0015763"}


id: PBO:0068109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 416","termid":"PBO:0068109"}


id: PBO:0070393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor A","termid":"PBO:0070393"}


id: PBO:0108539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 202","termid":"PBO:0108539"}


id: GO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell rough endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum membrane","termid":"GO:0044167"},{"relation_name":"part_of","term_name":"host cell rough endoplasmic reticulum","termid":"GO:0044168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum membrane","synonyms":[{"name":"host rough endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0044169"}


id: PBO:0065512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-serine-threonine phosphatase interacting protein 2","termid":"PBO:0065512"}


id: PBO:0081090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 20","termid":"PBO:0081090"}


id: FYPO:0000061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"multinucleate","termid":"FYPO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"multinucleate vegetative cell","synonyms":[{"name":"multinucleate cells during vegetative growth","type":"exact"},{"name":"multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"multiple nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0000061"}


id: PBO:0030612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_galactomannan_level","termid":"PBO:0030612"}


id: PBO:0088863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2","termid":"PBO:0088863"}


id: GO:0043396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticotropin-releasing hormone (CRH), a polypeptide hormone involved in the stress response. CRH is produced by the hypothalamus and stimulates corticotropic cells of the anterior lobe of the pituitary to produce corticotropic hormone (CTH) and other biologically active substances e.g. 2-endorphin, release of CRH is affected by serum levels of cortisol, by stress and by the sleep/wake cycle.","definition_xrefs":["GOC:go_curators","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"corticotropin-releasing hormone secretion","synonyms":[{"name":"CRF secretion","type":"exact"},{"name":"CRH secretion","type":"exact"},{"name":"corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0043396"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["EC:5.4.2.9","RHEA:17013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN","KEGG_REACTION:R00661"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: PR:O13848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19G12.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADP-dependent indole-3-acetaldehyde reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.09","synonyms":[{"name":"AKR3C2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC19G12.09","type":"exact"}],"termid":"PR:O13848"}


id: MONDO:0020160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary entropion (obsolete MONDO:0020160)","secondary_identifiers":["Orphanet:98569"],"termid":"MONDO:0020160","xrefs":{"Monarch":{"xref_id":"0020160"}}}


id: FYPO:0006104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of retrotransposon integration is decreased.","definition_xrefs":["PomBase:mah","PMID:26358720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased retrotransposon integration","synonyms":[{"name":"decreased retrotransposon integration during mitotic cell cycle","type":"related"},{"name":"decreased retrotransposon integration during vegetative growth","type":"exact"},{"name":"decreased transposon integration involved in RNA-mediated transposition","type":"exact"},{"name":"reduced retrotransposon integration","type":"exact"}],"termid":"FYPO:0006104"}


id: PBO:0042767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 68","termid":"PBO:0042767"}


id: PR:Q92366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12884:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.01","secondary_identifiers":["UniProtKB:Q92366"],"synonyms":[{"name":"L43 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC776.01","type":"related"},{"name":"Spom972h-RPL29","type":"exact"}],"termid":"PR:Q92366"}


id: PR:Q1K9B6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9B6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.02c","synonyms":[{"name":"Spom972h-pex22","type":"exact"}],"termid":"PR:Q1K9B6"}


id: PBO:0055523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2957","termid":"PBO:0055523"}


id: PBO:0090880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cruciform-cutting endonuclease Cce1","termid":"PBO:0090880"}


id: GO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme morphogenesis","termid":"GO:0072132"}


id: PBO:0003601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type I ribosomal protein arginine N-methyltransferase Rmt3","termid":"PBO:0003601"}


id: PBO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2","termid":"PBO:0060936"}


id: GO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + malate + CoA = ADP + phosphate + malyl-CoA.","definition_xrefs":["EC:6.2.1.9","MetaCyc:MALATE--COA-LIGASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"malate-CoA ligase activity","secondary_identifiers":["RHEA:26193"],"synonyms":[{"name":"malate thiokinase activity","type":"related"},{"name":"malate:CoA ligase (ADP-forming)","type":"related"},{"name":"malyl coenzyme A synthetase activity","type":"related"},{"name":"malyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050074"}


id: PBO:0110475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETFRF1 pseudogene 1","termid":"PBO:0110475"}


id: SO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting one base backward.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_frameshift_variant","synonyms":[{"name":"+1 frameshift variant","type":"exact"},{"name":"plus 1 frameshift variant","type":"exact"}],"termid":"SO:0001594"}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["PMID:26124291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: GO:0050749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with an apolipoprotein E receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor binding (obsolete GO:0050749)","synonyms":[{"name":"apolipoprotein E receptor binding","type":"exact"}],"termid":"GO:0050749"}


id: GO:0015900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of benomyl into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Benomyl, methyl 1-(butylcarbamoyl)-2-benzimidazolecarbamate, is a systemic agricultural fungicide used for control of certain fungal diseases of stone fruit.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transport (obsolete GO:0015900)","termid":"GO:0015900"}


id: GO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the correct R8 cell spacing pattern in a compound eye.","definition_xrefs":["GOC:tb","PMID:11880339","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell spacing in compound eye","termid":"GO:0045468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell spacing in compound eye","synonyms":[{"name":"down regulation of R8 spacing","type":"exact"},{"name":"down-regulation of R8 spacing","type":"exact"},{"name":"downregulation of R8 spacing","type":"exact"},{"name":"inhibition of R8 spacing","type":"narrow"}],"termid":"GO:0045469"}


id: PBO:0081933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1C","termid":"PBO:0081933"}


id: PBO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease (predicted)","termid":"PBO:0000643"}


id: SO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL4 RNA leader sequence to the 5' end of an mRNA. SL4 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL4_acceptor_site","synonyms":[{"name":"SL4 acceptor site","type":"exact"}],"termid":"SO:0001749"}


id: PBO:0002865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR56 (predicted)","termid":"PBO:0002865"}


id: PBO:0045900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor, selenocysteine-tRNA specific","termid":"PBO:0045900"}


id: PBO:0001444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate adaptor for cullin 3 ubiquitin ligase Btb3","termid":"PBO:0001444"}


id: GO:0007612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience.","definition_xrefs":["ISBN:0721662544","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learning","secondary_identifiers":["Wikipedia:Learning"],"termid":"GO:0007612"}


id: GO:1990765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry of the large intestine, exclusive of the rectum. The colon is that part of the large intestine that connects the small intestine to the rectum.","definition_xrefs":["PMID:24170253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"part_of","term_name":"intestine smooth muscle contraction","termid":"GO:0014827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon smooth muscle contraction","termid":"GO:1990765"}


id: PBO:0063606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4","termid":"PBO:0063606"}


id: MONDO:0008664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant neovascular inflammatory vitreoretinopathy (obsolete MONDO:0008664)","termid":"MONDO:0008664","xrefs":{"Monarch":{"xref_id":"0008664"}}}


id: MONDO:0011157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome, which may be classified among the neurocutaneous syndromes, associates abnormalities of the cerebellum (rhombencephalosynapsis), cranial nerves (trigeminal anesthesia), and scalp (alopecia). It has been reported in 11 individuals so far. Other features observed in patients were craniosynostosis, midfacial hypoplasia, bilateral corneal opacities, low-set ears, short stature, moderate intellectual impairment and ataxia. Hyperactivity, depression, self-injurious behavior and bipolar disorder have also been reported.","definition_xrefs":["Orphanet:1532"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Gomez-Lopez-Hernandez syndrome","secondary_identifiers":["OMIM:601853","MEDGEN:163201","MESH:C537285","GARD:229","SCTID:722451006","UMLS:C0795959"],"synonyms":[{"name":"Cerebellotrigeminal dermal dysplasia","type":"related"},{"name":"Cerebellotrigeminal dermal dysplasia cerebello-trigeminal-dermal dysplasia","type":"related"},{"name":"Cerebellotrigeminal-dermal dysplasia","type":"related"},{"name":"Cerebellotrigeminal-dermal dysplasia syndrome","type":"exact"},{"name":"GLHS","type":"related"},{"name":"GOMEZ-LOPEZ-HERNANDEZ syndrome","type":"related"},{"name":"Gomez Lopez Hernandez syndrome","type":"related"},{"name":"Gomez-Lopez-Hernandez syndrome","type":"exact"},{"name":"Gomez-Lopez-Hernández syndrome","type":"related"},{"name":"Gómez-López-Hernández syndrome","type":"related"},{"name":"craniosynostosis-alopecia-brain defect syndrome","type":"exact"}],"termid":"MONDO:0011157","xrefs":{"Monarch":{"xref_id":"0011157"}}}


id: PBO:0054072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1422","termid":"PBO:0054072"}


id: PBO:0003966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Spt8","termid":"PBO:0003966"}


id: MONDO:0017766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of mineral absorption and transport","termid":"MONDO:0017761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of manganese transport","secondary_identifiers":["Orphanet:309851","UMLS:C5681032","MEDGEN:1843191","GARD:21358"],"termid":"MONDO:0017766","xrefs":{"Monarch":{"xref_id":"0017766"}}}


id: PBO:0063668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins 6","termid":"PBO:0063668"}


id: GO:0035522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.","definition_xrefs":["GOC:bf","PMID:18226187","PMID:20436459"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone H2A deubiquitination (obsolete GO:0035522)","synonyms":[{"name":"monoubiquitinated histone H2A deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone H2A deubiquitylation","type":"exact"}],"termid":"GO:0035522"}


id: PBO:0108777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0108777"}


id: MONDO:1010727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukocyte adhesion deficiency that occurs in dogs due to a mutation in the ITGB2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency, non-human animal","termid":"MONDO:1012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte adhesion deficiency, ITGB2-related, dog","secondary_identifiers":["OMIA:000595-9615"],"synonyms":[{"name":"leukocyte adhesion deficiency type I, dog","type":"related"}],"termid":"MONDO:1010727","xrefs":{"Monarch":{"xref_id":"1010727"}}}


id: GO:2000851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of corticosteroid hormone secretion","termid":"GO:2000848"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"positively_regulates","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"}


id: SO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyl_3_3_amino_3_carboxypropyl_pseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyl_three_three_amino_three_carboxypropyl_pseudouridine","secondary_identifiers":["RNAMOD:086"],"synonyms":[{"name":"1-methyl-3-(3-amino-3-carboxypropyl) pseudouridine","type":"exact"},{"name":"m1acp3Y","type":"exact"}],"termid":"SO:0001373"}


id: MONDO:0019981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral multicystic dysplastic kidney is the form of multicystic dysplastic kidney (MCDK), a congenital anomaly of the kidney and urinary tract (CAKUT), in which one kidney is large, distended by multiple cysts, and non-functional.","definition_xrefs":["Orphanet:97363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicystic dysplastic kidney","termid":"MONDO:0015988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"unilateral multicystic dysplastic kidney","secondary_identifiers":["GARD:19375","MEDGEN:292613","UMLS:C1567426"],"synonyms":[{"name":"unilateral MCDK","type":"exact"},{"name":"unilateral multicystic renal dysplasia","type":"exact"}],"termid":"MONDO:0019981","xrefs":{"Monarch":{"xref_id":"0019981"}}}


id: MONDO:0015204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microlissencephaly describes a heterogenous group of a rare cortical malformations characterized by lissencephaly in combination with severe congenital microcephaly, presenting with spasticity, severe developmental delay, and seizures and with survival varying from days to years.","definition_xrefs":["Orphanet:1083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microlissencephaly","secondary_identifiers":["DOID:0112234","GARD:16555","MEDGEN:365439","icd11.foundation:169315445","UMLS:C1956147"],"termid":"MONDO:0015204","xrefs":{"Monarch":{"xref_id":"0015204"}}}


id: PBO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit H","termid":"PBO:0046057"}


id: PBO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 13","termid":"PBO:0071649"}


id: PBO:0065171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin 1","termid":"PBO:0065171"}


id: PBO:0077381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 121B","termid":"PBO:0077381"}


id: GO:0048487
data:
  {"annotated_genes":["SJAG_02270","SJAG_04074"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67467,77116],"is_not":false,"summary":null,"term":"GO:0048487"}]},"cv_name":"molecular_function","definition":"Binding to the microtubule constituent protein beta-tubulin.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulin binding","termid":"GO:0015631"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02270":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"beta-tubulin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"beta tubulin binding","type":"exact"}],"termid":"GO:0048487","terms_by_termid":{"GO:0048487":null}}


id: MONDO:1011017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar degeneration that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration, non-human animal","termid":"MONDO:1010243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration, domestic cat","secondary_identifiers":["OMIA:001221-9685"],"termid":"MONDO:1011017","xrefs":{"Monarch":{"xref_id":"1011017"}}}


id: PBO:0017506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms2 (predicted)","termid":"PBO:0017506"}


id: GO:0038157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cytokine granulocyte macrophage colony-stimulating factor (GM-CSF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. GM-CSF binds to a heterodimer receptor (CSF2R) consisting of an alpha ligand-binding subunit, and a common beta subunit that is shared with other cytokine receptors.","definition_xrefs":["GOC:signaling","GOC:nhn","PMID:17027509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"granulocyte-macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"CSF2 signaling pathway","type":"exact"},{"name":"GM-CSF receptor signaling pathway","type":"exact"},{"name":"GM-CSF signaling pathway","type":"exact"},{"name":"granulocyte-macrophage colony-stimulating factor receptor signaling pathway","type":"exact"},{"name":"granulocyte-macrophage colony-stimulating factor signalling pathway","type":"related"}],"termid":"GO:0038157"}


id: PBO:0053838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1103","termid":"PBO:0053838"}


id: PBO:0082529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall glycoprotein involved in beta-glucan assembly; serves as a K1 killer toxin membrane receptor","termid":"PBO:0082529"}


id: GO:0047473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent activation of D-alanine and its transfer as a thiol ester to the phosphopantheinyl prosthetic group of a D-alanyl carrier protein, according to the reaction: ATP + D-alanine + a [D-alaninyl carrier protein] = a D-alanyl-[D-alanyl carrier protein] + AMP + diphosphate.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"D-alanine [D-alanyl carrier protein] ligase activity","synonyms":[{"name":"D-alanine-D-alanyl carrier protein ligase activity","type":"related"},{"name":"D-alanine-activating enzyme activity","type":"related"},{"name":"D-alanine-poly(phosphoribitol) ligase activity","type":"broad"},{"name":"D-alanine:poly(phosphoribitol) ligase (AMP-forming)","type":"broad"}],"termid":"GO:0047473"}


id: GO:0055026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle tissue development","termid":"GO:0045843"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue development","termid":"GO:0055024"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue development","synonyms":[{"name":"down regulation of cardiac muscle development","type":"exact"},{"name":"down-regulation of cardiac muscle development","type":"exact"},{"name":"downregulation of cardiac muscle development","type":"exact"},{"name":"inhibition of cardiac muscle development","type":"narrow"},{"name":"negative regulation of heart muscle development","type":"exact"}],"termid":"GO:0055026"}


id: GO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.","definition_xrefs":["GOC:mah","PMID:17525341","PMID:15556404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"K63-linked polyubiquitin modification-dependent protein binding","termid":"GO:0070530"}


id: PBO:0069017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 261, pseudogene","termid":"PBO:0069017"}


id: PBO:0073806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 12","termid":"PBO:0073806"}


id: GO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075080)","termid":"GO:0075080"}


id: PBO:0116196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yippee-like protein, Moh1","termid":"PBO:0116196"}


id: FYPO:0002941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell","synonyms":[{"name":"enlarged spheroid cell","type":"related"},{"name":"enlarged volume spheroid cell","type":"exact"},{"name":"large spheroid cell","type":"related"},{"name":"spheroid cell with increased cell size","type":"related"},{"name":"spheroid cell with increased cell volume","type":"exact"},{"name":"swollen rounded cell","type":"exact"}],"termid":"FYPO:0002941"}


id: PBO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 52","termid":"PBO:0061392"}


id: GO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4'-(2-hydroxyisopropyl)phenylurea + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + carbamic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4'-(2-hydroxyisopropyl)phenylurea amidohydrolase activity (obsolete GO:0034571)","termid":"GO:0034571"}


id: GO:1990575
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108282],"is_not":false,"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The process in which L-ornithine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:9237680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial L-ornithine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000066"],"synonyms":[{"name":"mitochondrial ornithine transmembrane transport","type":"broad"},{"name":"mitochondrial ornithine transport","type":"related"}],"termid":"GO:1990575","terms_by_termid":{"GO:1990575":null}}


id: PBO:0080650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDTC1 divergent transcript","termid":"PBO:0080650"}


id: GO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a NAD(P)+ to NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","secondary_identifiers":["EC:1.20.1.-"],"termid":"GO:0050499"}


id: PBO:0073812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A14 pseudogene 3","termid":"PBO:0073812"}


id: PBO:0057271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 495","termid":"PBO:0057271"}


id: PBO:0084322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and import of histones H3 and H4; localizes to the nuclear pore, nucleus, and cytoplasm; exhibits genetic interactions with RAI1","termid":"PBO:0084322"}


id: FYPO:0004770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular glutamine level","termid":"FYPO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar glutamine level","synonyms":[{"name":"increased level of glutamine in vacuole","type":"exact"},{"name":"increased vacuolar L-glutamine level","type":"exact"},{"name":"increased vacuolar glutamine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glutamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004770"}


id: GO:0009676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + H+(out) = sulfate(in) + H+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mah","PMID:7568135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate:proton symporter activity","termid":"GO:0008512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"low-affinity sulfate:proton symporter activity","synonyms":[{"name":"low affinity sulfate:hydrogen symporter activity","type":"exact"},{"name":"low affinity sulfate:proton symporter activity","type":"exact"},{"name":"low affinity sulphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009676"}


id: FYPO:0007627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype which the occurrence of an RNA catabolic process is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA catabolic process during glucose starvation","synonyms":[{"name":"decreased RNA breakdown process during glucose starvation","type":"exact"},{"name":"decreased RNA catabolic process during glucose depletion","type":"exact"},{"name":"decreased RNA catabolic process during glucose deprivation","type":"exact"},{"name":"decreased RNA catabolic process during glucose limitation","type":"exact"},{"name":"decreased RNA catabolism during glucose starvation","type":"exact"},{"name":"decreased RNA degradation during glucose starvation","type":"exact"},{"name":"reduced RNA catabolic process during glucose starvation","type":"exact"}],"termid":"FYPO:0007627"}


id: PBO:0048108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 1","termid":"PBO:0048108"}


id: GO:1901835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deadenylation-independent decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:1901834"},{"relation_name":"positively_regulates","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"activation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"activation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"narrow"},{"name":"activation of deadenylylation-independent decapping","type":"exact"},{"name":"positive regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"positive regulation of deadenylylation-independent decapping","type":"exact"},{"name":"up regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"up regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"up regulation of deadenylylation-independent decapping","type":"exact"},{"name":"up-regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"up-regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"up-regulation of deadenylylation-independent decapping","type":"exact"},{"name":"upregulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"upregulation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"upregulation of deadenylylation-independent decapping","type":"exact"}],"termid":"GO:1901835"}


id: GO:0019181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a halohydrin = an epoxide + a hydrogen halide.","definition_xrefs":["PMID:8017917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"halohydrin hydrogen-halide-lyase activity","termid":"GO:0019181"}


id: PBO:0076820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 4A","termid":"PBO:0076820"}


id: PBO:0079982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 20","termid":"PBO:0079982"}


id: PBO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (Indian blood group)","termid":"PBO:0042322"}


id: PBO:0071937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 14","termid":"PBO:0071937"}


id: PBO:0083058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate reductase involved in tetrahydrofolate biosynthesis; required for respiratory metabolism; mutation is functionally complemented by human DHFR","termid":"PBO:0083058"}


id: GO:0043890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 6-sulfate groups of the N-acetyl-D-galactosamine 6-sulfate units of chondroitin sulfate and of the D-galactose 6-sulfate units of keratan sulfate.","definition_xrefs":["EC:3.1.6.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-2263490","MetaCyc:3.1.6.4-RXN","Reactome:R-HSA-1630304"],"synonyms":[{"name":"N-acetyl-D-galactosamine-6-sulfate 6-sulfohydrolase activity","type":"exact"},{"name":"N-acetylgalactosamine 6-sulfatase activity","type":"exact"},{"name":"N-acetylgalactosamine-6-sulfate sulfatase activity","type":"exact"},{"name":"acetylgalactosamine 6-sulfatase activity","type":"exact"},{"name":"chondroitin sulfatase","type":"broad"},{"name":"chondroitinase","type":"broad"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"galactose-6-sulfate sulfatase activity","type":"exact"}],"termid":"GO:0043890"}


id: GO:0140453
data:
  {"annotated_genes":["SJAG_04055","SJAG_02381","SJAG_01186","SJAG_03164","SJAG_01664","SJAG_03794","SJAG_01529","SJAG_04187","SJAG_00436","SJAG_04666","SJAG_04567","SJAG_02013","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91167,92776,95399,96889,101071,104568,105367,110384,110385,115888,115889,117110,118973],"is_not":false,"summary":null,"term":"GO:0140453"}]},"cv_name":"cellular_component","definition":"Reversible aggregate of misfolded proteins and chaperones formed to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01529":null,"SJAG_01664":null,"SJAG_02013":null,"SJAG_02381":null,"SJAG_03164":null,"SJAG_03794":null,"SJAG_03815":null,"SJAG_04055":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"protein aggregate center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAC","type":"broad"},{"name":"protein aggregate centre","type":"exact"}],"termid":"GO:0140453","terms_by_termid":{"GO:0140453":null}}


id: PBO:0077120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane domain containing 1","termid":"PBO:0077120"}


id: PR:O60135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcf1 gene.","definition_xrefs":["UniProtKB:O60135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.02","synonyms":[{"name":"Spom972h-lcf1","type":"exact"},{"name":"fatty acid activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60135"}


id: MONDO:1012469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pentalogy of Fallot, non-human animal","termid":"MONDO:1011650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, dog","secondary_identifiers":["OMIA:001857-9615"],"termid":"MONDO:1012469","xrefs":{"Monarch":{"xref_id":"1012469"}}}


id: MONDO:0030503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 7, with or without hearing loss","secondary_identifiers":["UMLS:C5562043","MEDGEN:1794253","OMIM:619658"],"synonyms":[{"name":"PFIC7","type":"exact"}],"termid":"MONDO:0030503","xrefs":{"Monarch":{"xref_id":"0030503"}}}


id: RO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetically_interacts_with","termid":"RO:0002435"}


id: GO:0019522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ketogluconate metabolic process","secondary_identifiers":["MetaCyc:KETOGLUCONMET-PWY"],"synonyms":[{"name":"ketogluconate metabolism","type":"exact"}],"termid":"GO:0019522"}


id: PBO:0039173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 5","termid":"PBO:0039173"}


id: PBO:0043182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 2","termid":"PBO:0043182"}


id: PBO:0074660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 49","termid":"PBO:0074660"}


id: GO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with phosphatidylinositol 3-kinase (PI3K) activation, production of phosphatidylinositol 3-phosphate (PI3P), activation of PDK1, which recruits and ending with the activation of protein kinase B (PKB, also known as Akt). PI3K is activated by cell surface receptors. Note that PTEN is an inhibitor of the pathway.","definition_xrefs":["PMID:22952397","PMID:20517722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","secondary_identifiers":["Reactome:R-HSA-198203","Reactome:R-HSA-198323","Reactome:R-HSA-198693"],"synonyms":[{"name":"AKT signal transduction","type":"related"},{"name":"AKT signaling","type":"related"},{"name":"AKT signaling cascade","type":"related"},{"name":"AKT signalling cascade","type":"related"},{"name":"PI3K-PKB/Akt pathway","type":"exact"},{"name":"PI3K/Akt signal transduction","type":"exact"},{"name":"PI3K/PKB signal transduction","type":"exact"},{"name":"PKB signal transduction","type":"related"},{"name":"PKB signaling","type":"related"},{"name":"PKB signaling cascade","type":"related"},{"name":"PKB signalling cascade","type":"related"},{"name":"phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"protein kinase B signal transduction","type":"related"},{"name":"protein kinase B signaling","type":"related"},{"name":"protein kinase B signaling cascade","type":"related"},{"name":"protein kinase B signalling cascade","type":"related"}],"termid":"GO:0043491"}


