# terms

id: MONDO:0859234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 8b, autosomal recessive","secondary_identifiers":["DOID:0081143","MEDGEN:1808468","OMIM:619824","UMLS:C5676958"],"termid":"MONDO:0859234","xrefs":{"Monarch":{"xref_id":"0859234"}}}


id: GO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"is_a","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall organization","synonyms":[{"name":"cell wall organization and biogenesis","type":"narrow"},{"name":"cellulose and pectin-containing cell wall organization and biogenesis","type":"related"},{"name":"plant-type cell wall organisation","type":"exact"},{"name":"plant-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0009664"}


id: PBO:0068000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 302","termid":"PBO:0068000"}


id: GO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of cytidine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"wobble position cytosine ribose methylation","termid":"GO:0002131"}


id: PBO:0069399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 659, pseudogene","termid":"PBO:0069399"}


id: PATO:0002016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnitude","termid":"PATO:0002016"}


id: MONDO:0043101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypothalamic dysfunction refers to a condition in which the hypothalamus is not working properly. The hypothalamus produces hormones that control body temperature, hunger, moods, release of hormones from many glands such as the pituitary gland, sex drive, sleep, and thirst. The signs and symptoms patients have vary depending on the hormones missing. A number of different causes including anorexia, bleeding, genetic disorder, tumors, and more have been linked to hypothalamic dysfunction. Treatment depends on the cause of the hypothalamic dysfunction.","definition_xrefs":["GARD:0002932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic dysfunction","secondary_identifiers":["SCTID:111568001","MEDGEN:155833","UMLS:C0751230"],"synonyms":[{"name":"hypothalamic dysfunction","type":"exact"},{"name":"hypothalamic syndrome","type":"exact"}],"termid":"MONDO:0043101","xrefs":{"Monarch":{"xref_id":"0043101"}}}


id: PBO:0119669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 8","termid":"PBO:0119669"}


id: PBO:0091062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter","termid":"PBO:0091062"}


id: GO:0051631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine uptake","synonyms":[{"name":"regulation of acetylcholine import","type":"exact"}],"termid":"GO:0051631"}


id: PBO:0003959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM loader","termid":"PBO:0003959"}


id: MONDO:0011842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A frontotemporal dementia characterized by variable phenotypic expression typically including social, behavioral, or language deterioration, rather than memory or motor deficits and the presence of TARDBP-positive inclusions that has material basis in mutation in the GRN gene on chromosome 17q21.31.","definition_xrefs":["PMID:16983677","DOID:0060672","PMID:16862116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontotemporal dementia","termid":"MONDO:0017276"},{"relation_name":"is_a","term_name":"primary progressive aphasia","termid":"MONDO:0019806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"GRN-related frontotemporal lobar degeneration with Tdp43 inclusions","secondary_identifiers":["MEDGEN:375285","OMIM:607485","UMLS:C1843792"],"synonyms":[{"name":"FTLD-TDP, GRN-related","type":"related"},{"name":"aphasia, primary progressive","type":"related"},{"name":"dementia, hereditary dysphasic disinhibition","type":"related"},{"name":"frontotemporal dementia with TDP43 inclusions, GRN-related","type":"related"},{"name":"frontotemporal dementia, ubiquitin-positive","type":"related"},{"name":"frontotemporal lobar degeneration with TDP43 inclusions, GRN-related","type":"related"},{"name":"frontotemporal lobar degeneration with ubiquitin-positive inclusions","type":"related"}],"termid":"MONDO:0011842","xrefs":{"Monarch":{"xref_id":"0011842"}}}


id: PBO:0091187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 6","termid":"PBO:0091187"}


id: GO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a telomeric D-loop. A telomeric D-loop is a three-stranded DNA displacement loop that forms at the site where the telomeric 3' single-stranded DNA overhang (formed of the repeat sequence TTAGGG in mammals) is tucked back inside the double-stranded component of telomeric DNA molecule, thus forming a t-loop or telomeric-loop and protecting the chromosome terminus.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:nc","PMID:19734539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-loop DNA binding","termid":"GO:0062037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"telomeric D-loop binding","synonyms":[{"name":"telomeric Displacement-loop binding","type":"exact"}],"termid":"GO:0061821"}


id: PBO:0063561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PELO antisense RNA 1","termid":"PBO:0063561"}


id: GO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 7 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 7 receptor binding","type":"exact"},{"name":"type 7 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031833"}


id: PBO:0108548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin adaptor End4","termid":"PBO:0108548"}


id: GO:0010473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-galactose + myo-inositol 1-phosphate = alpha-L-galactose-1-phosphate + GDP-myoinositol.","definition_xrefs":["PMID:17485667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity","termid":"GO:0010473"}


id: PBO:0069422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 685, pseudogene","termid":"PBO:0069422"}


id: GO:1901950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement a dense core granule within a cell.","definition_xrefs":["GOC:kmv","PMID:23358451","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"dense core granule transport","synonyms":[{"name":"dense core vesicle transport","type":"exact"}],"termid":"GO:1901950"}


id: MONDO:0021140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of a disease in which the disease is present at birth, regardless of cause.","definition_xrefs":["Wikipedia:Birth_defect"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital or acquired","termid":"MONDO:0021139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital","secondary_identifiers":["icd11.foundation:1048408993"],"synonyms":[{"name":"inborn","type":"exact"}],"termid":"MONDO:0021140","xrefs":{"Monarch":{"xref_id":"0021140"}}}


id: PBO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_input","termid":"PBO:0006175"}


id: PR:O14195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C56E4.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.07","synonyms":[{"name":"Spom972h-SPAC56E4.07","type":"exact"}],"termid":"PR:O14195"}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: GO:0097577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining iron ions such that they are separated from other components of a biological system.","definition_xrefs":["PMID:3099306","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of iron ion (obsolete GO:0097577)","synonyms":[{"name":"iron ion retention","type":"exact"},{"name":"iron ion sequestering","type":"exact"},{"name":"iron ion sequestration","type":"exact"},{"name":"iron ion storage","type":"exact"},{"name":"retention of iron ion","type":"exact"},{"name":"sequestration of iron ion","type":"exact"},{"name":"storage of iron ion","type":"exact"}],"termid":"GO:0097577"}


id: PBO:0069882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1170, pseudogene","termid":"PBO:0069882"}


id: PBO:0012843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-methionine (S)-S-oxide reductase MsrA","termid":"PBO:0012843"}


id: PBO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis, specifically","termid":"PBO:0004909"}


id: PBO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adherin, cohesin loading factor Mis4","termid":"PBO:0000326"}


id: GO:0021528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of commissural neurons. Commissural neurons in both vertebrates and invertebrates transfer information from one side of their bodies to the other through the midline. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commissural neuron differentiation in spinal cord","termid":"GO:0021528"}


id: GO:0002619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"}


id: MONDO:1011074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Dusky leaf-monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Dusky leaf-monkey","secondary_identifiers":["OMIA:001033-54181"],"termid":"MONDO:1011074","xrefs":{"Monarch":{"xref_id":"1011074"}}}


id: MONDO:0035694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to RELA haploinsufficiency","secondary_identifiers":["Orphanet:596759","GARD:22392","MEDGEN:1843216","UMLS:C5680288"],"synonyms":[{"name":"CID due to RELA haploinsufficiency","type":"exact"}],"termid":"MONDO:0035694","xrefs":{"Monarch":{"xref_id":"0035694"}}}


id: FYPO:0006109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from subtelomeric regions are present at greater levels than normal.","definition_xrefs":["PMID:28404620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased subtelomeric transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of siRNAs homologous to subtelomeres","type":"related"},{"name":"increased accumulation of subtelomeric transcript-derived siRNA","type":"exact"},{"name":"increased level of subtelomeric transcript-derived siRNA","type":"exact"},{"name":"increased subtelomere transcript-derived siRNA level","type":"exact"},{"name":"increased subtelomeric transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased subtelomeric transcript-derived siRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006109"}


id: PBO:0015667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor C, GTPase activating protein Tbc1 (predicted)","termid":"PBO:0015667"}


id: GO:1905057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any voltage-gated calcium channel activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["PMID:20734177","GOC:TermGenie","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels","termid":"GO:0099511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium levels","synonyms":[{"name":"depolarization-activated voltage gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"dihydropyridine-sensitive calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"voltage gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"voltage-dependent calcium channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"voltage-gated calcium channel activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"voltage-gated calcium ion channel activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"voltage-sensitive calcium channel involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"}],"termid":"GO:1905057"}


id: PR:000050493
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:30853434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/UnPhos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"PomBase_original_PRO_term_name: division mal foutue 1 protein unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291","type":"narrow"},{"name":"mid1/UnPhos","type":"exact"},{"name":"mid1/UnPhos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050493"}


id: PBO:0076582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 7","termid":"PBO:0076582"}


id: PBO:0014311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis Dph7 (predicted)","termid":"PBO:0014311"}


id: FYPO:0002582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total tRNA or a specific tRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mature tRNA level","termid":"FYPO:0002580"},{"relation_name":"is_a","term_name":"normal mitochondrial RNA level","termid":"FYPO:0004960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mature mitochondrial tRNA level","synonyms":[{"name":"normal mature mitochondrial tRNA accumulation","type":"related"},{"name":"normal mature mitochondrial tRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature mitochondrial tRNA level during vegetative growth","type":"exact"},{"name":"normal mature mitochondrial tRNA transcript level","type":"exact"},{"name":"normal mature mitochondrial transfer RNA level","type":"exact"},{"name":"normal mitochondrial tRNA level","type":"broad"}],"termid":"FYPO:0002582"}


id: PBO:0058682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6810","termid":"PBO:0058682"}


id: PR:O74928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional purine biosynthesis protein PURH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04519","PRO:DNx","PANTHER:PTHR11692:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthesis protein ade10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.03c","secondary_identifiers":["UniProtKB:O74928"],"synonyms":[{"name":"Spom972h-ATIC","type":"exact"}],"termid":"PR:O74928"}


id: PBO:0028797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0028797"}


id: GO:0061406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of glucose.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation (obsolete GO:0061406)","termid":"GO:0061406"}


id: PBO:0081227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 6","termid":"PBO:0081227"}


id: MONDO:0013939
data:
  {"annotated_genes":["SJAG_05950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87585],"is_not":false,"summary":null,"term":"MONDO:0013939"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX26 defect","termid":"MONDO:0100271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005244","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 7B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C155761","UMLS:C3553951","DOID:0081436","MEDGEN:766865","OMIM:614873","GARD:15867"],"synonyms":[{"name":"PBD7B","type":"related"},{"name":"peroxisome biogenesis disorder 7B","type":"exact"},{"name":"peroxisome biogenesis disorder type 7B","type":"exact"}],"termid":"MONDO:0013939","terms_by_termid":{"MONDO:0013939":null},"xrefs":{"Monarch":{"xref_id":"0013939"}}}


id: GO:0106360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-methylhexadecanoyl-CoA = 2-methylpentadecanal + formyl-CoA.","definition_xrefs":["RHEA:25379"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methylhexadecanoyl-CoA lyase activity (obsolete GO:0106360)","termid":"GO:0106360"}


id: MONDO:0019813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital tricuspid stenosis","secondary_identifiers":["icd11.foundation:1996822362","Orphanet:95459","UMLS:C0265836","MEDGEN:539527","NANDO:1200962","SCTID:36233006","ICD10CM:Q22.4","MedDRA:10010656","GARD:19262"],"termid":"MONDO:0019813","xrefs":{"Monarch":{"xref_id":"0019813"}}}


id: FYECO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which peptone was added to the medium or assay buffer in excess. Peptone is a mixture of nutrients generated by proteolytic digestion of animal protein with pepsin and serves as a nitrogen and amino acid source in some culture media. Peptone is not normally added to S. pombe growth media.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ peptone","termid":"FYECO:0000200"}


id: MONDO:1011821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma, non-human animal","secondary_identifiers":["OMIA:001724"],"termid":"MONDO:1011821","xrefs":{"Monarch":{"xref_id":"1011821"}}}


id: GO:0050278
data:
  {"annotated_genes":["SJAG_03759"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74525],"is_not":false,"summary":null,"term":"GO:0050278"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sedoheptulose 1,7-bisphosphate + H2O = sedoheptulose 7-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.37","MetaCyc:SEDOHEPTULOSE-BISPHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"sedoheptulose-bisphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17461"],"synonyms":[{"name":"SBPase activity","type":"related"},{"name":"sedoheptulose 1,7-bisphosphatase activity","type":"related"},{"name":"sedoheptulose 1,7-diphosphatase activity","type":"related"},{"name":"sedoheptulose 1,7-diphosphate phosphatase activity","type":"related"},{"name":"sedoheptulose bisphosphatase activity","type":"related"},{"name":"sedoheptulose diphosphatase activity","type":"related"},{"name":"sedoheptulose-1,7-bisphosphatase activity","type":"related"},{"name":"sedoheptulose-1,7-bisphosphate 1-phosphohydrolase activity","type":"related"}],"termid":"GO:0050278","terms_by_termid":{"GO:0050278":null}}


id: MONDO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor derived from schwann cells of the peripheral sympathetic nervous system, including the sympathetic plexus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system neoplasm","termid":"MONDO:0002366"},{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sympathetic neurilemmoma","secondary_identifiers":["MEDGEN:236964","DOID:3201","UMLS:C1336543","NCIT:C5421"],"synonyms":[{"name":"sympathetic schwannoma","type":"exact"}],"termid":"MONDO:0002554","xrefs":{"Monarch":{"xref_id":"0002554"}}}


id: FYPO:0002101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an 3'-5' DNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000654","FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished 3'-5' DNA helicase activity","synonyms":[{"name":"3'-5' DNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0002101"}


id: MONDO:0022556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculo-cerebral dysplasia (obsolete MONDO:0022556)","termid":"MONDO:0022556","xrefs":{"Monarch":{"xref_id":"0022556"}}}


id: FYPO:0000599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of vacuolar transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of vacuolar transport","synonyms":[{"name":"decreased rate of vacuolar protein transport","type":"narrow"},{"name":"decreased rate of vacuolar transport during mitotic cell cycle","type":"related"},{"name":"decreased rate of vacuolar transport during vegetative growth","type":"exact"},{"name":"reduced rate of vacuolar transport","type":"exact"},{"name":"vacuolar transport: decreased rate","type":"related"}],"termid":"FYPO:0000599"}


id: GO:0018777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alkyl halide + H2O = alcohol + HCl. Substrates are 1,3(R),4,6(R)-tetrachloro-1,4-cyclohexadiene (forms 2,4,5-trichloro-2,5-cyclohexadiene-1-ol) and 2,4,5-trichloro-2,5-cyclohexadiene-1-ol (forms 2,5-dichloro-2,5-cyclohexadiene-1,4-diol).","definition_xrefs":["PMID:10464214"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3,4,6-tetrachloro-1,4-cyclohexadiene halidohydrolase activity (obsolete GO:0018777)","termid":"GO:0018777"}


id: GO:0050333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + thiamine triphosphate = thiamine diphosphate + H+ + phosphate.","definition_xrefs":["RHEA:11744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"thiamine triphosphate phosphatase activity","secondary_identifiers":["Reactome:R-HSA-965067","MetaCyc:THIAMIN-TRIPHOSPHATASE-RXN","KEGG_REACTION:R00618","EC:3.6.1.28","GO:0048253"],"synonyms":[{"name":"ThTPase activity","type":"related"},{"name":"thiamin-triphosphatase activity","type":"related"},{"name":"thiamine triphosphatase activity","type":"related"},{"name":"thiamine-triphosphatase activity","type":"related"},{"name":"thiamine-triphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050333"}


id: GO:0160035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"negatively_regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"negative regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160035"}


id: GO:0004452
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75076],"is_not":false,"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.","definition_xrefs":["RHEA:23284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.3.3.2","Reactome:R-HSA-191382","KEGG_REACTION:R01123","MetaCyc:IPPISOM-RXN"],"synonyms":[{"name":"IPP isomerase activity","type":"related"},{"name":"isopentenyl-diphosphate D-isomerase activity","type":"exact"},{"name":"isopentenyl-diphosphate delta3-delta2-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate delta-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate isomerase activity","type":"related"},{"name":"methylbutenylpyrophosphate isomerase activity","type":"related"}],"termid":"GO:0004452","terms_by_termid":{"GO:0004452":null}}


id: GO:0035897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the hydrolysis of proteins in another organism by cleavage of their peptide bonds.","definition_xrefs":["GOC:bf","GOC:fj","PMID:15922779"],"gene_count":0,"genotype_count":0,"name":"obsolete proteolysis in other organism (obsolete GO:0035897)","termid":"GO:0035897"}


id: GO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by removal of a single nucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide deletion","synonyms":[{"name":"RNA nucleotide excision","type":"exact"}],"termid":"GO:0070706"}


id: GO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.","definition_xrefs":["PMID:19427217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"HAUS complex","synonyms":[{"name":"HAUS augmin complex","type":"exact"}],"termid":"GO:0070652"}


id: MONDO:0000029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corticosterone methyloxidase deficiency (obsolete MONDO:0000029)","termid":"MONDO:0000029","xrefs":{"Monarch":{"xref_id":"0000029"}}}


id: GO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the ureteric bud such that there is a similar arrangement in form and relationship of parts along its anterior/posterior axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in ureteric bud development","termid":"GO:0072099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of ureteric bud anterior/posterior symmetry","synonyms":[{"name":"specification of ureteric bud anterior/posterior asymmetry","type":"exact"}],"termid":"GO:0072100"}


id: PBO:0072330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 16","termid":"PBO:0072330"}


id: PBO:0065899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB42, member RAS oncogene family","termid":"PBO:0065899"}


id: MONDO:0035357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"portosinusoidal vascular disease","secondary_identifiers":["Orphanet:596937","UMLS:C5680289","GARD:22393","MEDGEN:1842183"],"synonyms":[{"name":"PSVD","type":"exact"}],"termid":"MONDO:0035357","xrefs":{"Monarch":{"xref_id":"0035357"}}}


id: PR:Q09191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10535:SF0","OMA:SCHPO00420","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.15","secondary_identifiers":["UniProtKB:Q09191"],"synonyms":[{"name":"RNA polymerases I, II, and III subunit ABC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC24B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2E","type":"exact"}],"termid":"PR:Q09191"}


id: PBO:0040623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 2","termid":"PBO:0040623"}


id: GO:0075172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its MAP kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of MAP kinase-mediated signal transduction in response to host (obsolete GO:0075172)","synonyms":[{"name":"positive regulation of symbiont MAP kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075172"}


id: PBO:0047160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member B","termid":"PBO:0047160"}


id: GO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem I protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem I stabilization","termid":"GO:0042550"}


id: PBO:0041381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 2","termid":"PBO:0041381"}


id: MONDO:0001609
data:
  {"annotated_genes":["SJAG_01759","SJAG_03089","SJAG_01732","SJAG_03684","SJAG_03889","SJAG_02208","SJAG_01798","SJAG_02453","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[86342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[86456,86457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[87050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[87144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[86068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[86989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A decrease in the number of mature granulocytes (neutrophils, eosinophils, and basophils) in the peripheral blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukopenia","termid":"MONDO:0003785"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agranulocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C2863","icd11.foundation:1913706366","MEDGEN:7932","UMLS:C0001824","DOID:12987","ICD9:288.8","SCTID:417672002","ICD10CM:D70","ICD10WHO:D70","MESH:D000380"],"synonyms":[{"name":"Granulocytopenic disorder","type":"exact"},{"name":"Granulopenia","type":"exact"},{"name":"granulocytopenia","type":"exact"}],"termid":"MONDO:0001609","terms_by_termid":{"MONDO:0010294":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0001609"}}}


id: GO:0102837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102837)","termid":"GO:0102837"}


id: BFO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a core relation that holds between a whole and its part","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part","termid":"BFO:0000051"}


id: PBO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med11 (predicted)","termid":"PBO:0001679"}


id: PBO:0076900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 54","termid":"PBO:0076900"}


id: PBO:0071959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6","termid":"PBO:0071959"}


id: PBO:0025452
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III deficiency","termid":"PBO:0025452"}


id: GO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-protein beta subunit.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-protein beta-subunit binding","synonyms":[{"name":"G-beta protein subunit binding","type":"exact"}],"termid":"GO:0031681"}


id: MONDO:0010604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B is a form of hemophilia characterized by spontaneous or prolonged hemorrhages due to factor IX deficiency.","definition_xrefs":["Orphanet:98879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"hemophilia","termid":"MONDO:0018660"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia B","secondary_identifiers":["SCTID:41788008","icd11.foundation:1901375668","ICD9:286.1","OMIM:306900","NCIT:C26721","GARD:8732","MEDGEN:945","UMLS:C0008533","DOID:12259","MESH:D002836","MedDRA:10016077","NANDO:2200677"],"synonyms":[{"name":"Christmas disease","type":"exact"},{"name":"F9 deficiency","type":"related"},{"name":"HEMB","type":"related"},{"name":"congenital factor IX deficiency","type":"exact"},{"name":"congenital factor IX disorder","type":"exact"},{"name":"deficiency, functional factor IX","type":"exact"},{"name":"factor 9 deficiency","type":"related"},{"name":"factor IX deficiency","type":"exact"},{"name":"haemophilia B Leyden","type":"related"},{"name":"haemophilia B(M)","type":"related"},{"name":"haemophilia b, X-linked recessive","type":"exact"},{"name":"haemophilia type B","type":"exact"},{"name":"hem B","type":"related"},{"name":"hemophilia B","type":"exact"},{"name":"hemophilia B Leyden","type":"related"},{"name":"hemophilia B(M)","type":"related"},{"name":"hemophilia b, X-linked recessive","type":"exact"},{"name":"hemophilia type B","type":"exact"},{"name":"hereditary Factor IX deficiency","type":"exact"},{"name":"hereditary Factor IX deficiency disease","type":"exact"},{"name":"plasma thromboplastin component deficiency","type":"related"}],"termid":"MONDO:0010604","xrefs":{"Monarch":{"xref_id":"0010604"}}}


id: GO:0060349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone morphogenesis","termid":"GO:0060349"}


id: PBO:0038679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 5","termid":"PBO:0038679"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: GO:1903075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyridoxine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000075","PMID:15701794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"pyridoxine transmembrane transport","termid":"GO:1903092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"pyridoxine import across plasma membrane","synonyms":[{"name":"pyridoxine import into cell","type":"exact"}],"termid":"GO:1903075"}


id: MONDO:1012371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysplasia epiphysealis hememelica, non-human animal","termid":"MONDO:1011769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplasia epiphysealis hememelica, dog","secondary_identifiers":["OMIA:001361-9615"],"termid":"MONDO:1012371","xrefs":{"Monarch":{"xref_id":"1012371"}}}


id: GO:1901278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ribose 5-phosphate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate metabolic process","termid":"GO:0019693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-ribose 5-phosphate metabolic process","synonyms":[{"name":"D-ribose 5-phosphate metabolism","type":"exact"}],"termid":"GO:1901278"}


id: GO:0010365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an ethylene biosynthetic process.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethylene biosynthetic process","termid":"GO:0010364"},{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"positively_regulates","term_name":"ethylene biosynthetic process","termid":"GO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ethylene biosynthetic process","termid":"GO:0010365"}


id: PBO:0003742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0003742"}


id: PBO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_arginine_level","termid":"PBO:0030584"}


id: PBO:0000568
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.3.2","termid":"PBO:0000568"}


id: GO:0102827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: raffinose + D-galactosylononitol = stachyose + 1D-4-O-methyl-myo-inositol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosylononitol-raffinose galactosyltransferase activity (obsolete GO:0102827)","termid":"GO:0102827"}


id: SO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA_gene","synonyms":[{"name":"cytosolic small subunit rRNA gene","type":"exact"}],"termid":"SO:0002362"}


id: PBO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-6 (pseudogene)","termid":"PBO:0051134"}


id: PBO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Lysine","termid":"PBO:0001131"}


id: GO:1990608
data:
  {"annotated_genes":["SJAG_03200","SJAG_02332","SJAG_01460","SJAG_04558","SJAG_05196","SJAG_01422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90486,113232,100967,103823,103184,111822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which a mitotic spindle pole body is transported to, or maintained in, a specific cellular location.","definition_xrefs":["PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body localization","termid":"GO:0070631"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070632","GO:0071789"],"synonyms":[{"name":"establishment and maintenance of spindle pole body localization","type":"exact"},{"name":"establishment of spindle pole body localisation","type":"narrow"},{"name":"establishment of spindle pole body localization","type":"narrow"},{"name":"mitotic spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body docking","type":"narrow"},{"name":"spindle pole body localisation in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body positioning","type":"narrow"}],"termid":"GO:1990608","terms_by_termid":{"GO:0140480":null}}


id: GO:0097021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:18379575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration into lymphoid organs","synonyms":[{"name":"lymphocyte homing","type":"narrow"}],"termid":"GO:0097021"}


id: MONDO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short rib-polydactyly syndrome type 5 (obsolete MONDO:0044680)","termid":"MONDO:0044680","xrefs":{"Monarch":{"xref_id":"0044680"}}}


id: PBO:0053773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1018","termid":"PBO:0053773"}


id: GO:1902229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["PMID:15314165","GOC:TermGenie","GOC:BHF","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902229"}


id: MONDO:0021366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the middle ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of middle ear","secondary_identifiers":["SCTID:127006003","MEDGEN:87509","UMLS:C0345617","NCIT:C4412","ICD9:239.89"],"synonyms":[{"name":"middle Ear neoplasm","type":"exact"},{"name":"middle Ear tumor","type":"exact"},{"name":"middle Ear tumour","type":"exact"},{"name":"middle ear neoplasm","type":"exact"},{"name":"middle ear neoplasm (disease)","type":"exact"},{"name":"middle ear tumor","type":"exact"},{"name":"middle ear tumour","type":"exact"},{"name":"neoplasm of middle ear","type":"exact"},{"name":"neoplasm of the middle Ear","type":"exact"},{"name":"tumor of middle Ear","type":"exact"},{"name":"tumor of middle ear","type":"exact"},{"name":"tumor of the middle Ear","type":"exact"},{"name":"tumour of middle Ear","type":"exact"},{"name":"tumour of middle ear","type":"exact"},{"name":"tumour of the middle Ear","type":"exact"}],"termid":"MONDO:0021366","xrefs":{"Monarch":{"xref_id":"0021366"}}}


id: GO:1902939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of intracellular calcium activated chloride channel activity.","definition_xrefs":["GO_REF:0000059","GOC:als","GOC:TermGenie","PMID:22946059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of intracellular calcium activated chloride channel activity (obsolete GO:1902939)","synonyms":[{"name":"down regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"down-regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"downregulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"inhibition of intracellular calcium activated chloride channel activity","type":"narrow"}],"termid":"GO:1902939"}


id: GO:1990325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXVII) chains. These trimers form thin, non-striated fibrils. Type XXVII collagen triple helices play a role during the calcification of cartilage and the transition of cartilage to bone.","definition_xrefs":["GOC:bhm","PMID:17876790","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXVII trimer","termid":"GO:1990325"}


id: PBO:0082634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Dsc E3 ligase complex in vacuolar membranes; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; YIR014W is a non-essential gene","termid":"PBO:0082634"}


id: MONDO:0017311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with thoracic aortic aneurysm and aortic dissection (obsolete MONDO:0017311)","secondary_identifiers":["Orphanet:285014"],"termid":"MONDO:0017311","xrefs":{"Monarch":{"xref_id":"0017311"}}}


id: GO:0006838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete allantoin/allantoate transport (obsolete GO:0006838)","synonyms":[{"name":"allantoin/allantoate transport","type":"exact"}],"termid":"GO:0006838"}


id: PBO:0043127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 1","termid":"PBO:0043127"}


id: PATO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has extra parts of type","secondary_identifiers":["PATO:0001560"],"synonyms":[{"name":"has extra parts of","type":"exact"},{"name":"has increased number of","type":"exact"},{"name":"having extra physical parts","type":"exact"},{"name":"having supernumerary physical parts","type":"exact"},{"name":"increased number of","type":"exact"}],"termid":"PATO:0002002"}


id: GO:1990091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sodium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sodium-dependent self proteolysis","termid":"GO:1990091"}


id: GO:0031136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of conjugation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of conjugation (obsolete GO:0031136)","synonyms":[{"name":"activation of conjugation","type":"narrow"},{"name":"stimulation of conjugation","type":"narrow"},{"name":"up regulation of conjugation","type":"exact"},{"name":"up-regulation of conjugation","type":"exact"},{"name":"upregulation of conjugation","type":"exact"}],"termid":"GO:0031136"}


id: GO:0019307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mannose biosynthetic process","synonyms":[{"name":"mannose anabolism","type":"exact"},{"name":"mannose biosynthesis","type":"exact"},{"name":"mannose formation","type":"exact"},{"name":"mannose synthesis","type":"exact"}],"termid":"GO:0019307"}


id: MONDO:0014502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mendelian susceptibility to mycobacterial diseases (MSMD) due to complete ISG15 deficiency is a genetic variant of MSMD characterized by Bacille Calmette-GuC)rin (BCG) infections.","definition_xrefs":["Orphanet:319563"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 1 interferonopathy (obsolete MONDO:0018782)","termid":"MONDO:0018782"},{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to complete ISG15 deficiency","secondary_identifiers":["MEDGEN:863730","DOID:0111934","UMLS:C4015293","OMIM:616126"],"synonyms":[{"name":"IMD38","type":"related"},{"name":"ISG15 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency","type":"exact"},{"name":"ISG15 deficiency, autosomal recessive","type":"related"},{"name":"MSMD due to complete ISG15 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency caused by mutation in ISG15","type":"exact"},{"name":"immunodeficiency 38","type":"exact"},{"name":"immunodeficiency 38 with basal ganglia calcification","type":"related"},{"name":"immunodeficiency 38, Mycobacteriosis, autosomal recessive","type":"related"}],"termid":"MONDO:0014502","xrefs":{"Monarch":{"xref_id":"0014502"}}}


id: PBO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Hsr1","termid":"PBO:0001257"}


id: GO:1900691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliotoxin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of gliotoxin biosynthetic process","termid":"GO:1900689"},{"relation_name":"positively_regulates","term_name":"gliotoxin biosynthetic process","termid":"GO:2001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"positive regulation of gliotoxin biosynthetic process","synonyms":[{"name":"activation of gliotoxin anabolism","type":"exact"},{"name":"activation of gliotoxin biosynthesis","type":"exact"},{"name":"activation of gliotoxin biosynthetic process","type":"narrow"},{"name":"activation of gliotoxin formation","type":"exact"},{"name":"activation of gliotoxin synthesis","type":"exact"},{"name":"positive regulation of gliotoxin anabolism","type":"exact"},{"name":"positive regulation of gliotoxin biosynthesis","type":"exact"},{"name":"positive regulation of gliotoxin formation","type":"exact"},{"name":"positive regulation of gliotoxin synthesis","type":"exact"},{"name":"up regulation of gliotoxin anabolism","type":"exact"},{"name":"up regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up regulation of gliotoxin formation","type":"exact"},{"name":"up regulation of gliotoxin synthesis","type":"exact"},{"name":"up-regulation of gliotoxin anabolism","type":"exact"},{"name":"up-regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up-regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up-regulation of gliotoxin formation","type":"exact"},{"name":"up-regulation of gliotoxin synthesis","type":"exact"},{"name":"upregulation of gliotoxin anabolism","type":"exact"},{"name":"upregulation of gliotoxin biosynthesis","type":"exact"},{"name":"upregulation of gliotoxin biosynthetic process","type":"exact"},{"name":"upregulation of gliotoxin formation","type":"exact"},{"name":"upregulation of gliotoxin synthesis","type":"exact"}],"termid":"GO:1900691"}


id: RO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","termid":"RO:0002349"}


id: PBO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3P pseudogene 6","termid":"PBO:0050923"}


id: GO:0032801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor catabolic process","synonyms":[{"name":"receptor breakdown","type":"exact"},{"name":"receptor catabolism","type":"exact"},{"name":"receptor degradation","type":"exact"}],"termid":"GO:0032801"}


id: PBO:0041917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 1","termid":"PBO:0041917"}


id: PBO:0076442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 1","termid":"PBO:0076442"}


id: FYPO:0002316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular squalene level","synonyms":[{"name":"normal cellular squalene accumulation","type":"related"},{"name":"normal cellular squalene level during mitotic cell cycle","type":"related"},{"name":"normal cellular squalene level during vegetative growth","type":"exact"}],"termid":"FYPO:0002316"}


id: PBO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor Sak1","termid":"PBO:0001906"}


id: PBO:0088241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S41","termid":"PBO:0088241"}


id: PATO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed transversely.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transverse orientation","synonyms":[{"name":"transversely oriented","type":"exact"}],"termid":"PATO:0002502"}


id: PBO:0086745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; potential Cdc28p substrate","termid":"PBO:0086745"}


id: MONDO:0013934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic combined T and B cell immunodeficiency characterized by T- and B-cell lymphopenia, hypergammaglobulinemia and intermittent neutropenia. It presents with recurrent opportunistic viral, bacterial and fungal infections involving skin (cutaneous papillomatosis, molluscum contagiosum, skin abscesses, mucocutaneous candidiasis), upper and lower respiratory tract or septicemia. Other clinical features include autoimmune manifestations (autoimmune hemolytic anemia) and congenital heart defects (atrial septal defects, patent foramen ovale, mitral, triscupid and pulmonary valve insufficiency).","definition_xrefs":["Orphanet:314689"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to STK4 deficiency","secondary_identifiers":["UMLS:C3553943","MEDGEN:766857","GARD:17430","OMIM:614868"],"synonyms":[{"name":"CID due to STK4 deficiency","type":"exact"},{"name":"MST1 deficiency","type":"exact"},{"name":"STK4 deficiency","type":"exact"},{"name":"T-cell immunodeficiency, recurrent infections, and autoimmunity with or without CARDIAC malformations","type":"related"},{"name":"T-cell immunodeficiency, recurrent infections, autoimmunity, and cardiac malformations","type":"exact"},{"name":"TIIAC","type":"exact"}],"termid":"MONDO:0013934","xrefs":{"Monarch":{"xref_id":"0013934"}}}


id: MONDO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An encephalitis caused by infection with Treponema.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treponema infectious disease","termid":"MONDO:0007000"},{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syphilitic encephalitis","secondary_identifiers":["UMLS:C0153168","ICD9:094.81","MEDGEN:509177","SCTID:26135000","DOID:10081"],"synonyms":[{"name":"Treponema caused encephalitis","type":"exact"},{"name":"Treponema encephalitis","type":"exact"}],"termid":"MONDO:0000937","xrefs":{"Monarch":{"xref_id":"0000937"}}}


id: GO:0120201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a cone photoreceptor outer segment, and containing densely packed molecules of opsin photoreceptor proteins that traverse the lipid bilayer. Cone disc membranes arise as evaginations of the ciliary membrane during the development of the cone outer segment and remain contiguous with the ciliary membrane.","definition_xrefs":["PMID:26574505","GOC:krc","PMID:19501669","PMID:6771304","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"is_a","term_name":"photoreceptor disc membrane","termid":"GO:0097381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cone photoreceptor disc membrane","termid":"GO:0120201"}


id: GO:2000147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell motility.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"positively_regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell motility","synonyms":[{"name":"positive regulation of cell locomotion","type":"exact"},{"name":"positive regulation of cell movement","type":"related"},{"name":"positive regulation of movement of a cell","type":"exact"}],"termid":"GO:2000147"}


id: GO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins following the induction of and contributing to an immune response.","definition_xrefs":["PMID:11205333","GOC:add","ISBN:0781735149","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic hypermutation of immunoglobulin genes","termid":"GO:0016446"},{"relation_name":"part_of","term_name":"B cell affinity maturation","termid":"GO:0002344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"somatic hypermutation of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic hypermutation of antibody genes during immune response","type":"related"},{"name":"somatic hypermutation of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002205"}


id: FYPO:0007912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial localization is normal.","definition_xrefs":["PMID:10641037","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal organelle localization","termid":"FYPO:0007913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial distribution","synonyms":[{"name":"normal mitochondrial localization","type":"exact"}],"termid":"FYPO:0007912"}


id: MONDO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete LEOPARD syndrome (obsolete MONDO:0001937)","termid":"MONDO:0001937","xrefs":{"Monarch":{"xref_id":"0001937"}}}


id: PBO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF654 family protein","termid":"PBO:0002144"}


id: MONDO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schwartz-Cohen-addad-Lambert syndrome","secondary_identifiers":["MEDGEN:443962","UMLS:C2931036","MESH:C535835"],"synonyms":[{"name":"Schwartz Cohen-Addad Lambert syndrome","type":"related"},{"name":"congenital melanocytosis with myelomeningocele and hydrocephalus","type":"related"}],"termid":"MONDO:0042911","xrefs":{"Monarch":{"xref_id":"0042911"}}}


id: PBO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calchone related protein family","termid":"PBO:0001417"}


id: PBO:0062775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 3","termid":"PBO:0062775"}


id: PBO:0056608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 1","termid":"PBO:0056608"}


id: MONDO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal kinesigenic dyskinesia (PKD) is a form of paroxysmal dyskinesia, characterized by recurrent brief involuntary hyperkinesias, such as choreoathetosis, ballism, athetosis or dystonia, triggered by sudden movements.","definition_xrefs":["Orphanet:98809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"episodic kinesigenic dyskinesia","secondary_identifiers":["MEDGEN:358268","UMLS:C1868682","GARD:8721","OMIMPS:128200"],"synonyms":[{"name":"EKD","type":"broad"},{"name":"familial PKD","type":"exact"},{"name":"familial paroxysmal kinesigenic dyskinesia","type":"exact"},{"name":"paroxysmal kinesigenic choreathetosis","type":"exact"}],"termid":"MONDO:0044202","xrefs":{"Monarch":{"xref_id":"0044202"}}}


id: MONDO:0024532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any otofaciocervical syndrome in which the cause of the disease is a mutation in the EYA1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otofaciocervical syndrome","termid":"MONDO:0008163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otofaciocervical syndrome 1","secondary_identifiers":["OMIM:166780","MEDGEN:811516","GARD:16502","UMLS:C3714941"],"synonyms":[{"name":"EYA1 otofaciocervical syndrome","type":"exact"},{"name":"OFC","type":"broad"},{"name":"OFC1","type":"related"},{"name":"OTFCS","type":"broad"},{"name":"otofaciocervical syndrome","type":"broad"},{"name":"otofaciocervical syndrome 1","type":"exact"},{"name":"otofaciocervical syndrome caused by mutation in EYA1","type":"exact"}],"termid":"MONDO:0024532","xrefs":{"Monarch":{"xref_id":"0024532"}}}


id: GO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid.","definition_xrefs":["EC:3.5.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"aminoacylase activity","secondary_identifiers":["MetaCyc:AMINOACYLASE-RXN","Reactome:R-HSA-9753944","Reactome:R-HSA-5579081","RHEA:15565","Reactome:R-HSA-9638046","Reactome:R-HSA-5433074"],"synonyms":[{"name":"L-amino-acid acylase activity","type":"related"},{"name":"L-aminoacylase activity","type":"related"},{"name":"N-acyl-L-amino-acid amidohydrolase activity","type":"related"},{"name":"acylase I activity","type":"narrow"},{"name":"alpha-N-acylaminoacid hydrolase activity","type":"related"},{"name":"amido acid deacylase activity","type":"related"},{"name":"aminoacylase I activity","type":"narrow"},{"name":"benzamidase activity","type":"related"},{"name":"dehydropeptidase II activity","type":"narrow"},{"name":"hippurase activity","type":"related"},{"name":"histozyme activity","type":"related"},{"name":"long acyl amidoacylase activity","type":"related"},{"name":"short acyl amidoacylase activity","type":"related"}],"termid":"GO:0004046"}


id: PBO:0029513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_stubby_vegetative_cell_population_(obsolete_FYPO:0002201)","termid":"PBO:0029513"}


id: PBO:0063192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 5","termid":"PBO:0063192"}


id: PBO:0070084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 41, pseudogene","termid":"PBO:0070084"}


id: PBO:0058623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6755","termid":"PBO:0058623"}


id: PBO:0052164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 12","termid":"PBO:0052164"}


id: PR:Q9UU80
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05059","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.07c","secondary_identifiers":["UniProtKB:Q9UU80"],"synonyms":[{"name":"Spom972h-CCDC12","type":"exact"},{"name":"complexed with cdc5 protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU80"}


id: PBO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein, implicated in meiotic chromosome segregation","termid":"PBO:0001027"}


id: PBO:0109015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 16, pseudogene","termid":"PBO:0109015"}


id: PBO:0046496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERGIC and golgi 3","termid":"PBO:0046496"}


id: PATO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in a bearer by virtue of the bearer's initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fertility","termid":"PATO:0000274"}


id: MONDO:0017686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of aminoacylase activity.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn aminoacylase deficiency","secondary_identifiers":["GARD:21304","Orphanet:308448","UMLS:C5681074","MEDGEN:1842952"],"synonyms":[{"name":"aminoacylase deficiency","type":"related"},{"name":"inborn aminoacylase activity disorder","type":"exact"},{"name":"inborn error of aminoacylase activity","type":"exact"},{"name":"rare inborn error of aminoacylase activity","type":"exact"}],"termid":"MONDO:0017686","xrefs":{"Monarch":{"xref_id":"0017686"}}}


id: MONDO:0859086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 110","secondary_identifiers":["UMLS:C5774180","MEDGEN:1823954","OMIM:301095"],"termid":"MONDO:0859086","xrefs":{"Monarch":{"xref_id":"0859086"}}}


id: GO:0014891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in striated muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"},{"relation_name":"is_a","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle atrophy","termid":"GO:0014891"}


id: MONDO:1012812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukodystrophy that occurs in dogs due to a mutation in the TSEN54 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, dog","termid":"MONDO:1011005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukodystrophy, TSEN54-related, dog","secondary_identifiers":["OMIA:002215-9615"],"termid":"MONDO:1012812","xrefs":{"Monarch":{"xref_id":"1012812"}}}


id: MONDO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of all four limbs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadriplegia","secondary_identifiers":["DOID:12835","MEDGEN:19617","SCTID:11538006","ICD9:344.09","MESH:D011782","UMLS:C0034372","EFO:0009684","NCIT:C50721","ICD9:344.00"],"synonyms":[{"name":"bilateral diplegia","type":"exact"},{"name":"tetraplegia","type":"exact"}],"termid":"MONDO:0001590","xrefs":{"Monarch":{"xref_id":"0001590"}}}


id: GO:1901588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any microtubule in a dendrite, a neuron projection.","definition_xrefs":["GOC:TermGenie","NIF_Subcellular:sao110773650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"dendritic microtubule","synonyms":[{"name":"microtubule of dendrite","type":"exact"},{"name":"microtubulus of dendrite","type":"exact"}],"termid":"GO:1901588"}


id: PBO:0084229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huge dynein-related AAA-type ATPase (midasin); forms extended pre-60S particle with the Rix1 complex; involved with interaction partners Rsa4p and Ytm1p, in the ATP-dependent remodeling of the pre-60S particle at successive maturation steps during ribosomal biogenesis; involved in the removal of biogenesis factors including GTPase Nog2p prior to nuclear export; contains a hexameric AAA-motor head domain and a long flexible tail with a MIDAS (metal ion-dependent adhesion site) domain","termid":"PBO:0084229"}


id: PR:Q9UTM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00509","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.02c","secondary_identifiers":["UniProtKB:Q9UTM4"],"synonyms":[{"name":"CCT-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT5","type":"exact"},{"name":"TCP-1-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTM4"}


id: PBO:0056375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 2","termid":"PBO:0056375"}


id: GO:0047626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + H2O = S-methyl-5'-thioadenosine + L-homoserine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosylmethionine hydrolase activity (obsolete GO:0047626)","synonyms":[{"name":"adenosyl methionine hydrolase activity","type":"exact"}],"termid":"GO:0047626"}


id: GO:0039534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the series of the MDA-5 signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of MDA-5 signaling pathway","termid":"GO:0039533"},{"relation_name":"negatively_regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MDA-5 signaling pathway","synonyms":[{"name":"negative regulation of IFIH1 signaling pathway","type":"exact"},{"name":"negative regulation of MDA-5 signalling pathway","type":"exact"},{"name":"negative regulation of MDA5 signaling pathway","type":"exact"},{"name":"negative regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039534"}


id: PBO:0029235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_salt_stress","termid":"PBO:0029235"}


id: MONDO:0013910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the KISS1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 8 with or without anosmia","secondary_identifiers":["MEDGEN:766755","DOID:0090074","OMIM:614837","GARD:15849","ICD10CM:E23.0","UMLS:C3553841"],"synonyms":[{"name":"HH8","type":"related"},{"name":"KISS1R hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 8 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in KISS1R","type":"exact"}],"termid":"MONDO:0013910","xrefs":{"Monarch":{"xref_id":"0013910"}}}


id: FYPO:0004541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin silencing at centromere","termid":"FYPO:0005071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at centromere inner repeat","synonyms":[{"name":"increased chromatin silencing at centromere imr","type":"exact"},{"name":"increased chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"increased heterochromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0004541"}


id: GO:0046187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde catabolic process","synonyms":[{"name":"acetaldehyde breakdown","type":"exact"},{"name":"acetaldehyde catabolism","type":"exact"},{"name":"acetaldehyde degradation","type":"exact"}],"termid":"GO:0046187"}


id: PBO:0085252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; mediates Sey1p-independent homotypic ER fusion; forms Dsl1 tethering complex with Sec39p and Tip20p that forms a stable complex with ER SNAREs Sec20p, Ufe1p and Use1p and is functionally conserved from yeast to mammalian cells; component of the ER target site that interacts with coatomer; interacts with different subunits of COPI vesicle coat; interacts with Cin5p; homolog of fly and human ZW10 gene","termid":"PBO:0085252"}


id: PBO:0048856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 1","termid":"PBO:0048856"}


id: PBO:0084354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase; reduces intracellular ROS, contributes to L-proline analog resistance and tolerance to ethanol and freezing; member of N-acetyltransferase superfamily; not found in S288C, present in strains with Sigma1278b background; located on left arm of Chr X ~ 15 kb from telomere; identical to MPR1 except for one base at position 254, leading to Gly at position 85 in MPR1 and Glu in MPR2; present also in Japanese industrial baker's yeast","termid":"PBO:0084354"}


id: PBO:0091768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide matMc","termid":"PBO:0091768"}


id: GO:0014012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons outside the central nervous system (outside the brain and spinal cord) following an axonal injury.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system axon regeneration","synonyms":[{"name":"axon regeneration in peripheral nervous system","type":"exact"}],"termid":"GO:0014012"}


id: PR:O94562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.03c gene.","definition_xrefs":["UniProtKB:O94562","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C1771.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.03c","synonyms":[{"name":"Spom972h-SPBC1773.03c","type":"exact"}],"termid":"PR:O94562"}


id: GO:0072582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 17-beta-hydroxysteroid + NADP+ = a 17-oxosteroid + NADPH + H+.","definition_xrefs":["PMID:17074428","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"17-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:69284"],"termid":"GO:0072582"}


id: GO:2000731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase I transcription.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase I transcription","termid":"GO:2000730"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase I transcription","termid":"GO:0006363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase I transcription","synonyms":[{"name":"negative regulation of RNA polymerase I transcription termination","type":"exact"},{"name":"negative regulation of transcription termination from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2000731"}


id: PBO:0076773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 15","termid":"PBO:0076773"}


id: PBO:0116198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase, Sah1","termid":"PBO:0116198"}


id: PBO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 122 (pseudogene)","termid":"PBO:0044834"}


id: PBO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidotransferase (predicted)","termid":"PBO:0000355"}


id: GO:0010312
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94128,94129],"is_not":false,"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of zinc ion. These include transport of zinc away from sensitive areas and to compartments or complexes whose purpose is sequestration of zinc ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to zinc ion","termid":"GO:1990359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010312","terms_by_termid":{"GO:0010312":null}}


id: FYPO:0002345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to oxaliplatin. Cells stop growing (and may die) at a concentration of oxaliplatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to oxaliplatin","synonyms":[{"name":"hypersensitive to oxaliplatin","type":"exact"},{"name":"sensitive to oxaliplatin during mitotic cell cycle","type":"related"},{"name":"sensitive to oxaliplatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002345"}


id: GO:0002820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune response","synonyms":[{"name":"down regulation of adaptive immune response","type":"exact"},{"name":"down-regulation of adaptive immune response","type":"exact"},{"name":"downregulation of adaptive immune response","type":"exact"},{"name":"inhibition of adaptive immune response","type":"narrow"}],"termid":"GO:0002820"}


id: PBO:0090830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane TRP-like calcium ion channel Pkd2","termid":"PBO:0090830"}


id: PBO:0116407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar/ prevavuolar endosome sodium/potassium ion/proton antiporter Nhx1","termid":"PBO:0116407"}


id: PBO:0056423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage receptor with collagenous structure","termid":"PBO:0056423"}


id: MONDO:1010743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic dermatitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atopic dermatitis, non-human animal","termid":"MONDO:1010126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atopic dermatitis, dog","secondary_identifiers":["OMIA:000269-9615"],"termid":"MONDO:1010743","xrefs":{"Monarch":{"xref_id":"1010743"}}}


id: MONDO:0010359
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87403],"is_not":false,"summary":null,"term":"MONDO:0010359"}]},"cv_name":"mondo","definition":"Dent disease type 2 is a type of Dent disease in which patients have the manifestations of Dent disease type 1 associated with extra-renal features.","definition_xrefs":["Orphanet:93623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dent disease","termid":"MONDO:0015612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Dent disease type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:336867","GARD:10645","DOID:0081454","SCTID:717790004","OMIM:300555","UMLS:C1845167","icd11.foundation:2053330521","MESH:C564487"],"synonyms":[{"name":"DENT disease 2","type":"related"},{"name":"Dent disease caused by mutation in OCRL","type":"exact"},{"name":"Dent disease type 2","type":"exact"},{"name":"OCRL Dent disease","type":"exact"},{"name":"dent disease 2, X-linked recessive","type":"exact"},{"name":"nephrolithiasis type 2","type":"exact"}],"termid":"MONDO:0010359","terms_by_termid":{"MONDO:0010359":null},"xrefs":{"Monarch":{"xref_id":"0010359"}}}


id: GO:0046496
data:
  {"annotated_genes":["SJAG_02148","SJAG_02369","SJAG_02945","SJAG_03934","SJAG_06621","SJAG_04495","SJAG_03852","SJAG_01310","SJAG_02107","SJAG_03946","SJAG_03660","SJAG_00522","SJAG_00501","SJAG_06622","SJAG_03373","SJAG_02154","SJAG_02618","SJAG_01753","SJAG_03306","SJAG_01824","SJAG_02785","SJAG_02796","SJAG_02297","SJAG_00027","SJAG_02853","SJAG_04192","SJAG_02191","SJAG_02462","SJAG_01500","SJAG_04263","SJAG_02009","SJAG_03298","SJAG_00605","SJAG_03669","SJAG_03903","SJAG_01566","SJAG_01582","SJAG_02135","SJAG_00070","SJAG_04693","SJAG_04048","SJAG_04334","SJAG_02889","SJAG_03828","SJAG_00461","SJAG_00685","SJAG_00839","SJAG_05314","SJAG_03174","SJAG_00714","SJAG_04362","SJAG_00633","SJAG_02696","SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66489,89663,103801],"is_not":false,"summary":null,"term":"GO:0046496"},{"annotations":[78220,105828,109775,109776,106198,105827,109771,109774,116741,95380,98352,109770,109773,105829,106199,94886,103750,109772,98622,104006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[88193,96919,116949,112201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[113475,77818,75118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[80295,99701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[72602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[58543,67060,69480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[72604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[95475,95474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"},{"annotations":[80217,71489,78306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[72605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[74237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006739"},{"annotations":[73430,76393],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[68440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006098"},{"annotations":[73475,74896,74107,108808,104718],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[98543,97247,97337,73441,80753],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[90049],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[70471],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[76392],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic 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nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"nicotinamide nucleotide metabolism","type":"exact"}],"termid":"GO:0046496","terms_by_termid":{"GO:0006098":null,"GO:0006110":null,"GO:0006734":null,"GO:0006735":null,"GO:0006739":null,"GO:0006741":null,"GO:0006742":null,"GO:0009051":null,"GO:0009052":null,"GO:0009435":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0043456":null,"GO:0043490":null,"GO:0045820":null,"GO:0046496":null,"GO:0061613":null,"GO:0061621":null,"GO:1905857":null}}


id: MONDO:0017544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly type 1","termid":"MONDO:0008512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygodactyly type 3","secondary_identifiers":["icd11.foundation:1831534806","MEDGEN:1843229","Orphanet:295191","UMLS:C5679983","GARD:21215"],"synonyms":[{"name":"SD1, Montagu type","type":"exact"},{"name":"SD1c","type":"exact"},{"name":"Zygodactyly, Montagu type","type":"exact"},{"name":"syndactyly type 1, Montagu type","type":"exact"},{"name":"syndactyly type 1c","type":"exact"}],"termid":"MONDO:0017544","xrefs":{"Monarch":{"xref_id":"0017544"}}}


id: PBO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1 (predicted)","termid":"PBO:0018152"}


id: GO:0061363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the biosynthesis of progesterone biosynthesis that contributes to luteolysis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of progesterone biosynthetic process","termid":"GO:2000183"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of progesterone biosynthesis involved in luteolysis","synonyms":[{"name":"functional luteolysis","type":"exact"}],"termid":"GO:0061363"}


id: PBO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single-stranded DNA binding protein Rim1","termid":"PBO:0002293"}


id: CHEBI:16708
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine","termid":"CHEBI:16708"}


id: GO:0120513
data:
  {"annotated_genes":["SJAG_01058","SJAG_04085"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105619,110085],"is_not":false,"summary":null,"term":"GO:0120513"}]},"cv_name":"cellular_component","definition":"A protein complex capable of catalysing the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L-methionine (SAM) to the histidine residue of translation elongation factor 2 (EF2), which is the first step in the biosynthesis of diphthamide. The complex is a Dph2 homodimer in archaea and a Dph1-Dph2 heterodimer in eukaryotes.","definition_xrefs":["PMID:31463593","GOC:sjm","PMID:24422557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"2-(3-amino-3-carboxypropyl)histidine synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dph1-Dph2 complex","type":"exact"}],"termid":"GO:0120513","terms_by_termid":{"GO:0120513":null}}


id: GO:0007023
data:
  {"annotated_genes":["SJAG_01526","SJAG_04074","SJAG_02672","SJAG_02270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60992,65540,67466,93851],"is_not":false,"summary":null,"term":"GO:0007023"}]},"cv_name":"biological_process","definition":"Completion of folding of alpha- and beta-tubulin; takes place subsequent to chaperonin-mediated partial folding; mediated by a complex of folding cofactors.","definition_xrefs":["PMID:10542094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01526":null,"SJAG_02270":null,"SJAG_02672":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006457","GO:0051604"],"is_obsolete":false,"name":"post-chaperonin tubulin folding pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-389977"],"termid":"GO:0007023","terms_by_termid":{"GO:0007023":null}}


id: GO:0120283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein serine/threonine kinase.","definition_xrefs":["GOC:sl","GOC:krc","PMID:28608965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"protein serine/threonine kinase binding","termid":"GO:0120283"}


id: GO:1905463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA duplex unwinding.","definition_xrefs":["PMID:26503245","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA duplex unwinding (obsolete GO:1905463)","synonyms":[{"name":"down regulation of DNA duplex unwinding","type":"exact"},{"name":"down regulation of DNA unwinding","type":"exact"},{"name":"down regulation of duplex DNA melting","type":"exact"},{"name":"down-regulation of DNA duplex unwinding","type":"exact"},{"name":"down-regulation of DNA unwinding","type":"exact"},{"name":"down-regulation of duplex DNA melting","type":"exact"},{"name":"downregulation of DNA duplex unwinding","type":"exact"},{"name":"downregulation of DNA unwinding","type":"exact"},{"name":"downregulation of duplex DNA melting","type":"exact"},{"name":"inhibition of DNA duplex unwinding","type":"narrow"},{"name":"inhibition of DNA unwinding","type":"narrow"},{"name":"inhibition of duplex DNA melting","type":"narrow"},{"name":"negative regulation of DNA unwinding","type":"exact"},{"name":"negative regulation of duplex DNA melting","type":"exact"}],"termid":"GO:1905463"}


id: MONDO:0030318
data:
  {"annotated_genes":["SJAG_04533","SJAG_03393"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86687,86688],"is_not":false,"summary":null,"term":"MONDO:0030318"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03393":null,"SJAG_04533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543620","OMIM:619405","MEDGEN:1778853","DOID:0070411"],"synonyms":[{"name":"SCAR30","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 30","type":"exact"}],"termid":"MONDO:0030318","terms_by_termid":{"MONDO:0030318":null},"xrefs":{"Monarch":{"xref_id":"0030318"}}}


id: GO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection in B cells. Mechanisms of negative selection include anergy and deletion.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell negative selection","synonyms":[{"name":"B lymphocyte negative selection","type":"exact"},{"name":"B-cell negative selection","type":"exact"},{"name":"B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002352"}


id: PBO:0069357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 617, pseudogene","termid":"PBO:0069357"}


id: PR:Q9P7V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec72 gene.","definition_xrefs":["UniProtKB:Q9P7V5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.01c","synonyms":[{"name":"Spom972h-sec72","type":"exact"}],"termid":"PR:Q9P7V5"}


id: PBO:0049560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 26","termid":"PBO:0049560"}


id: GO:0046457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prostanoids, any compound based on or derived from the prostanoate structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"prostanoid metabolic process","termid":"GO:0006692"},{"relation_name":"is_a","term_name":"icosanoid biosynthetic process","termid":"GO:0046456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prostanoid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-2162123","Wikipedia:Prostanoid#Biosynthesis"],"synonyms":[{"name":"prostanoid anabolism","type":"exact"},{"name":"prostanoid biosynthesis","type":"exact"},{"name":"prostanoid formation","type":"exact"},{"name":"prostanoid synthesis","type":"exact"}],"termid":"GO:0046457"}


id: GO:0098763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic cell cycle phase","termid":"GO:0098763"}


id: GO:0008188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuropeptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuropeptide receptor activity","termid":"GO:0008188"}


id: PBO:0088109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; upregulated under glucose starvation; delivered to the vacuole in a novel pathway separate from the secretory pathway","termid":"PBO:0088109"}


id: PBO:0053421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 363","termid":"PBO:0053421"}


id: PR:O13713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear polyadenylated RNA-binding protein nab2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.06c","synonyms":[{"name":"Spom972h-nab2","type":"exact"}],"termid":"PR:O13713"}


id: PBO:0065120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C zeta","termid":"PBO:0065120"}


id: MONDO:0100447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the AFT6 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ATF6-related retinopathy","synonyms":[{"name":"ACHM7","type":"narrow"},{"name":"ATF6 achromatopsia","type":"narrow"},{"name":"ATF6 retinopathy","type":"exact"},{"name":"ATF6-related retinopathy","type":"exact"},{"name":"achromatopsia 7","type":"narrow"},{"name":"achromatopsia caused by mutation in ATF6","type":"narrow"},{"name":"achromatopsia type 7","type":"narrow"}],"termid":"MONDO:0100447","xrefs":{"Monarch":{"xref_id":"0100447"}}}


id: GO:1900376
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900376","terms_by_termid":{"GO:1905569":null}}


id: FYPO:0001395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal activation of monopolar cell growth","synonyms":[{"name":"normal activation of monopolar vegetative cell growth","type":"exact"},{"name":"normal initiation of growth from old end following cell division","type":"exact"}],"termid":"FYPO:0001395"}


id: PR:O13637
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec31A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02845","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.20c","secondary_identifiers":["UniProtKB:O13637"],"synonyms":[{"name":"Spom972h-SEC31A","type":"exact"}],"termid":"PR:O13637"}


id: GO:0042245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the repair of damaged RNA.","definition_xrefs":["PMID:11000254","UniProtKB-KW:KW-0692","PMID:11070075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA repair","termid":"GO:0042245"}


id: PBO:0079273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39D, pseudogene","termid":"PBO:0079273"}


id: GO:1903614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. 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id: GO:0043905
data:
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id: PBO:0044883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 10","termid":"PBO:0044883"}


id: FYPO:0008073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the assembly of a RITS complex in the vegetative growth phase of the life cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19394293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RITS complex assembly","termid":"FYPO:0008073"}


id: PBO:0064579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B","termid":"PBO:0064579"}


id: MONDO:1010062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia, non-human animal","termid":"MONDO:1010050"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia due to 11-beta hydroxylase deficiency, non-human animal","secondary_identifiers":["OMIA:001661"],"termid":"MONDO:1010062","xrefs":{"Monarch":{"xref_id":"1010062"}}}


id: SO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: PBO:0113324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase primarily involved in telomere length regulation; contributes to cell cycle checkpoint control in response to DNA damage; binds to phosphatidylinositol-4-phosphate; acts with Red1p and Mec1p to promote interhomolog recombination by phosphorylation of Hop1; functionally redundant with Mec1p; regulates P-body formation induced by replication stress; homolog of human ataxia-telangiectasia mutated (ATM) gene","termid":"PBO:0113324"}


id: PBO:0089390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp11","termid":"PBO:0089390"}


id: PBO:0057920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622b","termid":"PBO:0057920"}


id: GO:0043318
data:
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id: GO:1903046
data:
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id: PBO:0016960
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin DeAcetylase","termid":"PBO:0016960"}


id: MONDO:1011656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysplasia syndrome, non-human animal","secondary_identifiers":["OMIA:002090"],"termid":"MONDO:1011656","xrefs":{"Monarch":{"xref_id":"1011656"}}}


id: PBO:0054970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2384","termid":"PBO:0054970"}


id: PBO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK/STY/LAMMEr subfamily","termid":"PBO:0000517"}


id: PBO:0005474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Naa15 (predicted)","termid":"PBO:0005474"}


id: PBO:0029104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_lysine_level","termid":"PBO:0029104"}


id: GO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine released from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by norepinephrine","termid":"GO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by neuronal norepinephrine","synonyms":[{"name":"positive regulation of heart rate by neuronal noradrenaline","type":"exact"}],"termid":"GO:0003113"}


id: GO:2001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"}


id: GO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-b2, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-b2 complex","synonyms":[{"name":"Pcdhga1-Pcdhgb2 complex","type":"narrow"}],"termid":"GO:0071186"}


id: PBO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-thialysine","termid":"PBO:0030143"}


id: GO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"positively_regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell differentiation","synonyms":[{"name":"activation of endothelial cell differentiation","type":"narrow"},{"name":"stimulation of endothelial cell differentiation","type":"narrow"},{"name":"up regulation of endothelial cell differentiation","type":"exact"},{"name":"up-regulation of endothelial cell differentiation","type":"exact"},{"name":"upregulation of endothelial cell differentiation","type":"exact"}],"termid":"GO:0045603"}


id: PBO:0029402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029402"}


id: FYPO:0006679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chromium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on chromium","synonyms":[{"name":"normal cell population growth in presence of chromium","type":"exact"},{"name":"normal cell population growth on chromium","type":"exact"},{"name":"normal cell population growth on chromium ion","type":"exact"},{"name":"normal cellular response to chromium","type":"related"},{"name":"normal growth on chromium ions","type":"exact"},{"name":"normal vegetative cell population growth on chromium","type":"exact"}],"termid":"FYPO:0006679"}


id: MONDO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare abnormality of the neuroendocrine system that is characterized by episodic nausea and vomiting.","definition_xrefs":["PMID:22634989","PMID:25332060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine disorder","termid":"MONDO:0100070"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic vomiting syndrome","secondary_identifiers":["MEDGEN:57509","NANDO:2200919","OMIM:500007","UMLS:C0152164","NANDO:2100258","icd11.foundation:1434288855"],"synonyms":[{"name":"CVS","type":"related"},{"name":"Cvs-plus","type":"related"},{"name":"cyclic vomiting syndrome","type":"exact"},{"name":"cyclic vomiting syndrome with neuromuscular disease","type":"related"},{"name":"cyclic vomiting syndrome-plus","type":"related"}],"termid":"MONDO:0010778","xrefs":{"Monarch":{"xref_id":"0010778"}}}


id: GO:0046663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a leading edge cell, the dorsal-most cells of the epidermis that migrates during dorsal closure.","definition_xrefs":["GOC:ai","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell differentiation","termid":"GO:0035026"},{"relation_name":"part_of","term_name":"initiation of dorsal closure","termid":"GO:0007392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell differentiation","termid":"GO:0046663"}


id: GO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new neuromast sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"neuromast regeneration","termid":"GO:0070657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell differentiation involved in neuromast regeneration","termid":"GO:0070658"}


id: PBO:0003612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim50 (predicted)","termid":"PBO:0003612"}


id: PBO:0084663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-oxoacyl-[acyl-carrier-protein] reductase; may comprise a type II mitochondrial fatty acid synthase along with Mct1p; human homolog CBR4 complements yeast null mutant","termid":"PBO:0084663"}


id: MONDO:0010428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria (see this term), an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures.","definition_xrefs":["Orphanet:217377"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome X","termid":"MONDO:0017009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome Xp11.23-p11.22 duplication syndrome","secondary_identifiers":["DOID:0060461","MEDGEN:440690","UMLS:C2749022","GARD:12766","MESH:C567585","SCTID:721881008","OMIM:300801","DECIPHER:89"],"synonyms":[{"name":"Xp11.22-p11.23 Microduplication","type":"exact"},{"name":"chromosome Xp11.23-p11.22 duplication syndrome","type":"exact"},{"name":"chromosome xp11.23-p11.22 duplication syndrome, X-linked dominant","type":"exact"},{"name":"microduplication Xp11.22-p11.23 syndrome","type":"exact"},{"name":"trisomy Xp11.22-p11.23","type":"exact"}],"termid":"MONDO:0010428","xrefs":{"Monarch":{"xref_id":"0010428"}}}


id: MONDO:0021582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A flat, benign, pigmented spot on the skin caused by excessive deposition of melanin from an increased number of melanocytes in the cell layer directly above the basement membrane of the epidermis. Formation is usually related to sun exposure during youth, and the lesions do not typically progress to malignancy.","definition_xrefs":["NCIT:C3159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lentigo","secondary_identifiers":["SCTID:402624000","UMLS:C0023321","MESH:D007911","OMIM:150900","MEDGEN:7301"],"synonyms":[{"name":"lentigines","type":"exact"},{"name":"lentiginosis","type":"exact"},{"name":"lentigo","type":"exact"}],"termid":"MONDO:0021582","xrefs":{"Monarch":{"xref_id":"0021582"}}}


id: GO:0033955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which copies of the mitochondrial genome are distributed into daughter mitochondria upon mitochondrial fission.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial DNA inheritance (obsolete GO:0033955)","synonyms":[{"name":"mitochondrial DNA segregation","type":"related"},{"name":"mitochondrial chromosome segregation","type":"related"}],"termid":"GO:0033955"}


id: GO:1904330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast contraction.","definition_xrefs":["PMID:19239477","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"is_a","term_name":"regulation of myofibroblast contraction","termid":"GO:1904328"},{"relation_name":"positively_regulates","term_name":"myofibroblast contraction","termid":"GO:1990764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast contraction","synonyms":[{"name":"activation of MF contraction","type":"narrow"},{"name":"activation of MFB contraction","type":"narrow"},{"name":"activation of myofibroblast contraction","type":"narrow"},{"name":"positive regulation of MF contraction","type":"exact"},{"name":"positive regulation of MFB contraction","type":"exact"},{"name":"up regulation of MF contraction","type":"exact"},{"name":"up regulation of MFB contraction","type":"exact"},{"name":"up regulation of myofibroblast contraction","type":"exact"},{"name":"up-regulation of MF contraction","type":"exact"},{"name":"up-regulation of MFB contraction","type":"exact"},{"name":"up-regulation of myofibroblast contraction","type":"exact"},{"name":"upregulation of MF contraction","type":"exact"},{"name":"upregulation of MFB contraction","type":"exact"},{"name":"upregulation of myofibroblast contraction","type":"exact"}],"termid":"GO:1904330"}


id: PR:O94259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp16 gene.","definition_xrefs":["UniProtKB:O94259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.10c","synonyms":[{"name":"Spom972h-utp16","type":"exact"},{"name":"U3 snoRNA-associated protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94259"}


id: GO:0140834
data:
  {"annotated_genes":["SJAG_03967","SJAG_03061","SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94703,96169,109421],"is_not":false,"summary":null,"term":"GO:0140834"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphoserine (position 2).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00342":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0016740","GO:0016301","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S2 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain S2 kinase activity","type":"exact"}],"termid":"GO:0140834","terms_by_termid":{"GO:0140834":null}}


id: MONDO:1012171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contracture and chondrodysplasia, non-human animal","termid":"MONDO:1011947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle contracture and chondrodysplasia, cattle","secondary_identifiers":["OMIA:000675-9913"],"termid":"MONDO:1012171","xrefs":{"Monarch":{"xref_id":"1012171"}}}


id: PBO:0082638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug2p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082638"}


id: GO:0180042
data:
  {"annotated_genes":["SJAG_01080","SJAG_01319","SJAG_03442"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89461,107051,114904],"is_not":false,"summary":null,"term":"GO:0180042"}]},"cv_name":"biological_process","definition":"The directed movement of polyphosphate into the vacuole across the vacuolar membrane.","definition_xrefs":["PMID:37066886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01080":null,"SJAG_01319":null,"SJAG_03442":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"polyphosphate import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180042","terms_by_termid":{"GO:0180042":null}}


id: GO:0046569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxal + O2 + H2O = glyoxalate + H2O2.","definition_xrefs":["PMID:11733005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyoxal oxidase activity","synonyms":[{"name":"GLOX","type":"exact"}],"termid":"GO:0046569"}


id: GO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.","definition_xrefs":["EC:1.1.5.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:RXN-15745","Reactome:R-HSA-188467","RHEA:18977"],"synonyms":[{"name":"FAD-dependent glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"L-glycerophosphate dehydrogenase activity","type":"related"},{"name":"flavin-linked glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"glycerol-3-phosphate CoQ reductase","type":"related"},{"name":"glycerophosphate dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0004368"}


id: PBO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family","termid":"PBO:0002012"}


id: PBO:0045141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 10","termid":"PBO:0045141"}


id: MONDO:0018653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polymerase proofreading-related adenomatous polyposis","secondary_identifiers":["Orphanet:447877","MEDGEN:51342","NCIT:C162484","GARD:17772","UMLS:C0130294"],"synonyms":[{"name":"PPAP","type":"exact"},{"name":"Polymerase proofreading-related adenomatous polyposis","type":"exact"}],"termid":"MONDO:0018653","xrefs":{"Monarch":{"xref_id":"0018653"}}}


id: PBO:0088562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase DHRS3 family, implicated in lipid (isoprenoid) metabolism","termid":"PBO:0088562"}


id: MONDO:0016391
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86774,86773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"}]},"cv_name":"mondo","definition":"Neonatal diabetes mellitus presents as hyperglycemia, failure to thrive and, in some cases, dehydration and ketoacidosis which may be severe with coma, in a child within the first months of life.","definition_xrefs":["Orphanet:224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic diabetes","termid":"MONDO:0015967"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"neonatal diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1217915084","NCIT:C99248","UMLS:C0158981","NANDO:2200463","GARD:18682","DOID:11717","ICD9:775.1","MedDRA:10028933","MEDGEN:57645","SCTID:49817004","ICD10CM:P70.2"],"synonyms":[{"name":"NDM","type":"exact"},{"name":"congenital diabetes mellitus","type":"exact"},{"name":"diabetes mellitus syndrome in newborn infant","type":"exact"}],"termid":"MONDO:0016391","terms_by_termid":{"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0016391"}}}


id: MONDO:0012494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular microlithiasis","secondary_identifiers":["MESH:C566478","HP:0012215","MEDGEN:355854","OMIM:610441","UMLS:C1864873"],"synonyms":[{"name":"testicular microlithiasis","type":"exact"},{"name":"testicular microlithiasis (disease)","type":"exact"}],"termid":"MONDO:0012494","xrefs":{"Monarch":{"xref_id":"0012494"}}}


id: GO:0106396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["GOC:ha","PMID:22878552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell fate commitment","termid":"GO:0106396"}


id: FYPO:0004382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a single kinetochore becomes attached to both spindle poles, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000337","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"meroterically attached lagging mitotic chromosomes","synonyms":[{"name":"abnormal mitotic sister chromatid segregation, with merotelic kinetochore attachment and lagging mitotic chromosomes","type":"exact"},{"name":"lagging mitotic chromosomes with merotelic kinetochore attachment","type":"exact"},{"name":"lagging mitotic sister chromatids, with merotelic kinetochore attachment","type":"exact"},{"name":"merotelic kinetochore attachment with lagging mitotic chromosomes","type":"exact"},{"name":"meroterically attached lagging mitotic chromosomes during mitotic cell cycle","type":"related"},{"name":"meroterically attached lagging mitotic chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0004382"}


id: GO:0007260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:10918594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"part_of","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042505","GO:0042507","GO:0042508","GO:0042506","GO:0042503","GO:0042504","GO:0042502"],"synonyms":[{"name":"tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0007260"}


id: MONDO:0000861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tubular aggregate myopathy (obsolete MONDO:0000861)","termid":"MONDO:0000861","xrefs":{"Monarch":{"xref_id":"0000861"}}}


id: GO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining CRISPR repeat clusters, including capture of new spacer elements, expansion or contraction of clusters, propagation of the leader sequence and repeat clusters within a genome, transfer of repeat clusters and CRISPR-associated (cas) genes to new genomes, transcription of the CRISPR repeat arrays into RNA and processing, and interaction of CRISPR/cas loci with the host genome. CRISPR (clustered regularly interspaced short palindromic repeat) elements are a family of sequence elements containing multiple direct repeats of 24-48 bp with weak dyad symmetry which are separated by regularly sized nonrepetitive spacer sequences.","definition_xrefs":["PMID:16292354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of CRISPR repeat elements","synonyms":[{"name":"CRISPR element metabolic process","type":"related"},{"name":"CRISPR element metabolism","type":"related"},{"name":"maintenance of clustered regularly interspaced short palindromic repeat elements","type":"exact"}],"termid":"GO:0043571"}


id: GO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-glucarate, the D-enantiomer of glucarate, from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729","GOC:mah","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldarate transmembrane transporter activity","termid":"GO:0042876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-glucarate transmembrane transporter activity","termid":"GO:0042878"}


id: PR:Q9C0Y6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH-dependent curcumin reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein PB24D3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.08c","secondary_identifiers":["UniProtKB:Q9C0Y6"],"synonyms":[{"name":"Spom972h-curA","type":"exact"}],"termid":"PR:Q9C0Y6"}


id: PBO:0062284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 1","termid":"PBO:0062284"}


id: GO:1903965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monounsaturated fatty acid.","definition_xrefs":["PMID:16443825","GO_REF:0000068","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"monounsaturated fatty acid metabolic process","termid":"GO:1903964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monounsaturated fatty acid catabolic process","synonyms":[{"name":"monounsaturated fatty acid breakdown","type":"exact"},{"name":"monounsaturated fatty acid catabolism","type":"exact"},{"name":"monounsaturated fatty acid degradation","type":"exact"}],"termid":"GO:1903965"}


id: PBO:0050427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H3 pseudogene 1","termid":"PBO:0050427"}


id: GO:1990150
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric, extracellular protein complex containing two VEGF-A monomers. Binds to and activates a receptor tyrosine kinase.","definition_xrefs":["GOC:bhm","PMID:19658168","GOC:bf","PMID:12207021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor complex","termid":"GO:0036454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"VEGF-A complex","synonyms":[{"name":"vascular endothelial growth factor A complex","type":"exact"}],"termid":"GO:1990150"}


id: PR:O59731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C3E7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.11c","synonyms":[{"name":"Spom972h-SPBC3E7.11c","type":"exact"}],"termid":"PR:O59731"}


id: PBO:0041102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basigin (Ok blood group)","termid":"PBO:0041102"}


id: PBO:0071147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 11","termid":"PBO:0071147"}


id: GO:2000363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of prostaglandin-E synthase activity (obsolete GO:2000363)","synonyms":[{"name":"positive regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"positive regulation of PGE isomerase activity","type":"exact"},{"name":"positive regulation of PGE2 isomerase activity","type":"exact"},{"name":"positive regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"positive regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"positive regulation of endoperoxide isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000363"}


id: MONDO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephalic primordial dwarfism due to RTTN deficiency is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by primary microcephaly, profound short stature, moderate to severe intellectual disability, global developmental delay, craniofacial dysmorphism (e.g. sloping forehead, high and broad nasal bridge) and variable brain malformations, including simplified gyration, pachygyria, polymicrogyria, reduced sulcation, dysgenesis of corpus callosum and deformed ventricles. Renal anomalies, bilateral hearing loss, multiple joint contractures, severe failure to thrive and a sacral lesion cephalad to the gluteal crease have also been reported.","definition_xrefs":["Orphanet:468631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic primordial dwarfism due to RTTN deficiency","secondary_identifiers":["GARD:17841","MEDGEN:766745","OMIM:614833","UMLS:C3553831"],"termid":"MONDO:0018764","xrefs":{"Monarch":{"xref_id":"0018764"}}}


id: MONDO:0009562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-mannosidosis is a very rare lysosomal storage disease characterized by developmental delay of varying severity and hearing loss, but that can manifest a wide phenotypic heterogeneity.","definition_xrefs":["Orphanet:118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"beta-mannosidosis","secondary_identifiers":["icd11.foundation:1578707401","UMLS:C4048196","NCIT:C84596","ICD9:271.8","DOID:3633","NANDO:1200129","OMIM:248510","GARD:869","MEDGEN:888408","MESH:D044905","NANDO:2201190","SCTID:238047006"],"synonyms":[{"name":"Beta-D-mannosidosis","type":"exact"},{"name":"Beta-mannosidase deficiency","type":"exact"},{"name":"MANSB","type":"related"},{"name":"beta-mannosidase deficiency","type":"exact"},{"name":"beta-mannosidosis","type":"exact"},{"name":"lysosomal Beta-mannosidase deficiency","type":"related"},{"name":"lysosomal beta-mannosidase deficiency","type":"exact"},{"name":"mannosidosis, BETA A, lysosomal","type":"related"},{"name":"mannosidosis, beta","type":"exact"}],"termid":"MONDO:0009562","xrefs":{"Monarch":{"xref_id":"0009562"}}}


id: PBO:0088352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldo-keto reductase family protein","termid":"PBO:0088352"}


id: GO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuromedin B receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuromedin B receptor binding","synonyms":[{"name":"neuromedin B receptor ligand","type":"narrow"}],"termid":"GO:0031710"}


id: PBO:0082417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional enzyme of 'de novo' purine nucleotide pathway; contains both phosphoribosylglycinamidine synthetase/glycinamide ribotide synthetase (EC 6.3.4.13) [\"Ade5\"] and phosphoribosylaminoimidazole synthetase/aminoimidazole ribotide synthetase (EC 6.3.3.1) [\"Ade7\"] activities","termid":"PBO:0082417"}


id: GO:0007011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytoskeleton (obsolete GO:0007011)","synonyms":[{"name":"regulation of cytoskeleton","type":"exact"}],"termid":"GO:0007011"}


id: MONDO:0010990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cd4/CD8 T-cell ratio (obsolete MONDO:0010990)","secondary_identifiers":["OMIM:601083"],"synonyms":[{"name":"Cd4/CD8 T-cell ratio","type":"exact"}],"termid":"MONDO:0010990","xrefs":{"Monarch":{"xref_id":"0010990"}}}


id: PBO:0076910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 2","termid":"PBO:0076910"}


id: GO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit mitochondrial RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["PMID:20701995","PMID:2088182","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"mitochondrial single-subunit type RNA polymerase binding","termid":"GO:0001001"}


id: GO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of a cytokine.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokine production","secondary_identifiers":["GO:0042108","GO:0050715"],"synonyms":[{"name":"activation of cytokine production","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process","type":"narrow"},{"name":"positive regulation of cytokine secretion","type":"narrow"},{"name":"stimulation of cytokine production","type":"narrow"},{"name":"up regulation of cytokine production","type":"exact"},{"name":"up-regulation of cytokine production","type":"exact"},{"name":"upregulation of cytokine production","type":"exact"}],"termid":"GO:0001819"}


id: PBO:0060600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit G2","termid":"PBO:0060600"}


id: PBO:0068273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 10 (inactive)","termid":"PBO:0068273"}


id: GO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of insulin secretion","secondary_identifiers":["Reactome:R-HSA-422356"],"termid":"GO:0050796"}


id: GO:1902914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein polyubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:di","GOC:TermGenie","PMID:23645667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"regulates","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein polyubiquitination","synonyms":[{"name":"regulation of polyubiquitin","type":"related"},{"name":"regulation of protein polyubiquitinylation","type":"exact"},{"name":"regulation of protein polyubiquitylation","type":"exact"}],"termid":"GO:1902914"}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: PBO:0053205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3 binding protein","termid":"PBO:0053205"}


id: MONDO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speech-sound disorder","secondary_identifiers":["MESH:C563928","UMLS:C4019167","OMIM:608445","MEDGEN:866372"],"synonyms":[{"name":"SSD","type":"related"},{"name":"speech-sound disorder","type":"exact"}],"termid":"MONDO:0012038","xrefs":{"Monarch":{"xref_id":"0012038"}}}


id: SO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the structure of the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:transcript_variant","type":"exact"},{"name":"VAAST:transcript_variant","type":"exact"},{"name":"snpEff:TRANSCRIPT","type":"exact"},{"name":"transcript variant","type":"exact"}],"termid":"SO:0001576"}


id: PBO:0117429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 pseudogene 4","termid":"PBO:0117429"}


id: PBO:0066706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 3","termid":"PBO:0066706"}


id: PBO:0040913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 17","termid":"PBO:0040913"}


id: GO:0035561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["PMID:20404130","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin binding (obsolete GO:0035561)","termid":"GO:0035561"}


id: GO:2000927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellodextrin catabolic process","synonyms":[{"name":"regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000927"}


id: PR:C6Y4A7
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc5 gene.","definition_xrefs":["UniProtKB:C6Y4A7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP4C9.02","synonyms":[{"name":"Spom972h-emc5","type":"exact"}],"termid":"PR:C6Y4A7"}


id: GO:0031420
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id: GO:0008471
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.","definition_xrefs":["EC:1.10.3.2"],"gene_count":0,"genotype_count":0,"name":"obsolete laccase activity (obsolete GO:0008471)","synonyms":[{"name":"benzenediol:oxygen oxidoreductase activity","type":"related"},{"name":"laccase activity","type":"exact"},{"name":"p-diphenol oxidase activity","type":"related"},{"name":"urishiol oxidase activity","type":"related"},{"name":"urushiol oxidase activity","type":"related"}],"termid":"GO:0008471"}


id: PBO:0062042
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 12","termid":"PBO:0062042"}


id: MONDO:0024305
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hyperprolactinemia (disease) that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperprolactinemia","termid":"MONDO:0005804"},{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired hyperprolactinemia","secondary_identifiers":["MESH:D002640","ICD10CM:E22.1","MESH:D006966","DOID:12700"],"synonyms":[{"name":"Chiari-Frommel syndrome","type":"related"},{"name":"acquired hyperprolactinemia (disease)","type":"exact"},{"name":"hyperprolactinemia","type":"related"},{"name":"pregnancy-related A-G syndrome","type":"exact"}],"termid":"MONDO:0024305","xrefs":{"Monarch":{"xref_id":"0024305"}}}


id: PBO:0066787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 86","termid":"PBO:0066787"}


id: PBO:0117105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFT1 glycolipid translocator homolog","termid":"PBO:0117105"}


id: GO:0075048
data:
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id: MONDO:0003456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bile duct mucinous cystic neoplasm (obsolete MONDO:0003456)","secondary_identifiers":["DOID:5469"],"termid":"MONDO:0003456","xrefs":{"Monarch":{"xref_id":"0003456"}}}


id: PBO:0044427
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 54, pseudogene","termid":"PBO:0044427"}


id: GO:0072089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell proliferation","termid":"GO:0072089"}


id: GO:0006676
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id: GO:0051640
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location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":182,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00031":null,"SJAG_00053":null,"SJAG_00082":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00171":null,"SJAG_00178":null,"SJAG_00207":null,"SJAG_00280":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00368":null,"SJAG_00380":null,"SJAG_00397":null,"SJAG_00418":null,"SJAG_00471":null,"SJAG_00594":null,"SJAG_00646":null,"SJAG_00655":null,"SJAG_00678":null,"SJAG_00727":null,"SJAG_00753":null,"SJAG_00756":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01391":null,"SJAG_01437":null,"SJAG_01449":null,"SJAG_01538":null,"SJAG_01564":null,"SJAG_01584":null,"SJAG_01598":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01633":null,"SJAG_01662":null,"SJAG_01697":null,"SJAG_01741":null,"SJAG_01745":null,"SJAG_01772":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_01925":null,"SJAG_01929":null,"SJAG_02045":null,"SJAG_02166":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02286":null,"SJAG_02299":null,"SJAG_02320":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02431":null,"SJAG_02451":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02587":null,"SJAG_02624":null,"SJAG_02626":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02698":null,"SJAG_02699":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02757":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_02837":null,"SJAG_02848":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03012":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03092":null,"SJAG_03103":null,"SJAG_03126":null,"SJAG_03170":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03247":null,"SJAG_03264":null,"SJAG_03268":null,"SJAG_03287":null,"SJAG_03299":null,"SJAG_03327":null,"SJAG_03347":null,"SJAG_03357":null,"SJAG_03416":null,"SJAG_03437":null,"SJAG_03449":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03552":null,"SJAG_03593":null,"SJAG_03673":null,"SJAG_03680":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03710":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03835":null,"SJAG_03848":null,"SJAG_03864":null,"SJAG_03882":null,"SJAG_03926":null,"SJAG_03938":null,"SJAG_03989":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04023":null,"SJAG_04040":null,"SJAG_04044":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04142":null,"SJAG_04143":null,"SJAG_04148":null,"SJAG_04221":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04308":null,"SJAG_04370":null,"SJAG_04379":null,"SJAG_04387":null,"SJAG_04391":null,"SJAG_04412":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04508":null,"SJAG_04597":null,"SJAG_04623":null,"SJAG_04721":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_04940":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05019":null,"SJAG_05184":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"organelle localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of organelle localization","type":"exact"},{"name":"organelle 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id: GO:0008240
data:
  {"annotated_genes":["SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74404],"is_not":false,"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of an N-terminal tripeptide from a polypeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"tripeptidyl-peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.4.14.10-RXN","EC:3.4.14.10"],"termid":"GO:0008240","terms_by_termid":{"GO:0008240":null}}


id: PBO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member B","termid":"PBO:0046934"}


id: MONDO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A marked difference between the individual's expressed/experienced gender and the gender others would assign him or her, and it must continue for at least six months. (from DSM-5)","definition_xrefs":["MESH:D000068116"],"gene_count":0,"genotype_count":0,"name":"obsolete gender dysphoria (obsolete MONDO:0001153)","secondary_identifiers":["ICD9:302.50","Orphanet:459690","DOID:10919","SCTID:93461009"],"synonyms":[{"name":"transsexualism","type":"related"}],"termid":"MONDO:0001153","xrefs":{"Monarch":{"xref_id":"0001153"}}}


id: GO:0004058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-amino acid + H+ = R-H + CO2.","definition_xrefs":["EC:4.1.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aromatic-L-amino-acid decarboxylase activity","secondary_identifiers":["GO:0016400","MetaCyc:AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN","Reactome:R-HSA-209859","Reactome:R-HSA-209924"],"synonyms":[{"name":"5-hydroxytryptophan decarboxylase activity","type":"narrow"},{"name":"DOPA decarboxylase activity","type":"narrow"},{"name":"L-DOPA decarboxylase activity","type":"narrow"},{"name":"aromatic amino acid decarboxylase activity","type":"related"},{"name":"aromatic-L-amino-acid carboxy-lyase (tryptamine-forming)","type":"narrow"},{"name":"aromatic-L-amino-acid carboxy-lyase activity","type":"related"},{"name":"hydroxytryptophan decarboxylase activity","type":"narrow"},{"name":"tryptophan decarboxylase activity","type":"narrow"}],"termid":"GO:0004058"}


id: MONDO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the rete testis","direct_ancestors":[{"relation_name":"is_a","term_name":"rete testis neoplasm","termid":"MONDO:0003562"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete testis adenocarcinoma","secondary_identifiers":["UMLS:C0863024","DOID:14544","MEDGEN:209023","NCIT:C8955"],"synonyms":[{"name":"adenocarcinoma of rete testis","type":"exact"},{"name":"adenocarcinoma of the rete testis","type":"exact"},{"name":"carcinoma, rete testis, malignant","type":"exact"},{"name":"rete testis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001992","xrefs":{"Monarch":{"xref_id":"0001992"}}}


id: MONDO:0014976
data:
  {"annotated_genes":["SJAG_01004"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87348],"is_not":false,"summary":null,"term":"MONDO:0014976"}]},"cv_name":"mondo","definition":"Lethal left ventricular non-compaction-seizures-hypotonia-cataract-developmental delay syndrome is rare, genetic, neurometabolic disease characterized by global developmental delay, severe hypotonia, seizures, cataracts, cardiomyopathy (including left or bi-ventricular hypertrophy, dilated cardiomyopathy) and left ventricular non-compaction, typically resulting in infantile or early-childhood death. Patients usually present metabolic lactic acidosis, failure to thrive, head lag, respiratory problems and decrease in respiratory chain complex activity. Highly variable cerebral abnormalities have been reported and include microcephaly, prominent extra-axial cerebrospinal fluid spaces, diffuse neuronal loss and cortical/white matter gliosis.","definition_xrefs":["Orphanet:478049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"lethal left ventricular non-compaction-seizures-hypotonia-cataract-developmental delay syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934628","OMIM:617228","DOID:0111488","GARD:17865","UMLS:C4310661"],"synonyms":[{"name":"COXPD31","type":"exact"},{"name":"MIPEP combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 31","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MIPEP","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 31","type":"exact"}],"termid":"MONDO:0014976","terms_by_termid":{"MONDO:0014976":null},"xrefs":{"Monarch":{"xref_id":"0014976"}}}


id: MONDO:0008856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency 27A","secondary_identifiers":["OMIM:209950","DOID:0111955","MEDGEN:860386","NCIT:C176806","UMLS:C4011949"],"synonyms":[{"name":"IFNGR1 deficiency, autosomal recessive","type":"related"},{"name":"IMD27A","type":"related"},{"name":"atypical mycobacterial infection, disseminated","type":"related"},{"name":"atypical mycobacterial infection, familial disseminated","type":"related"},{"name":"atypical mycobacteriosis, familial","type":"related"},{"name":"immunodeficiency 27A","type":"exact"},{"name":"immunodeficiency 27A, Mycobacteriosis, autosomal recessive","type":"related"},{"name":"immunodeficiency 27A, mycobacteriosis, AR","type":"exact"},{"name":"immunodeficiency type 27A","type":"exact"},{"name":"mycobacterial disease, Mendelian susceptibility to","type":"related"}],"termid":"MONDO:0008856","xrefs":{"Monarch":{"xref_id":"0008856"}}}


id: FYPO:0005235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is abolished.","definition_xrefs":["PMID:21945095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at stalled replication fork","synonyms":[{"name":"abolished protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at stalled replication fork during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005235"}


id: MONDO:0023005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double uterus-hemivagina-renal agenesis","secondary_identifiers":["MEDGEN:928221","UMLS:C4302552"],"termid":"MONDO:0023005","xrefs":{"Monarch":{"xref_id":"0023005"}}}


id: GO:0036479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of peroxidase.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0003674","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"peroxidase inhibitor activity","termid":"GO:0036479"}


id: GO:0036508
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"The removal of one or more alpha 1,2-linked mannose residues from a mannosylated protein.","definition_xrefs":["PMID:21062743","GOC:PARL","PMID:25092655","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demannosylation","termid":"GO:0036507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein alpha-1,2-demannosylation","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"glycoprotein mannose trimming","type":"related"},{"name":"mannose trimming","type":"broad"}],"termid":"GO:0036508","terms_by_termid":{"GO:1904380":null}}


id: MONDO:0015133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete quantitative and/or qualitative congenital phagocyte defect (obsolete MONDO:0015133)","secondary_identifiers":["Orphanet:101985"],"termid":"MONDO:0015133","xrefs":{"Monarch":{"xref_id":"0015133"}}}


id: PBO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 92 pseudogene","termid":"PBO:0070177"}


id: MONDO:0012173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency (LCHADD) is a mitochondrial disorder of long chain fatty acid oxidation characterized in most patients by onset in infancy/ early childhood with hypoketotic hypoglycemia, metabolic acidosis, liver disease, hypotonia and frequently cardiac involvement with arrhythmias and/or cardiomyopathy.","definition_xrefs":["Orphanet:5"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"3-hydroxyacyl-CoA dehydrogenase deficiency","termid":"MONDO:0017715"},{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0005244","MONDO:0002525"],"is_obsolete":false,"name":"long chain 3-hydroxyacyl-CoA dehydrogenase deficiency","secondary_identifiers":["OMIM:609016","NCIT:C129929","SCTID:726021008","MEDGEN:778253","UMLS:C3711645","GARD:6867","icd11.foundation:760613381"],"synonyms":[{"name":"3-hydroxyacyl-CoA dehydrogenase long chain deficiency","type":"related"},{"name":"HELLP syndrome, maternal, of pregnancy","type":"exact"},{"name":"LCHAD deficiency","type":"exact"},{"name":"LCHADD","type":"exact"},{"name":"fatty liver, acute, of pregnancy","type":"exact"},{"name":"long chain 3-hydroxyacyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"long-chain 3-OH acyl-CoA dehydrogenase deficiency","type":"related"},{"name":"long-chain 3-hydroxy acyl CoA dehydrogenase deficiency","type":"related"},{"name":"long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency","type":"related"},{"name":"long-chain 3-hydroxyacyl-coenzyme A dehydrogenase deficiency","type":"exact"},{"name":"trifunctional protein deficiency type 1","type":"related"}],"termid":"MONDO:0012173","xrefs":{"Monarch":{"xref_id":"0012173"}}}


id: PBO:0028655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_snRNA_3'-end_processing","termid":"PBO:0028655"}


id: MONDO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovalocytosis, hereditary hemolytic, with defective erythropoiesis","secondary_identifiers":["UMLS:C1833689","OMIM:166910","MEDGEN:322255","MESH:C563479"],"synonyms":[{"name":"ovalocytosis, hereditary hemolytic, with defective erythropoiesis","type":"exact"}],"termid":"MONDO:0008166","xrefs":{"Monarch":{"xref_id":"0008166"}}}


id: PBO:0042243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR5 antisense RNA","termid":"PBO:0042243"}


id: MONDO:1010977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, pig","secondary_identifiers":["OMIA:000485-9823"],"termid":"MONDO:1010977","xrefs":{"Monarch":{"xref_id":"1010977"}}}


id: SO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a chromoplast, a colored plastid for synthesis and storage of pigments.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_sequence","synonyms":[{"name":"chromoplast sequence","type":"exact"}],"termid":"SO:0000744"}


id: PBO:0082977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin reductase; key regulatory enzyme that determines the redox state of the thioredoxin system, which acts as a disulfide reductase system and protects cells against both oxidative and reductive stress; protein abundance increases in response to DNA replication stress; TRR1 has a paralog, TRR2, that arose from the whole genome duplication","termid":"PBO:0082977"}


id: PR:O94500
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11780:SF0","PRO:DNx","OMA:SCHPO03130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase 51 kDa subunit homolog SPBC18E5.10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.10","secondary_identifiers":["UniProtKB:O94500"],"synonyms":[{"name":"Spom972h-NDUFV1","type":"exact"}],"termid":"PR:O94500"}


id: MONDO:0002690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningioma (obsolete MONDO:0002690)","termid":"MONDO:0002690","xrefs":{"Monarch":{"xref_id":"0002690"}}}


id: PBO:0116714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH eRNA associated with R-loop formation 1","termid":"PBO:0116714"}


id: FYPO:0000107
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119573,119574,119947,119948],"is_not":false,"summary":null,"term":"FYPO:0000107"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to latrunculin A. Cells stop growing (and may die) at a concentration of latrunculin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to latrunculin A","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta","sty1delta"],"synonyms":[{"name":"hypersensitive to latrunculin A","type":"exact"},{"name":"sensitive to LAT-A","type":"exact"},{"name":"sensitive to LatA","type":"exact"},{"name":"sensitive to latrunculin A during mitotic cell cycle","type":"related"},{"name":"sensitive to latrunculin A during vegetative growth","type":"exact"}],"termid":"FYPO:0000107","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000107":null,"FYPO_EXT:0000001":null}}


id: PBO:0086323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hydroxymethylpyrimidine phosphate kinases; member of a gene family with THI20 and THI21; not required for thiamine biosynthesis; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086323"}


id: PBO:0069045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 290, pseudogene","termid":"PBO:0069045"}


id: GO:0071259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnetism","termid":"GO:0071000"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnetism","synonyms":[{"name":"cellular response to magnetic stimulus","type":"exact"}],"termid":"GO:0071259"}


id: MONDO:0017431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic limb overgrowth (obsolete MONDO:0017431)","secondary_identifiers":["Orphanet:294953"],"synonyms":[{"name":"limb overgrowth","type":"related"}],"termid":"MONDO:0017431","xrefs":{"Monarch":{"xref_id":"0017431"}}}


id: PR:Q10490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02145","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.13c","secondary_identifiers":["UniProtKB:Q10490"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10490"}


id: GO:0005460
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76362],"is_not":false,"summary":null,"term":"GO:0005460"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucose from one side of a membrane to the other. UDP-glucose is a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"UDP-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005460","terms_by_termid":{"GO:0005460":null}}


id: GO:0048750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compound eye corneal lens are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"},{"relation_name":"part_of","term_name":"compound eye corneal lens development","termid":"GO:0048058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens morphogenesis","termid":"GO:0048750"}


id: MONDO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that involves the lungs, abdominal viscera, bones and or central nervous system.","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic mycosis","secondary_identifiers":["DOID:0050136","SCTID:399314004","ICD9:117.9","MEDGEN:639956","UMLS:C0553576"],"synonyms":[{"name":"systemic fungal infection","type":"related"}],"termid":"MONDO:0000256","xrefs":{"Monarch":{"xref_id":"0000256"}}}


id: PBO:0077270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 11","termid":"PBO:0077270"}


id: MONDO:0008917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart defects limb shortening is an association disorder combining congenital heart malformation and skeletal dysplasia (including coronal clefting of the vertebral bodies and short limbs). It has been described only once in the literature, in two male sibs from Kuwaiti first-cousins. The clinical and radiological features of these patients were reported as a distinct cardioskeletal syndrome.","definition_xrefs":["Orphanet:1354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267"],"is_obsolete":false,"name":"heart defects-limb shortening syndrome","secondary_identifiers":["GARD:2613","MEDGEN:349142","MESH:C535850","UMLS:C1859327","OMIM:212135","SCTID:721009008"],"synonyms":[{"name":"cardioskeletal syndrome kuwaiti type","type":"related"},{"name":"cardioskeletal syndrome, KUWAITI type","type":"related"},{"name":"heart defect and limb shortening syndrome","type":"exact"},{"name":"heart defects and limb shortening","type":"related"}],"termid":"MONDO:0008917","xrefs":{"Monarch":{"xref_id":"0008917"}}}


id: PBO:0045254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1","termid":"PBO:0045254"}


id: PBO:0085841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YDL129W is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085841"}


id: PBO:0077034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 2","termid":"PBO:0077034"}


id: PBO:0054762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2174","termid":"PBO:0054762"}


id: GO:0032028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"myosin head/neck binding","termid":"GO:0032028"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: PBO:0026759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026759"}


id: MOD:00050
data:
  {"annotated_genes":["SJAG_02522","SJAG_00733"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80835,81114],"is_not":false,"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-acetyl-L-alanine.","definition_xrefs":["PubMed:363452","PubMed:4700463","RESID:AA0041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-alanine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-(acetamido)propanoic acid","type":"exact"},{"name":"2-(acetylamino)propanoic acid","type":"exact"},{"name":"2-(acetylazanyl)propanoic acid","type":"exact"},{"name":"AcAla","type":"exact"},{"name":"MOD_RES N-acetylalanine","type":"exact"},{"name":"N-acetyl-L-alanine","type":"exact"},{"name":"N-acetylated L-alanine","type":"exact"},{"name":"acetylalanine","type":"exact"}],"termid":"MOD:00050","terms_by_termid":{"MOD:00050":null}}


id: MONDO:0011394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete keratosis pilaris atrophicans (obsolete MONDO:0011394)","termid":"MONDO:0011394","xrefs":{"Monarch":{"xref_id":"0011394"}}}


id: GO:0097692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one methyl group to lysine at position 4 of the histone.","definition_xrefs":["GOC:jh2","PMID:26320581"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 monomethylation (obsolete GO:0097692)","termid":"GO:0097692"}


id: GO:0006625
data:
  {"annotated_genes":["SJAG_00326","SJAG_03781","SJAG_00891","SJAG_04763","SJAG_02693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90785,90793,95790,97313,103459],"is_not":false,"summary":null,"term":"GO:0006625"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the peroxisome, usually using signals contained within the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to peroxisome","termid":"GO:0072663"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00891":null,"SJAG_02693":null,"SJAG_03781":null,"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0051179","GO:0006605","GO:0008150","GO:0007031"],"is_obsolete":false,"name":"protein targeting to peroxisome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein-peroxisome targeting","type":"exact"}],"termid":"GO:0006625","terms_by_termid":{"GO:0006625":null}}


id: PBO:0078323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA aspartic acid methyltransferase 1","termid":"PBO:0078323"}


id: PBO:0056037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 2","termid":"PBO:0056037"}


id: PBO:0053049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 7, transcriptional regulator","termid":"PBO:0053049"}


id: PBO:0084066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, involved in ER to Golgi transport; substrate of Ubp3/Bre5 complex; ubiquitylated by Ub-ligase Rsp5p; proteasome-mediated degradation of Sec23p is regulated by Cdc48p","termid":"PBO:0084066"}


id: GO:0102207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: docosanoate + O2 + reduced [NADPH--hemoprotein reductase] = 22-hydroxydocosanoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:40079","GOC:pz","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete docosanoate omega-hydroxylase activity (obsolete GO:0102207)","synonyms":[{"name":"behenate omega-hydroxylase activity","type":"exact"}],"termid":"GO:0102207"}


id: PBO:0066272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member F","termid":"PBO:0066272"}


id: PBO:0087225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second largest subunit of DNA polymerase II (DNA polymerase epsilon); required for maintenance of fidelity of chromosomal replication; essential motif in C-terminus is required for formation of the four-subunit Pol epsilon; expression peaks at the G1/S phase boundary; Cdc28p substrate","termid":"PBO:0087225"}


id: PBO:0062771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Y member 1 pseudogene","termid":"PBO:0062771"}


id: PBO:0017736
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae LYS2","termid":"PBO:0017736"}


id: PBO:0052841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-1","termid":"PBO:0052841"}


id: PBO:0082280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anti-silencing protein; causes derepression of silent loci when overexpressed","termid":"PBO:0082280"}


id: GO:0002707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"negatively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte mediated immunity","synonyms":[{"name":"down regulation of lymphocyte mediated immunity","type":"exact"},{"name":"down-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"downregulation of lymphocyte mediated immunity","type":"exact"},{"name":"inhibition of lymphocyte mediated immunity","type":"narrow"}],"termid":"GO:0002707"}


id: MONDO:0018763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"tubulinopathy","termid":"MONDO:0100153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"tubulinopathy-associated dysgyria","secondary_identifiers":["Orphanet:467166","MEDGEN:1800273","GARD:21944","UMLS:C5568850"],"synonyms":[{"name":"brain stem asymmetry-superior cerebellar and basal ganglia dysplasia syndrome","type":"exact"}],"termid":"MONDO:0018763","xrefs":{"Monarch":{"xref_id":"0018763"}}}


id: PBO:0065083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis associated non-protein coding RNA induced by stress","termid":"PBO:0065083"}


id: GO:0008431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin E binding","synonyms":[{"name":"alpha-tocopherol binding","type":"narrow"},{"name":"tocopherol binding","type":"exact"}],"termid":"GO:0008431"}


id: MONDO:0006867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neovascular glaucoma (obsolete MONDO:0006867)","termid":"MONDO:0006867","xrefs":{"Monarch":{"xref_id":"0006867"}}}


id: GO:1901653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to peptide","termid":"GO:1901652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptide","termid":"GO:1901653"}


id: MONDO:0005237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleomorphic liposarcoma (obsolete MONDO:0005237)","termid":"MONDO:0005237","xrefs":{"Monarch":{"xref_id":"0005237"}}}


id: GO:0008230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex containing the products of the insect genes Ecdysone receptor (EcR) and ultraspiracle (usp). Binding of ecdysone promotes association between the two subunits, and the receptor complex then initiates molting and metamorphosis by binding DNA and regulating the transcription of target genes.","definition_xrefs":["GOC:bf","PMID:14592980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"ecdysone receptor holocomplex","termid":"GO:0008230"}


id: PR:Q10494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C26F1.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.07","synonyms":[{"name":"Spom972h-SPAC26F1.07","type":"exact"}],"termid":"PR:Q10494"}


id: GO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The elongation of chondroitin sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of chondroitin sulfate.","definition_xrefs":["GOC:ai","PMID:11788602"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate proteoglycan biosynthetic process, chain elongation (obsolete GO:0050653)","synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"exact"},{"name":"chondroitin sulfate proteoglycan chain elongation","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"}],"termid":"GO:0050653"}


id: PBO:0031275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_flocculation","termid":"PBO:0031275"}


id: GO:0035663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 2 protein, a pattern recognition receptor that binds microbial pattern motifs to initiate an innate immune response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Toll-like receptor 2 binding","synonyms":[{"name":"TLR2 binding","type":"exact"}],"termid":"GO:0035663"}


id: PBO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.56","termid":"PBO:0005017"}


id: PR:O14251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs120 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs120 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.05c","synonyms":[{"name":"Spom972h-trs120","type":"exact"},{"name":"TRAPP subunit trs120 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14251"}


id: PBO:0070099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 13 pseudogene","termid":"PBO:0070099"}


id: MONDO:0013883
data:
  {"annotated_genes":["SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86529],"is_not":false,"summary":null,"term":"MONDO:0013883"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndromes with glycosylation defect in which the cause of the disease is a mutation in the DPAGT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome with tubular aggregates","termid":"MONDO:0000182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614750","DOID:0110676","UMLS:C3553645","GARD:18452","MEDGEN:766559"],"synonyms":[{"name":"CMS13","type":"exact"},{"name":"CMSTA2","type":"exact"},{"name":"DPAGT1 congenital myasthenic syndromes with glycosylation defect","type":"exact"},{"name":"congenital myasthenic syndrome 13 with tubular aggregates","type":"exact"},{"name":"congenital myasthenic syndrome type 13","type":"exact"},{"name":"congenital myasthenic syndrome with tubular aggregates 2","type":"exact"},{"name":"congenital myasthenic syndromes with glycosylation defect caused by mutation in DPAGT1","type":"exact"},{"name":"myasthenic syndrome, congenital, 13","type":"related"},{"name":"myasthenic syndrome, congenital, 13, with tubular aggregates","type":"exact"},{"name":"myasthenic syndrome, congenital, type 13","type":"exact"},{"name":"myasthenic syndrome, congenital, with tubular aggregates 2","type":"related"}],"termid":"MONDO:0013883","terms_by_termid":{"MONDO:0013883":null},"xrefs":{"Monarch":{"xref_id":"0013883"}}}


id: MONDO:0006205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extraskeletal Ewing sarcoma/peripheral primitive neuroectodermal tumor (obsolete MONDO:0006205)","termid":"MONDO:0006205","xrefs":{"Monarch":{"xref_id":"0006205"}}}


id: PBO:0091292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase Plb3","termid":"PBO:0091292"}


id: PATO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal to","synonyms":[{"name":"distal","type":"exact"}],"termid":"PATO:0001234"}


id: PBO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains","termid":"PBO:0090444"}


id: PR:O14039
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S rRNA (cytosine-C(5))-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase rcm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.06c","secondary_identifiers":["UniProtKB:O14039"],"synonyms":[{"name":"Spom972h-NSUN5","type":"exact"},{"name":"rRNA m(5)C methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14039"}


id: PBO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 15","termid":"PBO:0050198"}


id: PATO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces east.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left","termid":"PATO:0000366"}


id: PBO:0028371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GT_repeat_stability","termid":"PBO:0028371"}


id: PBO:0059788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 14","termid":"PBO:0059788"}


id: GO:0015636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of short-chain fatty acids from one side of a membrane to the other. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"short-chain fatty acid transmembrane transporter activity","secondary_identifiers":["GO:0015635"],"synonyms":[{"name":"short-chain fatty acid transporter activity","type":"related"},{"name":"short-chain fatty acid uptake transporter activity","type":"related"}],"termid":"GO:0015636"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: PBO:0059735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 9","termid":"PBO:0059735"}


id: PBO:0032772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin synthase Rib5","termid":"PBO:0032772"}


id: GO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.","definition_xrefs":["GOC:mah","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caffeine","termid":"GO:0031000"}


id: PBO:0055558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2994","termid":"PBO:0055558"}


id: PR:P10815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin cdc13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe)","termid":"PR:000036302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.03","secondary_identifiers":["UniProtKB:P10815"],"synonyms":[{"name":"SPBC582.03","type":"related"},{"name":"Spom972h-cdc13","type":"exact"}],"termid":"PR:P10815"}


id: PBO:0083955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication","termid":"PBO:0083955"}


id: PBO:0066565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid 5 homolog 1","termid":"PBO:0066565"}


id: PBO:0077903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase pseudogene 1","termid":"PBO:0077903"}


id: PBO:0039836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP5 antisense RNA 1 (head to head)","termid":"PBO:0039836"}


id: PATO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and orange hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow orange","termid":"PATO:0001944"}


id: PBO:0080399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS29 retromer complex component","termid":"PBO:0080399"}


id: MONDO:0010592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a polymorphic cutaneous disorder and highly variable anomalies affecting the eyes, teeth, skeleton and the central nervous, urinary, gastrointestinal and cardiovascular systems.","definition_xrefs":["Orphanet:2092"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"mixed dermis disorder","termid":"MONDO:0019294"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal dermal hypoplasia","secondary_identifiers":["NCIT:C84715","UMLS:C0016395","OMIM:305600","GARD:6457","MEDGEN:42055","SCTID:205573006","MESH:D005489","DOID:2120","ICD9:757.39","icd11.foundation:683166625"],"synonyms":[{"name":"DHOF","type":"related"},{"name":"FDH","type":"related"},{"name":"Fodh","type":"related"},{"name":"Goltz Gorlin syndrome","type":"related"},{"name":"Goltz syndrome","type":"exact"},{"name":"Goltz-Gorlin syndrome","type":"exact"},{"name":"focal dermal hypoplasia","type":"exact"},{"name":"focal dermal hypoplasia, X-linked dominant","type":"exact"}],"termid":"MONDO:0010592","xrefs":{"Monarch":{"xref_id":"0010592"}}}


id: PBO:0046795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F2R like trypsin receptor 1","termid":"PBO:0046795"}


id: PBO:0070348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 21","termid":"PBO:0070348"}


id: PBO:0087742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087742"}


id: GO:0005537
data:
  {"annotated_genes":["SJAG_04571","SJAG_01991","SJAG_03535","SJAG_02839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79607,111134,114155,118912],"is_not":false,"summary":null,"term":"GO:0005537"}]},"cv_name":"molecular_function","definition":"Binding to mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01991":null,"SJAG_02839":null,"SJAG_03535":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"D-mannose binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-947991"],"synonyms":[{"name":"mannose binding","type":"broad"},{"name":"mannose binding lectin","type":"related"}],"termid":"GO:0005537","terms_by_termid":{"GO:0005537":null}}


id: GO:0003153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the embryonic heart tube by sealing the edges of an epithelial fold.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"closure of embryonic heart tube","termid":"GO:0003153"}


id: PATO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000126 absolute mass (obsolete PATO:0000126)","termid":"PATO:0000126"}


id: PBO:0056144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate receptor, cation dependent","termid":"PBO:0056144"}


id: PBO:0011170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein","termid":"PBO:0011170"}


id: MONDO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung with reduced markings on its chest radiograph and increased areas of transradiancy (hyperlucency). A hyperlucent lung is usually associated with pulmonary emphysema or pneumothorax.","definition_xrefs":["MESH:D019568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlucent lung","secondary_identifiers":["UMLS:C0524799","DOID:10032","MEDGEN:101178"],"termid":"MONDO:0000925","xrefs":{"Monarch":{"xref_id":"0000925"}}}


id: GO:0035225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of embryonic cells to the genital imaginal disc founder populations. Early in development at the blastoderm stage, the anlage of the genital disc of both sexes consists of three primordia: the female genital primoridum lcoated anteriorly, the anal primoridum located posteriorly, and the male gential primordium between the two.","definition_xrefs":["PMID:11494318","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of imaginal disc primordium","termid":"GO:0007445"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of genital disc primordium","termid":"GO:0035225"}


id: MONDO:0044970
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id: FYPO:0004655
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id: MOD:01247
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id: GO:1900210
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id: MONDO:0006313
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id: MONDO:0005461
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id: PR:Q7LKV3
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id: GO:1990114
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id: GO:0008341
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id: MOD:01453
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-glutamate 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated glutamic acid","termid":"MOD:00713"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"5-methyl esterified L-glutamic acid","type":"exact"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"O-methyl Glutamyl","type":"exact"},{"name":"O5MeGlu","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"}],"termid":"MOD:01453"}


id: FYPO:0005727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint occurs more slowly than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:19592249","PomBase:mah","PomBase:vw","PMID:21664573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"decreased rate of deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"delayed inactivation of the SAC","type":"broad"},{"name":"delayed inactivation of the mitotic SAC","type":"exact"},{"name":"delayed inactivation of the mitotic spindle assembly checkpoint","type":"exact"},{"name":"reduced rate of deactivation of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0005727"}


id: MONDO:0017599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Splenic diffuse red pulp small B-cell lymphoma is a rare, indolent B-cell non-Hodgkin lymphoma characterized by abnormal proliferation of small, monomorphous, basophilic B-lymphocytes, with villous cytoplasm, in the splenic red pulp, bone marrow and peripheral blood. It typically presents in the late clinical stages with splenomegaly and moderate lymphocytosis. Cytopenias are rare and likely associated with hypersplenism.","definition_xrefs":["Orphanet:300869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"marginal zone lymphoma","termid":"MONDO:0017604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic diffuse red pulp small B-cell lymphoma","secondary_identifiers":["NCIT:C80309","MEDGEN:397437","SCTID:763884007","ONCOTREE:SDRPL","GARD:21248","ICDO:9591/3","icd11.foundation:1970934986","UMLS:C2699508"],"synonyms":[{"name":"SDRPL","type":"exact"},{"name":"splenic diffuse red pulp lymphoma","type":"exact"}],"termid":"MONDO:0017599","xrefs":{"Monarch":{"xref_id":"0017599"}}}


id: PBO:0083804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that binds ribosomal protein L11; required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis; localizes to the nucleolus and in foci along nuclear periphery; cooperates with Ebp2p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering; mouse homolog shows altered expression in Huntington's disease model mice","termid":"PBO:0083804"}


id: MONDO:0006935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the right ventricular outflow tract that originates within the body of the right ventricle, that exists at the time of birth; it often occurs in association with other intracardiac anomalies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve stenosis","termid":"MONDO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary subvalvular stenosis","secondary_identifiers":["ICD9:746.83","NANDO:2100092","MEDGEN:11030","NCIT:C34961","MESH:D011662","SCTID:204370002","NANDO:2200276","UMLS:C0034084","EFO:1001137","DOID:8861"],"synonyms":[{"name":"congenital infundibular stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis, congenital","type":"exact"},{"name":"pulmonary infundibular stenosis","type":"exact"},{"name":"subvalvular pulmonic stenosis","type":"exact"}],"termid":"MONDO:0006935","xrefs":{"Monarch":{"xref_id":"0006935"}}}


id: GO:0005245
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:tb","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic cation channel activity","termid":"GO:0022843"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9701055","GO:0010173","Reactome:R-HSA-5577213","GO:0015270","Reactome:R-HSA-265645","Reactome:R-HSA-9701141"],"synonyms":[{"name":"depolarization-activated calcium channel","type":"broad"},{"name":"depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"voltage gated calcium channel activity","type":"exact"},{"name":"voltage-dependent calcium channel activity","type":"exact"},{"name":"voltage-gated calcium ion channel activity","type":"exact"},{"name":"voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:0005245","terms_by_termid":{"GO:0008331":null}}


id: PBO:0063271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 17 pseudogene","termid":"PBO:0063271"}


id: MONDO:1010484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, horse","secondary_identifiers":["OMIA:000994-9796"],"termid":"MONDO:1010484","xrefs":{"Monarch":{"xref_id":"1010484"}}}


id: GO:1902134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-secoisolariciresinol.","definition_xrefs":["PMID:15949826","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"(+)-secoisolariciresinol metabolic process","termid":"GO:1902133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(+)-secoisolariciresinol catabolic process","synonyms":[{"name":"(+)-secoisolariciresinol breakdown","type":"exact"},{"name":"(+)-secoisolariciresinol catabolism","type":"exact"},{"name":"(+)-secoisolariciresinol degradation","type":"exact"}],"termid":"GO:1902134"}


id: MONDO:0006804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An advanced, invasive breast adenocarcinoma characterized by the presence of distinct changes in the overlying skin. These changes include diffuse erythema, edema, peau d'orange (skin of an orange) appearance, tenderness, induration, warmth, enlargement, and in some cases a palpable mass. The skin changes are the consequence of lymphatic obstruction from the underlying invasive breast adenocarcinoma. Microscopically, the dermal lymphatics show prominent infiltration by malignant cells. The invasive breast adenocarcinoma is usually of ductal, NOS type. There is not significant inflammatory cell infiltrate present, despite the name of this carcinoma.","definition_xrefs":["NCIT:C4001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"inflammatory breast carcinoma","secondary_identifiers":["EFO:1000984","MESH:D058922","ICDO:8530/3","ONCOTREE:IBC","MEDGEN:75841","DOID:6263","MedDRA:10006205","SCTID:254840009","UMLS:C0278601"],"synonyms":[{"name":"IBC","type":"related"},{"name":"breast cancer, inflammatory","type":"related"},{"name":"inflammatory breast cancer","type":"exact"},{"name":"inflammatory breast carcinoma","type":"exact"},{"name":"inflammatory carcinoma of breast","type":"exact"},{"name":"inflammatory carcinoma of the breast","type":"exact"},{"name":"mastitis Carcinomatosa","type":"exact"},{"name":"mastitis carcinomatosa","type":"exact"}],"termid":"MONDO:0006804","xrefs":{"Monarch":{"xref_id":"0006804"}}}


id: PR:O94703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04551","PANTHER:PTHR11239:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.03","secondary_identifiers":["UniProtKB:O94703"],"synonyms":[{"name":"DNA-directed RNA polymerase I 13.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZNRD1","type":"exact"}],"termid":"PR:O94703"}


id: GO:0034206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed by the association of a distinct set of general and specific transcription factors with a region of enhancer DNA. The cooperative assembly of an enhanceosome confers specificity of transcriptional regulation.","definition_xrefs":["PMID:11250145","PMID:17574024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"enhanceosome","secondary_identifiers":["Wikipedia:Enhanceosome"],"termid":"GO:0034206"}


id: PBO:0088407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi zinc importer, CDF family, Cis4","termid":"PBO:0088407"}


id: MOD:00651
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a palmitoylamino group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-palmitoylated residue","synonyms":[{"name":"N-hexadecanoylated residue","type":"exact"},{"name":"NPamRes","type":"exact"}],"termid":"MOD:00651"}


id: GO:0007110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that results in the division of the cytoplasm of a cell after meiosis I, resulting in the separation of the original cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiosis I cytokinesis","synonyms":[{"name":"cytokinesis after meiosis I","type":"exact"}],"termid":"GO:0007110"}


id: GO:1903583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basophil degranulation.","definition_xrefs":["PMID:10880837","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of basophil degranulation","termid":"GO:1903581"},{"relation_name":"positively_regulates","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of basophil degranulation","synonyms":[{"name":"activation of basophil degranulation","type":"narrow"},{"name":"up regulation of basophil degranulation","type":"exact"},{"name":"up-regulation of basophil degranulation","type":"exact"},{"name":"upregulation of basophil degranulation","type":"exact"}],"termid":"GO:1903583"}


id: PBO:0057510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 628","termid":"PBO:0057510"}


id: GO:0032344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of aldosterone metabolic process","synonyms":[{"name":"regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032344"}


id: GO:0036009
data:
  {"annotated_genes":["SJAG_00943","SJAG_00286","SJAG_03949","SJAG_02350"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73701,110584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[96842,95862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102559"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[protein] + S-adenosyl-L-methionine = N(5)-methyl-L-glutaminyl-[protein] + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:11847124","RHEA:57452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_03949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0140096","GO:0008276","GO:0016741"],"is_obsolete":false,"name":"protein-glutamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6800138"],"synonyms":[{"name":"protein glutamine N-methylase activity","type":"exact"},{"name":"protein glutamine N-methyltransferase activity","type":"exact"}],"termid":"GO:0036009","terms_by_termid":{"GO:0102559":null,"GO:1990259":null}}


id: PBO:0113233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the filamentous growth pathway; inhibits invasive growth by dampening the activity of the filamentous MAPK pathway; localizes to the cell wall and to the vacuole and cell periphery in HTP studies; deletion improves xylose fermentation in industrially engineered strains; nonessential gene","termid":"PBO:0113233"}


id: PBO:0072646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor 2","termid":"PBO:0072646"}


id: MONDO:0032853
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87216],"is_not":false,"summary":null,"term":"MONDO:0032853"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"is_obsolete":false,"name":"myopathy, distal, 6, adult-onset, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618655","MEDGEN:1684760","UMLS:C5203349"],"synonyms":[{"name":"MPD6","type":"related"},{"name":"MYOPATHY, DISTAL, 6, ADULT-ONSET, AUTOSOMAL DOMINANT","type":"related"},{"name":"myopathy, distal, 6, adult onset","type":"exact"}],"termid":"MONDO:0032853","terms_by_termid":{"MONDO:0032853":null},"xrefs":{"Monarch":{"xref_id":"0032853"}}}


id: GO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+.","definition_xrefs":["PMID:15761036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","secondary_identifiers":["Wikipedia:11beta-hydroxysteroid_dehydrogenase","Reactome:R-HSA-194023"],"synonyms":[{"name":"11beta-hydroxy steroid dehydrogenase","type":"related"},{"name":"11beta-hydroxysteroid dehydrogenase","type":"related"},{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-reductase","type":"related"},{"name":"corticosteroid 11beta-dehydrogenase","type":"related"}],"termid":"GO:0003845"}


id: GO:0098683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribbon synpase of an auditory hair cell of the cochlear. These ribbon synapses contain spherical synaptic ribbons and lack and arciform density.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribbon synapse","termid":"GO:0097470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cochlear hair cell ribbon synapse","termid":"GO:0098683"}


id: GO:0006573
data:
  {"annotated_genes":["SJAG_04098","SJAG_06635","SJAG_00396","SJAG_04149","SJAG_00944","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76470,77361,58710,64082,80305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[73463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_00944":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"valine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"valine metabolism","type":"exact"}],"termid":"GO:0006573","terms_by_termid":{"GO:0006574":null,"GO:0009099":null}}


id: GO:0006013
data:
  {"annotated_genes":["SJAG_02783","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76512,79511],"is_not":false,"summary":null,"term":"GO:0006013"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02783":null,"SJAG_04334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"mannose metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mannose metabolism","type":"exact"}],"termid":"GO:0006013","terms_by_termid":{"GO:0006013":null}}


id: FYPO:0003440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during cytokinesis. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PMID:24798735","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during cytokinesis","synonyms":[{"name":"cell lysis during cytokinesis during mitotic cell cycle","type":"related"},{"name":"cell lysis during cytokinesis during vegetative growth","type":"exact"},{"name":"cytolysis during cytokinesis","type":"exact"},{"name":"inviable, lysed cell during cytokinesis","type":"exact"}],"termid":"FYPO:0003440"}


id: GO:0052919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic (R)-hydroxynitrile = an aliphatic aldehyde or ketone + hydrogen cyanide.","definition_xrefs":["EC:4.1.2.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"aliphatic (R)-hydroxynitrile lyase activity","synonyms":[{"name":"(R)-HNL activity","type":"broad"},{"name":"(R)-hydroxynitrile lyase activity","type":"broad"},{"name":"(R)-oxynitrilase activity","type":"broad"}],"termid":"GO:0052919"}


id: GO:0048791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a neurotransmitter into the synaptic cleft by exocytosis of synaptic vesicles, where the release step is dependent on a rise in cytosolic calcium ion levels.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"},{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}


id: FYPO:0004714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid import RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Amino acid import RNAs are transcribed from genes whose products are involved in amino acid import into the cell or an organelle.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of amino acid import gene mRNA during vegetative growth","synonyms":[{"name":"decreased amino acid import gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of amino acid import gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of amino acid import gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of amino acid import gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of amino acid import gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004714"}


id: MONDO:0018864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kikuchi-Fujimoto disease (KFD) is a benign and self-limited disorder, characterized by regional cervical lymphadenopathy with tenderness, usually accompanied with mild fever and night sweats. Less frequent symptoms include weight loss, nausea, vomiting, sore throat.","definition_xrefs":["Orphanet:50918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Kikuchi-Fujimoto disease","secondary_identifiers":["MEDGEN:97979","MESH:D020042","NCIT:C71719","SCTID:127217009","UMLS:C0398367","GARD:6834"],"synonyms":[{"name":"Kikuchi disease","type":"exact"},{"name":"Kikuchi necrotizing lymphadenitis","type":"related"},{"name":"Kikuchi's disease","type":"related"},{"name":"Kikuchi-Fujimoto's disease","type":"related"},{"name":"histiocytic necrotising lymphadenitis","type":"related"},{"name":"histiocytic necrotizing lymphadenitis","type":"exact"},{"name":"nosocomial Kikuchi's disease","type":"related"}],"termid":"MONDO:0018864","xrefs":{"Monarch":{"xref_id":"0018864"}}}


id: MONDO:0004851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocarditis","termid":"MONDO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"toxic myocarditis","secondary_identifiers":["SCTID:31993003","UMLS:C0155691","DOID:9694","ICD9:422.93","MEDGEN:510049"],"termid":"MONDO:0004851","xrefs":{"Monarch":{"xref_id":"0004851"}}}


id: GO:0010350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of magnesium.","definition_xrefs":["PMID:17270009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnesium starvation","termid":"GO:0010350"}


id: PBO:0027148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_farnesyltranstransferase_activity","termid":"PBO:0027148"}


id: PBO:0030653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methylamine","termid":"PBO:0030653"}


id: GO:0061978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mandibular joint condyle articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20679519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporomandibular joint articular cartilage development","termid":"GO:0061976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mandibular condyle articular cartilage development","termid":"GO:0061978"}


id: PBO:0061439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group E member 1","termid":"PBO:0061439"}


id: GO:0016525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"},{"relation_name":"negatively_regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of angiogenesis","synonyms":[{"name":"down regulation of angiogenesis","type":"exact"},{"name":"down-regulation of angiogenesis","type":"exact"},{"name":"downregulation of angiogenesis","type":"exact"},{"name":"inhibition of angiogenesis","type":"narrow"}],"termid":"GO:0016525"}


id: PBO:0071971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase C1","termid":"PBO:0071971"}


id: SO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing. This is less energetically favourable than watson crick base pairing. Hoogsteen GC base pairs only have two hydrogen bonds.","definition_xrefs":["PMID:12177293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hoogsteen_base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Hoogsteen_base_pair"],"synonyms":[{"name":"Hoogsteen base pair","type":"exact"}],"termid":"SO:0000500"}


id: GO:0036406
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of gene products and protein complexes that are tethered to the periplasmic side of membrane by only a covalently attached anchor, embedded in the periplasmic side of the membrane only.","definition_xrefs":["GOC:md","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of periplasmic side of cell outer membrane (obsolete GO:0036406)","synonyms":[{"name":"anchored to internal side of cell outer membrane","type":"exact"},{"name":"anchored to periplasmic side of cell outer membrane","type":"narrow"}],"termid":"GO:0036406"}


id: PBO:0048746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1","termid":"PBO:0048746"}


id: FYPO:0006672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating cells undergo transient cell fusion (cytogamy), and then one or both cells undergo haploid meiosis and sporulation. In transient cytogamy, cells fuse for a much shorter time than normal during mating, separate with incomplete exchange of cytosol contents, and the conjugation pore then reseals.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"},{"relation_name":"has_part","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000301"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"transient cell fusion during mating followed by meiotic cell cycle entry and sporulation","synonyms":[{"name":"transient cell fusion during mating followed by meiotic cell cycle entry and sporulation in haploid","type":"exact"},{"name":"transient cytogamy followed by meiotic cell cycle entry and sporulation in haploid","type":"exact"}],"termid":"FYPO:0006672"}


id: MONDO:0958297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma with BCOR genetic alterations that occurs during childhood.","definition_xrefs":["DOID:0081405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma with BCOR genetic alterations","termid":"MONDO:0958159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood sarcoma with BCOR genetic alterations","secondary_identifiers":["UMLS:C5708183","MEDGEN:1817088"],"termid":"MONDO:0958297","xrefs":{"Monarch":{"xref_id":"0958297"}}}


id: PR:Q12126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division protein kinase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03624","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase crk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.07","secondary_identifiers":["UniProtKB:Q12126"],"synonyms":[{"name":"Spom972h-CDK7","type":"exact"},{"name":"mitotic catastrophe suppressor 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12126"}


id: PBO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pho88 family protein (predicted)","termid":"PBO:0001882"}


id: MONDO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Meningitis that arises from sarcoidosis.","definition_xrefs":["Wikipedia:Neurosarcoidosis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"name":"obsolete sarcoid meningitis (obsolete MONDO:0001424)","secondary_identifiers":["DOID:12055","SCTID:192673008","ICD10CM:D86.81","ICD9:321.4"],"synonyms":[{"name":"meningitis in sarcoidosis","type":"exact"}],"termid":"MONDO:0001424","xrefs":{"Monarch":{"xref_id":"0001424"}}}


id: FYPO:0004763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome does not occur during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during meiosis I","synonyms":[{"name":"abolished protein localisation to kinetochore during meiosis I","type":"exact"},{"name":"abolished protein localization to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to meiotic kinetochore during meiosis I","type":"exact"},{"name":"protein localization to kinetochore during meiosis I abolished","type":"exact"}],"termid":"FYPO:0004763"}


id: PBO:0060579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 15","termid":"PBO:0060579"}


id: PBO:0036338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal-dependent protein hydrolase family protein, human C12orf10 ortholog","termid":"PBO:0036338"}


id: PR:O74856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- caf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) ribonuclease pop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.06c","synonyms":[{"name":"CCR4-associated factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-caf1","type":"exact"}],"termid":"PR:O74856"}


id: GO:0102334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-undecaprenyl phosphate + UDP-N,N'-diacetylbacillosamine = N,N'-diacetyl-alpha-D-bacillosaminyl-diphospho-tri-trans,hepta-cis-undecaprenol + UMP.","definition_xrefs":["EC:2.7.8.36","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"N,N'-diacetylbacilliosaminyl-1-phosphate transferase activity","secondary_identifiers":["RHEA:34515","MetaCyc:RXN-13269"],"termid":"GO:0102334"}


id: PATO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000456 abstract (obsolete PATO:0000456)","termid":"PATO:0000456"}


id: PBO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; mRNA identified as translated by ribosome profiling data; overlaps the verified gene DIA1/YMR316W","termid":"PBO:0086012"}


