# terms

id: PATO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an object that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased object quality","termid":"PATO:0002303"}


id: PBO:0048253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 1","termid":"PBO:0048253"}


id: GO:1900091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["PMID:22307851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of raffinose metabolic process","termid":"GO:0080091"},{"relation_name":"regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of raffinose biosynthetic process","synonyms":[{"name":"regulation of raffinose anabolism","type":"exact"},{"name":"regulation of raffinose biosynthesis","type":"exact"},{"name":"regulation of raffinose formation","type":"exact"},{"name":"regulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900091"}


id: MONDO:0004774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An iridocyclitis (disease) caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal endophthalmia","termid":"MONDO:0004853"},{"relation_name":"is_a","term_name":"infectious anterior uveitis","termid":"MONDO:0017210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"gonococcal iridocyclitis","secondary_identifiers":["DOID:9384","ICD10CM:A54.32","SCTID:9091006","ICD9:098.41","UMLS:C0153212","MEDGEN:509207"],"synonyms":[{"name":"Neisseria gonorrhoeae caused iridocyclitis (disease)","type":"exact"},{"name":"Neisseria gonorrhoeae iridocyclitis (disease)","type":"exact"}],"termid":"MONDO:0004774","xrefs":{"Monarch":{"xref_id":"0004774"}}}


id: PBO:0074210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 3","termid":"PBO:0074210"}


id: PBO:0055110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2529","termid":"PBO:0055110"}


id: GO:0048684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an intact axon as a result of injury to an axon.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:lm","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of intact axon in response to injury","termid":"GO:0048683"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of intact axon in response to injury","synonyms":[{"name":"activation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"stimulation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"up regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"up-regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"upregulation of collateral sprouting of intact axon in response to injury","type":"exact"}],"termid":"GO:0048684"}


id: GO:0071548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dexamethasone","synonyms":[{"name":"response to dexamethasone stimulus","type":"exact"}],"termid":"GO:0071548"}


id: GO:1905029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization during AV node cell action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rph","GOC:TermGenie","PMID:19726871","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900827"},{"relation_name":"is_a","term_name":"regulation of membrane depolarization during AV node cell action potential","termid":"GO:1905027"},{"relation_name":"positively_regulates","term_name":"membrane depolarization during AV node cell action potential","termid":"GO:0086045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization during AV node cell action potential","synonyms":[{"name":"activation of membrane depolarization during AV node cardiac muscle cell action potential","type":"narrow"},{"name":"activation of membrane depolarization during AV node cell action potential","type":"narrow"},{"name":"activation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"up regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905029"}


id: GO:0035680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a posterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035680"}


id: PBO:0064933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-protein thioesterase 2","termid":"PBO:0064933"}


id: PBO:0083905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-dependent monooxygenase involved in ubiquinone biosynthesis; responsible for hydroxylation at position C5 and deamination at C4 during ubiquinone (Coenzyme Q) biosynthesis; localizes to matrix face of mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes; human homolog COQ6 can complement yeast null mutant and is implicated in steroid-resistant nephrotic syndrome (SRNS)","termid":"PBO:0083905"}


id: PBO:0076172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 3","termid":"PBO:0076172"}


id: GO:1900095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.","definition_xrefs":["GOC:mr","PMID:20622855","GOC:TermGenie","Wikipedia:XY_sex-determination_system"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dosage compensation by inactivation of X chromosome (obsolete GO:1900095)","synonyms":[{"name":"regulation of Barr body formation","type":"related"},{"name":"regulation of X chromosome inactivation","type":"exact"},{"name":"regulation of chromosome inactivation","type":"broad"}],"termid":"GO:1900095"}


id: GO:0008738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fuculose 1-phosphate = (S)-lactaldehyde + glycerone phosphate.","definition_xrefs":["EC:4.1.2.17","RHEA:12933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-fuculose-phosphate aldolase activity","secondary_identifiers":["KEGG_REACTION:R02262","MetaCyc:FUCPALDOL-RXN"],"synonyms":[{"name":"L-fuculose 1-phosphate aldolase activity","type":"related"},{"name":"L-fuculose-1-phosphate S-lactaldehyde-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"L-fuculose-1-phosphate lactaldehyde-lyase activity","type":"related"},{"name":"fuculose aldolase activity","type":"related"}],"termid":"GO:0008738"}


id: MONDO:0004204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous papilloma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"},{"relation_name":"is_a","term_name":"skin papilloma","termid":"MONDO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"squamous cell skin papilloma","secondary_identifiers":["NCIT:C4462","UMLS:C0345983","SCTID:254661000","MEDGEN:83397","DOID:7380"],"synonyms":[{"name":"Dyskeratotic papilloma of skin","type":"exact"},{"name":"Dyskeratotic papilloma of the skin","type":"exact"},{"name":"Dyskeratotic skin papilloma","type":"exact"},{"name":"hyperkeratotic papilloma of skin","type":"exact"},{"name":"hyperkeratotic papilloma of the skin","type":"exact"},{"name":"hyperkeratotic skin papilloma","type":"exact"},{"name":"parakeratotic papilloma of skin","type":"exact"},{"name":"parakeratotic papilloma of the skin","type":"exact"},{"name":"parakeratotic skin papilloma","type":"exact"},{"name":"squamous cell papilloma of skin","type":"exact"},{"name":"squamous cell papilloma of the skin","type":"exact"},{"name":"squamous cell skin papilloma","type":"exact"},{"name":"zone of skin squamous papilloma","type":"exact"}],"termid":"MONDO:0004204","xrefs":{"Monarch":{"xref_id":"0004204"}}}


id: FYPO:0004999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal horsetail movement","termid":"FYPO:0003835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of horsetail movement","synonyms":[{"name":"normal duration of dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal duration of horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0004999"}


id: MONDO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete food allergy (obsolete MONDO:0002497)","termid":"MONDO:0002497","xrefs":{"Monarch":{"xref_id":"0002497"}}}


id: GO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers that surround an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"organellar chromatophore intermembrane space","synonyms":[{"name":"Paulinella-type chromatophore intermembrane space","type":"exact"}],"termid":"GO:0070115"}


id: PATO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001157 absolute concentration value (obsolete PATO:0001157)","termid":"PATO:0001157"}


id: MONDO:0011431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder of connective tissue caused by mutations in the FBN1 gene. Connective tissue is the material between the cells of the body that gives tissues form and strength. Symptoms include mitral valve prolapse, nearsightedness, borderline and non-progressive aortic enlargement, and skin and skeletal findings that overlap with those seen in Marfan syndrome. Treatment is based on the individuals symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping connective tissue disease","termid":"MONDO:0016663"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MASS syndrome","secondary_identifiers":["OMIM:604308","MESH:C536030","MEDGEN:346932","GARD:8489","UMLS:C1858556","Orphanet:99715"],"synonyms":[{"name":"MASS phenotype","type":"exact"},{"name":"MASS syndrome","type":"exact"},{"name":"Mitral valve prolapse, Aortic enlargement, Skin and Skeletal findings","type":"related"},{"name":"OCTD","type":"related"},{"name":"overlap connective tissue disease","type":"related"}],"termid":"MONDO:0011431","xrefs":{"Monarch":{"xref_id":"0011431"}}}


id: PBO:0055301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2728","termid":"PBO:0055301"}


id: GO:0006641
data:
  {"annotated_genes":["SJAG_03162","SJAG_03604","SJAG_02683","SJAG_04041","SJAG_02487","SJAG_02907","SJAG_03609","SJAG_02543","SJAG_01036","SJAG_02763","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71670,77340,74926,90390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[92253,98824,71913,117976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[115181,92254,94034,90470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triglyceride, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triglycerides are important components of plant oils, animal fats and animal plasma lipoproteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8979227"],"synonyms":[{"name":"triacylglycerol metabolic process","type":"exact"},{"name":"triacylglycerol metabolism","type":"exact"},{"name":"triglyceride metabolism","type":"exact"}],"termid":"GO:0006641","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null}}


id: GO:0016006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A product of the fusion of the mitochondria during spermatogenesis. After the completion of meiosis the mitochondria of the spermatid collect along side the nucleus and fuse into two masses; these wrap around each other to produce the spherical Nebenkern. During flagellum elongation the Nebenkern unfolds and the two derivatives (major and minor mitochondrial derivatives) elongate down the axoneme.","definition_xrefs":["PMID:25265054","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Nebenkern","termid":"GO:0016006"}


id: PBO:0062954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like","termid":"PBO:0062954"}


id: PBO:0089850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Srm160","termid":"PBO:0089850"}


id: GO:0032460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"negatively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein oligomerization","synonyms":[{"name":"down regulation of protein oligomerization","type":"exact"},{"name":"down-regulation of protein oligomerization","type":"exact"},{"name":"downregulation of protein oligomerization","type":"exact"},{"name":"inhibition of protein oligomerization","type":"narrow"}],"termid":"GO:0032460"}


id: GO:0016812
data:
  {"annotated_genes":["SJAG_01995","SJAG_00444","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017168"},{"annotations":[72006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004151"},{"annotations":[63707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide.","definition_xrefs":["EC:3.5.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00444":null,"SJAG_01995":null,"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70906"],"termid":"GO:0016812","terms_by_termid":{"GO:0004151":null,"GO:0017168":null,"GO:0033971":null}}


id: PBO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase (predicted)","termid":"PBO:0002161"}


id: PBO:0111442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation inhibitor, IMPACT domain protein","termid":"PBO:0111442"}


id: SO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from 5S rRNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5S_SINE_retrotransposon","synonyms":[{"name":"5S SINE element","type":"exact"},{"name":"5S SINE retrotransposon","type":"exact"},{"name":"RSS retrotransposon","type":"exact"}],"termid":"SO:0002276"}


id: MONDO:0030703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of vasculitis.","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune vasculitis","secondary_identifiers":["UMLS:C1328843","DOID:0040097","SCTID:427213005","MEDGEN:730236"],"termid":"MONDO:0030703","xrefs":{"Monarch":{"xref_id":"0030703"}}}


id: PBO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0034022"}


id: MONDO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital bilateral aplasia of vas deferens (obsolete MONDO:0000216)","termid":"MONDO:0000216","xrefs":{"Monarch":{"xref_id":"0000216"}}}


id: MONDO:0019245
data:
  {"annotated_genes":["SJAG_00158","SJAG_01407","SJAG_02518","SJAG_03052","SJAG_04790","SJAG_04323","SJAG_02068","SJAG_02056","SJAG_02716","SJAG_02949","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86794,86795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[85698,85696,85697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[85373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[86964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010526"},{"annotations":[86195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[86205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[87279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[86563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[85953,85954,85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder in which harmful amounts of lipids accumulate in cells and tissues. Because of a functionally impaired hydrolase or auxiliary protein, their lipid substrates cannot be degraded, accumulate in the lysosome, and slowly spread to other intracellular membranes.","definition_xrefs":["PMID:21502308","Wikipedia:Lipid_storage_disorder"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00570":null,"SJAG_01407":null,"SJAG_02056":null,"SJAG_02068":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02949":null,"SJAG_03052":null,"SJAG_04323":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"lysosomal lipid storage disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12511","UMLS:C0023794","ICD9:272.7","MEDGEN:9780","DOID:9455","MESH:D008064","ICD9:272.8","Orphanet:79204","SCTID:10741005"],"synonyms":[{"name":"inborn error of lipid storage","type":"exact"},{"name":"inborn lipid storage disorder","type":"exact"},{"name":"lipid storage disease","type":"exact"},{"name":"lipidoses","type":"related"},{"name":"lipidosis","type":"related"},{"name":"lipoid storage diseas","type":"exact"},{"name":"lipoid storage disease","type":"exact"},{"name":"lipoid storage disorder","type":"exact"},{"name":"lipoidoses","type":"related"},{"name":"lipoidosis","type":"related"},{"name":"rare inborn error of lipid storage","type":"exact"}],"termid":"MONDO:0019245","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009744":null,"MONDO:0009756":null,"MONDO:0010155":null,"MONDO:0010526":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0019245"}}}


id: GO:1904371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GOC:TermGenie","PMID:18216290","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to actin cortical patch","termid":"GO:1904370"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell cortex","termid":"GO:1904777"},{"relation_name":"negatively_regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to actin cortical patch","synonyms":[{"name":"down regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"down regulation of protein localization to actin cortical patch","type":"exact"},{"name":"down-regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"down-regulation of protein localization to actin cortical patch","type":"exact"},{"name":"downregulation of protein localisation to actin cortical patch","type":"exact"},{"name":"downregulation of protein localization to actin cortical patch","type":"exact"},{"name":"inhibition of protein localisation to actin cortical patch","type":"narrow"},{"name":"inhibition of protein localization to actin cortical patch","type":"narrow"},{"name":"negative regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904371"}


id: MONDO:0033619
data:
  {"annotated_genes":["SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86082],"is_not":false,"summary":null,"term":"MONDO:0033619"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ALG14-congenital disorder of glycosylation","termid":"MONDO:0100559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"myopathy, epilepsy, and progressive cerebral atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1759100","UMLS:C5436652","OMIM:619036"],"synonyms":[{"name":"MEPCA","type":"exact"}],"termid":"MONDO:0033619","terms_by_termid":{"MONDO:0033619":null},"xrefs":{"Monarch":{"xref_id":"0033619"}}}


id: GO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"}],"termid":"GO:0051940"}


id: PBO:0091389
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteolysis factor that Quiescence Requires","termid":"PBO:0091389"}


id: GO:0140593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The apoplast region surrounding a host plant cell. Plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28082413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host apoplast","synonyms":[{"name":"host cell apoplast","type":"exact"}],"termid":"GO:0140593"}


id: GO:0075519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or viral particle within the host cell cytoplasm along host microtubules. Microtubule-dependent transport involves motor proteins like dynein and kinesin and is mostly used by viruses that target their genomes to the nucleus.","definition_xrefs":["VZ:983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"}


id: PBO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 8","termid":"PBO:0044062"}


id: PBO:0057048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135b","termid":"PBO:0057048"}


id: MOD:00329
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a glutamic acid residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:11139583","PubMed:11980497","PubMed:11821421","Unimod:436#E","RESID:AA0324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyheme-L-glutamate ester","synonyms":[{"name":"5-hydroxymethyl protoporphyrin IX 5-glutamate ester","type":"exact"},{"name":"BINDING Heme (covalent; via 1 link)","type":"exact"},{"name":"Hydroxyheme","type":"related"},{"name":"[3-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-7,12-diethenyl-8,13,17-trimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"cytochrome P450 CYP4A family heme cofactor","type":"exact"},{"name":"hydroxyheme","type":"related"},{"name":"hydroxyheme-L-glutamate ester","type":"exact"}],"termid":"MOD:00329"}


id: FYPO:0007713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, ERMES foci than normal. An ERMES focus is a site that contains one or more ERMES complex(es).","definition_xrefs":["PMID:33483504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"large ERMES foci present in decreased numbers","synonyms":[{"name":"enlarged ERMES foci present in decreased numbers","type":"exact"},{"name":"large ERMES foci present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"large ERMES foci present in decreased numbers during vegetative growth","type":"exact"},{"name":"large ERMES foci present in reduced numbers","type":"exact"}],"termid":"FYPO:0007713"}


id: MONDO:1010841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gangliosidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"},{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliosidosis, domestic cat","secondary_identifiers":["OMIA:000401-9685"],"termid":"MONDO:1010841","xrefs":{"Monarch":{"xref_id":"1010841"}}}


id: PBO:0064897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'gamma","termid":"PBO:0064897"}


id: PBO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.40","termid":"PBO:0002249"}


id: PBO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_developmentally_induce","termid":"PBO:0034177"}


id: PBO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1 (predicted)","termid":"PBO:0017096"}


id: GO:0035069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage-specific break down of the larval midgut during Drosophila metamorphosis, to allow replacement of larval structures by tissues and structures that form the adult fly.","definition_xrefs":["PMID:9409683","GOC:dph","GOC:bf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval midgut histolysis","synonyms":[{"name":"larval midgut regression","type":"exact"}],"termid":"GO:0035069"}


id: PBO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 55","termid":"PBO:0044107"}


id: PBO:0086238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that is required for vacuolar H+-ATPase (V-ATPase) function; peripheral membrane protein; not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)","termid":"PBO:0086238"}


id: PBO:0071205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 46","termid":"PBO:0071205"}


id: MONDO:0957001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary mixed dermis disorder (obsolete MONDO:0957001)","secondary_identifiers":["Orphanet:183481"],"termid":"MONDO:0957001","xrefs":{"Monarch":{"xref_id":"0957001"}}}


id: MONDO:0014703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Adams-Oliver syndrome in which the cause of the disease is a mutation in the DLL4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Adams-Oliver syndrome","termid":"MONDO:0007034"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome 6","secondary_identifiers":["OMIM:616589","GARD:16142","MEDGEN:908556","UMLS:C4225271"],"synonyms":[{"name":"AOS6","type":"related"},{"name":"Adams-Oliver syndrome 6","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in DLL4","type":"exact"},{"name":"Adams-Oliver syndrome type 6","type":"exact"},{"name":"DLL4 Adams-Oliver syndrome","type":"exact"}],"termid":"MONDO:0014703","xrefs":{"Monarch":{"xref_id":"0014703"}}}


id: GO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal dipeptide, Xaa-Xbb from oligopeptide-Xaa-Xbb, when Xaa is not Pro, and Xbb is neither Asp nor Glu. Converts angiotensin I to angiotensin II.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-dipeptidase A activity (obsolete GO:0004246)","synonyms":[{"name":"ACE activity","type":"broad"},{"name":"peptidyl-dipeptidase A activity","type":"exact"}],"termid":"GO:0004246"}


id: PR:000050560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the tif211 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC3G9.09c","termid":"PR:000050560"}


id: PR:O13651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02832","PANTHER:PTHR11946:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.06","secondary_identifiers":["UniProtKB:O13651"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13651"}


id: PBO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4C","termid":"PBO:0044875"}


id: PBO:0026863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abolished_mitotic_sister_chromatid_separation,_with_mononucleate_and_anucleate_compartment_formation","termid":"PBO:0026863"}


id: MONDO:0014228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fuchs' endothelial dystrophy in which the cause of the disease is a mutation in the AGBL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Fuchs endothelial, 8","secondary_identifiers":["UMLS:C3809798","GARD:18223","MEDGEN:816128","OMIM:615523"],"synonyms":[{"name":"AGBL1 Fuchs' endothelial dystrophy","type":"exact"},{"name":"FECD8","type":"related"},{"name":"Fuchs' endothelial dystrophy caused by mutation in AGBL1","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, 8","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, type 8","type":"exact"}],"termid":"MONDO:0014228","xrefs":{"Monarch":{"xref_id":"0014228"}}}


id: GO:0052377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of phytoalexins produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced phytoalexins (obsolete GO:0052377)","synonyms":[{"name":"evasion or tolerance by organism of symbiont phytoalexins","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced phytoalexins","type":"exact"},{"name":"evasion or tolerance of phytoalexins produced by symbiont in response to organism","type":"exact"},{"name":"symbiont phytoalexin detoxification","type":"narrow"}],"termid":"GO:0052377"}


id: GO:0009108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme biosynthetic process (obsolete GO:0009108)","synonyms":[{"name":"coenzyme anabolism","type":"exact"},{"name":"coenzyme and prosthetic group biosynthesis","type":"broad"},{"name":"coenzyme and prosthetic group biosynthetic process","type":"broad"},{"name":"coenzyme biosynthesis","type":"exact"},{"name":"coenzyme formation","type":"exact"},{"name":"coenzyme synthesis","type":"exact"}],"termid":"GO:0009108"}


id: MONDO:0031200
data:
  {"annotated_genes":["SJAG_00335","SJAG_03543","SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87454,87453,87455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030606"},{"annotations":[87456,87457,87458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030607"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_03543":null},"genotype_count":0,"is_obsolete":false,"name":"Bryant-Li-Bhoj neurodevelopmental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:619720"],"termid":"MONDO:0031200","terms_by_termid":{"MONDO:0030606":null,"MONDO:0030607":null},"xrefs":{"Monarch":{"xref_id":"0031200"}}}


id: PBO:0113311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial function; interacts with Hsp82p and copurifies with Ipl1p; expression is copper responsive and downregulated in strains deleted for MAC1, a copper-responsive transcription factor; role in preventing L-A mycovirus pathogenesis; human homolog MYG1 is linked to developmental processes and dermatological diseases, complements yeast null mutant","termid":"PBO:0113311"}


id: PBO:0075653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 2","termid":"PBO:0075653"}


id: PBO:0070068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 25, pseudogene","termid":"PBO:0070068"}


id: SO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic LSU rRNA is an RNA component of the large subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_large_subunit_primary_transcript","termid":"SO:0000325"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_LSU_rRNA","synonyms":[{"name":"cytosolic LSU RNA","type":"exact"},{"name":"cytosolic LSU rRNA","type":"exact"},{"name":"cytosolic large subunit rRNA","type":"exact"}],"termid":"SO:0000651"}


id: MONDO:0013000
data:
  {"annotated_genes":["SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85825],"is_not":false,"summary":null,"term":"MONDO:0013000"}]},"cv_name":"mondo","definition":"An extremely rare form of acute hepatic porphyria characterized by neuro-visceral attacks without cutaneous manifestations.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335","MONDO:0019142","MONDO:0005093"],"is_obsolete":false,"name":"porphyria due to ALA dehydratase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16937","NORD:747","OMIM:612740","Orphanet:100924","MEDGEN:78659","NCIT:C133887","UMLS:C0268328","MESH:C562618"],"synonyms":[{"name":"5-aminolevulinic acid dehydratase deficiency porphyria","type":"related"},{"name":"ALA dehydratase deficiency pophyria","type":"related"},{"name":"ALAD Porphyria","type":"exact"},{"name":"ALAD deficiency","type":"related"},{"name":"ALAD porphyria","type":"exact"},{"name":"ALAD-related porphyria","type":"exact"},{"name":"Delta-aminolevulinate dehydratase deficiency","type":"related"},{"name":"Doss porphyria","type":"related"},{"name":"Lead poisoning, susceptibility to","type":"related"},{"name":"acute hepatic porphyria","type":"exact"},{"name":"aminolevulinate dehydratase deficiency porphyria","type":"related"},{"name":"porphobilinogen synthase deficiency","type":"related"},{"name":"porphyria due to ALAD deficiency","type":"exact"},{"name":"porphyria due to delta-aminolevulinate dehydratase deficiency","type":"exact"},{"name":"porphyria of Doss","type":"exact"},{"name":"porphyria, ALAD","type":"related"},{"name":"porphyria, acute hepatic","type":"related"}],"termid":"MONDO:0013000","terms_by_termid":{"MONDO:0013000":null},"xrefs":{"Monarch":{"xref_id":"0013000"}}}


id: FYPO:0007657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased at one or more meiotic recombination hotspots.","definition_xrefs":["PMID:23395004","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to linear element","termid":"FYPO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to linear element at meiotic recombination hotspot","synonyms":[{"name":"decreased linear element chromatin binding at meiotic DNA double-strand break hotspots","type":"exact"},{"name":"decreased protein localisation to linear element at meiotic recombination hotspot","type":"exact"},{"name":"reduced protein localization to linear element at meiotic recombination hotspot","type":"exact"}],"termid":"FYPO:0007657"}


id: PBO:0068177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 484","termid":"PBO:0068177"}


id: GO:1902472
data:
  {"annotated_genes":["SJAG_00845","SJAG_02380","SJAG_00256","SJAG_02838","SJAG_01787","SJAG_02392","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88202,101753,111764],"is_not":false,"summary":null,"term":"GO:1902472"},{"annotations":[104066,111151,91126,119710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:9852154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, site selection","termid":"GO:2000073"},{"relation_name":"regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1902472","terms_by_termid":{"GO:1902472":null,"GO:1903617":null}}


id: PBO:0029824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell_population_(obsolete_FYPO:0002413)","termid":"PBO:0029824"}


id: MONDO:0017455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperphalangy is a congenital, non-syndromic limb malformation characterized by the presence of an accessory phalanx between metacarpal/metatarsal and proximal phalanx, or between any two other phalanges of a digit, excluding the thumb. Hypherphalangy is almost always bilateral and patients present no more than five digits and no other skeletal anomalies.","definition_xrefs":["Orphanet:295002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hyperphalangy","secondary_identifiers":["MEDGEN:1639275","GARD:21199","UMLS:C4706507","icd11.foundation:177215174","SCTID:763535005"],"synonyms":[{"name":"supernumerary phalanges","type":"exact"},{"name":"supernumerary phalanx","type":"exact"}],"termid":"MONDO:0017455","xrefs":{"Monarch":{"xref_id":"0017455"}}}


id: FYPO:0002962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Mei2 nuclear dot","termid":"FYPO:0002958"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to Mei2 nuclear dot","synonyms":[{"name":"abolished protein localization to meiRNA nuclear dot","type":"related"},{"name":"protein localisation to Mei2 nuclear dot abolished","type":"exact"},{"name":"protein localization to Mei2 nuclear dot abolished","type":"exact"}],"termid":"FYPO:0002962"}


id: GO:0033008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mast cell activation","termid":"GO:0033005"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation involved in immune response","synonyms":[{"name":"positive regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033008"}


id: PR:O14121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nde2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.07","synonyms":[{"name":"Spom972h-nde2","type":"exact"}],"termid":"PR:O14121"}


id: GO:0000038
data:
  {"annotated_genes":["SJAG_01300","SJAG_01458","SJAG_02717","SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72963,92305,103837,73963,77961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"very long chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0000038","terms_by_termid":{"GO:0042761":null}}


id: MONDO:0020508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation of the neurenteric canal, spinal cord and column (obsolete MONDO:0017085)","termid":"MONDO:0017085"},{"relation_name":"is_a","term_name":"syringomyelia","termid":"MONDO:0017987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary syringomyelia","secondary_identifiers":["MEDGEN:721465","SCTID:371076006","GARD:19691","icd11.foundation:257905685","Orphanet:99856","UMLS:C1299627"],"synonyms":[{"name":"congenital syringomyelia","type":"exact"}],"termid":"MONDO:0020508","xrefs":{"Monarch":{"xref_id":"0020508"}}}


id: GO:0009302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of snoRNA class RNA (also referred to as sRNA in Archaea) from a DNA template.","definition_xrefs":["GOC:jl","GOC:krc","PMID:17284456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"sno(s)RNA transcription","synonyms":[{"name":"sRNA transcription","type":"narrow"},{"name":"snoRNA transcription","type":"narrow"}],"termid":"GO:0009302"}


id: PBO:0070285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 26","termid":"PBO:0070285"}


id: SO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:073"],"synonyms":[{"name":"5-methylaminomethyl-2-thiouridine","type":"exact"},{"name":"five methylaminomethyl two thiouridine","type":"exact"},{"name":"mnm5s2U","type":"exact"}],"termid":"SO:0001365"}


id: PBO:0050853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 5","termid":"PBO:0050853"}


id: MONDO:0020422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortopulmonary coronary arterial course is a rare coronary artery congenital malformation characterized by anomalous origin of the coronary artery from the contralateral sinus of Valsalva with course between the aorta and the pulmonary artery. The anomaly is associated with increased risk of sudden cardiac death, especially during exercise.","definition_xrefs":["Orphanet:99086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortopulmonary coronary arterial course","secondary_identifiers":["MEDGEN:1668023","UMLS:C4757971"],"termid":"MONDO:0020422","xrefs":{"Monarch":{"xref_id":"0020422"}}}


id: MONDO:0018640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary vasculitis","secondary_identifiers":["UMLS:C5681200","Orphanet:445197","MEDGEN:1842960","GARD:21863"],"termid":"MONDO:0018640","xrefs":{"Monarch":{"xref_id":"0018640"}}}


id: FYPO:0003211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which secondary cell septum biogenesis is abnormal. Secondary cell septum biogenesis results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of the secondary cell septum during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal secondary cell septum biogenesis","synonyms":[{"name":"abnormal secondary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal secondary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"abnormal secondary cell septum formation","type":"related"},{"name":"abnormal secondary cell septum synthesis","type":"related"},{"name":"abnormal secondary septum biogenesis","type":"exact"}],"termid":"FYPO:0003211"}


id: GO:0102236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hexen-3-one + NADPH + H+ = hexan-3-one + NADP.","definition_xrefs":["GOC:pz","PMID:21169366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"trans-4-hexen-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12296"],"termid":"GO:0102236"}


id: PBO:0061743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 2","termid":"PBO:0061743"}


id: MONDO:0009845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelviscapular dysplasia (Cousin syndrome) is characterized by the association of pelviscapular dysplasia with epiphyseal abnormalities, congenital dwarfism and facial dysmorphism.","definition_xrefs":["Orphanet:93333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pelviscapular dysplasia","secondary_identifiers":["GARD:1555","MEDGEN:342400","SCTID:719299009","MESH:C535550","OMIM:260660","UMLS:C1850040"],"synonyms":[{"name":"COUSIN syndrome","type":"related"},{"name":"Cousin syndrome","type":"exact"},{"name":"craniofacial Dysmorphism, hypoplasia of scapula and pelvis, and short stature","type":"related"},{"name":"craniofacial dysmorphism, hypoplasia of scapula and pelvis and short stature","type":"related"},{"name":"familial pelvis-scapular dysplasia","type":"exact"},{"name":"pelviscapular dysplasia","type":"exact"}],"termid":"MONDO:0009845","xrefs":{"Monarch":{"xref_id":"0009845"}}}


id: GO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.","definition_xrefs":["GOC:add","PMID:26086132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immunity memory response","termid":"GO:0090714"}


id: PBO:0036534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein (RNP) complex Utp502 (predicted)","termid":"PBO:0036534"}


id: PBO:0112515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF181 like","termid":"PBO:0112515"}


id: PBO:0077694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 2","termid":"PBO:0077694"}


id: GO:0097592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the ventral disc of Giardia species (trophozoite stage) where two portions of the same array of microtubules overlap (the microtubule array makes a complete circle and overlaps on itself).","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc overlap zone","synonyms":[{"name":"overlap zone","type":"broad"},{"name":"ventral disk overlap zone","type":"related"}],"termid":"GO:0097592"}


id: PATO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which starts later than the natural start time or the reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed","synonyms":[{"name":"late","type":"related"}],"termid":"PATO:0000502"}


id: MONDO:1011632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetanic torticollar spasms, non-human animal","secondary_identifiers":["OMIA:000993"],"termid":"MONDO:1011632","xrefs":{"Monarch":{"xref_id":"1011632"}}}


id: RO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_during","termid":"RO:0002093"}


id: GO:0014057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of acetylcholine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014056"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, cholinergic","termid":"GO:0032224"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"activation of acetylcholine secretion","type":"narrow"},{"name":"stimulation of acetylcholine secretion","type":"narrow"},{"name":"up regulation of acetylcholine secretion","type":"exact"},{"name":"up-regulation of acetylcholine secretion","type":"exact"},{"name":"upregulation of acetylcholine secretion","type":"exact"}],"termid":"GO:0014057"}


id: GO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a component of the complement pathway binding to a complement receptor. Such components include both whole complement proteins and fragments of complement proteins generated through the activity of the complement pathway.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"complement receptor mediated signaling pathway","synonyms":[{"name":"complement receptor mediated signalling pathway","type":"exact"},{"name":"immune response-regulating cell surface receptor signalling pathway","type":"broad"}],"termid":"GO:0002430"}


id: PBO:0038678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 4","termid":"PBO:0038678"}


id: PBO:0110316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF for Sar1, WD repeat protein Spo14","termid":"PBO:0110316"}


id: GO:1902792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of pyrroline-5-carboxylate reductase activity.","definition_xrefs":["PMID:2722838","GO_REF:0000088","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase complex","termid":"GO:1902792"}


id: PR:O94326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pir2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C725.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.08","synonyms":[{"name":"Spom972h-pir2","type":"exact"}],"termid":"PR:O94326"}


id: PBO:0049280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-disulfide reductase","termid":"PBO:0049280"}


id: PBO:0028402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_respiratory_electron_transport","termid":"PBO:0028402"}


id: FYPO:0004400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5823.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on KT5823","synonyms":[{"name":"normal cell population growth in presence of KT5823","type":"exact"},{"name":"normal cell population growth on KT5823","type":"exact"},{"name":"normal cellular response to KT5823","type":"related"},{"name":"normal vegetative cell population growth on KT5823","type":"exact"}],"termid":"FYPO:0004400"}


id: FYPO:0003059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of an RNA to chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA localization","termid":"FYPO:0003058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA localization to chromatin","synonyms":[{"name":"normal RNA localisation to chromatin","type":"exact"}],"termid":"FYPO:0003059"}


id: MONDO:0060592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sweeney-Cox syndrome","secondary_identifiers":["UMLS:C4540299","OMIM:617746","DOID:0080538","MEDGEN:1625659"],"synonyms":[{"name":"SWCOS","type":"related"},{"name":"Sweeney-Cox syndrome","type":"exact"}],"termid":"MONDO:0060592","xrefs":{"Monarch":{"xref_id":"0060592"}}}


id: PBO:0113122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential ATP-binding protein required for DNA replication; component of the pre-replicative complex (pre-RC) which requires ORC to associate with chromatin and is in turn required for Mcm2-7p DNA association; dual role as a mitotic cyclin-dependent kinase inhibitor, that binds to and inhibits Cdc28p/Clb2p along with Sic1p, contributing to mitotic exit; homologous to S. pombe Cdc18p; relocalizes from nucleus to cytoplasm upon DNA replication stress; degraded in response to plasma membrane stress","termid":"PBO:0113122"}


id: PATO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ploidy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ploidy","termid":"PATO:0001374"}


id: PBO:0038838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 8","termid":"PBO:0038838"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["UniProtKB:Q2EEM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: PBO:0049331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 2 pseudogene 1","termid":"PBO:0049331"}


id: PBO:0072580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 3","termid":"PBO:0072580"}


id: GO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"}


id: MOD:00846
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"stub","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"}


id: GO:0048770
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes.","definition_xrefs":["GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"pigment granule","termid":"GO:0048770"}


id: GO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac right atrium from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium formation","termid":"GO:0003210"},{"relation_name":"part_of","term_name":"cardiac right atrium morphogenesis","termid":"GO:0003213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right atrium formation","termid":"GO:0003217"}


id: GO:0046107
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"uracil metabolic process","termid":"GO:0019860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uracil biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil anabolism","type":"exact"},{"name":"uracil biosynthesis","type":"exact"},{"name":"uracil formation","type":"exact"},{"name":"uracil synthesis","type":"exact"}],"termid":"GO:0046107","terms_by_termid":{"GO:0006223":null}}


id: GO:0051508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + stigmasterol = UDP + O-glucosyl-stigmasterol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete stigmasterol UDP-glucosyltransferase activity (obsolete GO:0051508)","termid":"GO:0051508"}


id: PBO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing defective protein Sde2","termid":"PBO:0001846"}


id: MONDO:0003781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the bronchi.","definition_xrefs":["NCIT:C2911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"},{"relation_name":"is_a","term_name":"tracheobronchitis","termid":"MONDO:0021925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchitis","secondary_identifiers":["ICD9:466.0","CSP:2596-1500","UMLS:C0006277","ICD9:491.9","EFO:0009661","SCTID:32398004","ICD9:490","MESH:D001991","ICD9:491","MEDGEN:2736","DOID:6132","icd11.foundation:11753425"],"synonyms":[{"name":"CI - chest infection","type":"exact"},{"name":"acute bronchitis","type":"narrow"},{"name":"acute bronchitis and bronchiolitis","type":"related"},{"name":"bronchial infection","type":"exact"},{"name":"bronchus inflammation","type":"exact"},{"name":"chest cold","type":"related"},{"name":"chest infection","type":"related"},{"name":"chronic bronchitis","type":"narrow"},{"name":"inflammation of bronchus","type":"exact"},{"name":"recurrent wheezy bronchitis","type":"related"}],"termid":"MONDO:0003781","xrefs":{"Monarch":{"xref_id":"0003781"}}}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: GO:0085034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts an NF-kappaB-mediated signaling cascade in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18250452","PMID:22442494","PMID:33567255","PMID:24648522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host NF-kappaB cascade","termid":"GO:0085032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host NF-kappaB cascade","secondary_identifiers":["VZ:695"],"synonyms":[{"name":"disruption of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"disruption of host canonical NF-kappaB cascade","type":"related"},{"name":"negative regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"suppression by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"symbiont-mediated suppression of host canonical NF-kappaB cascade","type":"related"}],"termid":"GO:0085034"}


id: GO:0030084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment protein complex that forms part of the photosystem I associated light-harvesting complex I; contains two proteins (usually about 20 kDa); has a fluorescence maximum of 730 nm.","definition_xrefs":["PMID:8825475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PSI associated light-harvesting complex I","termid":"GO:0009518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"PSI associated light-harvesting complex I, LHCIb subcomplex","termid":"GO:0030084"}


id: PBO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 34","termid":"PBO:0071896"}


id: PR:G2TRS2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.19","synonyms":[{"name":"Spom972h-new20","type":"exact"}],"termid":"PR:G2TRS2"}


id: PBO:0045080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP5 pseudogene 1","termid":"PBO:0045080"}


id: MONDO:0010841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2B","secondary_identifiers":["MESH:C536465","DOID:0110947","OMIM:600193","UMLS:C1838447","MEDGEN:373973","GARD:5522"],"synonyms":[{"name":"WS2B","type":"exact"},{"name":"Waardenburg syndrome type IIB","type":"exact"},{"name":"Waardenburg syndrome, type 2B","type":"related"}],"termid":"MONDO:0010841","xrefs":{"Monarch":{"xref_id":"0010841"}}}


id: GO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of tissue polarity","termid":"GO:0007164"},{"relation_name":"part_of","term_name":"morphogenesis of a polarized epithelium","termid":"GO:0001738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity","synonyms":[{"name":"establishment of planar cell polarity","type":"narrow"}],"termid":"GO:0001736"}


id: GO:0030460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Fungi) (obsolete GO:0030460)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030460"}


id: FYECO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking glucose and are then allowed to recover in rich medium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose starvation and recovery","termid":"FYECO:0000310"}


id: MONDO:0968977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 9, autosomal recessive","secondary_identifiers":["UMLS:C5935607","MEDGEN:1854926","OMIM:620786"],"termid":"MONDO:0968977","xrefs":{"Monarch":{"xref_id":"0968977"}}}


id: MONDO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the cerebral hemisphere.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"},{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cerebral hemisphere cancer","secondary_identifiers":["ICD9:191.8","MEDGEN:91109","NCIT:C4577","UMLS:C0346903","SCTID:429033009","DOID:368"],"synonyms":[{"name":"cancer of cerebral hemisphere","type":"exact"},{"name":"cancer of telencephalon","type":"exact"},{"name":"cerebral cancer","type":"exact"},{"name":"cerebrum cancer","type":"related"},{"name":"malignant cerebral hemisphere neoplasm","type":"exact"},{"name":"malignant cerebral hemispheric neoplasm","type":"exact"},{"name":"malignant cerebral hemispheric tumor","type":"exact"},{"name":"malignant cerebral hemispheric tumour","type":"exact"},{"name":"malignant cerebral neoplasm","type":"exact"},{"name":"malignant cerebral tumor","type":"exact"},{"name":"malignant cerebral tumour","type":"exact"},{"name":"malignant neoplasm of cerebral hemisphere","type":"exact"},{"name":"malignant neoplasm of cerebral hemispheres","type":"exact"},{"name":"malignant neoplasm of cerebrum","type":"exact"},{"name":"malignant neoplasm of telencephalon","type":"exact"},{"name":"malignant neoplasm of the cerebral hemispheres","type":"exact"},{"name":"malignant neoplasm of the cerebrum","type":"exact"},{"name":"malignant telencephalon neoplasm","type":"exact"},{"name":"malignant tumor of cerebral hemispheres","type":"exact"},{"name":"malignant tumor of cerebrum","type":"exact"},{"name":"malignant tumor of the cerebral hemispheres","type":"exact"},{"name":"malignant tumor of the cerebrum","type":"exact"},{"name":"malignant tumour of cerebral hemispheres","type":"exact"},{"name":"malignant tumour of cerebrum","type":"exact"},{"name":"malignant tumour of the cerebral hemispheres","type":"exact"},{"name":"malignant tumour of the cerebrum","type":"exact"},{"name":"telencephalon cancer","type":"exact"},{"name":"tumor of cerebrum","type":"broad"},{"name":"tumour of cerebrum","type":"broad"}],"termid":"MONDO:0002731","xrefs":{"Monarch":{"xref_id":"0002731"}}}


id: GO:1905891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["GOC:aruk","PMID:21803450","GOC:TermGenie","GO_REF:0000058","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to thapsigargin (obsolete GO:1905891)","termid":"GO:1905891"}


id: GO:0032722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"positively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine production","secondary_identifiers":["GO:0090197","GO:0045080"],"synonyms":[{"name":"activation of chemokine production","type":"narrow"},{"name":"positive regulation of chemokine biosynthetic process","type":"narrow"},{"name":"positive regulation of chemokine secretion","type":"narrow"},{"name":"stimulation of chemokine production","type":"narrow"},{"name":"up regulation of chemokine production","type":"exact"},{"name":"up-regulation of chemokine production","type":"exact"},{"name":"upregulation of chemokine production","type":"exact"}],"termid":"GO:0032722"}


id: PR:Q9C1W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.06","synonyms":[{"name":"DNA ligase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-adl1","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W9"}


id: MONDO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute insulin response","secondary_identifiers":["MEDGEN:355729","UMLS:C1866503","OMIM:601676"],"synonyms":[{"name":"AIR","type":"exact"},{"name":"acute insulin response","type":"exact"}],"termid":"MONDO:0011126","xrefs":{"Monarch":{"xref_id":"0011126"}}}


id: PBO:0031413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_vegetative_cell","termid":"PBO:0031413"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: PBO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter Fnx1","termid":"PBO:0004061"}


id: MOD:01388
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanol.","definition_xrefs":["PubMed:7328054","RESID:AA0465","ChEBI:15675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanol","synonyms":[{"name":"(2R)-1-aminopropan-2-ol","type":"exact"},{"name":"1-amino-2-hydroxypropane","type":"exact"},{"name":"1-amino-2-propanol","type":"exact"},{"name":"1-methyl-2-aminoethanol","type":"exact"},{"name":"2-amino-1-methylethanol","type":"exact"},{"name":"2-hydroxy-1-propylamine","type":"exact"},{"name":"2-hydroxypropanamine","type":"exact"},{"name":"2-hydroxypropylamine","type":"exact"},{"name":"MOD_RES Decarboxylated threonine","type":"exact"},{"name":"alpha-aminoisopropyl alcohol","type":"exact"},{"name":"dCbxThr","type":"exact"},{"name":"decarboxylated threonine","type":"exact"},{"name":"isopropanolamine","type":"exact"},{"name":"threamine","type":"exact"}],"termid":"MOD:01388"}


id: PBO:0077962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 15-1","termid":"PBO:0077962"}


id: GO:0099066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of neuronal dense core vesicle membrane (obsolete GO:0099066)","termid":"GO:0099066"}


id: PBO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member b","termid":"PBO:0042389"}


id: MONDO:0022574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary atresia","termid":"MONDO:0008867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"biliary atresia intrahepatic syndromic form","secondary_identifiers":["GARD:888"],"termid":"MONDO:0022574","xrefs":{"Monarch":{"xref_id":"0022574"}}}


id: GO:0044030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA methylation (obsolete GO:0044030)","termid":"GO:0044030"}


id: FYPO:0005825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to iron","synonyms":[{"name":"hypersensitive to iron","type":"exact"},{"name":"sensitive to iron during mitotic cell cycle","type":"related"},{"name":"sensitive to iron during vegetative growth","type":"exact"},{"name":"sensitive to iron ions","type":"exact"}],"termid":"FYPO:0005825"}


id: PBO:0075845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 6","termid":"PBO:0075845"}


id: GO:0047693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = AMP + H+ + diphosphate.","definition_xrefs":["RHEA:14245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0047429","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ATP diphosphatase activity","secondary_identifiers":["EC:3.6.1.8","MetaCyc:ATP-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"ATP diphosphohydrolase","type":"broad"},{"name":"ATP diphosphohydrolase (diphosphate-forming)","type":"exact"},{"name":"ATP pyrophosphatase activity","type":"exact"},{"name":"adenosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0047693"}


id: MONDO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A relatively common disorder characterized by a fairly specific pattern of tremors which are most prominent in the upper extremities and neck, inducing titubations of the head. The tremor is usually mild, but when severe may be disabling. An autosomal dominant pattern of inheritance may occur in some families (i.e., familial tremor). (Mov Disord 1988;13(1):5-10)","definition_xrefs":["MESH:D020329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential tremor","secondary_identifiers":["SCTID:609558009","EFO:0003108","DOID:4990","ICD10CM:G25.0","ICD9:333.1","Orphanet:862","UMLS:C0270736","MEDGEN:78725","OMIMPS:190300"],"synonyms":[{"name":"benign essential tremor","type":"exact"},{"name":"essential hereditary tremor","type":"narrow"},{"name":"shaky hand syndrome","type":"exact"},{"name":"tremor, hereditary essential","type":"narrow"}],"termid":"MONDO:0003233","xrefs":{"Monarch":{"xref_id":"0003233"}}}


id: PBO:0086503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative precursor of the subtilisin-like protease III; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YSP3 has a paralog, PRB1, that arose from the whole genome duplication","termid":"PBO:0086503"}


id: PBO:0090772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1","termid":"PBO:0090772"}


id: GO:0034420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an acetyl group to one or more amino acids in a protein, occurring before the protein has been completely translated and released from the ribosome.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete co-translational protein acetylation (obsolete GO:0034420)","synonyms":[{"name":"co-translational protein amino acid acetylation","type":"exact"},{"name":"cotranslational protein amino acid acetylation","type":"exact"}],"termid":"GO:0034420"}


id: GO:0102265
data:
  {"annotated_genes":["SJAG_03240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66186],"is_not":false,"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil47 in tRNA + NAD(P) = H+ + a uracil47 in tRNA + NAD(P)H.","definition_xrefs":["EC:1.3.1.89","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016491","GO:0140098","GO:0003824","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"tRNA-dihydrouridine47 synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-12457"],"termid":"GO:0102265","terms_by_termid":{"GO:0102265":null}}


id: PBO:0083458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HXT14","termid":"PBO:0083458"}


id: GO:0030917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary development","synonyms":[{"name":"MHB development","type":"exact"},{"name":"isthmic organizer development","type":"exact"},{"name":"isthmomesencephalic boundary development","type":"exact"},{"name":"isthmus development","type":"exact"},{"name":"midbrain-hindbrain orgainizer development","type":"exact"}],"termid":"GO:0030917"}


id: PATO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the anterior-posterior axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior polarity","synonyms":[{"name":"rostral-caudal polarity ","type":"exact"},{"name":"superior-caudal polarity (human torso)","type":"exact"}],"termid":"PATO:0002024"}


id: FYPO:0003639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cell wall biogenesis","synonyms":[{"name":"abolished fungal-type cell wall biogenesis","type":"exact"},{"name":"fungal-type cell wall biogenesis abolished","type":"exact"}],"termid":"FYPO:0003639"}


id: GO:0051788
data:
  {"annotated_genes":["SJAG_03815","SJAG_02341","SJAG_05022","SJAG_01737","SJAG_01556","SJAG_00054","SJAG_04187","SJAG_00173","SJAG_03345","SJAG_04612","SJAG_00270","SJAG_00552","SJAG_00219","SJAG_01160","SJAG_03657","SJAG_04567","SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110389,88426,110388,104570,71270,112680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[110717,110125,108383,110019,114009],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[88144,113372,89616,103774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[111240,76914],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00552":null,"SJAG_01160":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to misfolded protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051788","terms_by_termid":{"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: PBO:0085083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear encoded protein needed for splicing of mitochondrial intron; required for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions","termid":"PBO:0085083"}


id: GO:0080073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a coumaroyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"spermidine:coumaroyl CoA N-acyltransferase activity","termid":"GO:0080073"}


id: GO:0004028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-chloroallyl aldehyde dehydrogenase activity","termid":"GO:0004028"}


id: GO:0140382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryptamine + reduced acceptor + O2 = 4-hydroxytryptamine + acceptor + H2O.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tryptamine 4-monooxygenase activity","secondary_identifiers":["RHEA:15865","EC:1.14.99.59"],"termid":"GO:0140382"}


id: FYPO:0008359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal within the body of a gene. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased nucleosome occupancy in gene body","termid":"FYPO:0008359"}


id: PBO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD1 antisense RNA 1","termid":"PBO:0046364"}


id: GO:0033266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of choline across a membrane.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline transmembrane transporter activity","termid":"GO:0015220"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type choline transporter activity","synonyms":[{"name":"ABC-type choline transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent choline transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled choline transmembrane transporter activity","type":"related"},{"name":"choline-transporting ATPase activity","type":"related"}],"termid":"GO:0033266"}


id: PBO:0053873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1149","termid":"PBO:0053873"}


id: PBO:0078723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 3-1","termid":"PBO:0078723"}


id: PBO:0040645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAZ1A antisense RNA 1","termid":"PBO:0040645"}


id: PBO:0068604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 55, pseudogene","termid":"PBO:0068604"}


id: GO:0047841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-D-gluconate + ATP = 6-phospho-2-dehydro-D-gluconate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.13","RHEA:10788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"dehydrogluconokinase activity","secondary_identifiers":["KEGG_REACTION:R02658","MetaCyc:DEHYDOGLUCONOKINASE-RXN"],"synonyms":[{"name":"2-ketogluconate kinase activity","type":"related"},{"name":"2-ketogluconokinase activity","type":"related"},{"name":"ATP:2-dehydro-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"dehydogluconokinase activity","type":"exact"},{"name":"ketogluconokinase (phosphorylating)","type":"related"},{"name":"ketogluconokinase activity","type":"related"}],"termid":"GO:0047841"}


id: PBO:0077676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 4","termid":"PBO:0077676"}


id: MONDO:0030360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 6","secondary_identifiers":["MEDGEN:1794175","OMIM:619484","UMLS:C5561965"],"synonyms":[{"name":"PFIC6","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 6","type":"exact"}],"termid":"MONDO:0030360","xrefs":{"Monarch":{"xref_id":"0030360"}}}


id: PBO:0072932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 12","termid":"PBO:0072932"}


id: GO:0099703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The induction of synaptic vesicle release by any process that leads to a rise in intracellular calcium ion concentration at the presynapse. This is the first step in synaptic transmission.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0016192"],"is_obsolete":false,"name":"induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration","termid":"GO:0099703"}


id: PBO:0067773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 73","termid":"PBO:0067773"}


id: GO:2001034
data:
  {"annotated_genes":["SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107778],"is_not":false,"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of double-strand break repair","termid":"GO:2000781"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"positively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"positive regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of NHEJ","type":"exact"}],"termid":"GO:2001034","terms_by_termid":{"GO:2001034":null}}


id: GO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a calcium or calmodulin-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction (obsolete GO:0075133)","synonyms":[{"name":"modulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"perturbation of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075133"}


id: PBO:0084947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional lipase/hydrolase/phospholipase; triacylglycerol lipase, steryl ester hydrolase, and Ca2+-independent phospholipase A2; catalyzes acyl-CoA dependent acylation of LPA to PA; required with Tgl3p for timely bud formation; phosphorylated and activated by Cdc28p; TGL4 has a paralog, TGL5, that arose from the whole genome duplication","termid":"PBO:0084947"}


id: PBO:0063384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 4","termid":"PBO:0063384"}


id: MOD:00767
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and a protein amino group to form a Schiff-base or an Amadori ketosamine residue adduct.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"glycated residue","termid":"MOD:00767"}


id: GO:2001217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001217)","synonyms":[{"name":"regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001217"}


id: PBO:0052768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 60","termid":"PBO:0052768"}


id: GO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the production of molecular mediator of immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"negatively_regulates","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of production of molecular mediator of immune response","synonyms":[{"name":"down regulation of production of molecular mediator of immune response","type":"exact"},{"name":"down-regulation of production of molecular mediator of immune response","type":"exact"},{"name":"downregulation of production of molecular mediator of immune response","type":"exact"},{"name":"inhibition of production of molecular mediator of immune response","type":"narrow"}],"termid":"GO:0002701"}


id: MONDO:0012514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypomyelination-congenital cataract is characterized by the onset of cataract either at birth or in the first two months of life, delayed psychomotor development by the end of the first year of life and moderate intellectual deficit.","definition_xrefs":["Orphanet:85163"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 5","secondary_identifiers":["NANDO:2201296","OMIM:610532","SCTID:702379005","UMLS:C1864663","DOID:0060793","GARD:11980","ICD9:341.8","MESH:C567166","MEDGEN:501134","NANDO:1200584"],"synonyms":[{"name":"FAM126A leukodystrophy","type":"exact"},{"name":"HLD5","type":"exact"},{"name":"hypomyelinating leukodystrophy type 5","type":"exact"},{"name":"hypomyelination - congenital cataract","type":"related"},{"name":"hypomyelination and congenital cataract","type":"related"},{"name":"hypomyelination and congenital cataract: HCC","type":"related"},{"name":"hypomyelination-congenital cataract syndrome","type":"exact"},{"name":"leukodystrophy caused by mutation in FAM126A","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 5","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 5","type":"exact"}],"termid":"MONDO:0012514","xrefs":{"Monarch":{"xref_id":"0012514"}}}


id: MONDO:0011704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, B (obsolete MONDO:0011704)","secondary_identifiers":["OMIM:606689"],"synonyms":[{"name":"GLC1B","type":"exact"},{"name":"glaucoma 1, open angle, B","type":"exact"},{"name":"glaucoma 1B, primary open angle, adult onset","type":"exact"}],"termid":"MONDO:0011704","xrefs":{"Monarch":{"xref_id":"0011704"}}}


id: MONDO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transitional cell carcinoma (obsolete MONDO:0002384)","termid":"MONDO:0002384","xrefs":{"Monarch":{"xref_id":"0002384"}}}


id: PBO:0046955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 76 member B","termid":"PBO:0046955"}


id: FYPO:0003621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which posttranscriptional addition of a methyl group to the 2'-oxygen atom of a nucleotide residue in an U6 snRNA molecule is abolished.","definition_xrefs":["PomBase:mah","GO:1990438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished U6 2'-O-snRNA methylation","synonyms":[{"name":"U6 2'-O-snRNA methylation abolished","type":"exact"},{"name":"U6 2'-O-snRNA methylation abolished during vegetative growth","type":"exact"},{"name":"abolished U6 2'-O-snRNA methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003621"}


id: GO:2001239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"regulation of dependence receptor signaling pathway","type":"related"},{"name":"regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001239"}


id: PR:Q50HP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q50HP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.22c","synonyms":[{"name":"Spom972h-dad4","type":"exact"},{"name":"outer kinetochore protein dad4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q50HP4"}


id: GO:0008525
data:
  {"annotated_genes":["SJAG_01731","SJAG_02897","SJAG_00669","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94790,98290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[94791,100561,98291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[97915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of phosphatidylcholine into, out of or within a cell, or between cells. Phosphatidylcholine refers to a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null,"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008525","terms_by_termid":{"GO:0090554":null,"GO:0120019":null,"GO:0140345":null}}


id: MONDO:0850230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urticaria that is characterized by the presence of urticaria for a period exceeding 6 weeks, assuming symptoms for most days of the week.","definition_xrefs":["DOID:0080747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic urticaria","secondary_identifiers":["MEDGEN:537829","UMLS:C0263338","icd11.foundation:901000137"],"termid":"MONDO:0850230","xrefs":{"Monarch":{"xref_id":"0850230"}}}


id: PBO:0075831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure specific recognition protein 1","termid":"PBO:0075831"}


id: PBO:0083062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoyl transsuccinylase; component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA in the TCA cycle; phosphorylated","termid":"PBO:0083062"}


id: PBO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromosomal_translocation","termid":"PBO:0030464"}


id: PBO:0046885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member A","termid":"PBO:0046885"}


id: FYPO:0006479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cohesin loading is abnormal. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["GO:0071921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal cohesin loading","synonyms":[{"name":"abnormal cohesin association with chromatin","type":"exact"},{"name":"abnormal cohesin localisation to chromatin","type":"exact"},{"name":"abnormal cohesin localization to chromatin","type":"exact"}],"termid":"FYPO:0006479"}


id: PBO:0087795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi2/Snf2-related ATPase; catalytic subunit of SWR1 complex, which exchanges histone variant H2A.Z (Htz1p) for chromatin-bound histone H2A; N-terminus can deliver H2A.Z-H2B dimer to DNA-(H3-H4)2 tetrasome; relocalizes to cytosol in response to hypoxia; chronological aging factor, mediates lifespan extension by dietary restriction","termid":"PBO:0087795"}


id: GO:0009925
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"basal plasma membrane","termid":"GO:0009925"}


id: PBO:0089269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPCC569.09  ortholog, syntenic position","termid":"PBO:0089269"}


id: MONDO:0044274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Individuals with high altitude adaptation hemoglobin can survive in extremely hypoxic conditions without an increase in hematocrit or the development of erythrocytosis or polycythemia vera (summary by {3:Lorenzo et al., 2014}).","definition_xrefs":["OMIM:609070"],"gene_count":0,"genotype_count":0,"name":"obsolete hemoglobin, high altitude adaptation (obsolete MONDO:0044274)","synonyms":[{"name":"HALAH","type":"related"},{"name":"HEMOGLOBIN, high altitude adaptation","type":"related"},{"name":"Hemoglobin, high oxygen saturation of","type":"related"},{"name":"hemoglobin, high altitude adaptation","type":"exact"}],"termid":"MONDO:0044274","xrefs":{"Monarch":{"xref_id":"0044274"}}}


id: PBO:0114092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp8","termid":"PBO:0114092"}


id: PBO:0080401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33B late endosome and lysosome associated","termid":"PBO:0080401"}


id: PR:O42646
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.05c","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc6","type":"exact"},{"name":"ubiquitin carrier protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42646"}


id: GO:0072683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000084","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell extravasation","synonyms":[{"name":"T lymphocyte extravasation","type":"exact"},{"name":"T-cell extravasation","type":"exact"},{"name":"T-lymphocyte extravasation","type":"exact"}],"termid":"GO:0072683"}


id: PBO:0005062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein, involved in localization to plasma membrane (predicted)","termid":"PBO:0005062"}


id: MONDO:0015832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"True unicornuate uterus is a rare, non-syndromic uterovaginal malformation characterized by a crescent-shaped, small-sized uterus containing a single horn and fallopian tube with no rudimentary horn. Urinary tract anomalies are frequently associated.","definition_xrefs":["Orphanet:180074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral aplasia of the mullerian ducts","termid":"MONDO:0015831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"true unicornuate uterus","secondary_identifiers":["GARD:20174","icd11.foundation:113532659","MEDGEN:1863468","UMLS:C5848180"],"synonyms":[{"name":"complete unilateral Mullerian aplasia","type":"exact"},{"name":"complete unilateral Müllerian aplasia","type":"exact"},{"name":"complete unilateral aplasia of the Mullerian ducts","type":"exact"},{"name":"complete unilateral aplasia of the Müllerian ducts","type":"exact"},{"name":"unicornuate uterus without rudimentary horn","type":"exact"}],"termid":"MONDO:0015832","xrefs":{"Monarch":{"xref_id":"0015832"}}}


id: PATO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000199 relative consumption (obsolete PATO:0000199)","termid":"PATO:0000199"}


id: PBO:0065057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 11","termid":"PBO:0065057"}


id: GO:0052617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADPH + ent-kaur-16-en-19-al + oxygen = H2O + NADP+ + ent-kaurenoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-kaur-16-en-19-al oxidase activity (obsolete GO:0052617)","termid":"GO:0052617"}


id: PBO:0049635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 38","termid":"PBO:0049635"}


id: PBO:0079133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic stromal lymphopoietin","termid":"PBO:0079133"}


id: PBO:0071600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 17","termid":"PBO:0071600"}


id: PBO:0062989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin coregulated like","termid":"PBO:0062989"}


id: PBO:0087307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small (67 amino acids) protein involved in sporulation; localizes to the prospore membrane; phosphorylated during meiosis; a longer, 5'-extended mRNA is also transcribed beginning in mid-meiosis, regulated by two MSEs (middle sporulation elements), and includes an uORF of 15 codons in its 5'-UTR; evidence transcription is regulated by Pdr1p","termid":"PBO:0087307"}


id: PBO:0042995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis endoplasmic reticulum protein","termid":"PBO:0042995"}


id: PBO:0047871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q22.3)","termid":"PBO:0047871"}


id: PBO:0061358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 18","termid":"PBO:0061358"}


id: GO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A reversible switch of a cell from one phenotype to another that occurs upon infection of a host or host cell. For example, Candida albicans switches from a unicellular form to an invasive multicellular filamentous form upon infection of host tissue. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["PMID:16696644","Wikipedia:Phenotypic_switching","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete phenotypic switching in response to host (obsolete GO:0036167)","termid":"GO:0036167"}


id: GO:0060131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a corticotropic hormone secreting cell over time, from its formation to the mature structure. An corticotropic hormone secreting cell is a basophil cell of the anterior pituitary that produces corticotropin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"corticotropin hormone secreting cell differentiation","termid":"GO:0060128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticotropin hormone secreting cell development","synonyms":[{"name":"adrenocorticotrophic hormone secreting cell development","type":"exact"},{"name":"adrenocorticotropic hormone secreting cell development","type":"exact"},{"name":"corticotrope development","type":"exact"},{"name":"corticotroph development","type":"related"},{"name":"corticotrophin hormone secreting cell development","type":"related"}],"termid":"GO:0060131"}


id: PBO:0084549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus","termid":"PBO:0084549"}


id: PBO:0050896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 1","termid":"PBO:0050896"}


id: GO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of brown fat cells by cell division, resulting in the expansion of their population. A brown fat cell is a fat cell found the thermogenic form of adipose tissue found in newborns of many species.","definition_xrefs":["GOC:mah","CL:0000449","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brown fat cell proliferation","synonyms":[{"name":"brown adipocyte proliferation","type":"exact"},{"name":"brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070342"}


id: GO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid metabolic process","synonyms":[{"name":"activation of fatty acid metabolic process","type":"narrow"},{"name":"positive regulation of fatty acid metabolism","type":"exact"},{"name":"stimulation of fatty acid metabolic process","type":"narrow"},{"name":"up regulation of fatty acid metabolic process","type":"exact"},{"name":"up-regulation of fatty acid metabolic process","type":"exact"},{"name":"upregulation of fatty acid metabolic process","type":"exact"}],"termid":"GO:0045923"}


id: GO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of long-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048171"}


id: MONDO:0013524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bleeding diathesis due to thromboxane synthesis deficiency (obsolete MONDO:0013524)","termid":"MONDO:0013524","xrefs":{"Monarch":{"xref_id":"0013524"}}}


id: MONDO:0100396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(7;12)(q36;p13). (A chromosomal translocation involving the ETV6 gene on chromosome 12p13 and HLXB9 gene on chromosome 7q36.)","definition_xrefs":["NCIT:C122689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(7;12)(q36;p13)","secondary_identifiers":["NCIT:C122690"],"synonyms":[{"name":"AML, t(7;12)(q36;p13)","type":"exact"}],"termid":"MONDO:0100396","xrefs":{"Monarch":{"xref_id":"0100396"}}}


id: MONDO:0012297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, complex type of hereditary spastic paraplegia characterized by early-onset progressive spastic paraplegia presenting in infancy, associated with optic atrophy, fixation nystagmus, polyneuropathy occurring in late childhood/early adolescence leading to severe motor disability and progressive joint contractures and scoliosis. SPOAN syndrome is caused by mutations in the KLC2 gene (11q13.1), encoding kinesin light chain 2.","definition_xrefs":["Orphanet:320406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia, optic atropy, and neuropathy","secondary_identifiers":["GARD:17479","MEDGEN:324411","MESH:C563702","OMIM:609541","UMLS:C1836010","DOID:0060491"],"synonyms":[{"name":"SPOAN","type":"exact"},{"name":"SPOAN syndrome","type":"exact"},{"name":"spastic paraplegia, optic atropy, and neuropathy syndrome","type":"exact"},{"name":"spastic paraplegia-optic atrophy-neuropathy syndrome","type":"exact"}],"termid":"MONDO:0012297","xrefs":{"Monarch":{"xref_id":"0012297"}}}


id: MOD:00184
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-3'-bromophenylalanine.","definition_xrefs":["PubMed:2076468","RESID:AA0175","PubMed:9033387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3'-bromophenylalanine","synonyms":[{"name":"(S)-2-amino-3-(3-bromophenyl)propanoic acid","type":"exact"},{"name":"3'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-3'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"m-bromophenylalanine","type":"exact"},{"name":"meta-bromophenylalanine","type":"exact"}],"termid":"MOD:00184"}


id: PBO:0041309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 49","termid":"PBO:0041309"}


id: PBO:0079272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39C pseudogene 1","termid":"PBO:0079272"}


id: PBO:0060028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 16","termid":"PBO:0060028"}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: MONDO:0016530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital malformation in the larynx. It is characterized by the presence of an air-filled sac within the laryngeal wall which may bulge on the neck.","definition_xrefs":["NCIT:C97062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngocele","secondary_identifiers":["icd11.foundation:360056769","MESH:D059608","MedDRA:10023885","Orphanet:2372","SCTID:51523009","UMLS:C0265761","GARD:3191","ICD10CM:Q31.3","ICD9:748.3","MEDGEN:452345"],"termid":"MONDO:0016530","xrefs":{"Monarch":{"xref_id":"0016530"}}}


id: GO:0043158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process by which a cell becomes a heterocyst, a cell that carries out nitrogen fixation. This process involves changes to the cell wall, expression of nitrogenase and other proteins involved in nitrogen fixation, and degradation of photosystem II, which produces oxygen. This process is known to occur in some cyanobacteria.","definition_xrefs":["PMID:35744626","PMID:11121783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heterocyst development","synonyms":[{"name":"heterocyst cell differentiation","type":"related"},{"name":"heterocyst differentiation","type":"related"},{"name":"heterocyst formation","type":"exact"}],"termid":"GO:0043158"}


id: FYPO:0001535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular zinc level","synonyms":[{"name":"normal cellular zinc accumulation","type":"related"},{"name":"normal cellular zinc ion level","type":"exact"},{"name":"normal cellular zinc level during mitotic cell cycle","type":"related"},{"name":"normal cellular zinc level during vegetative growth","type":"exact"}],"termid":"FYPO:0001535"}


id: PBO:0091449
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds S. pombe telomeric repeats with flexible sequence recognition requirements","termid":"PBO:0091449"}


id: PBO:0082954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic proteinase A (Pep4p) inhibitor; dependent on Pbs2p and Hog1p protein kinases for osmotic induction; intrinsically unstructured, N-terminal half becomes ordered in the active site of proteinase A upon contact","termid":"PBO:0082954"}


id: PBO:0056675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A","termid":"PBO:0056675"}


id: MONDO:0034989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic multiple congenital anomalies/dysmorphic syndrome characterized by intrauterine and postnatal growth restriction, global developmental delay, intellectual disability, and dysmorphic facial features (such as broad nasal root, anteverted nares, long philtrum, low-set and posteriorly rotated ears, and short neck). Additional reported manifestations are microcephaly, short stature, vertebral abnormalities, joint laxity, ocular, cardiac, and renal defects, and minor limb anomalies. Brain imaging may show hypoplastic corpus callosum, delayed myelination, and cerebral atrophy.","definition_xrefs":["Orphanet:508498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-cardiac anomalies-short stature-joint laxity syndrome","secondary_identifiers":["MEDGEN:1799995","UMLS:C5568572","GARD:17948"],"termid":"MONDO:0034989","xrefs":{"Monarch":{"xref_id":"0034989"}}}


id: GO:0036362
data:
  {"annotated_genes":["SJAG_02626","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118180,118549],"is_not":false,"summary":null,"term":"GO:0036362"}]},"cv_name":"cellular_component","definition":"A double layer of lipid molecules that surrounds an ascus, a capsule containing the sexual spores in some fungi.","definition_xrefs":["GOC:vw","PMID:21900489","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02626":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036362","terms_by_termid":{"GO:0036362":null}}


id: PBO:0027507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_acetone","termid":"PBO:0027507"}


id: PR:Q9P7Q8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmo25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mo25-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.06c","synonyms":[{"name":"Spom972h-pmo25","type":"exact"}],"termid":"PR:Q9P7Q8"}


id: GO:0033256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing an inhibitory-kappaB (I-kappaB/IKB) protein and one or more copies of an NF-kappaB protein. In the resting state, NF-kappaB dimers are bound to I-kappaB proteins, sequestering NF-kappaB in the cytoplasm.","definition_xrefs":["GOC:mah","GOC:bf","PMID:9407099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"I-kappaB/NF-kappaB complex","termid":"GO:0033256"}


id: PATO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence in which the emittence continues after the absorption has ceased.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorescence","termid":"PATO:0001298"}


id: GO:0044818
data:
  {"annotated_genes":["SJAG_00364","SJAG_01205","SJAG_02074","SJAG_02771","SJAG_01076","SJAG_04671","SJAG_01680","SJAG_03160","SJAG_01605","SJAG_03026","SJAG_03695","SJAG_04287","SJAG_02266","SJAG_01429","SJAG_01873","SJAG_01146","SJAG_00640","SJAG_01044","SJAG_01010","SJAG_05373","SJAG_03927","SJAG_03942","SJAG_02576","SJAG_02563","SJAG_02098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91789,71515,112424,79835,100903,116450,94324,99549,72825,79174,99716,106992,109697,75122,117496,117669,117195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[90567,99718,89477,101413,106993,79774,92153,118103,72823,100904,109698,91790,75616,112117,117409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A cell cycle checkpoint that detects and negatively regulates progression from G2 to M phase as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04287":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"mitotic G2/M transition checkpoint","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044818","terms_by_termid":{"GO:0007095":null,"GO:0033314":null}}


id: PBO:0088599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-Golgi network aminophospholipid translocase (flippase), Dnf1","termid":"PBO:0088599"}


id: PBO:0054140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1506","termid":"PBO:0054140"}


id: PBO:0043159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 27","termid":"PBO:0043159"}


id: GO:0035105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of a sterol regulatory element binding protein (SREBP) into the nucleus, across the nuclear membrane, in response to altered levels of one or more lipids. SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["PMID:12923525","GOC:vw","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element binding protein import into nucleus (obsolete GO:0035105)","synonyms":[{"name":"SREBP import into nucleus","type":"exact"},{"name":"SREBP import into nucleus involved in sterol depletion response","type":"exact"},{"name":"SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, SREBP import into nucleus","type":"exact"},{"name":"sterol depletion response, SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, sterol regulatory element binding protein import into nucleus","type":"exact"},{"name":"sterol depletion response, sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein import into nucleus involved in sterol depletion response","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation involved in sterol depletion response","type":"narrow"}],"termid":"GO:0035105"}


id: GO:0006148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inosine catabolic process","synonyms":[{"name":"inosine breakdown","type":"exact"},{"name":"inosine catabolism","type":"exact"},{"name":"inosine degradation","type":"exact"}],"termid":"GO:0006148"}


id: GO:0016408
data:
  {"annotated_genes":["SJAG_00413","SJAG_04107","SJAG_04972","SJAG_04178","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[58572,59952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004321"},{"annotations":[77226,79251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02305":null,"SJAG_04107":null,"SJAG_04178":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016408","terms_by_termid":{"GO:0003985":null,"GO:0004321":null,"GO:0004758":null}}


id: GO:0007436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland morphogenesis","termid":"GO:0007436"}


id: PBO:0064165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVC","termid":"PBO:0064165"}


id: GO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + trans-2-methyl-5-isopropylhexa-2,5-dienoic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity (obsolete GO:0018475)","termid":"GO:0018475"}


id: PBO:0032769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2, Ubc11/UbcP4","termid":"PBO:0032769"}


id: PBO:0079156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 15","termid":"PBO:0079156"}


id: FYPO:0004429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:19029336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle elongation","termid":"FYPO:0004396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal rate of mitotic spindle elongation","synonyms":[{"name":"normal mitotic spindle elongation rate","type":"exact"},{"name":"normal rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal rate of spindle elongation during mitosis","type":"exact"},{"name":"normal rate of spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004429"}


id: PBO:0059123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-P-dolichol utilization defect 1","termid":"PBO:0059123"}


id: GO:0032928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide anion generation","synonyms":[{"name":"regulation of superoxide release","type":"exact"}],"termid":"GO:0032928"}


id: PBO:0113021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of fatty acid synthetase; complex catalyzes the synthesis of long-chain saturated fatty acids; contains acetyltransacylase, dehydratase, enoyl reductase, malonyl transacylase, and palmitoyl transacylase activities; specific target of the broad-spectrum antifungal NPD6433","termid":"PBO:0113021"}


id: PBO:0050462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 3","termid":"PBO:0050462"}


id: PBO:0040648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 2B","termid":"PBO:0040648"}


id: GO:0043098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a purine deoxyribonucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}


id: GO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained to the new mitotic spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric protein localization to old or new spindle pole body","termid":"GO:0061492"},{"relation_name":"is_a","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"asymmetric protein localization to new mitotic spindle pole body","termid":"GO:0061510"}


id: PBO:0045269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 9","termid":"PBO:0045269"}


id: PBO:0083624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to regulate K63 polyubiquitination in response to oxidative stress and to monoubiquinate histone H2B-K123, which is required for the subsequent methylation of histone H3-K4 and H3-K79; required for DSBR, transcription, silencing, and checkpoint control; interacts with RNA-binding protein Npl3p, linking histone ubiquitination to mRNA processing; Bre1p-dependent histone ubiquitination promotes pre-mRNA splicing","termid":"PBO:0083624"}


id: GO:0060346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the bone. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"bone trabecula morphogenesis","termid":"GO:0061430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone trabecula formation","synonyms":[{"name":"bone trabecula biogenesis","type":"related"},{"name":"bone trabeculation","type":"exact"},{"name":"skeletal trabecula biogenesis","type":"related"},{"name":"skeletal trabecula formation","type":"exact"},{"name":"skeletal trabeculation","type":"exact"}],"termid":"GO:0060346"}


id: GO:0140822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-35 residue of the N-terminal tail of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:32822587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"NAD+-histone H2BE35 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E35 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E35 specific)","type":"exact"}],"termid":"GO:0140822"}


id: GO:0043513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-B subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"inhibin B complex","termid":"GO:0043513"}


id: GO:0009577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of an elaioplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"elaioplast","termid":"GO:0009545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"elaioplast stroma","termid":"GO:0009577"}


id: SO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where the data is minimally filtered or un-filtered, from any number of sequencing platforms, and is assembled into contigs. Genome sequence of this quality may harbour regions of poor quality and can be relatively incomplete.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"standard_draft","synonyms":[{"name":"standard draft","type":"exact"}],"termid":"SO:0001486"}


id: GO:0070806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of conidiophore development","termid":"GO:0070794"},{"relation_name":"is_a","term_name":"regulation of phialide development","termid":"GO:0070805"},{"relation_name":"negatively_regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phialide development","termid":"GO:0070806"}


id: MONDO:0018378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An area of necrotic bone in the mandible or maxilla.","definition_xrefs":["NCIT:C63924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis of the jaw","secondary_identifiers":["GARD:21663","ICD9:733.45","MEDGEN:751019","SCTID:441809006","UMLS:C2711248","Orphanet:399293"],"synonyms":[{"name":"ONJ","type":"exact"},{"name":"jaw osteonecrosis","type":"exact"},{"name":"osteonecrosis of jaw","type":"exact"}],"termid":"MONDO:0018378","xrefs":{"Monarch":{"xref_id":"0018378"}}}


id: SO:0000588
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self spliced intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autocatalytically_spliced_intron","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:autocatalytically_spliced_intron","type":"exact"},{"name":"autocatalytically spliced intron","type":"exact"}],"termid":"SO:0000588"}


id: GO:0031473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class III myosin; myosin III is monomeric and has an N terminal kinase domain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin III binding","termid":"GO:0031473"}


id: GO:0009784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of a membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:mah","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0038023","GO:0140096","GO:0016301","GO:0004672","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"transmembrane receptor histidine kinase activity","termid":"GO:0009784"}


id: PBO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase regulatory subunit Atg13","termid":"PBO:0002717"}


id: GO:0008765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate.","definition_xrefs":["EC:6.3.2.13","RHEA:23676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMURALGLDAPLIG-RXN","KEGG_REACTION:R02788"],"synonyms":[{"name":"MurE synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:(L)-meso-2,6-diaminoheptanedioate gamma-ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-2,6-diamino-heptanedioate ligase (ADP-forming) activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl-tripeptide synthetase activity","type":"related"}],"termid":"GO:0008765"}


id: GO:0072346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when cyclic adenosine diphosphate ribose (cADPR) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:11752598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cADPR-sensitive calcium-release channel activity","termid":"GO:0072346"}


id: PBO:0083728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane; involved in elongation of very long-chain fatty acids; evolutionarily conserved, similar to mammalian PTPLA and PTPLB; involved in sphingolipid biosynthesis and protein trafficking","termid":"PBO:0083728"}


id: PBO:0065004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 9","termid":"PBO:0065004"}


id: FYPO:0000716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to valinomycin. Cells stop growing (and may die) at a concentration of valinomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to valinomycin","synonyms":[{"name":"hypersensitive to valinomycin","type":"exact"},{"name":"sensitive to valinomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to valinomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000716"}


id: PBO:0031270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA","termid":"PBO:0031270"}


id: PBO:0053472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 440","termid":"PBO:0053472"}


id: PBO:0086369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aminopeptidase; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole","termid":"PBO:0086369"}


id: GO:0050610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + H+ + methylarsonate = glutathione disulfide + H2O + methylarsonous acid.","definition_xrefs":["EC:1.20.4.2","RHEA:15969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor","termid":"GO:0030614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methylarsonate reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0837","KEGG_REACTION:R05748","MetaCyc:1.20.4.2-RXN","Reactome:R-HSA-5696230"],"synonyms":[{"name":"MMA(V) reductase activity","type":"related"},{"name":"glutathione:methylarsonate oxidoreductase activity","type":"related"}],"termid":"GO:0050610"}


id: PBO:0088811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Sft2","termid":"PBO:0088811"}


id: PBO:0083136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity protein phosphatase; maintains low levels of both basal and induced cell integrity pathway signaling by dephosphorylation of the Slt2p MAPK; reciprocally regulated by Slt2p through phosphorylation; minor role with Ptp2p in the adaptive response to pheromone through the dephosphorylation of the Fus3p MAPK with major contribution by Ptp3p; inhibits the nuclear accumulation of Fus3p; two isoforms exist as the result of alternative translation initiation starts","termid":"PBO:0083136"}


id: GO:0034801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dinitrocyclohexanone + OH- = 4,6-dinitrohexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dinitrocyclohexanone hydrolase activity (obsolete GO:0034801)","termid":"GO:0034801"}


id: SO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_acetylation_site","synonyms":[{"name":"H3K27 acetylation site","type":"exact"},{"name":"H3K27ac","type":"exact"}],"termid":"SO:0002049"}


id: GO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["MetaCyc:RXN-10971","PMID:18981179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"inositol hexakisphosphate 3-kinase activity","termid":"GO:0052724"}


id: GO:0034268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin biosynthetic process","termid":"GO:0009691"},{"relation_name":"is_a","term_name":"discadenine metabolic process","termid":"GO:0034267"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"discadenine biosynthetic process","synonyms":[{"name":"discadenine anabolism","type":"exact"},{"name":"discadenine biosynthesis","type":"exact"},{"name":"discadenine formation","type":"exact"},{"name":"discadenine synthesis","type":"exact"}],"termid":"GO:0034268"}


id: PBO:0090077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate aminotransferase Caa1","termid":"PBO:0090077"}


id: PBO:0065615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A2 pseudogene 1","termid":"PBO:0065615"}


id: MONDO:0010755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux, X-linked","secondary_identifiers":["MEDGEN:374134","UMLS:C1839114","MESH:C564042","OMIM:314550"],"synonyms":[{"name":"VURX","type":"related"},{"name":"vesicoureteral reflux, X-linked","type":"exact"}],"termid":"MONDO:0010755","xrefs":{"Monarch":{"xref_id":"0010755"}}}


id: PR:P54069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha/beta hydrolase domain-containing protein 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bem46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.03","secondary_identifiers":["UniProtKB:P54069"],"synonyms":[{"name":"Spom972h-ABHD13","type":"exact"}],"termid":"PR:P54069"}


id: GO:0043377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043376"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of CD8-positive, alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043377"}


id: GO:0030247
data:
  {"annotated_genes":["SJAG_00981","SJAG_03535","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100518],"is_not":false,"summary":null,"term":"GO:0030247"},{"annotations":[60671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030248"},{"annotations":[118915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00981":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polysaccharide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0002506"],"synonyms":[{"name":"polysaccharide assembly with MHC class II protein complex","type":"narrow"}],"termid":"GO:0030247","terms_by_termid":{"GO:0030247":null,"GO:0030248":null,"GO:2001065":null}}


id: PBO:0082437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B subunit of DNA polymerase alpha-primase complex; required for initiation of DNA replication during mitotic and premeiotic DNA synthesis; also functions in telomere capping and length regulation","termid":"PBO:0082437"}


id: PBO:0011110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt6 binding correlates with that of RNAPII at the heterochromatin","termid":"PBO:0011110"}


id: GO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP+ = D-glyceraldehyde 3-phosphate + H+ + NADPH.","definition_xrefs":["RHEA:19773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glycerol-3-phosphate 1-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00845","EC:1.1.1.177","MetaCyc:1.1.1.177-RXN"],"synonyms":[{"name":"L-glycerol 3-phosphate:NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerin-3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerol phosphate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:NADP+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047014"}


id: PBO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 16","termid":"PBO:0072241"}


id: PBO:0076807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 5","termid":"PBO:0076807"}


id: MONDO:0008676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary mucosal leukokeratosis in which the cause of the disease is a mutation in the KRT4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mucosal leukokeratosis","termid":"MONDO:0015748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white sponge nevus 1","secondary_identifiers":["MEDGEN:860363","OMIM:193900","DOID:0081287","UMLS:C4011926"],"synonyms":[{"name":"KRT4 hereditary mucosal leukokeratosis","type":"exact"},{"name":"WHITE sponge NEVUS 1","type":"related"},{"name":"WSN1","type":"related"},{"name":"White sponge Nevus of Cannon","type":"related"},{"name":"White sponge Nevus type 1","type":"exact"},{"name":"hereditary mucosal leukokeratosis caused by mutation in KRT4","type":"exact"},{"name":"leukokeratosis, hereditary mucosal","type":"related"},{"name":"white sponge nevus 1","type":"exact"}],"termid":"MONDO:0008676","xrefs":{"Monarch":{"xref_id":"0008676"}}}


id: SO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region encoding an integrase which acts at a site adjacent to it (attI_site) to insert DNA which must include but is not limited to an attC_site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integron","secondary_identifiers":["http://en.wikipedia.org/wiki/Integron"],"termid":"SO:0000365"}


id: MONDO:0019997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare gastroenterologic disease (obsolete MONDO:0019997)","secondary_identifiers":["Orphanet:97935"],"termid":"MONDO:0019997","xrefs":{"Monarch":{"xref_id":"0019997"}}}


id: PBO:0078403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma locus","termid":"PBO:0078403"}


id: PBO:0061396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide A","termid":"PBO:0061396"}


id: MONDO:0020220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneoiridogoniodysgenesis (obsolete MONDO:0020220)","secondary_identifiers":["Orphanet:98636"],"termid":"MONDO:0020220","xrefs":{"Monarch":{"xref_id":"0020220"}}}


id: FYPO:0000394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1/S transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic G1/S phase transition","synonyms":[{"name":"abnormal G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle progression through the G1/S phase transition","type":"exact"},{"name":"abnormal mitotic G1/S cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G1/S phase transition","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: abnormal","type":"related"}],"termid":"FYPO:0000394"}


id: GO:0051625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of epinephrine into a cell, typically presynaptic neurons or glial cells. Epinephrine is a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"epinephrine uptake","synonyms":[{"name":"adrenaline reuptake","type":"exact"},{"name":"adrenaline uptake","type":"exact"},{"name":"epinephrine import","type":"exact"},{"name":"epinephrine reuptake","type":"exact"}],"termid":"GO:0051625"}


id: PBO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 19","termid":"PBO:0072490"}


id: GO:0044493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts the activity of a voltage-gated sodium channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","PMID:21781281","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of voltage-gated sodium channel activity","termid":"GO:0044492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated inhibition of voltage-gated sodium channel activity","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated sodium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044493"}


id: PBO:0081597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 3","termid":"PBO:0081597"}


id: PBO:0074411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 13","termid":"PBO:0074411"}


id: MONDO:1040017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal disorder characterized by an opening in the intestine to some epithelial surface.","definition_xrefs":["PMID:30480947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal fistula","secondary_identifiers":["MEDGEN:5862","UMLS:C0021833"],"termid":"MONDO:1040017","xrefs":{"Monarch":{"xref_id":"1040017"}}}


id: PBO:0063027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 7","termid":"PBO:0063027"}


id: FYPO:0008320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell morphology (i.e. the size, shape, or structure of the cell) is altered when the cell is subject to sulfur deprivation.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"abnormal cell morphology during sulphur deprivation","termid":"FYPO:0008320"}


id: PBO:0113450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; detects polyadenylation signal in nascent pre-mRNA and triggers 3' end formation of mRNA via cleavage and polyadenylation; binds pre-mRNA via zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; relocalizes to cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0113450"}


id: MONDO:1011719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal cobalamin (vitamin B12) malabsorption, non-human animal","secondary_identifiers":["OMIA:001791"],"termid":"MONDO:1011719","xrefs":{"Monarch":{"xref_id":"1011719"}}}


id: MONDO:0035375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"post-COVID-19 disorder","termid":"MONDO:0100320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multisystem inflammatory syndrome in children and adults","secondary_identifiers":["UMLS:C5680268","MEDGEN:1842571","GARD:22403","Orphanet:598363"],"synonyms":[{"name":"MIS-C/A","type":"exact"}],"termid":"MONDO:0035375","xrefs":{"Monarch":{"xref_id":"0035375"}}}


id: MONDO:1011005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukodystrophy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, non-human animal","termid":"MONDO:1010238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukodystrophy, dog","secondary_identifiers":["OMIA:001130-9615"],"termid":"MONDO:1011005","xrefs":{"Monarch":{"xref_id":"1011005"}}}


id: PBO:0049997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 3","termid":"PBO:0049997"}


id: PBO:0115011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein, unknown biological role Cmc4","termid":"PBO:0115011"}


id: FYPO:0003875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is elongated and inviable, and prior to death the cell undergoes a mitotic G2/M transition that begins later than normal, followed by cell cycle arrest in M phase.","definition_xrefs":["PMID:114458769","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mitotic G2/M phase transition delay","termid":"FYPO:0000012"},{"relation_name":"has_part","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"},{"relation_name":"is_a","term_name":"mitotic G2/M phase transition delay","termid":"FYPO:0000012"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0005447","FYPO:0000005","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated cell with mitotic G2/M transition delay and cell cycle arrest in M phase","synonyms":[{"name":"elongated inviable cell with mitotic G2/M transition delay and M phase arrest","type":"exact"},{"name":"elongated inviable cell with mitotic G2/M transition delay and cell cycle arrest in M phase","type":"exact"},{"name":"elongated inviable cell with mitotic G2/M transition delay and cell cycle arrest in M phase during vegetative growth","type":"exact"},{"name":"inviable elongated cell with G2/M transition delay and cell cycle arrest in M phase during mitotic cell cycle","type":"exact"},{"name":"inviable elongated cell with mitotic G2/M transition delay and M phase arrest","type":"exact"},{"name":"lethal; elongated cell with mitotic G2/M transition delay and cell cycle arrest in M phase","type":"exact"},{"name":"long inviable cell with mitotic G2/M transition delay and cell cycle arrest in M phase","type":"exact"}],"termid":"FYPO:0003875"}


id: GO:0031567
data:
  {"annotated_genes":["SJAG_04332","SJAG_01401","SJAG_02392","SJAG_03602","SJAG_03681","SJAG_01210","SJAG_04280","SJAG_03048","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102720,89299,116292,101983,109271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[96209,116396,94901,98785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0023052","GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072471"],"synonyms":[{"name":"mitotic cell cycle cell size control checkpoint","type":"related"},{"name":"mitotic cell size control checkpoint","type":"related"},{"name":"signal transduction involved in cell size control checkpoint","type":"related"}],"termid":"GO:0031567","terms_by_termid":{"GO:0031568":null,"GO:0031569":null}}


id: PBO:0058427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4797","termid":"PBO:0058427"}


id: MONDO:0005534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ileocolitis or ileal Crohn's is the most common type of Crohn's disease. It affects both the ileum (small intestine) and the colon.","definition_xrefs":["EFO:0005624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn ileitis","termid":"MONDO:0000709"},{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ileocolitis","secondary_identifiers":["DOID:0060190","MEDGEN:184943","MedDRA:10062647","NANDO:1200447","UMLS:C0949272"],"termid":"MONDO:0005534","xrefs":{"Monarch":{"xref_id":"0005534"}}}


id: PBO:0029337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation","termid":"PBO:0029337"}


id: PBO:0065863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB20, member RAS oncogene family","termid":"PBO:0065863"}


id: GO:0004129
data:
  {"annotated_genes":["SJAG_00976","SJAG_05629","SJAG_07007","SJAG_MIT20","SJAG_01355","SJAG_MIT13","SJAG_01077","SJAG_01190","SJAG_02504","SJAG_MIT04","SJAG_03337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74288,88550,89581,92311,108665,114617,115851,117212,119427,119449,119478],"is_not":false,"summary":null,"term":"GO:0004129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["RHEA:11436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0022857","GO:0005215","GO:0016491"],"is_obsolete":false,"name":"cytochrome-c oxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163214","EC:7.1.1.9","MetaCyc:CYTOCHROME-C-OXIDASE-RXN"],"synonyms":[{"name":"Warburg's respiratory enzyme activity","type":"related"},{"name":"aa3-type cytochrome c oxidase","type":"narrow"},{"name":"ba3-type cytochrome c oxidase","type":"narrow"},{"name":"caa3-type cytochrome c oxidase","type":"narrow"},{"name":"cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"cytochrome a3 activity","type":"narrow"},{"name":"cytochrome aa3 activity","type":"narrow"},{"name":"cytochrome c oxidase activity","type":"exact"},{"name":"cytochrome oxidase activity","type":"related"},{"name":"indophenol oxidase","type":"narrow"},{"name":"indophenolase","type":"narrow"}],"termid":"GO:0004129","terms_by_termid":{"GO:0004129":null}}


id: PBO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane translocase Oxa102","termid":"PBO:0004241"}


id: GO:0102681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n H2O + a glycogen = n a maltodextrin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isoamylase (maltodextrin-releasing) activity (obsolete GO:0102681)","termid":"GO:0102681"}


id: GO:0032386
data:
  {"annotated_genes":["SJAG_01166","SJAG_03453","SJAG_04312","SJAG_02592","SJAG_04597","SJAG_04343","SJAG_04509","SJAG_04464","SJAG_03048","SJAG_01245","SJAG_01805","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[94775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[100805,111400,102214,94168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[91207,94733,102746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[88247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[76998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[88251,92378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032386","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null,"GO:0060628":null,"GO:1902854":null,"GO:2001135":null}}


id: MONDO:1012124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hypotrophic axonopathy, non-human animal","termid":"MONDO:1011847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrophic axonopathy, Japanese quail","secondary_identifiers":["OMIA:000545-93934"],"termid":"MONDO:1012124","xrefs":{"Monarch":{"xref_id":"1012124"}}}


id: PBO:0079911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 1","termid":"PBO:0079911"}


id: MONDO:0027653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abacavir toxicity","secondary_identifiers":["Orphanet:240841"],"termid":"MONDO:0027653","xrefs":{"Monarch":{"xref_id":"0027653"}}}


id: PBO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SKN7","termid":"PBO:0015697"}


id: GO:0031500
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A high molecular weight complex characterized in S. pombe containing the cell-end anchoring protein Tea1. This complex is transported to the cell ends by microtubules and is involved in bipolar growth and the maintennce of normal cell polarity.","definition_xrefs":["PMID:15936270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"polarisome","termid":"GO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"Tea1 cell-end complex","termid":"GO:0031500"}


id: MONDO:0700224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the PDE6A gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PDE6A-related retinopathy","synonyms":[{"name":"PDE6A-related retinopathy","type":"exact"}],"termid":"MONDO:0700224","xrefs":{"Monarch":{"xref_id":"0700224"}}}


id: PBO:0062804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 3","termid":"PBO:0062804"}


id: PBO:0036047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036047"}


id: GO:0071910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the liver with respect to the left and right halves of the organism.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of liver left/right asymmetry","termid":"GO:0071910"}


id: MONDO:0006274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraepithelial lesion of the vulvar squamous epithelium that represents the clinical and morphological manifestation of a productive HPV infection. Low grade refers to the associated low risk of concurrent or future cancer. (WHO, 2014)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar intraepithelial neoplasia","termid":"MONDO:0005198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low grade vulvar intraepithelial neoplasia","secondary_identifiers":["UMLS:C0495106","MEDGEN:99217","NCIT:C4760","EFO:1000330"],"synonyms":[{"name":"VIN 1","type":"exact"},{"name":"VIN 1 of usual type","type":"exact"},{"name":"VIN grade 1","type":"exact"},{"name":"grade 1 VIN","type":"exact"},{"name":"grade 1 vulvar intraepithelial neoplasia","type":"exact"},{"name":"grade I VIN","type":"exact"},{"name":"grade I vulvar intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of the vulva grade 1","type":"exact"},{"name":"intraepithelial neoplasia of vulva grade 1","type":"exact"},{"name":"low grade VIN","type":"exact"},{"name":"vulva intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar Low grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar Low-grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar flat condyloma","type":"exact"},{"name":"vulvar intraepithelial neoplasia 1 of usual type","type":"exact"},{"name":"vulvar intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar mild squamous dysplasia","type":"exact"}],"termid":"MONDO:0006274","xrefs":{"Monarch":{"xref_id":"0006274"}}}


id: GO:0047115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol.","definition_xrefs":["MetaCyc:1.3.1.20-RXN","EC:1.3.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity","secondary_identifiers":["RHEA:16729"],"synonyms":[{"name":"dihydrodiol dehydrogenase activity","type":"related"},{"name":"trans-1,2-dihydrobenzene-1,2-diol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047115"}


id: PBO:0050790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3C2, pseudogene","termid":"PBO:0050790"}


id: GO:0036252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a menadione stimulus. Menadione (also called vitamin K3) is a naphthoquinone having a methyl substituent at the 2-position.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to menadione (obsolete GO:0036252)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter in response to menadione stress","type":"narrow"}],"termid":"GO:0036252"}


id: GO:0032892
data:
  {"annotated_genes":["SJAG_03591","SJAG_02605","SJAG_05346","SJAG_04920","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[93691,99236,92101,110924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[99237,93692,92102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organic acid transport","type":"narrow"},{"name":"stimulation of organic acid transport","type":"narrow"},{"name":"up regulation of organic acid transport","type":"exact"},{"name":"up-regulation of organic acid transport","type":"exact"},{"name":"upregulation of organic acid transport","type":"exact"}],"termid":"GO:0032892","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: PBO:0090911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0090911"}


id: GO:0043075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The nucleus of a plant pollen cell, the male gamete, and its descendents.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm cell nucleus (sensu Magnoliophyta) (obsolete GO:0043075)","synonyms":[{"name":"pollen germ cell nucleus","type":"exact"},{"name":"pollen germ-cell nucleus","type":"exact"},{"name":"sperm cell nucleus (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0043075"}


id: PBO:0078364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 8-2","termid":"PBO:0078364"}


id: PBO:0043153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 21","termid":"PBO:0043153"}


id: GO:0039704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral translation initiation mechanism where ribosomes are loaded onto viral mRNA at the 5'-cap structure and start scanning for a short distance before by-passing the large internal leader region and initiating at a downstream start site.","definition_xrefs":["VZ:608","PMID:18195037","PMID:15827182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational shunt","synonyms":[{"name":"ribosomal shunt initiation pathway","type":"exact"}],"termid":"GO:0039704"}


id: PBO:0061024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 7","termid":"PBO:0061024"}


id: PR:O13715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 5 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.08","synonyms":[{"name":"Spom972h-mug5","type":"exact"}],"termid":"PR:O13715"}


id: PBO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two MCB clusters regulate cell-cycle dependent cdc22+ transcription","termid":"PBO:0018254"}


id: PBO:0031156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_cell_cycle_phase","termid":"PBO:0031156"}


id: PBO:0049840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEATR3 antisense RNA 1","termid":"PBO:0049840"}


id: PBO:0116858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane-associated ribosome receptor Mdm38","termid":"PBO:0116858"}


id: FYPO:0008384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin localization at the nuclear periphery is decreased.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome region phenotype during vegetative growth","termid":"FYPO:0008382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased localization of chromatin region to nuclear periphery during vegetative growth","termid":"FYPO:0008384"}


id: PBO:0040562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GALNT2 pseudogene 1","termid":"PBO:0040562"}


id: PBO:0016051
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human cofactor E","termid":"PBO:0016051"}


id: PBO:0067347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 444, pseudogene","termid":"PBO:0067347"}


id: FYPO:0001631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular leucine level","termid":"FYPO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar leucine level","synonyms":[{"name":"normal level of leucine in vacuole","type":"exact"},{"name":"normal vacuolar L-leucine level","type":"exact"},{"name":"normal vacuolar leucine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar leucine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001631"}


id: GO:0097172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-acetylmuramic acid metabolic process","synonyms":[{"name":"N-acetylmuramate metabolic process","type":"exact"},{"name":"N-acetylmuramate metabolism","type":"exact"},{"name":"N-acetylmuramic acid metabolism","type":"exact"}],"termid":"GO:0097172"}


id: PBO:0057760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1973","termid":"PBO:0057760"}


id: GO:0150165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated inhibition of transcription by RNA polymerase II (obsolete GO:0150165)","termid":"GO:0150165"}


id: PBO:0005586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid12","termid":"PBO:0005586"}


id: MONDO:0003804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood protein disease (obsolete MONDO:0003804)","secondary_identifiers":["MESH:D001796","DOID:620"],"synonyms":[{"name":"Protein disorder, blood","type":"related"},{"name":"Protein disorders, blood","type":"related"},{"name":"blood Protein disorder","type":"related"},{"name":"blood protein disorder","type":"exact"},{"name":"disorder, blood Protein","type":"related"},{"name":"disorders, blood Protein","type":"related"}],"termid":"MONDO:0003804","xrefs":{"Monarch":{"xref_id":"0003804"}}}


id: PBO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF2","termid":"PBO:0016081"}


id: GO:1990139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nuclear periphery.","definition_xrefs":["GOC:mah","PMID:23703609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nuclear periphery","termid":"GO:1990139"}


id: PBO:0003293
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Srb9","termid":"PBO:0003293"}


id: FYPO:0004093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering is normal (i.e. indistinguishable from wild type). Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["GO:0045141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic telomere clustering","synonyms":[{"name":"normal bouquet formation","type":"exact"}],"termid":"FYPO:0004093"}


id: FYPO:0003506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on copper","synonyms":[{"name":"normal cell population growth in presence of copper","type":"exact"},{"name":"normal cell population growth on copper","type":"exact"},{"name":"normal cell population growth on copper ion","type":"exact"},{"name":"normal cellular response to copper","type":"related"},{"name":"normal growth on copper ions","type":"exact"},{"name":"normal vegetative cell population growth on copper","type":"exact"}],"termid":"FYPO:0003506"}


id: MONDO:0002757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute sanguinous otitis media caused by an allergen.","definition_xrefs":["DOID:3728","PMID:15301306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute sanguinous otitis media","termid":"MONDO:0002737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute allergic sanguinous otitis media","secondary_identifiers":["SCTID:17866004","ICD9:381.06","MEDGEN:509958","UMLS:C0155420"],"termid":"MONDO:0002757","xrefs":{"Monarch":{"xref_id":"0002757"}}}


id: GO:0033492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"esculetin metabolic process","synonyms":[{"name":"esculetin metabolism","type":"exact"}],"termid":"GO:0033492"}


id: PBO:0067059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 81, pseudogene","termid":"PBO:0067059"}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: PBO:0047993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member J, pseudogene","termid":"PBO:0047993"}


id: GO:0047392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + CMP-N-acylneuraminate = N-acylneuraminate + CMP.","definition_xrefs":["EC:3.1.4.40","MetaCyc:3.1.4.40-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"CMP-N-acylneuraminate phosphodiesterase activity","secondary_identifiers":["RHEA:20185"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydrolase activity","type":"related"},{"name":"CMP-N-acylneuraminate N-acylneuraminohydrolase activity","type":"related"},{"name":"CMP-N-acylneuraminic acid hydrolase activity","type":"related"},{"name":"CMP-sialate hydrolase activity","type":"related"},{"name":"CMP-sialic acid hydrolase activity","type":"related"},{"name":"cytidine monophosphate-N-acetylneuraminic acid hydrolase activity","type":"related"},{"name":"cytidine monophosphosialate hydrolase activity","type":"related"},{"name":"cytidine monophosphosialic hydrolase activity","type":"related"}],"termid":"GO:0047392"}


id: PBO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 2, pseudogene","termid":"PBO:0043049"}


id: GO:0072520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the seminiferous tubule over time, from its formation to the mature structure. Seminiferous tubules are ducts located in the testicles, and are the specific location of meiosis, and the subsequent creation of gametes, namely spermatozoa.","definition_xrefs":["GOC:BHF","GOC:mah","UBERON:0001343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminiferous tubule development","termid":"GO:0072520"}


id: GO:0036017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythropoietin stimulus. Erythropoietin is a glycoprotein hormone that controls erythropoiesis.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to erythropoietin","termid":"GO:0036017"}


id: MOD:01248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of iodouridine monophosphate with an L-tyrosine residue to form an ether linkage.","definition_xrefs":["PubMed:11567090","PubMed:11112526","PubMed:6540775","Unimod:292#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodouridine monophosphate derivatized residue","termid":"MOD:00611"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodouridine monophosphate derivatized tyrosine","synonyms":[{"name":"Cross-link of (Iodo)-uracil MP with W,F,Y","type":"related"},{"name":"IodoU-AMP","type":"related"}],"termid":"MOD:01248"}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: GO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trichloroethene + chloride + acceptor = tetrachloroethene + reduced acceptor. The reaction occurs in the reverse direction.","definition_xrefs":["RHEA:20353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tetrachloroethene reductive dehalogenase activity","secondary_identifiers":["MetaCyc:1.97.1.8-RXN","EC:1.21.99.5"],"synonyms":[{"name":"acceptor:trichloroethene oxidoreductase (chlorinating)","type":"related"},{"name":"tetrachloroethene reductase activity","type":"related"}],"termid":"GO:0050629"}


id: GO:0035783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment CD4-positive, alpha-beta T cell activation.","definition_xrefs":["CL:0000624","GOC:pr","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell costimulation","termid":"GO:0031295"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:0035783"}


id: MONDO:0004031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovary mixed epithelial carcinoma (obsolete MONDO:0004031)","termid":"MONDO:0004031","xrefs":{"Monarch":{"xref_id":"0004031"}}}


id: PBO:0042576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2B antisense RNA 1","termid":"PBO:0042576"}


id: GO:1905107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Dizocilpine stimulus.","definition_xrefs":["PMID:20064280","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to Dizocilpine (obsolete GO:1905107)","termid":"GO:1905107"}


id: PBO:0017607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit, WD repeat protein Swd22","termid":"PBO:0017607"}


id: MONDO:0011342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SLC35A1-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case by repeated hemorrhagic incidents, including severe pulmonary hemorrhage.","definition_xrefs":["Orphanet:238459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"SLC35A1-congenital disorder of glycosylation","secondary_identifiers":["UMLS:C1970344","GARD:12409","DOID:0070258","MEDGEN:370234","MESH:C567040","OMIM:603585","SCTID:723624008"],"synonyms":[{"name":"CDG IIf","type":"related"},{"name":"CDG syndrome type IIf","type":"exact"},{"name":"CDG-IIf","type":"exact"},{"name":"CDG2F","type":"exact"},{"name":"CMP-sialic acid transporter deficiency","type":"exact"},{"name":"SLC35A1-CDG","type":"exact"},{"name":"SLC35A1-CDG (CDG-IIf)","type":"related"},{"name":"SLC35A1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIf","type":"exact"},{"name":"congenital disorder of glycosylation type 2f","type":"exact"},{"name":"congenital disorder of glycosylation type IIf","type":"exact"},{"name":"congenital disorder of glycosylation, type IIf","type":"related"}],"termid":"MONDO:0011342","xrefs":{"Monarch":{"xref_id":"0011342"}}}


id: PBO:0112743
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yeast hsp78 and hsp104 are related to human CLBP at the C-term but have different N-terminal domains possibly due to some rearrangement in the metazoan lineage","termid":"PBO:0112743"}


id: GO:1902517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of glycerol-3-phosphate-transporting ATPase activity.","definition_xrefs":["PMID:23013274","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"glycerol-3-phosphate-transporting ATPase complex","termid":"GO:1902517"}


id: _global:precedes
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","secondary_identifiers":["BFO:0000063"],"termid":"_global:precedes"}


id: FYPO:0005557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin unloading is decreased during the mitotic cell cycle. Cohesin unloading is the topological unlinking of a cohesin ring complex from chromatin, which negatively regulates sister chromatid cohesion.","definition_xrefs":["PomBase:mah","GO:0061781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic cohesin unloading","synonyms":[{"name":"decreased cohesin unloading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin unloading during vegetative growth","type":"exact"},{"name":"reduced cohesin unloading","type":"exact"}],"termid":"FYPO:0005557"}


id: PBO:0051443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-29 (pseudogene)","termid":"PBO:0051443"}


id: PBO:0077026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated","termid":"PBO:0077026"}


id: MOD:01536
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01536"}


id: PBO:0088975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in translation or RNA processing, human TTC27 ortholog","termid":"PBO:0088975"}


id: PBO:0054063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1410","termid":"PBO:0054063"}


id: PBO:0039234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 3","termid":"PBO:0039234"}


id: MONDO:0014178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inclusion body myopathy with Paget disease of bone and frontotemporal dementia in which the cause of the disease is a mutation in the HNRNPA2B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","termid":"MONDO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0005336"],"is_obsolete":false,"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 2","secondary_identifiers":["OMIM:615422","GARD:15962","MEDGEN:815798","UMLS:C3809468","DOID:0111384"],"synonyms":[{"name":"HNRNPA2B1 inclusion body myopathy with Paget disease of bone and frontotemporal dementia","type":"exact"},{"name":"IBMPFD2","type":"related"},{"name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia caused by mutation in HNRNPA2B1","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 2","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia type 2","type":"exact"},{"name":"multisystem Proteinopathy 2","type":"related"}],"termid":"MONDO:0014178","xrefs":{"Monarch":{"xref_id":"0014178"}}}


id: PBO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with PIN3 cooperatively inhibits the nucleation of actin filaments; overexpression blocks receptor-mediated endocytosis; protein increases in abundance and forms nuclear foci in response to DNA replication stress; LSB1 has a paralog, PIN3, that arose from the whole genome duplication","termid":"PBO:0085002"}


id: PBO:0083193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene BUD5/YCR038C; identified by homology with hemiascomycetous yeast species","termid":"PBO:0083193"}


id: GO:0050654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chondroitin sulfate proteoglycans, which consist of a core protein linked to a chondroitin sulfate glycosaminoglycan. The chondroitin sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-glucuronic acid-beta-(1,3)-N-acetyl-D-galactosamine, the latter of which can be O-sulfated.","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate proteoglycan metabolism","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050654"}


id: MONDO:0007881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tooth agenesis in which the cause of the disease is a mutation in the WNT10A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"},{"relation_name":"is_a","term_name":"ectodermal dysplasia WNT10A related","termid":"MONDO:0100358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tooth agenesis, selective, 4","secondary_identifiers":["UMLS:C1835492","MEDGEN:372057","OMIM:150400","MESH:C563634","GARD:18245"],"synonyms":[{"name":"STHAG4","type":"related"},{"name":"WNT10A tooth agenesis","type":"exact"},{"name":"lateral incisors, absence of","type":"related"},{"name":"lateral incisors, pegged or missing","type":"related"},{"name":"succedaneous teeth, agenesis of","type":"related"},{"name":"tooth agenesis caused by mutation in WNT10A","type":"exact"},{"name":"tooth agenesis, selective, 4","type":"exact"},{"name":"tooth agenesis, selective, 4, with or without ectodermal dysplasia","type":"related"},{"name":"tooth agenesis, selective, type 4","type":"exact"}],"termid":"MONDO:0007881","xrefs":{"Monarch":{"xref_id":"0007881"}}}


id: PBO:0059362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 9","termid":"PBO:0059362"}


id: PBO:0054563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1965","termid":"PBO:0054563"}


id: PBO:0080600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 35","termid":"PBO:0080600"}


id: PBO:0064710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 46","termid":"PBO:0064710"}


id: PBO:0060221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 4","termid":"PBO:0060221"}


id: GO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a myeloid dendritic cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"},{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell activation involved in immune response","synonyms":[{"name":"myeloid dendritic cell activation during immune response","type":"related"}],"termid":"GO:0002277"}


id: GO:0170050
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex containing a box C/D type snoRNA and three (Archaea) or four (Eukaryotes) core proteins that is capable of methylation of target RNAs.","definition_xrefs":["PMID:30254138","PMID:28505386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D RNP complex","termid":"GO:0170049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"box C/D methylation guide RNP complex","termid":"GO:0170050"}


id: PBO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit","termid":"PBO:0090261"}


id: MONDO:0015976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyper-IgM syndrome without susceptibility to opportunistic infections (obsolete MONDO:0015976)","secondary_identifiers":["Orphanet:183666"],"synonyms":[{"name":"HIGM without susceptibility to opportunistic infections","type":"exact"}],"termid":"MONDO:0015976","xrefs":{"Monarch":{"xref_id":"0015976"}}}


id: SO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic sequence removed from the genome, as a normal event, by a process of recombination.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iDNA","synonyms":[{"name":"INSDC_feature:iDNA","type":"exact"},{"name":"intervening DNA","type":"exact"}],"termid":"SO:0000723"}


id: GO:0050057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + 2-hydroxy-2-methylpropanenitrile = UDP + linamarin.","definition_xrefs":["EC:2.4.1.63","MetaCyc:LINAMARIN-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"linamarin synthase activity","secondary_identifiers":["RHEA:20009"],"synonyms":[{"name":"UDP glucose ketone cyanohydrin glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:2-hydroxy-2-methylpropanenitrile beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:2-hydroxy-2-methylpropanenitrile beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:ketone cyanohydrin beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphate-glucose-ketone cyanohydrin beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-ketone cyanohydrin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-ketone glucosyltransferase activity","type":"related"}],"termid":"GO:0050057"}


id: GO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the presence of one nutrient source leads to a decrease in the frequency, rate, or extent of processes involved in the metabolism of other nutrient sources.","definition_xrefs":["PMID:29295552","GOC:dph","PMID:29197127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"negatively_regulates","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catabolite repression","termid":"GO:0061984"}


id: PBO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 4","termid":"PBO:0045170"}


id: PBO:0004654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mde2 protein","termid":"PBO:0004654"}


id: PBO:0086066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Sec72p and Hrr25p","termid":"PBO:0086066"}


id: FYPO:0000230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur normally, resulting in the formation of an abnormal actomyosin contractile ring in which actin is absent or mislocalized.","definition_xrefs":["GO:2000689","PMID:19713940","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"part_of","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"part_of","termid":"FYPO:0004803"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0004803","FYPO:0000032"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring actin filament organization","synonyms":[{"name":"abnormal actomyosin contractile ring actin filament organisation","type":"exact"},{"name":"abnormal actomyosin contractile ring actin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring actin filament organization during vegetative growth","type":"exact"},{"name":"abnormal cytokinetic contractile ring actin filament organization","type":"exact"},{"name":"abnormal mitotic contractile ring actin filament organization","type":"exact"}],"termid":"FYPO:0000230"}


id: GO:0052368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052368)","synonyms":[{"name":"catabolism of cellular component in other organism","type":"exact"},{"name":"catabolism of structural constituent in other organism","type":"exact"},{"name":"degradation of cellular component in other organism","type":"exact"},{"name":"disassembly by organism of cellular component in other organism during symbiotic interaction","type":"related"},{"name":"disassembly by organism of cellular component in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052368"}


id: MONDO:0019420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability, Pai type is characterized by the association of dysmorphism with intellectual deficit. It has been described in four generations of one family. Premature death was reported in the affected males. Transmission is X-linked recessive and the causative gene has been localized to the q28 region of the X chromosome.","definition_xrefs":["Orphanet:85322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Pai type","secondary_identifiers":["GARD:19056","MEDGEN:930695","UMLS:C4305026","SCTID:719011002"],"termid":"MONDO:0019420","xrefs":{"Monarch":{"xref_id":"0019420"}}}


id: PBO:0058502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-2","termid":"PBO:0058502"}


id: PR:O94603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.16c","synonyms":[{"name":"Spom972h-epe1","type":"exact"},{"name":"[Histone-H3]-lysine-36 demethylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heterochromatin-destabilizing protein epe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94603"}


id: PBO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 18, pseudogene","termid":"PBO:0070061"}


id: GO:2000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell migration","termid":"GO:2000406"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"positively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymocyte migration","synonyms":[{"name":"positive regulation of immature T cell migration","type":"related"},{"name":"positive regulation of immature T lymphocyte migration","type":"related"},{"name":"positive regulation of immature T-cell migration","type":"related"},{"name":"positive regulation of immature T-lymphocyte migration","type":"related"},{"name":"positive regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000412"}


id: MONDO:0956965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma SHH activated that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and the absence of TP53 mutations.","definition_xrefs":["DOID:0080705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma SHH activated","termid":"MONDO:0850197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated and TP53 wild-type","secondary_identifiers":["NCIT:C129443"],"termid":"MONDO:0956965","xrefs":{"Monarch":{"xref_id":"0956965"}}}


id: MONDO:0020610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, diego system (obsolete MONDO:0020610)","secondary_identifiers":["OMIM:110500"],"synonyms":[{"name":"BLOOD GROUP, DIEGO SYSTEM","type":"related"},{"name":"DI","type":"related"},{"name":"Diego Blood Group System","type":"related"},{"name":"blood group, Diego","type":"exact"}],"termid":"MONDO:0020610","xrefs":{"Monarch":{"xref_id":"0020610"}}}


id: MONDO:0700258
data:
  {"annotated_genes":["SJAG_01884"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"}]},"cv_name":"mondo","definition":"Any type 1 interferonopathies in which the cause of the disease is a variation in the RNASEH2C gene. Individuals with variants in RNASEH2C can present with a variety of phenotypes, including Aicardi-Goutieres syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01884":null},"genotype_count":0,"is_obsolete":false,"name":"RNASEH2C-related type 1 interferonopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700258","terms_by_termid":{"MONDO:0012471":null},"xrefs":{"Monarch":{"xref_id":"0700258"}}}


id: PBO:0039175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 7","termid":"PBO:0039175"}


id: PBO:0113550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, poorly characterised, conflicting annotations between species, implicated in ribosome associted, centrosome associated, gene expression","termid":"PBO:0113550"}


id: GO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the phloem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via phloem (obsolete GO:0023068)","synonyms":[{"name":"signal transmission via phloem","type":"exact"}],"termid":"GO:0023068"}


id: GO:0062099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["PMID:27258785","GOC:aruk","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"negatively_regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of programmed necrotic cell death","termid":"GO:0062099"}


id: MOD:00517
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"},{"name":"NeuAc-Hex-HexNAc","type":"exact"}],"termid":"MOD:00517"}


id: PBO:0068123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 430","termid":"PBO:0068123"}


id: GO:0010728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species biosynthetic process","termid":"GO:1903426"},{"relation_name":"regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010728"}


id: PR:Q9UUM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi1 gene.","definition_xrefs":["UniProtKB:Q9UUM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.06c","synonyms":[{"name":"Spom972h-swi1","type":"exact"},{"name":"replication fork protection complex subunit swi1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUM2"}


id: PBO:0109106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial UbiB/ABC kinase -like family family membrane protein contact site protein Cqd1","termid":"PBO:0109106"}


id: PBO:0043313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 2","termid":"PBO:0043313"}


id: PBO:0062981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoautosomal boundary region, X-linked","termid":"PBO:0062981"}


id: PR:Q9P7C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erj5 gene.","definition_xrefs":["UniProtKB:Q9P7C1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C2E1P5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.03","synonyms":[{"name":"Spom972h-erj5","type":"exact"}],"termid":"PR:Q9P7C1"}


id: MONDO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that is the result of a mutation on Chromosome 6 RAG1 gene involving genetic rearrangement of both the T- and B-lymphocyte receptor genes.","definition_xrefs":["DOID:0060011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recombinase activating gene 1 deficiency","synonyms":[{"name":"recombinase activating gene 1 deficiency","type":"exact"}],"termid":"MONDO:0000572","xrefs":{"Monarch":{"xref_id":"0000572"}}}


id: GO:0003163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sinoatrial (SA) node over time, from its formation to the mature structure. The SA node is part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"},{"relation_name":"part_of","term_name":"cardiac conduction system development","termid":"GO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial node development","synonyms":[{"name":"SA node development","type":"exact"},{"name":"SAN development","type":"exact"},{"name":"sinus node development","type":"narrow"}],"termid":"GO:0003163"}


id: PBO:0073894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A9 antisense RNA 1","termid":"PBO:0073894"}


id: MONDO:0013693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neonatal inflammatory skin and bowel disease in which the cause of the disease is a mutation in the ADAM17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal inflammatory skin and bowel disease","termid":"MONDO:0017411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory skin and bowel disease, neonatal, 1","secondary_identifiers":["OMIM:614328","UMLS:C3280501","GARD:18429","MEDGEN:482131"],"synonyms":[{"name":"ADAM17 neonatal inflammatory skin and bowel disease","type":"exact"},{"name":"NISBD1","type":"related"},{"name":"inflammatory skin and bowel disease, neonatal, 1","type":"exact"},{"name":"inflammatory skin and bowel disease, neonatal, type 1","type":"exact"},{"name":"neonatal inflammatory skin and bowel disease caused by mutation in ADAM17","type":"exact"}],"termid":"MONDO:0013693","xrefs":{"Monarch":{"xref_id":"0013693"}}}


id: GO:0032328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alanine, 2-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alanine transport","termid":"GO:0032328"}


id: GO:0010033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.","definition_xrefs":["PMID:23356676","GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete response to organic substance (obsolete GO:0010033)","synonyms":[{"name":"process resulting in tolerance to organic substance","type":"narrow"}],"termid":"GO:0010033"}


id: PR:O74412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbf12 gene.","definition_xrefs":["UniProtKB:O74412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor cbf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.13","synonyms":[{"name":"C-promoter element-binding factor-like protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cbf12","type":"exact"}],"termid":"PR:O74412"}


id: PBO:0071805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2","termid":"PBO:0071805"}


id: FYPO:0002467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore morphology","termid":"FYPO:0000348"},{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spore shape","termid":"FYPO:0002467"}


id: PBO:0062506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily H member 1","termid":"PBO:0062506"}


id: PR:O74559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04340","PANTHER:PTHR23427:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.06","secondary_identifiers":["UniProtKB:O74559"],"synonyms":[{"name":"Spom972h-SURF4","type":"exact"}],"termid":"PR:O74559"}


id: PBO:0078520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 10","termid":"PBO:0078520"}


id: SO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short hairpin RNA (shRNA) is an RNA transcript that makes a tight hairpin turn that can be used to silence target gene expression via RNA interference.","definition_xrefs":["PMID:6699500","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA","secondary_identifiers":["http:http\\:en.wikipedia.org/wiki/Small_hairpin_RNA"],"synonyms":[{"name":"short hairpin RNA","type":"exact"},{"name":"small hairpin RNA","type":"exact"}],"termid":"SO:0002031"}


id: PBO:0055642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3081","termid":"PBO:0055642"}


id: PBO:0045935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1 pseudogene 2","termid":"PBO:0045935"}


id: PBO:0031591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_process","termid":"PBO:0031591"}


id: PBO:0027321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_NADH_to_ubiquinone","termid":"PBO:0027321"}


id: GO:1900655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of diorcinol biosynthetic process","synonyms":[{"name":"regulation of diorcinol anabolism","type":"exact"},{"name":"regulation of diorcinol biosynthesis","type":"exact"},{"name":"regulation of diorcinol formation","type":"exact"},{"name":"regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900655"}


id: MONDO:0005795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histoplasmosis (obsolete MONDO:0005795)","termid":"MONDO:0005795","xrefs":{"Monarch":{"xref_id":"0005795"}}}


id: PBO:0009107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I core factor complex subunit Rrn7","termid":"PBO:0009107"}


id: PBO:0055942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 51","termid":"PBO:0055942"}


id: PBO:0079875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 2","termid":"PBO:0079875"}


id: FYPO:0001640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular leucine level","synonyms":[{"name":"normal cellular L-leucine level","type":"exact"},{"name":"normal cellular leucine level during mitotic cell cycle","type":"related"},{"name":"normal cellular leucine level during vegetative growth","type":"exact"},{"name":"normal level of leucine in cell","type":"exact"}],"termid":"FYPO:0001640"}


id: GO:0030674
data:
  {"annotated_genes":["SJAG_03417","SJAG_04076","SJAG_01403","SJAG_02332","SJAG_00087","SJAG_00032","SJAG_03668","SJAG_03264","SJAG_01564","SJAG_04370","SJAG_01728","SJAG_01916","SJAG_02621","SJAG_01617","SJAG_03267","SJAG_02831","SJAG_04763","SJAG_01711","SJAG_04607","SJAG_03924","SJAG_01772","SJAG_01068","SJAG_02927","SJAG_02409","SJAG_02103","SJAG_02398","SJAG_04513","SJAG_05203","SJAG_04884","SJAG_01873","SJAG_01738","SJAG_03916","SJAG_00115","SJAG_02874","SJAG_01686","SJAG_04253","SJAG_05341","SJAG_01748","SJAG_04768","SJAG_03449","SJAG_02849","SJAG_04647","SJAG_03673","SJAG_03535","SJAG_02240","SJAG_01111","SJAG_03942","SJAG_02541","SJAG_01249","SJAG_01178","SJAG_03602","SJAG_01638","SJAG_03981","SJAG_02204","SJAG_04558","SJAG_02500","SJAG_04690","SJAG_00800","SJAG_02196","SJAG_03643","SJAG_00809","SJAG_04186","SJAG_00262","SJAG_04455","SJAG_02699","SJAG_02805","SJAG_00584","SJAG_04274","SJAG_01047","SJAG_03681","SJAG_06382","SJAG_04640","SJAG_03116","SJAG_01188","SJAG_01157","SJAG_04099","SJAG_03081","SJAG_02773","SJAG_04389","SJAG_02688","SJAG_04077","SJAG_04503","SJAG_03627","SJAG_03596","SJAG_04959","SJAG_05950","SJAG_00831","SJAG_03441","SJAG_03377","SJAG_00826","SJAG_05179","SJAG_03543","SJAG_02045","SJAG_02795","SJAG_03200","SJAG_03218","SJAG_03776","SJAG_00794","SJAG_03629","SJAG_03023","SJAG_00053","SJAG_00207","SJAG_01199","SJAG_00266","SJAG_00030","SJAG_04035","SJAG_02453","SJAG_05273","SJAG_04930","SJAG_03464","SJAG_00108","SJAG_00557","SJAG_04978","SJAG_03527","SJAG_04755","SJAG_04142","SJAG_02255","SJAG_02622","SJAG_00448","SJAG_05153","SJAG_06638","SJAG_03146","SJAG_03710","SJAG_02458","SJAG_01377","SJAG_02701","SJAG_00453","SJAG_03573","SJAG_04739","SJAG_04609","SJAG_04621","SJAG_05226","SJAG_02494","SJAG_05011","SJAG_01167","SJAG_03564","SJAG_04701","SJAG_00804","SJAG_04498","SJAG_00171","SJAG_05206","SJAG_01205","SJAG_00335","SJAG_04966","SJAG_02074","SJAG_04205","SJAG_03622","SJAG_00184","SJAG_01952","SJAG_04623","SJAG_03882","SJAG_03941","SJAG_03230","SJAG_00164","SJAG_02394","SJAG_04381","SJAG_00656","SJAG_02753","SJAG_04942","SJAG_00269","SJAG_01794","SJAG_03287","SJAG_02474","SJAG_03342","SJAG_00943","SJAG_00354","SJAG_03465","SJAG_00342","SJAG_05260","SJAG_04509","SJAG_03542","SJAG_00209","SJAG_00303","SJAG_02391","SJAG_00317","SJAG_00336","SJAG_02162","SJAG_04886","SJAG_04909","SJAG_04613","SJAG_00441","SJAG_03625","SJAG_05315","SJAG_04991","SJAG_00156","SJAG_01073","SJAG_02822","SJAG_02401","SJAG_00368","SJAG_04413","SJAG_01324","SJAG_03726","SJAG_05286","SJAG_02551","SJAG_01009","SJAG_01464","SJAG_00079","SJAG_04023","SJAG_01605","SJAG_00290","SJAG_00029","SJAG_04565","SJAG_04921","SJAG_03989","SJAG_00899","SJAG_02846","SJAG_04705","SJAG_01713","SJAG_03404","SJAG_04466","SJAG_04601","SJAG_00185","SJAG_02671","SJAG_00640","SJAG_03217","SJAG_00297","SJAG_04396","SJAG_00302","SJAG_04931","SJAG_04574","SJAG_03170","SJAG_01475","SJAG_02737","SJAG_02165","SJAG_02241","SJAG_01783","SJAG_03664","SJAG_04051","SJAG_00904","SJAG_01778","SJAG_01658","SJAG_00803","SJAG_03752","SJAG_00613","SJAG_01804","SJAG_01745","SJAG_04820","SJAG_03599","SJAG_03044","SJAG_04508","SJAG_02511","SJAG_03651","SJAG_01876","SJAG_02097","SJAG_04671","SJAG_02215","SJAG_01305","SJAG_03107","SJAG_02066","SJAG_03845","SJAG_00213","SJAG_00646","SJAG_02513","SJAG_03435","SJAG_03905","SJAG_05196","SJAG_01771","SJAG_00152","SJAG_01263","SJAG_01926","SJAG_00192","SJAG_04417","SJAG_00651","SJAG_03103","SJAG_03211","SJAG_01809","SJAG_00397","SJAG_01196","SJAG_03552","SJAG_07018","SJAG_03089","SJAG_04100","SJAG_00117","SJAG_03851","SJAG_03416","SJAG_00822","SJAG_01113","SJAG_02098","SJAG_04315","SJAG_01022","SJAG_02591","SJAG_02651","SJAG_01437","SJAG_03005","SJAG_02079","SJAG_05000","SJAG_03590","SJAG_00909","SJAG_03536","SJAG_00104","SJAG_02586","SJAG_01193","SJAG_03123","SJAG_04213","SJAG_04666","SJAG_00521","SJAG_02789","SJAG_01258","SJAG_03945","SJAG_00641","SJAG_02385","SJAG_03347","SJAG_03792","SJAG_02329","SJAG_04479","SJAG_04932","SJAG_04259","SJAG_03628","SJAG_02990","SJAG_02246","SJAG_00112","SJAG_00379","SJAG_03920","SJAG_04943","SJAG_01392","SJAG_00268","SJAG_01143","SJAG_04963","SJAG_01601","SJAG_03848","SJAG_00861","SJAG_00545","SJAG_01509","SJAG_04821","SJAG_01456","SJAG_00700","SJAG_03867"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66222,72230,72259,73296,73824,75462,76869,77152,78771,78876,78978,79057,79238,79540,79676,80164,80171,80545,87754,87850,89684,90138,91034,92569,93029,95167,96544,96833,97925,100280,100289,101300,102275,102878,104086,106093,107112,108995,111417,112559,112583,113465,113570,114062,116296,118132,118495,118837,118960,119264],"is_not":false,"summary":null,"term":"GO:0030674"},{"annotations":[106405,111075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140312"},{"annotations":[91707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140449"},{"annotations":[112973,119247,92154,115109,112574,93191,88396,118104,89718,108075,88220,88514,94309,114959,115690,108354,103692,113018,113365,112972,113017,115472,118112,111608,111878,112123,100094,113620,112971,113016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140463"},{"annotations":[74721,96492,78463,72431,89264,111889,94551,78106,62262,108719,58347,113179,78125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035615"},{"annotations":[98390,99648,105022,91750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008093"},{"annotations":[99685,103331,112699,102785,114337,92952,103106,112258,117341,117428,106969,113161,106579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106006"},{"annotations":[99760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[104744,90771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160214"},{"annotations":[118914,102122,101463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140767"},{"annotations":[103969,91711,119769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"},{"annotations":[106146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140002"},{"annotations":[99263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140008"},{"annotations":[108301,109701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140005"},{"annotations":[108302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990889"},{"annotations":[97578,94315,61589,99491,105090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140566"},{"annotations":[114177,110290,105852,95677,102800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140483"},{"annotations":[70614,100335,117766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005078"},{"annotations":[94992,118861,107065,114436,119075,119344,106502,102152,117153,103861,106295,113588,111249,115694,80684,105509,97814,73216,95850,95791,99038,99808,104138,98791,102870,73486,109627,107271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043495"},{"annotations":[112074,88358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990644"},{"annotations":[90327,114926,60779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"},{"annotations":[91264,107896,106226,108025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140474"},{"annotations":[106970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140443"},{"annotations":[109600,105950,91751,92915,93193,103275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140693"},{"annotations":[118520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990247"},{"annotations":[104666,108474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140517"},{"annotations":[100827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160134"},{"annotations":[107694,97586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180014"},{"annotations":[107471,94304,99553,89601,114178,76250,88257,74545,112866,111826,93206,117526,92793,98793,99728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035591"},{"annotations":[75674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030159"},{"annotations":[119021,69331,60728,90930,94257,96662,98456,99877,76570,76937,113079,73127,117948,110037,72398,78373,78079,74259,76526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005484"},{"annotations":[76751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005483"},{"annotations":[110554,100220,98633,101352,103416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140475"},{"annotations":[113233,80699,103186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106166"},{"annotations":[106337,117952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140473"},{"annotations":[117960,78006,99654,75982,93857,94450,102319,104040,113366,106147,62184,119492,77496,119491,119328,73687,96521,112142,72002,109105,99384,118007,95744,89470,94812,78632,100855,103782,107703,99033,103982,109131,98935,75678,88849,108615,107107,94705,103536,106750,106614,91038,103226,103733,89642,95449,114699,107433,107790,115124,98181,62300,107280,91777,78960,75312,90724,112687,96223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003713"},{"annotations":[77711,77129,78245,79957,96253,72281,78158,89151,78442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003712"},{"annotations":[107108,93566,107378,70527,91615,99245,104562,112482,104622,73618,93604,97573,79482,104322,74031,75727,104683,109727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003714"},{"annotations":[109470,101836,116187,107579,116041,98133,105246,111421,99996,117145,117245,104961,107599,98815,95903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990756"},{"annotations":[110886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061649"}]},"cv_name":"molecular_function","definition":"An adaptor activity that brings together two or more macromolecules in contact, permitting those molecules to function in a coordinated way. The adaptor can bring together two proteins, or a protein and another macromolecule such as a lipid or a nucleic acid.","definition_xrefs":["GOC:vw","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular adaptor activity","termid":"GO:0060090"}],"gene_count":327,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00030":null,"SJAG_00032":null,"SJAG_00053":null,"SJAG_00079":null,"SJAG_00087":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00112":null,"SJAG_00115":null,"SJAG_00117":null,"SJAG_00152":null,"SJAG_00156":null,"SJAG_00164":null,"SJAG_00171":null,"SJAG_00184":null,"SJAG_00185":null,"SJAG_00192":null,"SJAG_00207":null,"SJAG_00209":null,"SJAG_00213":null,"SJAG_00262":null,"SJAG_00266":null,"SJAG_00268":null,"SJAG_00269":null,"SJAG_00290":null,"SJAG_00297":null,"SJAG_00302":null,"SJAG_00303":null,"SJAG_00317":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_00342":null,"SJAG_00354":null,"SJAG_00368":null,"SJAG_00379":null,"SJAG_00397":null,"SJAG_00441":null,"SJAG_00448":null,"SJAG_00453":null,"SJAG_00521":null,"SJAG_00545":null,"SJAG_00557":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00640":null,"SJAG_00641":null,"SJAG_00646":null,"SJAG_00651":null,"SJAG_00656":null,"SJAG_00700":null,"SJAG_00794":null,"SJAG_00800":null,"SJAG_00803":null,"SJAG_00804":null,"SJAG_00809":null,"SJAG_00822":null,"SJAG_00826":null,"SJAG_00831":null,"SJAG_00861":null,"SJAG_00899":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00943":null,"SJAG_01009":null,"SJAG_01022":null,"SJAG_01047":null,"SJAG_01068":null,"SJAG_01073":null,"SJAG_01111":null,"SJAG_01113":null,"SJAG_01143":null,"SJAG_01157":null,"SJAG_01167":null,"SJAG_01178":null,"SJAG_01188":null,"SJAG_01193":null,"SJAG_01196":null,"SJAG_01199":null,"SJAG_01205":null,"SJAG_01249":null,"SJAG_01258":null,"SJAG_01263":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01377":null,"SJAG_01392":null,"SJAG_01403":null,"SJAG_01437":null,"SJAG_01456":null,"SJAG_01464":null,"SJAG_01475":null,"SJAG_01509":null,"SJAG_01564":null,"SJAG_01601":null,"SJAG_01605":null,"SJAG_01617":null,"SJAG_01638":null,"SJAG_01658":null,"SJAG_01686":null,"SJAG_01711":null,"SJAG_01713":null,"SJAG_01728":null,"SJAG_01738":null,"SJAG_01745":null,"SJAG_01748":null,"SJAG_01771":null,"SJAG_01772":null,"SJAG_01778":null,"SJAG_01783":null,"SJAG_01794":null,"SJAG_01804":null,"SJAG_01809":null,"SJAG_01873":null,"SJAG_01876":null,"SJAG_01916":null,"SJAG_01926":null,"SJAG_01952":null,"SJAG_02045":null,"SJAG_02066":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02097":null,"SJAG_02098":null,"SJAG_02103":null,"SJAG_02162":null,"SJAG_02165":null,"SJAG_02196":null,"SJAG_02204":null,"SJAG_02215":null,"SJAG_02240":null,"SJAG_02241":null,"SJAG_02246":null,"SJAG_02255":null,"SJAG_02329":null,"SJAG_02332":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02394":null,"SJAG_02398":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02453":null,"SJAG_02458":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02511":null,"SJAG_02513":null,"SJAG_02541":null,"SJAG_02551":null,"SJAG_02586":null,"SJAG_02591":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02651":null,"SJAG_02671":null,"SJAG_02688":null,"SJAG_02699":null,"SJAG_02701":null,"SJAG_02737":null,"SJAG_02753":null,"SJAG_02773":null,"SJAG_02789":null,"SJAG_02795":null,"SJAG_02805":null,"SJAG_02822":null,"SJAG_02831":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02874":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03005":null,"SJAG_03023":null,"SJAG_03044":null,"SJAG_03081":null,"SJAG_03089":null,"SJAG_03103":null,"SJAG_03107":null,"SJAG_03116":null,"SJAG_03123":null,"SJAG_03146":null,"SJAG_03170":null,"SJAG_03200":null,"SJAG_03211":null,"SJAG_03217":null,"SJAG_03218":null,"SJAG_03230":null,"SJAG_03264":null,"SJAG_03267":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03347":null,"SJAG_03377":null,"SJAG_03404":null,"SJAG_03416":null,"SJAG_03417":null,"SJAG_03435":null,"SJAG_03441":null,"SJAG_03449":null,"SJAG_03464":null,"SJAG_03465":null,"SJAG_03527":null,"SJAG_03535":null,"SJAG_03536":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03552":null,"SJAG_03564":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03596":null,"SJAG_03599":null,"SJAG_03602":null,"SJAG_03622":null,"SJAG_03625":null,"SJAG_03627":null,"SJAG_03628":null,"SJAG_03629":null,"SJAG_03643":null,"SJAG_03651":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03673":null,"SJAG_03681":null,"SJAG_03710":null,"SJAG_03726":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_03845":null,"SJAG_03848":null,"SJAG_03851":null,"SJAG_03867":null,"SJAG_03882":null,"SJAG_03905":null,"SJAG_03916":null,"SJAG_03920":null,"SJAG_03924":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03981":null,"SJAG_03989":null,"SJAG_04023":null,"SJAG_04035":null,"SJAG_04051":null,"SJAG_04076":null,"SJAG_04077":null,"SJAG_04099":null,"SJAG_04100":null,"SJAG_04142":null,"SJAG_04186":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04253":null,"SJAG_04259":null,"SJAG_04274":null,"SJAG_04315":null,"SJAG_04370":null,"SJAG_04381":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04455":null,"SJAG_04466":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04503":null,"SJAG_04508":null,"SJAG_04509":null,"SJAG_04513":null,"SJAG_04558":null,"SJAG_04565":null,"SJAG_04574":null,"SJAG_04601":null,"SJAG_04607":null,"SJAG_04609":null,"SJAG_04613":null,"SJAG_04621":null,"SJAG_04623":null,"SJAG_04640":null,"SJAG_04647":null,"SJAG_04666":null,"SJAG_04671":null,"SJAG_04690":null,"SJAG_04701":null,"SJAG_04705":null,"SJAG_04739":null,"SJAG_04755":null,"SJAG_04763":null,"SJAG_04768":null,"SJAG_04820":null,"SJAG_04821":null,"SJAG_04884":null,"SJAG_04886":null,"SJAG_04909":null,"SJAG_04921":null,"SJAG_04930":null,"SJAG_04931":null,"SJAG_04932":null,"SJAG_04942":null,"SJAG_04943":null,"SJAG_04959":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05011":null,"SJAG_05153":null,"SJAG_05179":null,"SJAG_05196":null,"SJAG_05203":null,"SJAG_05206":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05273":null,"SJAG_05286":null,"SJAG_05315":null,"SJAG_05341":null,"SJAG_05950":null,"SJAG_06382":null,"SJAG_06638":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674"],"is_obsolete":false,"name":"protein-macromolecule adaptor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:24184107":null},"synonyms":[{"name":"protein binding, bridging","type":"exact"},{"name":"protein complex scaffold activity","type":"broad"},{"name":"protein recruiting activity","type":"related"},{"name":"protein-containing complex scaffold activity","type":"broad"},{"name":"protein-protein adaptor","type":"narrow"}],"termid":"GO:0030674","terms_by_termid":{"GO:0003712":null,"GO:0003713":null,"GO:0003714":null,"GO:0005078":null,"GO:0005483":null,"GO:0005484":null,"GO:0008093":null,"GO:0030159":null,"GO:0030674":null,"GO:0035591":null,"GO:0035615":null,"GO:0043495":null,"GO:0061649":null,"GO:0062239":null,"GO:0106006":null,"GO:0106166":null,"GO:0140002":null,"GO:0140005":null,"GO:0140008":null,"GO:0140312":null,"GO:0140443":null,"GO:0140449":null,"GO:0140463":null,"GO:0140473":null,"GO:0140474":null,"GO:0140475":null,"GO:0140483":null,"GO:0140506":null,"GO:0140517":null,"GO:0140566":null,"GO:0140580":null,"GO:0140693":null,"GO:0140767":null,"GO:0160134":null,"GO:0160214":null,"GO:0180014":null,"GO:1990247":null,"GO:1990644":null,"GO:1990756":null,"GO:1990889":null}}


id: MONDO:0014198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the FBXL4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, encephalomyopathic form","termid":"MONDO:0016796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 13","secondary_identifiers":["SCTID:765403009","DOID:0080131","UMLS:C3809592","NCIT:C172095","Orphanet:369897","MEDGEN:815922","GARD:13298","OMIM:615471"],"synonyms":[{"name":"BXL4-related early-onset mitochondrial encephalopathy","type":"related"},{"name":"FBXL4 deficiency","type":"related"},{"name":"FBXL4 mitochondrial DNA depletion syndrome","type":"exact"},{"name":"FBXL4-related encephalomyopathic mitochondrial DNA depletion syndrome","type":"related"},{"name":"MTDPS13","type":"related"},{"name":"encephalomyopathic mitochondrial DNA depletion syndrome-13","type":"related"},{"name":"mitochondrial DNA depletion syndrome 13 (encephalomyopathic type)","type":"related"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in FBXL4","type":"exact"},{"name":"mitochondrial DNA depletion syndrome type 13","type":"exact"},{"name":"mitochondrial DNA depletion syndrome, encephalomyopathic form with variable craniofacial anomalies","type":"related"},{"name":"mtDNA depletion syndrome, encephalomyopathic form with variable craniofacial anomalies","type":"exact"}],"termid":"MONDO:0014198","xrefs":{"Monarch":{"xref_id":"0014198"}}}


id: PBO:0089090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1","termid":"PBO:0089090"}


id: MONDO:0006947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High blood pressure secondary to renal artery stenosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypertension","termid":"MONDO:0001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renovascular hypertension","secondary_identifiers":["ICD9:405.91","DOID:1591","ICD10CM:I15.0","SCTID:123799005","EFO:1001153","HP:0100817","NANDO:2100016","NANDO:2200141","MEDGEN:43786","UMLS:C0020545"],"synonyms":[{"name":"renovascular hypertension","type":"exact"},{"name":"renovascular hypertension (disease)","type":"exact"}],"termid":"MONDO:0006947","xrefs":{"Monarch":{"xref_id":"0006947"}}}


id: MONDO:0030907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 106","secondary_identifiers":["OMIM:300997","DOID:0080240","MEDGEN:1389156","UMLS:C4478379"],"synonyms":[{"name":"MRX106","type":"related"},{"name":"X-linked intellectual disability 106","type":"related"},{"name":"X-linked mental retardation 106","type":"related"},{"name":"intellectual developmental disorder, X-linked 106, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 106","type":"exact"},{"name":"mental retardation, X-linked 106","type":"related"}],"termid":"MONDO:0030907","xrefs":{"Monarch":{"xref_id":"0030907"}}}


id: PBO:0065682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin synthase","termid":"PBO:0065682"}


id: GO:2000221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pseudohyphal growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070785"},{"relation_name":"is_a","term_name":"regulation of pseudohyphal growth","termid":"GO:2000220"},{"relation_name":"negatively_regulates","term_name":"pseudohyphal growth","termid":"GO:0007124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pseudohyphal growth","termid":"GO:2000221"}


id: CHEBI:15741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinic acid","termid":"CHEBI:15741"}


id: PBO:0090965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1","termid":"PBO:0090965"}


id: PBO:0047745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 9","termid":"PBO:0047745"}


id: PBO:0055222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2648","termid":"PBO:0055222"}


id: GO:0045779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone resorption.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone resorption","termid":"GO:0045124"},{"relation_name":"is_a","term_name":"negative regulation of bone remodeling","termid":"GO:0046851"},{"relation_name":"negatively_regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone resorption","synonyms":[{"name":"down regulation of bone resorption","type":"exact"},{"name":"down-regulation of bone resorption","type":"exact"},{"name":"downregulation of bone resorption","type":"exact"},{"name":"inhibition of bone resorption","type":"narrow"}],"termid":"GO:0045779"}


id: PBO:0067984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 286","termid":"PBO:0067984"}


id: PBO:0091993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane leucine transmembrane transporter Agp3","termid":"PBO:0091993"}


id: PBO:0039480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A3, pseudogene","termid":"PBO:0039480"}


id: RO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y).","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_during_or_after","termid":"RO:0002496"}


id: GO:0044845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Extension of the O-linked mannose residue of a mannoprotein by the stepwise addition of further mannose molecules.","definition_xrefs":["GOC:jl","PMID:19429925"],"gene_count":0,"genotype_count":0,"name":"obsolete chain elongation of O-linked mannose residue (obsolete GO:0044845)","termid":"GO:0044845"}


id: GO:0097352
data:
  {"annotated_genes":["SJAG_02414","SJAG_06309","SJAG_03345","SJAG_02699","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70953,72690,75869],"is_not":false,"summary":null,"term":"GO:0097352"},{"annotations":[94988],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[97982],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Removal of PI3P and Atg8/LC3 after the closure of the phagophore and before the fusion with the endosome/lysosome (e.g. mammals and insects) or vacuole (yeast), and that very likely destabilizes other Atg proteins and thus enables their efficient dissociation and recycling.","definition_xrefs":["GOC:lf","GOC:autophagy","PMID:28077293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02414":null,"SJAG_02433":null,"SJAG_02699":null,"SJAG_03345":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"autophagosome maturation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000046"],"synonyms":[{"name":"autophagic vacuole fusion","type":"exact"},{"name":"autophagic vacuole maturation","type":"exact"},{"name":"autophagosome fusion","type":"related"}],"termid":"GO:0097352","terms_by_termid":{"GO:0016240":null,"GO:0097352":null,"GO:1901098":null}}


id: MONDO:0009192
data:
  {"annotated_genes":["SJAG_00690","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86055,86056],"is_not":false,"summary":null,"term":"MONDO:0009192"}]},"cv_name":"mondo","definition":"Wolcott-Rallison syndrome (WRS) is a very rare genetic disease, characterized by permanent neonatal diabetes mellitus (PNDM) with multiple epiphyseal dysplasia and other clinical manifestations, including recurrent episodes of acute liver failure.","definition_xrefs":["Orphanet:1667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Wolcott-Rallison syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536739","GARD:5589","DOID:0090060","MEDGEN:140926","SCTID:254066006","NCIT:C131007","icd11.foundation:2096915129","OMIM:226980","UMLS:C0432217"],"synonyms":[{"name":"IDDM-MED syndrome","type":"related"},{"name":"Iddm-Med syndrome","type":"related"},{"name":"MED-IDDM syndrome","type":"related"},{"name":"Med-Iddm syndrome","type":"related"},{"name":"WRS","type":"exact"},{"name":"Wolcott Rallison syndrome","type":"related"},{"name":"Wolcott-Rallison syndrome","type":"exact"},{"name":"early-onset diabetes mellitus with multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple with early-onset diabetes mellitus","type":"related"},{"name":"epiphyseal dysplasia, multiple, with early-onset diabetes mellitus","type":"related"}],"termid":"MONDO:0009192","terms_by_termid":{"MONDO:0009192":null},"xrefs":{"Monarch":{"xref_id":"0009192"}}}


id: PBO:0090866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane fission complex, WD repeat subunit Mdv1","termid":"PBO:0090866"}


id: PBO:0091999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1 Rpp103","termid":"PBO:0091999"}


id: MONDO:0014532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"metabolic myopathy","termid":"MONDO:0020123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant mitochondrial myopathy with exercise intolerance","secondary_identifiers":["Orphanet:457050","MEDGEN:863950","OMIM:616209","DOID:0081357","GARD:17794","UMLS:C4015513"],"synonyms":[{"name":"IMMD","type":"related"},{"name":"myopathy, isolated mitochondrial, autosomal dominant","type":"related"}],"termid":"MONDO:0014532","xrefs":{"Monarch":{"xref_id":"0014532"}}}


id: PBO:0113402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; induces superficial pseudohyphal growth, positively regulates invasive growth, but is not required for invasive pseudohyphal growth; may act together with Phd1p; promotes cell adhesion independent of Flo11p by repressing genes that encode cell wall degrading enzymes; localizes to the nucleus; potential Cdc28p substrate","termid":"PBO:0113402"}


id: GO:1902690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:19846558","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"is_a","term_name":"regulation of NAD metabolic process","termid":"GO:1902688"},{"relation_name":"positively_regulates","term_name":"NAD+ metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD metabolic process","synonyms":[{"name":"activation of NAD (oxidized) metabolic process","type":"narrow"},{"name":"activation of NAD (oxidized) metabolism","type":"narrow"},{"name":"activation of NAD metabolic process","type":"narrow"},{"name":"activation of NAD metabolism","type":"narrow"},{"name":"activation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"activation of nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"activation of nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"activation of oxidized NAD metabolic process","type":"narrow"},{"name":"activation of oxidized NAD metabolism","type":"narrow"},{"name":"activation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"activation of oxidized nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"positive regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"positive regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"positive regulation of NAD metabolism","type":"exact"},{"name":"positive regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"positive regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"positive regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"positive regulation of oxidized NAD metabolic process","type":"exact"},{"name":"positive regulation of oxidized NAD metabolism","type":"exact"},{"name":"positive regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"positive regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"up regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"up regulation of NAD metabolic process","type":"exact"},{"name":"up regulation of NAD metabolism","type":"exact"},{"name":"up regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"up regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up regulation of oxidized NAD metabolic process","type":"exact"},{"name":"up regulation of oxidized NAD metabolism","type":"exact"},{"name":"up regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up-regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"up-regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"up-regulation of NAD metabolic process","type":"exact"},{"name":"up-regulation of NAD metabolism","type":"exact"},{"name":"up-regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"up-regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up-regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up-regulation of oxidized NAD metabolic process","type":"exact"},{"name":"up-regulation of oxidized NAD metabolism","type":"exact"},{"name":"up-regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up-regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"upregulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"upregulation of NAD (oxidized) metabolism","type":"exact"},{"name":"upregulation of NAD metabolic process","type":"exact"},{"name":"upregulation of NAD metabolism","type":"exact"},{"name":"upregulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"upregulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"upregulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"upregulation of oxidized NAD metabolic process","type":"exact"},{"name":"upregulation of oxidized NAD metabolism","type":"exact"},{"name":"upregulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"upregulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902690"}


id: GO:2000521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"is_a","term_name":"regulation of immunological synapse formation","termid":"GO:2000520"},{"relation_name":"negatively_regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immunological synapse formation","synonyms":[{"name":"negative regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000521"}


id: GO:1905432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","PMID:19448629","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905432"}


id: MONDO:0006505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathological condition caused by impaired blood flow in the basal regions of cerebral hemispheres (basal ganglia), such as infarction; hemorrhage; or ischemia in vessels of this brain region including the lateral lenticulostriate arteries. Primary clinical manifestations include involuntary movements (dyskinesias) and muscle weakness (hemiparesis).","definition_xrefs":["MESH:D020144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal ganglia disorder","termid":"MONDO:0003996"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal ganglia cerebrovascular disorder","secondary_identifiers":["UMLS:C0751739","MEDGEN:148381","DOID:10991","EFO:1000640"],"synonyms":[{"name":"cerebrovascular disorder of collection of basal ganglia","type":"exact"},{"name":"collection of basal ganglia cerebrovascular disorder","type":"exact"}],"termid":"MONDO:0006505","xrefs":{"Monarch":{"xref_id":"0006505"}}}


id: PR:O94387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl8 gene.","definition_xrefs":["UniProtKB:O94387","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C29A10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.10c","synonyms":[{"name":"Spom972h-dbl8","type":"exact"}],"termid":"PR:O94387"}


id: PBO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_disassembly_of","termid":"PBO:0034113"}


id: FYPO:0004920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a catalytic activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of molecular function","termid":"FYPO:0004919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal regulation of catalytic activity","synonyms":[{"name":"normal regulation of catalytic activity during mitotic cell cycle","type":"related"},{"name":"normal regulation of catalytic activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004920"}


id: MONDO:0032886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Liang-Wang syndrome","secondary_identifiers":["Orphanet:664438","OMIM:618729","MEDGEN:1684847","UMLS:C5231479"],"synonyms":[{"name":"LIANG-WANG SYNDROME","type":"related"},{"name":"LIWAS","type":"related"}],"termid":"MONDO:0032886","xrefs":{"Monarch":{"xref_id":"0032886"}}}


id: GO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfopropanediol(1-).","definition_xrefs":["GOC:dph","PMID:14602517","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to 3-sulfopropanediol(1-)","secondary_identifiers":["MetaCyc:PWY-7446"],"termid":"GO:0061721"}


id: GO:0051443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of ubiquitin transferase activity.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC activation","type":"narrow"},{"name":"APC activator","type":"narrow"},{"name":"SCF complex activator","type":"narrow"},{"name":"activation of ubiquitin transferase activity","type":"narrow"},{"name":"anaphase promoting complex activator","type":"narrow"},{"name":"anaphase-promoting complex activator","type":"narrow"},{"name":"positive regulation of ubiquitin transferase activity","type":"exact"},{"name":"stimulation of ubiquitin transferase activity","type":"narrow"},{"name":"ubiquitin transferase activator","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity","type":"related"},{"name":"up-regulation of ubiquitin transferase activity","type":"exact"},{"name":"upregulation of ubiquitin transferase activity","type":"exact"}],"termid":"GO:0051443"}


id: PBO:0026665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026665"}


id: PBO:0027381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution","termid":"PBO:0027381"}


id: MONDO:0003740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overwhelming, irrational, and persistent fear of contracting Acquired Immune Deficiency Syndrome.","definition_xrefs":["NCIT:C35614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nosophobia","termid":"MONDO:0000600"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDS phobia","secondary_identifiers":["DOID:603","UMLS:C0853870","MEDGEN:167692"],"synonyms":[{"name":"AIDS phobia","type":"exact"}],"termid":"MONDO:0003740","xrefs":{"Monarch":{"xref_id":"0003740"}}}


id: PBO:0050965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon nu 1, pseudogene","termid":"PBO:0050965"}


id: PATO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000699 glutinous (obsolete PATO:0000699)","termid":"PATO:0000699"}


id: PBO:0038976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADPGK antisense RNA 1","termid":"PBO:0038976"}


id: GO:0010715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix disassembly","synonyms":[{"name":"regulation of extracellular matrix breakdown","type":"exact"},{"name":"regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010715"}


id: PBO:0088159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Voltage-gated high-affinity calcium channel; involved in calcium influx in response to some environmental stresses as well as exposure to mating pheromones; interacts and partially co-localizes with Mid1p; however, evidence suggests CCH1 is not required for Mid1p function","termid":"PBO:0088159"}


id: MONDO:0008705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"lysosomal acid phosphatase deficiency","secondary_identifiers":["UMLS:C0268410","MESH:C562645","ICD10CM:E83.3","ICD9:277.6","MEDGEN:78674","Orphanet:35121","OMIM:200950","GARD:16636","SCTID:57863006"],"synonyms":[{"name":"acid phosphatase deficiency","type":"exact"},{"name":"lysosomal acid phosphatase deficiency","type":"exact"}],"termid":"MONDO:0008705","xrefs":{"Monarch":{"xref_id":"0008705"}}}


id: PBO:0066410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT like 2","termid":"PBO:0066410"}


id: GO:1902730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23212449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"positively_regulates","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteoglycan biosynthetic process","synonyms":[{"name":"activation of proteoglycan anabolism","type":"narrow"},{"name":"activation of proteoglycan biosynthesis","type":"narrow"},{"name":"activation of proteoglycan biosynthetic process","type":"narrow"},{"name":"activation of proteoglycan formation","type":"narrow"},{"name":"activation of proteoglycan synthesis","type":"narrow"},{"name":"positive regulation of proteoglycan anabolism","type":"exact"},{"name":"positive regulation of proteoglycan biosynthesis","type":"exact"},{"name":"positive regulation of proteoglycan formation","type":"exact"},{"name":"positive regulation of proteoglycan synthesis","type":"exact"},{"name":"up regulation of proteoglycan anabolism","type":"exact"},{"name":"up regulation of proteoglycan biosynthesis","type":"exact"},{"name":"up regulation of proteoglycan biosynthetic process","type":"exact"},{"name":"up regulation of proteoglycan formation","type":"exact"},{"name":"up regulation of proteoglycan synthesis","type":"exact"},{"name":"up-regulation of proteoglycan anabolism","type":"exact"},{"name":"up-regulation of proteoglycan biosynthesis","type":"exact"},{"name":"up-regulation of proteoglycan biosynthetic process","type":"exact"},{"name":"up-regulation of proteoglycan formation","type":"exact"},{"name":"up-regulation of proteoglycan synthesis","type":"exact"},{"name":"upregulation of proteoglycan anabolism","type":"exact"},{"name":"upregulation of proteoglycan biosynthesis","type":"exact"},{"name":"upregulation of proteoglycan biosynthetic process","type":"exact"},{"name":"upregulation of proteoglycan formation","type":"exact"},{"name":"upregulation of proteoglycan synthesis","type":"exact"}],"termid":"GO:1902730"}


id: GO:0048477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:pr","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"is_a","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oogenesis","secondary_identifiers":["GO:0048157","Wikipedia:Oogenesis","GO:0009993"],"synonyms":[{"name":"ovum development","type":"exact"}],"termid":"GO:0048477"}


id: PR:O59741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.05","synonyms":[{"name":"Spom972h-prt1","type":"exact"}],"termid":"PR:O59741"}


id: MONDO:0032830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snijders blok-fisher syndrome","secondary_identifiers":["OMIM:618604","Orphanet:656135","MEDGEN:1684801","UMLS:C5231424"],"synonyms":[{"name":"SNIBFIS","type":"related"},{"name":"SNIJDERS BLOK-FISHER SYNDROME","type":"related"}],"termid":"MONDO:0032830","xrefs":{"Monarch":{"xref_id":"0032830"}}}


id: PBO:0053349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 239","termid":"PBO:0053349"}


id: MONDO:0021187
data:
  {"annotated_genes":["SJAG_04785","SJAG_01072","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86866,86865,86867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperlipidemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E78.5","HP:0003077","ICD9:272.4","MESH:D006949","SCTID:55822004","UMLS:C0020473","MEDGEN:5692"],"synonyms":[{"name":"hyperlipemia","type":"related"},{"name":"hyperlipemias","type":"related"},{"name":"hyperlipidemia","type":"exact"},{"name":"hyperlipidemia (disease)","type":"exact"},{"name":"lipemia","type":"related"},{"name":"lipemias","type":"related"},{"name":"lipidemia","type":"related"},{"name":"lipidemias","type":"related"}],"termid":"MONDO:0021187","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0021187"}}}


id: PBO:0017691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1 (predicted)","termid":"PBO:0017691"}


id: PBO:0018247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein (Meakin) Moa1","termid":"PBO:0018247"}


id: MONDO:0011938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the GATA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"},{"relation_name":"is_a","term_name":"structural congenital heart disease, multiple types - GATA4","termid":"MONDO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 2","secondary_identifiers":["UMLS:C1842778","OMIM:607941","DOID:0110107","MEDGEN:334249","MESH:C538263"],"synonyms":[{"name":"ASD2","type":"exact"},{"name":"GATA4 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in GATA4","type":"exact"},{"name":"atrial heart septal defect type 2","type":"exact"},{"name":"atrial septal defect 2","type":"exact"},{"name":"atrial septal defect type 2","type":"exact"}],"termid":"MONDO:0011938","xrefs":{"Monarch":{"xref_id":"0011938"}}}


id: SO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_member","termid":"SO:0005848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_array_member","synonyms":[{"name":"cassette array member","type":"exact"}],"termid":"SO:0005847"}


id: PBO:0087827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) largest subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP74","termid":"PBO:0087827"}


id: PBO:0053181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens epithelial protein","termid":"PBO:0053181"}


id: PBO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CuSE 5'-[ACT]T[ACT]NNGCTG[AGT]-3'","termid":"PBO:0000339"}


id: FYPO:0001889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell","synonyms":[{"name":"transcripts absent from cell","type":"exact"},{"name":"undetectable cellular RNA level","type":"exact"}],"termid":"FYPO:0001889"}


id: PBO:0090390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5-thioadenosine phosphorylase Mta1","termid":"PBO:0090390"}


id: MONDO:1010875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease characterised by impaired unesterified cholesterol and sphingomyelin transport and metabolism, resulting in the accumulation of un-esterified cholesterol and glycosphingolipids within late endosomes and lysosomes that occurs in cattle due to a mutation in the NPC1 gene. Affected animals present with hepatosplenomegaly, neurological degeneration and premature death.","definition_xrefs":["PMID:32970694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease, NPC1-related, cattle","secondary_identifiers":["OMIA:000725-9913"],"synonyms":[{"name":"Niemann-Pick disease, type C1, cattle","type":"related"}],"termid":"MONDO:1010875","xrefs":{"Monarch":{"xref_id":"1010875"}}}


id: MONDO:1012061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatosis vegetans, non-human animal","termid":"MONDO:1011736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatosis vegetans, pig","secondary_identifiers":["OMIA:000271-9823"],"termid":"MONDO:1012061","xrefs":{"Monarch":{"xref_id":"1012061"}}}


id: PBO:0045693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 1","termid":"PBO:0045693"}


id: PBO:0068348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 125","termid":"PBO:0068348"}


id: PBO:0113074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of the TIM23 protein translocase complex; couples Tim21 with the core Tim23 translocase; provides quality control for membrane protein insertion, regulating their release into the inner membrane by the TIM23 complex; required for mitochondrial import of presequence-containing proteins at elevated temperature; forms the translocation path with Tim17p, sealing the lateral opening of the Tim17p cavity; required for viability of cells lacking the mitochondrial genome (petite-negative)","termid":"PBO:0113074"}


id: PBO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit","termid":"PBO:0090413"}


id: PBO:0074864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49B","termid":"PBO:0074864"}


id: PBO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec5 (predicted)","termid":"PBO:0005489"}


id: PBO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocalcin delta","termid":"PBO:0060591"}


id: PBO:0070807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 37","termid":"PBO:0070807"}


id: GO:0002828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type 2 immune response","synonyms":[{"name":"regulation of T-helper 2 type immune response","type":"narrow"},{"name":"regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002828"}


id: MONDO:0002616
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the mesenchyma-derived cells of the soft tissue or bone. Representative examples include lipoma, leiomyoma, leiomyosarcoma and osteosarcoma.","definition_xrefs":["NCIT:C7059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"mesenchymal cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1334699","DOID:3350","MEDGEN:277359"],"synonyms":[{"name":"benign miscellaneous mesenchymal tumor","type":"exact"},{"name":"benign miscellaneous mesenchymal tumour","type":"exact"},{"name":"mesenchymal cell neoplasm","type":"exact"},{"name":"mesenchymal cell tumor","type":"exact"},{"name":"mesenchymal cell tumour","type":"exact"},{"name":"mesenchymal neoplasm","type":"exact"},{"name":"mesenchymal tumor","type":"exact"},{"name":"mesenchymal tumour","type":"exact"}],"termid":"MONDO:0002616","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0002616"}}}


id: MONDO:0008003
data:
  {"annotated_genes":["SJAG_00885","SJAG_02050","SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[85527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"}]},"cv_name":"mondo","definition":"Autosomal dominant form of progressive external ophthalmoplegia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0004069","MONDO:0005066","MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant progressive external ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16486","UMLS:C5231255","MEDGEN:1686757","Orphanet:254892","MESH:C563575"],"synonyms":[{"name":"PEOA1","type":"related"},{"name":"adPEO","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 1","type":"related"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant type 1","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant","type":"exact"}],"termid":"MONDO:0008003","terms_by_termid":{"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0024528":null},"xrefs":{"Monarch":{"xref_id":"0008003"}}}


id: PBO:0060890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NETO1 divergent transcript","termid":"PBO:0060890"}


id: GO:0099069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a synaptic vesicle membrane and a the preseynaptic membrane active zone. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. This process is distinct from and prior to synaptic vesicle priming and fusion.","definition_xrefs":["GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"synaptic vesicle docking","termid":"GO:0016081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0023052","GO:0140056"],"is_obsolete":false,"name":"synaptic vesicle tethering involved in synaptic vesicle exocytosis","termid":"GO:0099069"}


id: PBO:0065973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 homolog B","termid":"PBO:0065973"}


id: MONDO:0957577
data:
  {"annotated_genes":["SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86743],"is_not":false,"summary":null,"term":"MONDO:0957577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"variegate porphyria","termid":"MONDO:0008297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019142","MONDO:0005093","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"variegate porphyria, childhood-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1849794","UMLS:C5882681","OMIM:620483"],"termid":"MONDO:0957577","terms_by_termid":{"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0957577"}}}


id: PBO:0080195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 3","termid":"PBO:0080195"}


id: GO:0140068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + histone = CoA + crotonyl-histone.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide crotonyltransferase activity","termid":"GO:0140064"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone crotonyltransferase activity","termid":"GO:0140068"}


id: MONDO:0009239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FSHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 24 without anosmia","secondary_identifiers":["SCTID:758664007","GARD:10128","MESH:C537070","OMIM:229070","DOID:0090088","UMLS:C5574957","MEDGEN:1806136","Orphanet:52901"],"synonyms":[{"name":"FSHB hypogonadotropic hypogonadism","type":"exact"},{"name":"HH24","type":"related"},{"name":"follicle-stimulating hormone deficiency, isolated","type":"related"},{"name":"hypogonadotropic hypogonadism 24 without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FSHB","type":"exact"},{"name":"isolated FSH deficiency","type":"exact"},{"name":"isolated follicle stimulating hormone deficiency","type":"related"},{"name":"isolated follicle-stimulating hormone (FSH) deficiency","type":"related"},{"name":"isolated follicle-stimulating hormone deficiency","type":"exact"}],"termid":"MONDO:0009239","xrefs":{"Monarch":{"xref_id":"0009239"}}}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:12175151","PubMed:15189151","PubMed:11857757","Unimod:65#K","PubMed:11344537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: MONDO:0013433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary sclerosing cholangitis (PSC) is a rare, slowly progressive liver disease characterized by inflammation and destruction of the intra- and/or extra-hepatic bile ducts that lead to cholestasis, liver fibrosis, liver cirrhosis and ultimately liver failure.","definition_xrefs":["Orphanet:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"primary sclerosing cholangitis","secondary_identifiers":["DOID:0060643","NORD:1613","OMIM:613806","NANDO:1200440","MedDRA:10036732","SCTID:197441003","UMLS:C0566602","NANDO:2100265","icd11.foundation:857962451","MEDGEN:107565","GARD:1280"],"synonyms":[{"name":"PSC","type":"exact"},{"name":"cholangitis, primary sclerosing","type":"related"}],"termid":"MONDO:0013433","xrefs":{"Monarch":{"xref_id":"0013433"}}}


id: PBO:0086214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to DNA mismatches; forms heterodimers with Msh3p and Msh6p that bind to DNA mismatches to initiate the mismatch repair process; contains a Walker ATP-binding motif required for repair activity and involved in interstrand cross-link repair; Msh2p-Msh6p binds to and hydrolyzes ATP; required for silencing at the silent mating-type loci and telomeres","termid":"PBO:0086214"}


id: GO:0016779
data:
  {"annotated_genes":["SJAG_01704","SJAG_01562","SJAG_03921","SJAG_00890","SJAG_01713","SJAG_03475","SJAG_03761","SJAG_04877","SJAG_04994","SJAG_00119","SJAG_03181","SJAG_03144","SJAG_01313","SJAG_00153","SJAG_03468","SJAG_04161","SJAG_03896","SJAG_00619","SJAG_02954","SJAG_04700","SJAG_02383","SJAG_00731","SJAG_01765","SJAG_00797","SJAG_02506","SJAG_02658","SJAG_02725","SJAG_04408","SJAG_02288","SJAG_05197","SJAG_03035","SJAG_02818","SJAG_05979","SJAG_01444","SJAG_04628","SJAG_00637","SJAG_00458","SJAG_04791","SJAG_03932","SJAG_01500","SJAG_05239","SJAG_04089","SJAG_04934","SJAG_01352","SJAG_03257","SJAG_02908","SJAG_00399","SJAG_04030","SJAG_00814","SJAG_01443","SJAG_03356","SJAG_03563","SJAG_02653","SJAG_04233","SJAG_00946","SJAG_04261","SJAG_03188","SJAG_02627","SJAG_02101","SJAG_00611","SJAG_02070","SJAG_04894","SJAG_02720","SJAG_02370","SJAG_00426","SJAG_03906","SJAG_01302","SJAG_03014","SJAG_02600","SJAG_04106","SJAG_01724","SJAG_03578","SJAG_02889","SJAG_01937","SJAG_01176","SJAG_04946","SJAG_01089","SJAG_02178","SJAG_16460","SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62176,66539],"is_not":false,"summary":null,"term":"GO:0016779"},{"annotations":[62307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070566"},{"annotations":[70672,75304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052929"},{"annotations":[97364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141192"},{"annotations":[70671,75303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052927"},{"annotations":[70275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004105"},{"annotations":[70831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017125"},{"annotations":[95605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034061"},{"annotations":[74552,75372,75225,103194,75396,77261,78069,73642,78338,103245,58240,70829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003887"},{"annotations":[64076,101871,110163,58604,58505,57282,96239,101911,109659,62437,77805,103322,67375,65908,102899,58828,57737,105705,116065,116845,56992,117159,63578,65658,61171,105257,65233,79331,63817,112772,61241,64427,64242,62685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003899"},{"annotations":[75749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004306"},{"annotations":[78947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003919"},{"annotations":[68207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061710"},{"annotations":[105610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016979"},{"annotations":[75844,103453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004475"},{"annotations":[75906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[75117,71079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000309"},{"annotations":[75119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004515"},{"annotations":[120010,80433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004605"},{"annotations":[78579,69318,59228,69453,79365,96613,64146,76742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990817"},{"annotations":[80203,80074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050265"},{"annotations":[72321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003968"},{"annotations":[67027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004781"},{"annotations":[70982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003720"},{"annotations":[73685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"},{"annotations":[73025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008108"},{"annotations":[76957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003977"},{"annotations":[80408,72937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a nucleotidyl group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.7.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":80,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00153":null,"SJAG_00399":null,"SJAG_00426":null,"SJAG_00458":null,"SJAG_00611":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_00797":null,"SJAG_00814":null,"SJAG_00890":null,"SJAG_00946":null,"SJAG_01089":null,"SJAG_01164":null,"SJAG_01176":null,"SJAG_01302":null,"SJAG_01313":null,"SJAG_01352":null,"SJAG_01443":null,"SJAG_01444":null,"SJAG_01500":null,"SJAG_01562":null,"SJAG_01704":null,"SJAG_01713":null,"SJAG_01724":null,"SJAG_01765":null,"SJAG_01937":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02178":null,"SJAG_02288":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02506":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_02658":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_02818":null,"SJAG_02889":null,"SJAG_02908":null,"SJAG_02954":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03188":null,"SJAG_03257":null,"SJAG_03356":null,"SJAG_03468":null,"SJAG_03475":null,"SJAG_03563":null,"SJAG_03578":null,"SJAG_03761":null,"SJAG_03896":null,"SJAG_03906":null,"SJAG_03921":null,"SJAG_03932":null,"SJAG_04030":null,"SJAG_04089":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04233":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04628":null,"SJAG_04700":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_04894":null,"SJAG_04934":null,"SJAG_04946":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05979":null,"SJAG_16460":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"nucleotidyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:25318672":null},"secondary_identifiers":["Reactome:R-HSA-6782434"],"termid":"GO:0016779","terms_by_termid":{"GO:0000309":null,"GO:0003720":null,"GO:0003887":null,"GO:0003899":null,"GO:0003919":null,"GO:0003968":null,"GO:0003977":null,"GO:0003983":null,"GO:0004105":null,"GO:0004306":null,"GO:0004475":null,"GO:0004484":null,"GO:0004515":null,"GO:0004605":null,"GO:0004781":null,"GO:0008108":null,"GO:0008193":null,"GO:0008654":null,"GO:0016779":null,"GO:0016979":null,"GO:0017125":null,"GO:0034061":null,"GO:0050265":null,"GO:0052927":null,"GO:0052929":null,"GO:0061710":null,"GO:0070566":null,"GO:0141192":null,"GO:1990817":null}}


