# terms

id: FYPO:0000768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valinomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to valinomycin","synonyms":[{"name":"resistance to valinomycin during mitotic cell cycle","type":"related"},{"name":"resistance to valinomycin during vegetative growth","type":"exact"},{"name":"resistant to valinomycin","type":"exact"}],"termid":"FYPO:0000768"}


id: PR:O59713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthamide biosynthesis protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03685","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.05","secondary_identifiers":["UniProtKB:O59713"],"synonyms":[{"name":"Spom972h-DPH1","type":"exact"}],"termid":"PR:O59713"}


id: MONDO:0005487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder in which the individual suffers from both symptoms that qualify as schizophrenia and symptoms that qualify as a mood disorder (e.g., depression or bipolar disorder) for a substantial portion (but not all) of the active period of the illness; for the remainder of the active period of the illness, the individual suffers from delusions or hallucinations in the absence of prominent mood symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizoaffective disorder","secondary_identifiers":["MEDGEN:11334","DOID:5418","UMLS:C0036337","icd11.foundation:106339515","ICD9:295.7","NCIT:C94378","EFO:0005411"],"termid":"MONDO:0005487","xrefs":{"Monarch":{"xref_id":"0005487"}}}


id: PBO:0031363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_brefeldin_A","termid":"PBO:0031363"}


id: GO:0033721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + NADP+ + H2O = an acid + NADPH + H+.","definition_xrefs":["RHEA:11888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.4","MetaCyc:ALDEHYDE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"NADP-acetaldehyde dehydrogenase activity","type":"related"},{"name":"NADP-dependent aldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0033721"}


id: PBO:0056883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 3","termid":"PBO:0056883"}


id: FYPO:0002658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular trehalose 6-phosphate level","synonyms":[{"name":"increased cellular trehalose 6-phosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular trehalose 6-phosphate level during vegetative growth","type":"exact"},{"name":"increased cellular trehalose-6P level","type":"exact"},{"name":"increased trehalose 6-phosphate accumulation","type":"related"}],"termid":"FYPO:0002658"}


id: GO:0034717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin6, Gemin7, and unrip (STRAP), and can bind to snRNAs; may play a role in snRNP assembly.","definition_xrefs":["PMID:17640873","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Gemin6-Gemin7-unrip complex","termid":"GO:0034717"}


id: PBO:0058904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12122","termid":"PBO:0058904"}


id: MONDO:0020653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the vagina. Morphologic variants include the clear cell, endometrioid, mesonephric, and mucinous adenocarcinoma.","definition_xrefs":["NCIT:C7981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"vaginal carcinoma","termid":"MONDO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal adenocarcinoma","secondary_identifiers":["ONCOTREE:VA","UMLS:C0279668","MEDGEN:124643"],"synonyms":[{"name":"adenocarcinoma of the vagina","type":"exact"},{"name":"adenocarcinoma of vagina","type":"exact"},{"name":"vagina adenocarcinoma","type":"exact"},{"name":"vaginal adenocarcinoma","type":"exact"}],"termid":"MONDO:0020653","xrefs":{"Monarch":{"xref_id":"0020653"}}}


id: PBO:0051234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-33-1 (pseudogene)","termid":"PBO:0051234"}


id: PBO:0081714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 639","termid":"PBO:0081714"}


id: GO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Wnt-protein, a secreted growth factor involved in signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Wnt-protein binding","termid":"GO:0017147"}


id: PBO:0055310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2737","termid":"PBO:0055310"}


id: PBO:0049310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase pi 1 pseudogene 1","termid":"PBO:0049310"}


id: GO:0015939
data:
  {"annotated_genes":["SJAG_01139","SJAG_03679","SJAG_05200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[77862,72765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01139":null,"SJAG_03679":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pantothenate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199220","GO:0006770"],"synonyms":[{"name":"pantothenate metabolism","type":"exact"},{"name":"vitamin B5 metabolic process","type":"exact"},{"name":"vitamin B5 metabolism","type":"exact"}],"termid":"GO:0015939","terms_by_termid":{"GO:0015940":null,"GO:1990181":null}}


id: PBO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 3","termid":"PBO:0042590"}


id: GO:0035100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 20-hydroxyecdysone (ecdysone). Ecdysone is an ecdysteroid produced by the prothoracic glands of immature insects and the ovaries of adult females, which stimulates growth and molting.","definition_xrefs":["ISBN:0198506732","GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol binding","termid":"GO:0032934"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ecdysone binding","termid":"GO:0035100"}


id: MONDO:0001149
data:
  {"annotated_genes":["SJAG_00773","SJAG_01756","SJAG_00835","SJAG_00856","SJAG_04745","SJAG_03617","SJAG_02246","SJAG_03891","SJAG_04699","SJAG_04070","SJAG_02737","SJAG_04259","SJAG_02680","SJAG_01082","SJAG_01293","SJAG_05245","SJAG_00768","SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[87610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008872"},{"annotations":[85886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"},{"annotations":[85443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054716"},{"annotations":[86353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054761"},{"annotations":[86377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054804"},{"annotations":[86378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054806"},{"annotations":[86747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032583"},{"annotations":[86715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030339"},{"annotations":[86107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031060"},{"annotations":[86066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011488"},{"annotations":[85970,85969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859342"},{"annotations":[85622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011437"},{"annotations":[87615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[85616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014592"},{"annotations":[86837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013254"}]},"cv_name":"mondo","definition":"A congenital or acquired developmental disorder in which the circumference of the head is smaller than normal for the person's age and sex.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00773":null,"SJAG_00835":null,"SJAG_00856":null,"SJAG_01082":null,"SJAG_01293":null,"SJAG_01756":null,"SJAG_02246":null,"SJAG_02680":null,"SJAG_02737":null,"SJAG_03161":null,"SJAG_03617":null,"SJAG_03891":null,"SJAG_04070":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551563","MESH:D008831","icd11.foundation:179350437","HP:0000252","ICD9:742.1","NCIT:C85874","DOID:10907","MEDGEN:1644158","SCTID:1829003"],"synonyms":[{"name":"microcephalus","type":"exact"},{"name":"microcephaly","type":"exact"},{"name":"microcephaly (disease)","type":"exact"},{"name":"microencephaly","type":"exact"}],"termid":"MONDO:0001149","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008872":null,"MONDO:0009624":null,"MONDO:0011437":null,"MONDO:0011488":null,"MONDO:0011790":null,"MONDO:0013254":null,"MONDO:0014592":null,"MONDO:0030339":null,"MONDO:0031060":null,"MONDO:0032583":null,"MONDO:0054593":null,"MONDO:0054716":null,"MONDO:0054761":null,"MONDO:0054804":null,"MONDO:0054806":null,"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0001149"}}}


id: MOD:01482
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a calcium atom or a cluster containing calcium for hydrogen atoms, or that coordinates a calcium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium containing modified residue","synonyms":[{"name":"CaRes","type":"exact"}],"termid":"MOD:01482"}


id: PBO:0086744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possibly involved in zinc homeostasis; Bdf1p-dependent transcription induced by salt stress; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086744"}


id: GO:0021924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts resulting in the expansion of a cell population in the external granule layer of the hindbrain. The external granule layer is the layer that originates from the rostral half of the rhombic lip in the first rhombomere.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in external granule layer","termid":"GO:0021924"}


id: PBO:0066669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ripply transcriptional repressor 2","termid":"PBO:0066669"}


id: PR:O94519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf30 gene.","definition_xrefs":["UniProtKB:O94519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor spf30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.02c","synonyms":[{"name":"Spom972h-spf30","type":"exact"},{"name":"survival of motor neuron-related-splicing factor 30 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94519"}


id: PBO:0042917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR antisense RNA 1","termid":"PBO:0042917"}


id: PBO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036139"}


id: GO:0031857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 parathyroid hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid hormone receptor binding","termid":"GO:0031856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 parathyroid hormone receptor binding","synonyms":[{"name":"type 1 parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031857"}


id: MONDO:0008417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sclerocornea","termid":"MONDO:0019629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sclerocornea, autosomal dominant","secondary_identifiers":["MEDGEN:356662","OMIM:181700","MESH:C566692","UMLS:C1866984"],"synonyms":[{"name":"sclerocornea, autosomal dominant","type":"exact"}],"termid":"MONDO:0008417","xrefs":{"Monarch":{"xref_id":"0008417"}}}


id: GO:1904917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane from lysosomal lumen to cytosol.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000078","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"},{"relation_name":"is_a","term_name":"L-arginine transmembrane export from vacuole","termid":"GO:1990818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-arginine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-arginine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904917"}


id: GO:0102970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7-deoxyloganetate = H+ + 7-deoxyloganate + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"7-deoxyloganetic acid glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9372","RHEA:39895"],"termid":"GO:0102970"}


id: GO:1903509
data:
  {"annotated_genes":["SJAG_04881","SJAG_03015","SJAG_02804","SJAG_01416","SJAG_03066","SJAG_02488","SJAG_01860","SJAG_04975","SJAG_04878","SJAG_00068","SJAG_03506","SJAG_01227","SJAG_04119","SJAG_03115","SJAG_05278","SJAG_00846","SJAG_04165","SJAG_04913","SJAG_04337","SJAG_02523","SJAG_02168","SJAG_02913","SJAG_01570","SJAG_05311","SJAG_03953","SJAG_02776","SJAG_03672","SJAG_03878","SJAG_05327","SJAG_06425","SJAG_00295","SJAG_00831","SJAG_06383","SJAG_03801","SJAG_00506","SJAG_04924","SJAG_03292"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73517,72213,104074,70238,77526,63789,78024,62740,75934,76832,89910,87787,73110,93356,78263,57895,58367,77847,58357,75905,77855,104136,75339,78598,58253,60813,63395,73890,78237,76816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[74126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[92165,79723,95616,97861,112927,75884,95507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving liposaccharide.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:9452964","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"liposaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"liposaccharide metabolism","type":"exact"}],"termid":"GO:1903509","terms_by_termid":{"GO:0006506":null,"GO:0006676":null,"GO:0051999":null}}


id: PBO:0080875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yippee like 1","termid":"PBO:0080875"}


id: GO:0008996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of single-stranded RNA that is monophosphorylated at its 5'-end; cleavage occurs predominantly at positions 5 and 6 nucleotides from the 5'-end and in A + U-rich regions, and is blocked by the presence of a 5'-triphosphate group.","definition_xrefs":["PMID:16854990","PMID:10722715"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonuclease G activity (obsolete GO:0008996)","termid":"GO:0008996"}


id: PBO:0063470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit beta","termid":"PBO:0063470"}


id: FYPO:0000837
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119697],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in any part of interphase. Includes normal and abnormal occurrences of arrest.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest in mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest in interphase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic interphase during vegetative growth","type":"exact"},{"name":"interphase block","type":"related"},{"name":"mitotic cell cycle arrest in interphase","type":"exact"},{"name":"mitotic interphase cell cycle arrest","type":"exact"}],"termid":"FYPO:0000837","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0032579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fibrous network that is part of the hyalin layer extracellular matrix. The apical lamina is thought to be principally composed of the glycoproteins fibropellins. This matrix has been found in echinoderms.","definition_xrefs":["GOC:ecd","PMID:7608987","PMID:9638331","PMID:2060714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"hyaline layer","termid":"GO:0033166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical lamina of hyaline layer","termid":"GO:0032579"}


id: PBO:0063425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D","termid":"PBO:0063425"}


id: GO:0051224
data:
  {"annotated_genes":["SJAG_03970","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[106186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01311":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein transport","type":"exact"},{"name":"down-regulation of protein transport","type":"exact"},{"name":"downregulation of protein transport","type":"exact"},{"name":"inhibition of protein transport","type":"narrow"}],"termid":"GO:0051224","terms_by_termid":{"GO:0042308":null,"GO:0042997":null}}


id: PBO:0075935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20-MTHFS readthrough","termid":"PBO:0075935"}


id: PR:000005216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the human CDC5L gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 5-like protein","synonyms":[{"name":"CDC5L","type":"exact"},{"name":"KIAA0432","type":"related"},{"name":"PCDC5RP","type":"related"},{"name":"cdc5-like protein","type":"exact"},{"name":"pombe cdc5-related protein","type":"exact"}],"termid":"PR:000005216"}


id: MONDO:0007701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial heart block","termid":"MONDO:0019490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block type II","secondary_identifiers":["DOID:0111075","ICD9:426.6","OMIM:140400","MEDGEN:333884","MESH:C564202","SCTID:698251009","GARD:4879","UMLS:C1841658"],"synonyms":[{"name":"PFHB2","type":"exact"},{"name":"PFHBII","type":"related"},{"name":"heart block progressive familial type 2","type":"related"},{"name":"progressive familial heart block type 2","type":"related"},{"name":"progressive familial heart block, type II","type":"related"}],"termid":"MONDO:0007701","xrefs":{"Monarch":{"xref_id":"0007701"}}}


id: GO:0030830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP catabolic process (obsolete GO:0030830)","synonyms":[{"name":"down regulation of cGMP catabolic process","type":"exact"},{"name":"down-regulation of cGMP catabolic process","type":"exact"},{"name":"downregulation of cGMP catabolic process","type":"exact"},{"name":"inhibition of cGMP catabolic process","type":"narrow"},{"name":"negative regulation of cGMP breakdown","type":"exact"},{"name":"negative regulation of cGMP catabolism","type":"exact"},{"name":"negative regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030830"}


id: MONDO:0042908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schaap-Taylor-Baraitser syndrome (obsolete MONDO:0042908)","termid":"MONDO:0042908","xrefs":{"Monarch":{"xref_id":"0042908"}}}


id: PBO:0055328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2756","termid":"PBO:0055328"}


id: GO:1905431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a microcystin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GO_REF:0000065","GOC:TermGenie","PMID:26055554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"microcystin transport","termid":"GO:1905431"}


id: GO:0180050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a protein or protein complex and a mitochondrial outer membrane lipid or membrane-associated protein, in order to maintain the localization of the protein, or protein complex at a specific mitochondrial outer membrane location.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"protein-mitochondrial outer membrane tethering activity","termid":"GO:0180050"}


id: PBO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 10","termid":"PBO:0071469"}


id: GO:0071651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 5 production","termid":"GO:0071649"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 5 production","termid":"GO:0071609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"positive regulation of CCL5 production","type":"exact"},{"name":"positive regulation of RANTES production","type":"exact"},{"name":"positive regulation of Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071651"}


id: FYPO:0004678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased polyadenylated 25S rRNA level","synonyms":[{"name":"increased mature polyadenylated 25S rRNA transcript level","type":"exact"},{"name":"increased polyadenylated 25S rRNA accumulation","type":"related"},{"name":"increased polyadenylated 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased polyadenylated 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased polyadenylated 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004678"}


id: MONDO:0015586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Benign familial mesial temporal lobe epilepsy is a rare epilepsy characterized by seizures with viscerosensory or experential auras, onset in adolescence or early adulthood and good prognosis. It is defined as at least 24 months of seizure freedom with or without antiepileptic medication.","definition_xrefs":["Orphanet:163717"],"gene_count":0,"genotype_count":0,"name":"obsolete benign familial mesial temporal lobe epilepsy (obsolete MONDO:0015586)","synonyms":[{"name":"benign FMTLE","type":"exact"}],"termid":"MONDO:0015586","xrefs":{"Monarch":{"xref_id":"0015586"}}}


id: GO:0004176
data:
  {"annotated_genes":["SJAG_01179","SJAG_01816","SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64445,72770,78620],"is_not":false,"summary":null,"term":"GO:0004176"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0003824","GO:0008233"],"is_obsolete":false,"name":"ATP-dependent peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0004280","Reactome:R-HSA-9839113","Reactome:R-HSA-9839059","Reactome:R-HSA-9698929","Reactome:R-HSA-9838004","Reactome:R-HSA-9838289","Reactome:R-HSA-9839751","Reactome:R-HSA-9839146","Reactome:R-HSA-9838081","Reactome:R-HSA-9839105"],"synonyms":[{"name":"ATP-dependent proteolysis","type":"related"}],"termid":"GO:0004176","terms_by_termid":{"GO:0004176":null}}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["Unimod:354#W","PubMed:9252331","OMSSA:85","PubMed:8839040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: GO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of water from a contractile vacuole to the outside of a cell by fusion of the contractile vacuole membrane with the plasma membrane.","definition_xrefs":["GOC:mah","PMID:10369671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"contractile vacuole discharge","termid":"GO:0070177"}


id: PBO:0082303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asparagine synthetase; catalyzes the synthesis of L-asparagine from L-aspartate in the asparagine biosynthetic pathway; ASN1 has a paralog, ASN2, that arose from the whole genome duplication","termid":"PBO:0082303"}


id: GO:0004194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Preferential cleavage: hydrophobic, preferably aromatic, residues in P1 and P1' positions. Cleaves Phe1-Val2, Gln4-His5, Glu13-Ala14, Ala14-Leu15, Leu15-Tyr16, Tyr16-Leu17, Gly23-Phe24, Phe24-Phe25 and Phe25-Tyr26 bonds in the B chain of insulin.","definition_xrefs":["EC:3.4.23.1"],"gene_count":0,"genotype_count":0,"name":"obsolete pepsin A activity (obsolete GO:0004194)","synonyms":[{"name":"P I","type":"related"},{"name":"P II","type":"related"},{"name":"elixir lactate of pepsin","type":"related"},{"name":"fundus-pepsin","type":"related"},{"name":"lactated pepsin","type":"related"},{"name":"lactated pepsin elixir","type":"related"},{"name":"pepsin A activity","type":"exact"},{"name":"pepsin D","type":"related"},{"name":"pepsin R","type":"related"},{"name":"pepsin activity","type":"broad"},{"name":"pepsin fortior","type":"related"}],"termid":"GO:0004194"}


id: PBO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036035"}


id: PBO:0083129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine dehydratase (aka D-serine ammonia-lyase); converts D-serine to pyruvate and ammonia by a reaction dependent on pyridoxal 5'-phosphate and zinc; may play a role in D-serine detoxification; L-serine is not a substrate","termid":"PBO:0083129"}


id: GO:0035726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of common myeloid progenitor cells, resulting in the expansion of a cell population. A common myeloid progenitor cell is a progenitor cell committed to the myeloid lineage.","definition_xrefs":["GOC:BHF","CL:0000049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common myeloid progenitor cell proliferation","termid":"GO:0035726"}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: MONDO:1010408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in Mongolian gerbil.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, Mongolian gerbil","secondary_identifiers":["OMIA:000344-10047"],"termid":"MONDO:1010408","xrefs":{"Monarch":{"xref_id":"1010408"}}}


id: PBO:0005418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DBF type","termid":"PBO:0005418"}


id: GO:0120093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"}


id: PBO:0055422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2852","termid":"PBO:0055422"}


id: SO:0000602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short 3'-uridylated RNA that can form a duplex (except for its post-transcriptionally added oligo_U tail (SO:0000609)) with a stretch of mature edited mRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guide_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Guide_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:guide_RNA","type":"exact"},{"name":"gRNA","type":"exact"},{"name":"guide RNA","type":"exact"}],"termid":"SO:0000602"}


id: GO:1901876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion binding.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","PMID:16432188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion binding","synonyms":[{"name":"regulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901876"}


id: PBO:0052834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-4","termid":"PBO:0052834"}


id: PBO:0080396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 endosomal protein sorting factor C","termid":"PBO:0080396"}


id: GO:0010636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial fusion","termid":"GO:0010635"},{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial fusion","termid":"GO:0010636"}


id: MONDO:0013242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the BLK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004335","MONDO:0019254","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 11","secondary_identifiers":["GARD:15653","MEDGEN:461968","UMLS:C3150618","SCTID:609578001","DOID:0111109","OMIM:613375"],"synonyms":[{"name":"BLK maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY11","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in BLK","type":"exact"},{"name":"maturity-onset diabetes of the young, type 11","type":"related"}],"termid":"MONDO:0013242","xrefs":{"Monarch":{"xref_id":"0013242"}}}


id: GO:1901165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophoblast cell migration","synonyms":[{"name":"activation of trophoblast cell migration","type":"narrow"},{"name":"up regulation of trophoblast cell migration","type":"exact"},{"name":"up-regulation of trophoblast cell migration","type":"exact"},{"name":"upregulation of trophoblast cell migration","type":"exact"}],"termid":"GO:1901165"}


id: GO:0061487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which DNA-dependent DNA replication is started at a late origin of replication. A late origin of replication refers to an origin that is activated late in S phase.","definition_xrefs":["PMID:19221029","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication initiation from late origin (obsolete GO:0061487)","synonyms":[{"name":"late replication origin firing","type":"exact"}],"termid":"GO:0061487"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24587195","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: MONDO:0016467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isotretinoin embryopathy is an association of malformations caused by the teratogenic effect of isotretinoin, an oral synthetic vitamin A derivative, which is used to treat severe recalcitrant cystic acne. Exposure to isotretinoin during the first trimester of pregnancy has been associated with an increased risk of spontaneous abortions and severe birth defects including serious craniofacial (microcephaly, asymmetric crying facies, microphthalmia, developmental abnormalities of the external ear, ocular hypertelorism), cardio vascular (conotruncal heart defects, aortic arch abnormalities), and central nervous system (hydrocephalus, microcephaly, lissencephaly, Dandy-Walker malformation, cognitive deficit) anomalies and thymic aplasia. Isoretinoin is contraindicated during pregnancy.","definition_xrefs":["Orphanet:2305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"isotretinoin-like syndrome","termid":"MONDO:0009473"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotretinoin syndrome","secondary_identifiers":["GARD:18765","MESH:C535670","NORD:1140","SCTID:36871005","MEDGEN:419683","NCIT:C98929","UMLS:C2930972"],"synonyms":[{"name":"Accutane fetal effects of","type":"related"},{"name":"Accutane foetal effects of","type":"related"},{"name":"Accutane-exposed pregnancies","type":"related"},{"name":"Acutane embryopathy","type":"related"},{"name":"Fetal Retinoid Syndrome","type":"exact"},{"name":"Isotretinoin (RoAccutane) embryopathy","type":"related"},{"name":"Isotretinoin embryopathy","type":"exact"},{"name":"Isotretinoin fetal effects of","type":"related"},{"name":"Isotretinoin foetal effects of","type":"related"},{"name":"Isotretinoin teratogen syndrome","type":"related"},{"name":"Retinoids embryopathy","type":"exact"},{"name":"fetal isotretinoin syndrome","type":"exact"},{"name":"fetal retinoid syndrome","type":"exact"},{"name":"foetal isotretinoin syndrome","type":"exact"},{"name":"foetal retinoid syndrome","type":"exact"},{"name":"retinoic acid embryopathy","type":"exact"}],"termid":"MONDO:0016467","xrefs":{"Monarch":{"xref_id":"0016467"}}}


id: PBO:0031338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amiodarone","termid":"PBO:0031338"}


id: MONDO:0042602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Samson-Viljoen syndrome","secondary_identifiers":["MESH:C537231","MEDGEN:419808","UMLS:C2931449"],"synonyms":[{"name":"Samson Viljoen syndrome","type":"related"},{"name":"lateral facial cleft, cleft lip and palate, anophthalmia, microtia, clavicular agenesis and asternia","type":"related"}],"termid":"MONDO:0042602","xrefs":{"Monarch":{"xref_id":"0042602"}}}


id: GO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete general transcriptional repressor activity (obsolete GO:0016565)","synonyms":[{"name":"general transcriptional repressor activity","type":"exact"}],"termid":"GO:0016565"}


id: PBO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member E, pseudogene","termid":"PBO:0046905"}


id: GO:0097661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Ctf13 in S. cerevisiae.","definition_xrefs":["GOC:jd","PMID:14747994","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Ctf13 ubiquitin ligase complex","termid":"GO:0097661"}


id: PBO:0030733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_upon_G0_to_G1_transition","termid":"PBO:0030733"}


id: SO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe non synonymous variant that deletes bases from the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_indel","termid":"SO:0001820"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_deletion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","SO:0001652","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"ANNOVAR:nonframeshift deletion","type":"exact"},{"name":"Jannovar:inframe_deletion","type":"exact"},{"name":"VAT:deletionNFS","type":"exact"},{"name":"VEP:inframe_deletion","type":"exact"},{"name":"inframe codon loss","type":"related"},{"name":"inframe decrease in CDS length","type":"exact"},{"name":"inframe deletion","type":"related"},{"name":"inframe_codon_loss","type":"exact"},{"name":"snpEff:CODON_DELETION","type":"related"}],"termid":"SO:0001822"}


id: PBO:0086213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to cruciform DNA structures; CRP1 has a paralog, MDG1, that arose from the whole genome duplication","termid":"PBO:0086213"}


id: PBO:0053494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 472","termid":"PBO:0053494"}


id: PBO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM169A antisense RNA 1","termid":"PBO:0047127"}


id: PBO:0079044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-6","termid":"PBO:0079044"}


id: PBO:0064825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3G","termid":"PBO:0064825"}


id: PBO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1/S-specific B-type cyclin Cig2","termid":"PBO:0001694"}


id: PBO:0003940
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.6","termid":"PBO:0003940"}


id: GO:0021710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar stellate cell. Differentiation includes the processes involved in commitment of a neuroblast to a cerebellar stellate cell fate. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","PMID:15157725","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar molecular layer formation","termid":"GO:0021688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar stellate cell differentiation","termid":"GO:0021710"}


id: PBO:0048063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 12","termid":"PBO:0048063"}


id: GO:0038088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a beta-type platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"VEGF-A/PDGFRbeta signaling","type":"narrow"},{"name":"VEGF-activated PDGFRbeta signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor-beta signalling pathway","type":"exact"},{"name":"VEGF/PDGFRbeta signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor-beta signaling pathway","type":"exact"}],"termid":"GO:0038088"}


id: PBO:0089322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1","termid":"PBO:0089322"}


id: PR:Q9P7C3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01384","PANTHER:PTHR11742:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.01c","secondary_identifiers":["UniProtKB:Q9P7C3"],"synonyms":[{"name":"ER alpha-1,2-mannosidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Man(9)-alpha-mannosidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MAN1B1","type":"exact"}],"termid":"PR:Q9P7C3"}


id: MONDO:0009670
data:
  {"annotated_genes":["SJAG_03847"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86543],"is_not":false,"summary":null,"term":"MONDO:0009670"}]},"cv_name":"mondo","definition":"Lethal congenital contracture syndrome type 1 is a rare, genetic arthrogryposis syndrome characterized by total fetal akinesia (detectable since the 13th week of gestation) accompanied by hydrops, micrognathia, pulmonary hypoplasia, pterygia and multiple joint contractures (usually flexion contractures in the elbows and extension in the knees), leading invariably to death before the 32nd week of gestation. Lack of anterior horn motoneurons, severe atrophy of the ventral spinal cord and severe skeletal muscle hypoplasia are characteristic neuropathological findings, with no evidence of other organ structural anomalies.","definition_xrefs":["Orphanet:1486"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03847":null},"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715418007","MESH:C537194","OMIM:253310","MEDGEN:344338","DOID:0060559","UMLS:C1854664","GARD:3227"],"synonyms":[{"name":"GLE1 lethal congenital contracture syndrome","type":"exact"},{"name":"Herva disease","type":"exact"},{"name":"LCCS1","type":"exact"},{"name":"Lccs","type":"related"},{"name":"lethal autosomal recessive syndrome of multiple congenital contractures","type":"related"},{"name":"lethal congenital contracture syndrome 1","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in GLE1","type":"exact"},{"name":"lethal congenital contracture syndrome type 1","type":"exact"},{"name":"multiple contracture syndrome, Finnish type","type":"exact"}],"termid":"MONDO:0009670","terms_by_termid":{"MONDO:0009670":null},"xrefs":{"Monarch":{"xref_id":"0009670"}}}


id: PBO:0069169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 421, pseudogene","termid":"PBO:0069169"}


id: MONDO:0007715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic poikilocytic anemia due to reduced ankyrin binding sites","secondary_identifiers":["MESH:C564197","OMIM:141700","UMLS:C1841622","MEDGEN:330649"],"synonyms":[{"name":"hemolytic poikilocytic anemia due to reduced ankyrin binding sites","type":"exact"}],"termid":"MONDO:0007715","xrefs":{"Monarch":{"xref_id":"0007715"}}}


id: MONDO:0010462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by moderate intellectual disability, seizures, dysmorphic facial features and in some older patients slowly progressive unsteady gait and progressive weakness that has material basis in variation in the chromosomal region Xq21.33-q23.","definition_xrefs":["PMID:10398239","DOID:0060819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability Chudley-Schwartz type","secondary_identifiers":["OMIM:300861","UMLS:C3275471","MEDGEN:477102"],"synonyms":[{"name":"MRXSCS","type":"exact"},{"name":"X-linked intellectual disability with seizures, hypogammaglobinemia, and gait disturbance","type":"exact"},{"name":"X-linked mental retardation with seizures, hypogammaglobinemia, and gait disturbance","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Chudley-Schwartz type","type":"exact"},{"name":"intellectual disability, X-linked, with seizures, hypogammaglobulinemia, and Gait disturbance","type":"related"},{"name":"mental retardation, X-linked, syndromic, Chudley-Schwartz type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Chudley-Schwartz type, X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, with seizures, hypogammaglobulinemia, and Gait disturbance","type":"related"}],"termid":"MONDO:0010462","xrefs":{"Monarch":{"xref_id":"0010462"}}}


id: PBO:0028522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zearalenone","termid":"PBO:0028522"}


id: PBO:0067089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 125, pseudogene","termid":"PBO:0067089"}


id: PBO:0080159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked","termid":"PBO:0080159"}


id: PBO:0085617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; involved in coordination between the initiation of recombination and the first division of meiosis; part of a complex (Rec107p-Mei4p-Rec114p) required for ds break formation","termid":"PBO:0085617"}


id: PBO:0081739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 670","termid":"PBO:0081739"}


id: PR:O13868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.02c","synonyms":[{"name":"Spom972h-SPAC1B3.02c","type":"exact"}],"termid":"PR:O13868"}


id: GO:0120142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any ecdysone receptor signaling pathway.","definition_xrefs":["PMID:23072462","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor signaling pathway","termid":"GO:0120141"},{"relation_name":"positively_regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"positive regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120142"}


id: GO:0061052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle hypertrophy","termid":"GO:0010614"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle tissue growth","termid":"GO:0055022"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"negatively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061052"}


id: GO:0048488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process, in which the synaptic vesicle membrane constituents are retrieved from the presynaptic membrane on the axon terminal after neurotransmitter secretion by exocytosis. Synaptic vesicle endocytosis can occur via clathrin-dependent and clathrin-independent mechanisms.","definition_xrefs":["PMID:26430111","PMID:20448150","GOC:aruk","GOC:jid","GOC:lmg","GOC:mah","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic endocytosis","termid":"GO:0140238"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle endocytosis","secondary_identifiers":["GO:0008099"],"synonyms":[{"name":"synaptic vesicle retrieval","type":"related"}],"termid":"GO:0048488"}


id: PATO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality inhering in a bearer by virtue of the bearer's lacking focus.","definition_xrefs":["PATOC:NC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focus","termid":"PATO:0001516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blurry","termid":"PATO:0001518"}


id: GO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-glutamyltransferase activity (obsolete GO:0003840)","termid":"GO:0003840"}


id: PBO:0086922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyridoxal-5'-phosphate synthase; involved in thiamine and pyridoxine biosynthesis; member of a stationary phase-induced gene family where transcriptional induction precedes the diauxic shift; induced in the absence of thiamine in a Thi2/3p-dependent manner and repressed in its presence; forms a co-regulated gene pair with SNO3; paralog of SNZ1 and SNZ2","termid":"PBO:0086922"}


id: FYPO:0002183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and cells with normal morphology (i.e. size, shape, and structure). The cells with normal morphology arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and cells with normal morphology (obsolete FYPO:0002183)","termid":"FYPO:0002183"}


id: GO:0080117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of secondary vascular tissues by the vascular cambium.","definition_xrefs":["PMID:19074290","ISBN:0471245208","PO:0025004","PO:0005598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral growth","termid":"GO:0080190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary growth","synonyms":[{"name":"cambial secondary growth","type":"exact"}],"termid":"GO:0080117"}


id: PBO:0083455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene GIM5/YML094W; deletion confers sensitivity to GSAO","termid":"PBO:0083455"}


id: PBO:0066441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 2","termid":"PBO:0066441"}


id: FYPO:0001039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thiamine diphosphokinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal thiamine diphosphokinase activity","termid":"FYPO:0001039"}


id: MONDO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, EBV-positive cutaneous T-cell lymphoproliferative disorder, composed of CD8 positive cytotoxic T-lymphocytes. It affects children, almost exclusively in Latin America and Asia. Patients present with papulovesicular skin lesions, clinically resembling hydroa vacciniforme, in areas of sun-exposed skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"},{"relation_name":"is_a","term_name":"EBV-positive T-cell lymphoproliferative disorder of childhood","termid":"MONDO:0006188"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hydroa vacciniforme-like lymphoma","secondary_identifiers":["UMLS:C1708397","ICDO:9725/3","NCIT:C45327","GARD:21563","MEDGEN:317758","Orphanet:364039","SCTID:763719001"],"synonyms":[{"name":"HVLL","type":"exact"},{"name":"angiocentric cutaneous T-cell lymphoma of childhood","type":"exact"},{"name":"hV-like lymphoma","type":"exact"},{"name":"hydroa vacciniforme-like cutaneous T-cell lymphoma","type":"exact"},{"name":"hydroa vacciniforme-like lymphoma","type":"exact"},{"name":"hydroa vacciniforme-like lymphoproliferative disorder","type":"exact"},{"name":"hydroa-like cutaneous T-cell lymphoma","type":"exact"}],"termid":"MONDO:0018224","xrefs":{"Monarch":{"xref_id":"0018224"}}}


id: GO:1902083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["PMID:19198614","GOC:TermGenie","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"},{"relation_name":"negatively_regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-cysteine S-nitrosylation","synonyms":[{"name":"down regulation of S-nitrosylation","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down regulation of protein S-nitrosylation","type":"exact"},{"name":"down-regulation of S-nitrosylation","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down-regulation of protein S-nitrosylation","type":"exact"},{"name":"downregulation of S-nitrosylation","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"downregulation of protein S-nitrosylation","type":"exact"},{"name":"inhibition of S-nitrosylation","type":"exact"},{"name":"inhibition of peptidyl-cysteine S-nitrosylation","type":"narrow"},{"name":"inhibition of protein S-nitrosylation","type":"exact"},{"name":"negative regulation of S-nitrosylation","type":"exact"},{"name":"negative regulation of protein S-nitrosylation","type":"exact"}],"termid":"GO:1902083"}


id: MONDO:0006604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic erythematous skin disorder that affects the face. It is characterized by the development of redness in the cheeks, nose, and/or forehead and telangiectasia. Sometimes, the erythematous changes may involve the eyelids.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"rosacea","secondary_identifiers":["ICD9:695.3","UMLS:C0035854","Wikipedia:Rosacea","EFO:1000760","NCIT:C97136","icd11.foundation:134161404","MESH:D012393","DOID:8881","MEDGEN:11269","ICD10CM:L71","SCTID:398909004"],"synonyms":[{"name":"acne rosacea","type":"exact"},{"name":"acne roscea","type":"exact"},{"name":"acne, erythematosa","type":"exact"}],"termid":"MONDO:0006604","xrefs":{"Monarch":{"xref_id":"0006604"}}}


id: PBO:0060304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12A pseudogene 1","termid":"PBO:0060304"}


id: GO:1902260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["PMID:11299204","GOC:TermGenie","GOC:BHF","GOC:rl","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"down regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"down-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"downregulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"inhibition of delayed rectifier potassium channel activity","type":"narrow"}],"termid":"GO:1902260"}


id: PBO:0030517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_brefeldin_A","termid":"PBO:0030517"}


id: PBO:0060668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1 pseudogene 1","termid":"PBO:0060668"}


id: GO:0010529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transposition. Transposition results in the movement of discrete segments of DNA between nonhomologous sites.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposition (obsolete GO:0010529)","termid":"GO:0010529"}


id: PBO:0062208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AC member 4 pseudogene","termid":"PBO:0062208"}


id: MONDO:0010509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the FRMPD4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 104","secondary_identifiers":["OMIM:300983","DOID:0112018","MEDGEN:934784","UMLS:C4310817","GARD:22696"],"synonyms":[{"name":"FRMPD4 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX104","type":"exact"},{"name":"intellectual developmental disorder, X-linked 104","type":"exact"},{"name":"intellectual disability, X-linked 104","type":"exact"},{"name":"intellectual disability, X-linked type 104","type":"exact"},{"name":"mental retardation, X-linked 104","type":"exact"},{"name":"mental retardation, X-linked type 104","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in FRMPD4","type":"exact"}],"termid":"MONDO:0010509","xrefs":{"Monarch":{"xref_id":"0010509"}}}


id: PBO:0083911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Folylpolyglutamate synthetase; catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA; protein abundance increases in response to DNA replication stress","termid":"PBO:0083911"}


id: FYPO:0000102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cisplatin. Cells stop growing (and may die) at a concentration of cisplatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cisplatin","synonyms":[{"name":"hypersensitive to cisplatin","type":"exact"},{"name":"sensitive to DDP","type":"broad"},{"name":"sensitive to cis-DDP","type":"exact"},{"name":"sensitive to cisplatin during mitotic cell cycle","type":"related"},{"name":"sensitive to cisplatin during vegetative growth","type":"exact"}],"termid":"FYPO:0000102"}


id: GO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + licodione = 2'-O-methyllicodione + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:18521","EC:2.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"licodione 2'-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03623","MetaCyc:LICODIONE-2-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:licodione 2'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030751"}


id: PBO:0047875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(q25)","termid":"PBO:0047875"}


id: PBO:0080983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 18","termid":"PBO:0080983"}


id: PBO:0042262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5 pseudogene 1","termid":"PBO:0042262"}


id: PBO:0063557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase 1","termid":"PBO:0063557"}


id: PBO:0110061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase, implicated in iron-sulfur cluster assembly","termid":"PBO:0110061"}


id: MONDO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal edema","termid":"MONDO:0006712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"contact lens corneal edema","secondary_identifiers":["UMLS:C0474442","MEDGEN:633950","DOID:11034","ICD9:371.24","SCTID:49362009"],"termid":"MONDO:0001183","xrefs":{"Monarch":{"xref_id":"0001183"}}}


id: PBO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B12","termid":"PBO:0061334"}


id: PBO:0025544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2, Ubc11/UbcP4","termid":"PBO:0025544"}


id: PBO:0050231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 9","termid":"PBO:0050231"}


id: GO:0006539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process via 2-oxoglutarate (obsolete GO:0006539)","synonyms":[{"name":"glutamate breakdown via 2-oxoglutarate","type":"exact"},{"name":"glutamate catabolic process via 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process via alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process via alpha-oxoglutarate","type":"exact"},{"name":"glutamate catabolism via 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolism via alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolism via alpha-oxoglutarate","type":"exact"},{"name":"glutamate degradation via 2-oxoglutarate","type":"exact"}],"termid":"GO:0006539"}


id: PBO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_division_site","termid":"PBO:0030017"}


id: PBO:0088202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc accumulation in cytosol; ortholog of the mouse KE4 and member of the ZIP (ZRT, IRT-like Protein) family","termid":"PBO:0088202"}


id: MONDO:1012495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"symmetrical onychomadesis, non-human animal","termid":"MONDO:1011760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetrical onychomadesis, dog","secondary_identifiers":["OMIA:001989-9615"],"termid":"MONDO:1012495","xrefs":{"Monarch":{"xref_id":"1012495"}}}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: MONDO:0007833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iris pigment layer, cleavage of","secondary_identifiers":["MEDGEN:326664","UMLS:C1840140","OMIM:147610"],"synonyms":[{"name":"iris pigment layer, cleavage of","type":"exact"}],"termid":"MONDO:0007833","xrefs":{"Monarch":{"xref_id":"0007833"}}}


id: GO:1900645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chanoclavine-I biosynthetic process (obsolete GO:1900645)","synonyms":[{"name":"activation of chanoclavine-I anabolism","type":"exact"},{"name":"activation of chanoclavine-I biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I formation","type":"exact"},{"name":"activation of chanoclavine-I synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I formation","type":"exact"},{"name":"positive regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I formation","type":"exact"},{"name":"up regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I formation","type":"exact"},{"name":"up-regulation of chanoclavine-I synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I formation","type":"exact"},{"name":"upregulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900645"}


id: PBO:0070281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 22","termid":"PBO:0070281"}


id: GO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to endoplasmic reticulum stress.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","termid":"GO:0036492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation","synonyms":[{"name":"regulation of ER stress-induced eIF2 alpha phosphorylation","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by ER stress","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0060734"}


id: GO:0033355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cyclic series of interconversions involving L-ascorbate and glutathione that scavenges hydrogen peroxide and reduces it to water, with concomitant oxidation of NADPH.","definition_xrefs":["GOC:mah","MetaCyc:PWY-2261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0006790","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ascorbate glutathione cycle","synonyms":[{"name":"hydrogen peroxide detoxification","type":"related"}],"termid":"GO:0033355"}


id: PBO:0061271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 3","termid":"PBO:0061271"}


id: SO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A haplotype is one of a set of coexisting sequence variants of a haplotype block.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"haplotype_block","termid":"SO:0000355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haplotype","secondary_identifiers":["http://en.wikipedia.org/wiki/Haplotype"],"termid":"SO:0001024"}


id: PBO:0089350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"23S rRNA/U6 snRNA (adenine-N(6))-methyltransferase Mtl16","termid":"PBO:0089350"}


id: MONDO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The backflow of blood from the right ventricle into the right atrium, owning to imperfect functioning/insufficiency of the tricuspid valve.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve insufficiency","secondary_identifiers":["icd11.foundation:770887951","NANDO:2200301","NCIT:C50842","UMLS:C0040961","MESH:D014262","MEDGEN:11911","SCTID:111287006","DOID:4080"],"synonyms":[{"name":"insufficiency, tricuspid","type":"exact"},{"name":"tricuspid incompetence","type":"exact"},{"name":"tricuspid insufficiency","type":"exact"},{"name":"tricuspid regurgitation","type":"exact"},{"name":"tricuspid valve regurgitation","type":"exact"}],"termid":"MONDO:0002870","xrefs":{"Monarch":{"xref_id":"0002870"}}}


id: GO:0010321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vegetative phase change. Vegetative phase change is the set of post-embryonic processes involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"vegetative phase change","termid":"GO:0010050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative phase change","termid":"GO:0010321"}


id: MONDO:0009725
data:
  {"annotated_genes":["SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87083],"is_not":false,"summary":null,"term":"MONDO:0009725"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited myopathy caused by mutations in the NEB gene. It is characterized by generalized hypotonia and skeletal muscle weakness.","definition_xrefs":["NCIT:C118784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110928","MEDGEN:342534","OMIM:256030","GARD:15209","MESH:C538349","UMLS:C1850569"],"synonyms":[{"name":"NEB nemaline myopathy","type":"exact"},{"name":"NEM2","type":"exact"},{"name":"nemaline myopathy 2","type":"exact"},{"name":"nemaline myopathy 2, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in NEB","type":"exact"},{"name":"nemaline myopathy type 2","type":"exact"}],"termid":"MONDO:0009725","terms_by_termid":{"MONDO:0009725":null},"xrefs":{"Monarch":{"xref_id":"0009725"}}}


id: PBO:0062630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 7 (gene/pseudogene)","termid":"PBO:0062630"}


id: GO:0071321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cGMP (cyclic GMP, guanosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cGMP","termid":"GO:0070305"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cGMP","synonyms":[{"name":"cellular response to 3',5' cGMP","type":"exact"},{"name":"cellular response to 3',5'-cGMP","type":"exact"},{"name":"cellular response to cyclic GMP","type":"exact"},{"name":"cellular response to guanosine 3',5'-cyclophosphate","type":"exact"}],"termid":"GO:0071321"}


id: GO:0052920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2R)-2-hydroxy-2-methylbutanenitrile = butan-2-one + hydrogen cyanide.","definition_xrefs":["EC:4.1.2.46"],"gene_count":0,"genotype_count":0,"name":"obsolete (2R)-2-hydroxy-2-methylbutanenitrile lyase activity (obsolete GO:0052920)","termid":"GO:0052920"}


id: PBO:0072588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 12 homolog","termid":"PBO:0072588"}


id: GO:0060473
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory vesicle that is stored under the cell membrane of an egg. These vesicles fuse with the egg plasma membrane as part of egg activation and are part of the block to polyspermy.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cortical granule","synonyms":[{"name":"cortical vesicle","type":"related"}],"termid":"GO:0060473"}


id: GO:0060334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of type II interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-877312"],"synonyms":[{"name":"regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"regulation of immune interferon signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"regulation of type II IFN-mediated signaling pathway","type":"broad"}],"termid":"GO:0060334"}


id: FYPO:0008205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to nucleus during hypoxia","termid":"FYPO:0008205"}


id: PBO:0040255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 antisense RNA 1","termid":"PBO:0040255"}


id: GO:1905662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["PMID:22633954","GOC:nc","GO_REF:0000059","GOC:BHF","GOC:TermGenie","GOC:BHF_telomere"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomerase RNA reverse transcriptase activity (obsolete GO:1905662)","synonyms":[{"name":"down regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down regulation of telomerase, catalyst","type":"exact"},{"name":"down-regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down-regulation of telomerase, catalyst","type":"exact"},{"name":"downregulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"downregulation of telomerase, catalyst","type":"exact"},{"name":"inhibition of telomerase RNA reverse transcriptase activity","type":"narrow"},{"name":"inhibition of telomerase, catalyst","type":"narrow"},{"name":"negative regulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905662"}


id: GO:0031657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that controls the frequency, rate or extent of G1 cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031657)","synonyms":[{"name":"G1/S-specific regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031657"}


id: PBO:0053454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 404","termid":"PBO:0053454"}


id: PBO:0090562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, disaggregase Hsp104","termid":"PBO:0090562"}


id: PBO:0089574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GAP Gap1","termid":"PBO:0089574"}


id: GO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxy-2'-carboxybiphenyl + O2 = 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxy-2'-carboxybiphenyl 1,2-dioxygenase activity (obsolete GO:0034788)","termid":"GO:0034788"}


id: PBO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh2 (predicted)","termid":"PBO:0010193"}


id: PBO:0083070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus3p, and Dus4p; modifies pre-tRNA(Phe) at U17","termid":"PBO:0083070"}


id: MONDO:0012453
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85551],"is_not":false,"summary":null,"term":"MONDO:0012453"}]},"cv_name":"mondo","definition":"A rare type of hereditary spastic paraplegia usually characterized by a pure phenotype of proximal weakness of the lower extremities with spastic gait and brisk reflexes, with a bimodal age of onset of either childhood or adulthood (>30 years). In some cases, it can present as a complex phenotype with additional associated manifestations including peripheral neuropathy, bulbar palsy (with dysarthria and dysphagia), distal amyotrophy, and impaired distal vibration sense.","definition_xrefs":["Orphanet:101011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 31","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565210","SCTID:763068005","UMLS:C1853247","OMIM:610250","MEDGEN:377858","DOID:0110782","GARD:10817"],"synonyms":[{"name":"REEP1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG31","type":"exact"},{"name":"autosomal dominant spastic paraplegia 31","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 31","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in REEP1","type":"exact"},{"name":"hereditary spastic paraplegia type 31","type":"exact"},{"name":"spastic paraplegia 31","type":"related"},{"name":"spastic paraplegia 31, autosomal dominant","type":"related"}],"termid":"MONDO:0012453","terms_by_termid":{"MONDO:0012453":null},"xrefs":{"Monarch":{"xref_id":"0012453"}}}


id: PBO:0084162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved ATPase of HSP70/DnaK family; essential functional component of the EKC/KEOPS complex, with Bud32p, Cgi121p, Pcc1p, and Gon7p; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription","termid":"PBO:0084162"}


id: GO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a decrease in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of decreased arterial stretch","termid":"GO:0003024"}


id: PBO:0074197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 7","termid":"PBO:0074197"}


id: PBO:0059479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microseminoprotein, prostate associated","termid":"PBO:0059479"}


id: PBO:0076053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STN1 subunit of CST complex","termid":"PBO:0076053"}


id: GO:0061336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shape change of an epithelial cell from a columnar to squamous cell morphology that contributes to the shaping of the Malpighian tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:19783135","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in Malpighian tubule morphogenesis","termid":"GO:0061336"}


id: PBO:0086527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YFL019C is not an essential gene","termid":"PBO:0086527"}


id: PBO:0053058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAS1 like ribosome biogenesis factor","termid":"PBO:0053058"}


id: PBO:0017613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination endonuclease Rec12","termid":"PBO:0017613"}


id: PBO:0042478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 4","termid":"PBO:0042478"}


id: FYPO:0002236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular sterol ester level","synonyms":[{"name":"normal cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"normal cellular sterol ester level during vegetative growth","type":"exact"},{"name":"normal level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002236"}


id: PBO:0039860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 24","termid":"PBO:0039860"}


id: GO:2000793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell proliferation that is involved in heart valve development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart valve development","synonyms":[{"name":"cell proliferation of cardiac valve development","type":"exact"},{"name":"cell proliferation of heart valve development","type":"exact"}],"termid":"GO:2000793"}


id: GO:0060172
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76703],"is_not":false,"summary":null,"term":"GO:0060172"}]},"cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an astral microtubule. An astral microtubule is any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"astral microtubule depolymerization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0060172","terms_by_termid":{"GO:0060172":null}}


id: GO:1905596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of low-density lipoprotein particle receptor binding.","definition_xrefs":["GO_REF:0000059","PMID:22848640","GOC:nc","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low-density lipoprotein particle receptor binding (obsolete GO:1905596)","synonyms":[{"name":"down regulation of LDL receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"down-regulation of LDL receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"downregulation of LDL receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"inhibition of LDL receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein particle receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein receptor binding","type":"narrow"},{"name":"negative regulation of LDL receptor binding","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:1905596"}


id: GO:0007542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transmission of information about sexual status, from the initial general determination, to signals specific to the germ-line.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination","termid":"GO:0007538"},{"relation_name":"part_of","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination, germ-line","termid":"GO:0007542"}


id: PBO:0072659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 1","termid":"PBO:0072659"}


id: PBO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA/biotin carboxylase","termid":"PBO:0000866"}


id: PBO:0082835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis","termid":"PBO:0082835"}


id: FYPO:0003236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from transposable element transcripts measured in a cell is lower than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased transposable element-derived small RNA level","synonyms":[{"name":"decreased accumulation of transposable element-derived small RNAs","type":"related"},{"name":"decreased transposable element-derived small RNA accumulation","type":"related"},{"name":"decreased transposable element-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased transposable element-derived small RNA level during vegetative growth","type":"exact"},{"name":"decreased transposable element-derived small transcript level","type":"exact"},{"name":"decreased transposon-derived small RNA level","type":"exact"},{"name":"reduced transposable element-derived small RNA level","type":"exact"}],"termid":"FYPO:0003236"}


id: PBO:0036418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC50 domain protein, implicated in signal transduction for invasive growth Ivn1","termid":"PBO:0036418"}


id: PBO:0056805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter B, sphingolipid","termid":"PBO:0056805"}


id: PBO:0027948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation_during_mitotic_G1_phase","termid":"PBO:0027948"}


id: PBO:0040081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase C, isozyme F","termid":"PBO:0040081"}


id: FYPO:0007183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased protein kinase activity during mitotic interphase","synonyms":[{"name":"increased protein kinase activity during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007183"}


id: PBO:0073993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3","termid":"PBO:0073993"}


id: MONDO:0019964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymic endocrine tumor is a rare, malignant, primary thymic neoplasm originating from neuroendocrine cells, presenting as a mass within the anterior mediastinum. Patients typically present with nonspecific symptoms, such as chest pain, cough, shortness of breath, or in some cases, superior vena cava syndrome, although patients could be asymptomatic during the early stages or present with multiple endocrine neoplasia type I. Ectopic production of ACTH and serotonin can lead to Cushing syndrome and carcinoid sydrome, respectively.","definition_xrefs":["Orphanet:97289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus neoplasm","termid":"MONDO:0005197"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymic neuroendocrine tumor","secondary_identifiers":["GARD:19361","NCIT:C6430","ONCOTREE:TNET"],"synonyms":[{"name":"neuroendocrine neoplasm of thymus","type":"exact"},{"name":"thymus NET","type":"exact"},{"name":"thymus neuroendocrine neoplasm","type":"exact"},{"name":"thymus neuroendocrine tumor","type":"exact"},{"name":"thymus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"thymus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0019964","xrefs":{"Monarch":{"xref_id":"0019964"}}}


id: FYPO:0006435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of FAD binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased FAD binding","synonyms":[{"name":"increased oxidized flavin adenine dinucleotide binding","type":"exact"}],"termid":"FYPO:0006435"}


id: PR:O94668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.10","synonyms":[{"name":"Spom972h-nse5","type":"exact"},{"name":"non-SMC element 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94668"}


id: PBO:0031524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031524"}


id: PR:000050502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dis1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"SPCC736.14","type":"related"},{"name":"Spom-dis1","type":"exact"},{"name":"dis1","type":"related"},{"name":"phosphoprotein p99","type":"exact"}],"termid":"PR:000050502"}


id: GO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 6 metabotropic glutamate receptor binding","synonyms":[{"name":"type 6 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031803"}


id: MONDO:0007503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microtia","termid":"MONDO:0010920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear without helix","secondary_identifiers":["UMLS:C1851899","OMIM:128800","MEDGEN:343678"],"synonyms":[{"name":"ear without helix","type":"exact"}],"termid":"MONDO:0007503","xrefs":{"Monarch":{"xref_id":"0007503"}}}


id: SO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature amplification of a region containing a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_amplification","termid":"SO:0001880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_amplification","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:transcript_amplification","type":"exact"},{"name":"transcript amplification","type":"exact"}],"termid":"SO:0001889"}


id: MONDO:0001445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Malfunctioning urinary bladder due to central nervous system disorders or damage to the peripheral nerves that are involved in the control of urination. Causes include spinal cord injuries, neural tube defects, brain tumors, strokes, and peripheral neuropathies (e.g., AIDS neuropathy and diabetic neuropathy).","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete neurogenic bladder (obsolete MONDO:0001445)","secondary_identifiers":["HP:0000011","DOID:12143","ICD9:596.54","MESH:D001750","SCTID:398064005"],"synonyms":[{"name":"neurogenic bladder","type":"exact"},{"name":"neurogenic dysfunction of the urinary bladder","type":"exact"},{"name":"neurogenic urinary bladder disorder","type":"exact"},{"name":"neuropathic bladder","type":"exact"},{"name":"obsolete neurogenic bladder (disease)","type":"exact"}],"termid":"MONDO:0001445","xrefs":{"Monarch":{"xref_id":"0001445"}}}


id: MONDO:0054699
data:
  {"annotated_genes":["SJAG_03151","SJAG_04541"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85791,85792],"is_not":false,"summary":null,"term":"MONDO:0054699"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03151":null,"SJAG_04541":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060916","GARD:18446","OMIM:617591","MEDGEN:1648456","UMLS:C4747850"],"synonyms":[{"name":"PRAAS3","type":"related"},{"name":"proteasome-associated autoinflammatory syndrome 3","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome 3 and digenic forms","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome 3, digenic","type":"related"}],"termid":"MONDO:0054699","terms_by_termid":{"MONDO:0054699":null},"xrefs":{"Monarch":{"xref_id":"0054699"}}}


id: PBO:0064522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C","termid":"PBO:0064522"}


id: PBO:0066513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X associated ankyrin containing protein","termid":"PBO:0066513"}


id: GO:0030402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrilysin-2 activity (obsolete GO:0030402)","synonyms":[{"name":"MMP-26","type":"exact"},{"name":"matrilysin-2 activity","type":"exact"},{"name":"matrix metalloproteinase 26","type":"exact"}],"termid":"GO:0030402"}


id: PBO:0041822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine synthase 1","termid":"PBO:0041822"}


id: MONDO:0003586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant adipose tissue neoplasm of the esophagus, characterized by multivacuolated lipoblasts with hyperchromatic nuclei, a solid pattern of growth, and a rich vascular network. It arises from the mucosal and submucosal layers of the lower esophagus. Clinical presentation includes progressive dysphagia, nausea, throat discomfort, and foreign body sensation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagus sarcoma","termid":"MONDO:0001204"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus liposarcoma","secondary_identifiers":["NCIT:C5705","UMLS:C1333456","MEDGEN:232163","DOID:5694"],"synonyms":[{"name":"esophageal liposarcoma","type":"exact"},{"name":"esophagus liposarcoma","type":"exact"},{"name":"liposarcoma of esophagus","type":"exact"},{"name":"liposarcoma of oesophagus","type":"exact"},{"name":"liposarcoma of the esophagus","type":"exact"},{"name":"liposarcoma of the oesophagus","type":"exact"}],"termid":"MONDO:0003586","xrefs":{"Monarch":{"xref_id":"0003586"}}}


id: PBO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 168 member A","termid":"PBO:0047124"}


id: MONDO:0014885
data:
  {"annotated_genes":["SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86482],"is_not":false,"summary":null,"term":"MONDO:0014885"}]},"cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the AP3D1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0005066"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617050","GARD:16180","Orphanet:664511","UMLS:C4310746","MEDGEN:934713"],"synonyms":[{"name":"AP3D1 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10; HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in AP3D1","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 10","type":"exact"}],"termid":"MONDO:0014885","terms_by_termid":{"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0014885"}}}


id: PBO:0087482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromosomal passenger complex (CPC); CPC is comprised of Ipl1p-Sli15p-Bir1p-Nbl1p and regulates chromosome segregation; required for chromosome bi-orientation and for spindle assembly checkpoint activation upon reduced sister kinetochore tension; relative distribution to shortened microtubules increases upon DNA replication stress; sumoylated in an Mms21p-dependent manner; human survivin homolog","termid":"PBO:0087482"}


id: PBO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_M-factor_in_growth_medium","termid":"PBO:0031026"}


id: PBO:0045236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 4","termid":"PBO:0045236"}


id: PBO:0059095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 1","termid":"PBO:0059095"}


id: MONDO:0022883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial and skeletal defects","termid":"MONDO:0022883","xrefs":{"Monarch":{"xref_id":"0022883"}}}


id: PBO:0028300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028300"}


id: GO:0006256
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76841],"is_not":false,"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"UDP breakdown","type":"exact"},{"name":"UDP catabolism","type":"exact"},{"name":"UDP degradation","type":"exact"}],"termid":"GO:0006256","terms_by_termid":{"GO:0006256":null}}


id: MONDO:0005154
data:
  {"annotated_genes":["SJAG_01012","SJAG_03363","SJAG_04109","SJAG_01950","SJAG_00358","SJAG_02876","SJAG_00175","SJAG_03961","SJAG_02049","SJAG_04944","SJAG_02015","SJAG_05194","SJAG_01841","SJAG_00409","SJAG_02896","SJAG_01372","SJAG_04956","SJAG_01166","SJAG_03011","SJAG_03535","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[85679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[87149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[87333,87334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[86079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[87001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[86230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[86285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024568"},{"annotations":[85493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014659"},{"annotations":[87206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032844"},{"annotations":[86488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[86427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[85468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"},{"annotations":[85825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[87272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"},{"annotations":[85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[87018,87019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013771"},{"annotations":[86098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[86743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A disease involving the liver.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatobiliary disorder","termid":"MONDO:0002515"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00358":null,"SJAG_00409":null,"SJAG_00938":null,"SJAG_01012":null,"SJAG_01166":null,"SJAG_01372":null,"SJAG_01841":null,"SJAG_01950":null,"SJAG_02015":null,"SJAG_02049":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03535":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_04956":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:409","ICD10CM:K70-K77","ICD9:573.9","NCIT:C3196","UMLS:C4021780","MESH:D008107","SCTID:235856003","EFO:0001421","ICD9:573.8","MEDGEN:893061"],"synonyms":[{"name":"disease of liver","type":"exact"},{"name":"disease or disorder of liver","type":"exact"},{"name":"disorder of liver","type":"exact"},{"name":"hepatic disease","type":"exact"},{"name":"hepatic disorder","type":"exact"},{"name":"liver and intrahepatic bile duct disorder","type":"exact"},{"name":"liver disease","type":"exact"},{"name":"liver disease or disorder","type":"exact"},{"name":"liver disorder","type":"exact"}],"termid":"MONDO:0005154","terms_by_termid":{"MONDO:0007256":null,"MONDO:0007369":null,"MONDO:0008265":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0010420":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013000":null,"MONDO:0013111":null,"MONDO:0013771":null,"MONDO:0013995":null,"MONDO:0014659":null,"MONDO:0014860":null,"MONDO:0024568":null,"MONDO:0030810":null,"MONDO:0031040":null,"MONDO:0032844":null,"MONDO:0054743":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0005154"}}}


id: PBO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx2","termid":"PBO:0002453"}


id: FYPO:0000639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly begins later than normal.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of septum assembly","synonyms":[{"name":"delayed onset of division septum assembly","type":"exact"},{"name":"delayed onset of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"delayed onset of septation","type":"broad"},{"name":"delayed onset of septum assembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of septum assembly during vegetative growth","type":"exact"},{"name":"delayed onset of septum formation","type":"exact"},{"name":"delayed septum assembly","type":"exact"}],"termid":"FYPO:0000639"}


id: PBO:0013123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl1","termid":"PBO:0013123"}


id: PR:Q9URX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup155 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin C890.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.06","secondary_identifiers":["UniProtKB:Q9URX8"],"synonyms":[{"name":"Spom972h-NUP155","type":"exact"}],"termid":"PR:Q9URX8"}


id: PBO:0067788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 90","termid":"PBO:0067788"}


id: MOD:01953
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a four-iron cluster to tetrakis-L-cysteinyl tetrairon octanitrosyl.","definition_xrefs":["RESID:AA0599","PubMed:21182249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl tetrairon octanitrosyl","termid":"MOD:01953"}


id: PBO:0027615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_following_normal_mitosis","termid":"PBO:0027615"}


id: MOD:00198
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to D-alanine.","definition_xrefs":["RESID:AA0191#ALA","PubMed:7287302","PubMed:7961627","PubMed:15023056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"D-alanine","termid":"MOD:00862"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine (Ala)","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-Ala(Ala)","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"}],"termid":"MOD:00198"}


id: PBO:0071196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 37","termid":"PBO:0071196"}


id: MONDO:0012125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the GJC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizaeus-Merzbacher-like disease","termid":"MONDO:0017226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 2","secondary_identifiers":["GARD:17293","MESH:C563855","Orphanet:280282","OMIM:608804","MEDGEN:325157","UMLS:C1837355","DOID:0060787"],"synonyms":[{"name":"GJC2 leukodystrophy","type":"exact"},{"name":"HLD2","type":"exact"},{"name":"PMLD1","type":"exact"},{"name":"Pelizaeus-Merzbacher-like disease 1","type":"exact"},{"name":"Pelizaeus-Merzbacher-like disease due to GJC2 mutation","type":"exact"},{"name":"Pelizaeus-Merzbacher-like disease, 1","type":"related"},{"name":"hypomyelinating leukodystrophy type 2","type":"exact"},{"name":"leukodystrophy caused by mutation in GJC2","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 2","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 2","type":"exact"}],"termid":"MONDO:0012125","xrefs":{"Monarch":{"xref_id":"0012125"}}}


id: RO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"},{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_in_by","termid":"RO:0002625"}


id: PBO:0072329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 15","termid":"PBO:0072329"}


id: PBO:0069029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 274, pseudogene","termid":"PBO:0069029"}


id: PBO:0077043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopoietin","termid":"PBO:0077043"}


id: GO:0007195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0007195"}


id: GO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in host environment (obsolete GO:0052122)","synonyms":[{"name":"negative aerotaxis in response to host environment","type":"exact"}],"termid":"GO:0052122"}


id: PBO:0036243
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli PyrB","termid":"PBO:0036243"}


id: GO:0097048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["CL:0000451","GOC:BHF","PMID:15059845","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell apoptotic process","synonyms":[{"name":"dendritic cell apoptosis","type":"narrow"}],"termid":"GO:0097048"}


id: MOD:01043
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a p-nitrobenzyl group for the hydrogen atom of a carboxyl group.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p-nitrobenzyl ester modified residue","synonyms":[{"name":"ONb","type":"exact"}],"termid":"MOD:01043"}


id: PBO:0081267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B","termid":"PBO:0081267"}


id: SO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A linear clone derived from lambda bacteriophage. The genes involved in the lysogenic pathway are removed from the from the viral DNA. Up to 25 kb of foreign DNA can then be inserted into the lambda genome.","definition_xrefs":["ISBN:0-1767-2380-8"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000160 lambda_clone (obsolete SO:0000160)","termid":"SO:0000160"}


id: PBO:0055832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 2","termid":"PBO:0055832"}


id: GO:1905719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the perinuclear region of the cytoplasm.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to perinuclear region of cytoplasm","synonyms":[{"name":"protein localisation in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localisation to perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization to perinuclear cytoplasm","type":"exact"}],"termid":"GO:1905719"}


id: PBO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B3","termid":"PBO:0042186"}


id: PBO:0045796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDIL3 divergent transcript","termid":"PBO:0045796"}


id: PBO:0090004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp41","termid":"PBO:0090004"}


id: PBO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 32","termid":"PBO:0060044"}


id: GO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + arsenite + 2 oxidized azurin = 2 H+ + 2 reduced azurin + arsenate.","definition_xrefs":["MetaCyc:1.20.98.1-RXN","EC:1.20.9.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with a copper protein as acceptor","termid":"GO:0052882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arsenate reductase (azurin) activity","secondary_identifiers":["UM-BBD_reactionID:r0634","GO:0018691","RHEA:18701"],"synonyms":[{"name":"arsenite oxidase activity","type":"related"},{"name":"arsenite:azurin oxidoreductase activity","type":"related"}],"termid":"GO:0050611"}


id: PBO:0081872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 814","termid":"PBO:0081872"}


id: PBO:0084138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity cyclic AMP phosphodiesterase; component of the cAMP-dependent protein kinase signaling system, protects the cell from extracellular cAMP, contains readthrough motif surrounding termination codon","termid":"PBO:0084138"}


id: PBO:0039213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C4","termid":"PBO:0039213"}


id: PBO:0041166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG2 divergent transcript","termid":"PBO:0041166"}


id: MONDO:0011141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"megaloblastic anemia, folate-responsive","secondary_identifiers":["OMIM:601775","UMLS:C2749656","MEDGEN:440842"],"synonyms":[{"name":"MEGAF","type":"exact"},{"name":"folate level in erythrocytes","type":"exact"}],"termid":"MONDO:0011141","xrefs":{"Monarch":{"xref_id":"0011141"}}}


id: SO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000117 transcript_with_readthrough_stop_codon (obsolete SO:0000117)","termid":"SO:0000117"}


id: MONDO:0004544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade II, usually recurring meningioma characterized by the predominance of tissues that are histologically similar to chordoma.","definition_xrefs":["NCIT:C6908"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"clear cell meningioma","termid":"MONDO:0002918"},{"relation_name":"is_a","term_name":"grade II meningioma","termid":"MONDO:0045056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordoid meningioma","secondary_identifiers":["ONCOTREE:CHOM","UMLS:C1370510","MEDGEN:235089","DOID:8368"],"synonyms":[{"name":"CHOM","type":"related"},{"name":"chordoid meningioma","type":"exact"},{"name":"meningioma, chordoid","type":"exact"},{"name":"meningioma, chordoid (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004544","xrefs":{"Monarch":{"xref_id":"0004544"}}}


id: MONDO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare transmittable degenerative disorder of the brain caused by prions. Morphologically it is characterized by spongiform degeneration of the cerebral and cerebellar cortex. Signs and symptoms include sleep disturbances, personality changes, aphasia, ataxia, muscle atrophy and weakness, visual loss, and myoclonus. It usually leads to death within a year from the onset of the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Creutzfeldt Jacob disease","secondary_identifiers":["ICD9:046.19","NCIT:C26802","DOID:11949","UMLS:C0022336","ICD9:046.1","EFO:0004226","MESH:D007562","MEDGEN:7179","SCTID:792004"],"synonyms":[{"name":"CJD","type":"exact"},{"name":"CJD (Creutzfeldt Jakob disease)","type":"exact"},{"name":"Creutzfeldt Jacob syndrome","type":"exact"},{"name":"Creutzfeldt Jakob Disease","type":"exact"},{"name":"Creutzfeldt Jakob disease","type":"exact"},{"name":"Creutzfeldt-Jacob disease","type":"exact"},{"name":"Creutzfeldt-Jakob disease","type":"related"},{"name":"Jakob-Creutzfeldt disease","type":"exact"},{"name":"Subacute spongiform encephalopathy","type":"exact"},{"name":"classic Creutzfeldt-Jakob disease","type":"exact"},{"name":"transmissible virus dementia","type":"exact"}],"termid":"MONDO:0005357","xrefs":{"Monarch":{"xref_id":"0005357"}}}


id: MONDO:0025481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An infectious disease of non-human animals that may be transmitted to humans or may be transmitted from humans to non-human animals, caused by a pathogen (an infectious agent, including bacteria, viruses, parasites, prions, etc).","definition_xrefs":["Wikipedia:Zoonosis","MESH:D015047"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"excluded_subClassOf","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"excluded_subClassOf","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"name":"obsolete zoonosis (obsolete MONDO:0025481)","secondary_identifiers":["NCIT:C35803"],"synonyms":[{"name":"disease, zoonotic","type":"related"},{"name":"disease, zoonotic infectious","type":"related"},{"name":"diseases, zoonotic","type":"related"},{"name":"diseases, zoonotic infectious","type":"related"},{"name":"infection, zoonotic","type":"related"},{"name":"infections, zoonotic","type":"related"},{"name":"infectious disease, zoonotic","type":"related"},{"name":"infectious diseases, zoonotic","type":"related"},{"name":"zoonoses","type":"exact"},{"name":"zoonotic disease","type":"exact"},{"name":"zoonotic diseases","type":"exact"},{"name":"zoonotic infection","type":"exact"},{"name":"zoonotic infections","type":"exact"},{"name":"zoonotic infectious disease","type":"related"},{"name":"zoonotic infectious diseases","type":"related"}],"termid":"MONDO:0025481","xrefs":{"Monarch":{"xref_id":"0025481"}}}


id: PBO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108F (pseudogene)","termid":"PBO:0044817"}


id: GO:0031491
data:
  {"annotated_genes":["SJAG_00925","SJAG_03694","SJAG_02401","SJAG_04036","SJAG_01146","SJAG_03945","SJAG_03997","SJAG_05192","SJAG_01823","SJAG_01653","SJAG_02311","SJAG_01046","SJAG_04670","SJAG_02416","SJAG_03128","SJAG_00266","SJAG_02348","SJAG_00914","SJAG_00913","SJAG_03905","SJAG_04879","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71706,74118,75204,77230,77852,78988,79846,90453,93119,94448,96520,97447,103276,103598,108256,108358,110330,110610,113691,115803,117411,117518],"is_not":false,"summary":null,"term":"GO:0031491"}]},"cv_name":"molecular_function","definition":"Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01046":null,"SJAG_01146":null,"SJAG_01653":null,"SJAG_01823":null,"SJAG_02311":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_03128":null,"SJAG_03694":null,"SJAG_03905":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04036":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_05192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nucleosome binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031491","terms_by_termid":{"GO:0031491":null}}


id: MONDO:0015056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired angioedema type 1 (AAE 1) is a type of acquired angioedema (AAE) characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired angioedema","termid":"MONDO:0019624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired angioedema type 1","secondary_identifiers":["GARD:19748","MEDGEN:1814460","UMLS:C5680380"],"synonyms":[{"name":"acquired angioneurotic edema type 1","type":"exact"},{"name":"acquired angioneurotic oedema type 1","type":"exact"}],"termid":"MONDO:0015056","xrefs":{"Monarch":{"xref_id":"0015056"}}}


id: MOD:01701
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes a hydrogen cation, a proton, forming an anionic residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deprotonated residue","synonyms":[{"name":"H-NRes","type":"exact"}],"termid":"MOD:01701"}


id: PBO:0075410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPACA6 antisense RNA 1","termid":"PBO:0075410"}


id: PBO:0076114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 intronic transcript 1","termid":"PBO:0076114"}


id: PBO:0062039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 8","termid":"PBO:0062039"}


id: GO:1904187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GOC:TermGenie","PMID:12200142","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"regulates","term_name":"symbiont-mediated transformation of host cell","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transformation of host cell by virus","synonyms":[{"name":"regulation of viral transformation","type":"exact"},{"name":"regulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904187"}


id: PBO:0012550
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septum promoting GTPase","termid":"PBO:0012550"}


id: PBO:0072705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 1","termid":"PBO:0072705"}


id: PBO:0059355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16 pseudogene 3","termid":"PBO:0059355"}


id: PBO:0068575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 26, pseudogene","termid":"PBO:0068575"}


id: PBO:0073409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 12","termid":"PBO:0073409"}


id: PBO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal-neural cortex 1","termid":"PBO:0046307"}


id: PBO:0083217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene ARO9/YHR137W; identified by gene-trapping, expression analysis, and genome-wide homology searching","termid":"PBO:0083217"}


id: PBO:0028030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_replication","termid":"PBO:0028030"}


id: PBO:0056276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2A member 1","termid":"PBO:0056276"}


id: GO:0180035
data:
  {"annotated_genes":["SJAG_04500","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89193],"is_not":false,"summary":null,"term":"GO:0180035"},{"annotations":[108068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180034"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of one or more primary lncRNA transcripts into one or more mature lncRNA molecules.","definition_xrefs":["PMID:31276588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_04500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"lncRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180035","terms_by_termid":{"GO:0180034":null,"GO:0180035":null}}


id: FYPO:0004924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"chromosome region localization phenotype during vegetative growth","termid":"FYPO:0008381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere tethering at nuclear periphery during vegetative growth","synonyms":[{"name":"normal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere anchoring at nuclear periphery","type":"exact"},{"name":"normal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0004924"}


id: GO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:dph","GOC:yaf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"negatively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney development","synonyms":[{"name":"negative regulation of nephrogenesis","type":"related"}],"termid":"GO:0090185"}


id: PBO:0091698
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae sgt1","termid":"PBO:0091698"}


id: PBO:0034046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_similarity_relationship_with","termid":"PBO:0034046"}


id: PBO:0068898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 140, pseudogene","termid":"PBO:0068898"}


id: MONDO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphangiosarcoma (obsolete MONDO:0002392)","termid":"MONDO:0002392","xrefs":{"Monarch":{"xref_id":"0002392"}}}


id: PBO:0112485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex/ ATP synthase assembly protein Mra2","termid":"PBO:0112485"}


id: GO:0045733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acetate catabolic process","secondary_identifiers":["GO:0019663"],"synonyms":[{"name":"acetate breakdown","type":"exact"},{"name":"acetate catabolism","type":"exact"},{"name":"acetate degradation","type":"exact"},{"name":"homoacetate catabolic process","type":"related"}],"termid":"GO:0045733"}


id: GO:0016837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a polysaccharide.","definition_xrefs":["EC:4.2.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}


id: PBO:0063101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD6G antisense RNA 1","termid":"PBO:0063101"}


id: GO:0099081
data:
  {"annotated_genes":["SJAG_05220","SJAG_01297","SJAG_02045","SJAG_01775","SJAG_00773","SJAG_05024","SJAG_00594","SJAG_00723","SJAG_01837","SJAG_02624","SJAG_02761","SJAG_04387","SJAG_03703","SJAG_05266","SJAG_00845","SJAG_02651","SJAG_03264","SJAG_01546","SJAG_00655","SJAG_03145","SJAG_01224","SJAG_00851","SJAG_00140","SJAG_00332","SJAG_01196","SJAG_01613","SJAG_04887","SJAG_00930","SJAG_03073","SJAG_02431","SJAG_03540","SJAG_02286","SJAG_01215","SJAG_02040","SJAG_00918","SJAG_02566","SJAG_04745","SJAG_03052","SJAG_02695","SJAG_03088","SJAG_01330","SJAG_04841","SJAG_00113","SJAG_02509","SJAG_00030","SJAG_02336","SJAG_01993","SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109432,76070,76983,95643,71927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[104372,99563,107580,107791,112514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[98968,91732,101784,104242,108621,99564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[104106,95564,97929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[75426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097268"},{"annotations":[104903,91502,113150,105231,118528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[97623],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[100730,89974,102678,97325,104244,114426,119042],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[88101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[74206,97118,119994,68467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[99569,100733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[119681,79826,80257,105014,71013,99571],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[108627,79257,91736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[97328],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[107871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[100735,106690,119048,101789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[98972,118534,107872,99574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[98006,118267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032982"},{"annotations":[91739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[101792,95134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[101793,97329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[91741],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[63269,77413,90102,100885,104059,76700,76131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"A polymeric supramolecular structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular 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polymer","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:30726171":null},"termid":"GO:0099081","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0032982":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:0062194":null,"GO:0097268":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990941":null}}


id: GO:1905048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GO_REF:0000059","PMID:26473732","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metallopeptidase activity","synonyms":[{"name":"regulation of metalloprotease activity","type":"narrow"},{"name":"regulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905048"}


id: FYPO:0002158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to G2/M transition DNA damage checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished response to mitotic G2/M transition checkpoint signaling","termid":"FYPO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished response to mitotic G2/M transition DNA damage checkpoint signaling","synonyms":[{"name":"abolished mitotic G2/M transition DNA damage checkpoint arrest","type":"related"},{"name":"abolished response to mitotic G2 DNA damage checkpoint signaling","type":"exact"},{"name":"cell cycle arrest resulting from mitotic G2/M transition DNA damage activation abolished","type":"exact"},{"name":"response to mitotic G2/M transition DNA damage checkpoint signaling abolished","type":"exact"}],"termid":"FYPO:0002158"}


id: GO:0160172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=31 or pseudo T=31 symmetry.","definition_xrefs":["VZ:7036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=31/pseudo31 icosahedral capsid","termid":"GO:0160172"}


id: PBO:0078513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM6-TRIM34 readthrough","termid":"PBO:0078513"}


id: PBO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 35","termid":"PBO:0048324"}


id: PBO:0090019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C Elc1","termid":"PBO:0090019"}


id: GO:0032991
data:
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id: FYPO:0004575
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id: PBO:0116981
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id: MONDO:0003644
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id: GO:0034002
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id: GO:0050525
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id: PBO:0116734
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id: GO:0051546
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id: PBO:0061892
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id: MONDO:0012710
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id: PBO:0061103
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id: MONDO:0009933
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id: GO:0048259
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id: PBO:0089768
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id: MONDO:0000090
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id: PBO:0026871
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id: MONDO:0004980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common chronic pruritic inflammatory skin disease with a strong genetic component. Onset typically occurs during the first 2 years of life.","definition_xrefs":["OMIM:603165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"atopic eczema","secondary_identifiers":["SCTID:200775004","ICD10CM:L20","NCIT:C3001","UMLS:C0011615","DOID:3310","MEDGEN:41502","ICD9:691","icd11.foundation:215767047","SCTID:24079001","HP:0001047","MESH:D003876","ICD9:691.8","EFO:0000274"],"synonyms":[{"name":"ATOD","type":"exact"},{"name":"Besnier's prurigo","type":"exact"},{"name":"allergic dermatitis","type":"exact"},{"name":"allergic form of dermatitis","type":"exact"},{"name":"atopic dermatitis","type":"exact"},{"name":"atopic eczema","type":"exact"},{"name":"atopic neurodermatitis","type":"exact"},{"name":"dermatitis, atopic","type":"exact"},{"name":"eczema","type":"exact"},{"name":"eczema, atopic","type":"exact"},{"name":"eczematous dermatitis","type":"exact"}],"termid":"MONDO:0004980","xrefs":{"Monarch":{"xref_id":"0004980"}}}


id: PBO:0047067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member B","termid":"PBO:0047067"}


id: GO:0007056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle assembly","termid":"GO:0090306"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0140013","GO:0044085","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis","synonyms":[{"name":"female meiotic spindle assembly","type":"related"}],"termid":"GO:0007056"}


id: GO:0090238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of icosanoid secretion","termid":"GO:0032305"},{"relation_name":"is_a","term_name":"regulation of arachidonate secretion","termid":"GO:0090237"},{"relation_name":"positively_regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of arachidonate secretion","synonyms":[{"name":"positive regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090238"}


id: PBO:0083142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of verified gene NUP53/YMR153W","termid":"PBO:0083142"}


id: GO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from a DNA template as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-templated transcription in response to stress (obsolete GO:0043620)","synonyms":[{"name":"regulation of DNA-dependent transcription in response to stress","type":"exact"}],"termid":"GO:0043620"}


id: GO:0120032
data:
  {"annotated_genes":["SJAG_04509","SJAG_00514","SJAG_01794","SJAG_03453","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91205,88244,90225,93839,111753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120032","terms_by_termid":{"GO:1902917":null}}


id: GO:0021511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord patterning","termid":"GO:0021511"}


id: PBO:0113368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates the vacuolar V-ATPase; inhibits V1-ATPase activity and triggers ATP-dependent disassembly of the V-ATPase holoenzyme, counteracting the function of the RAVE complex; localizes to the cytoplasm; required for retention of the vacuolar-ATPase V0 domain subunit Stv1p in pre-vacuolar compartments; involved in resistance to oxidative damage; member of a conserved family of TLDc domain proteins found in eukaryotes; contains an N-terminal EF-hand-like domain","termid":"PBO:0113368"}


id: PBO:0076473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAO kinase 1","termid":"PBO:0076473"}


id: PBO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase inhibitor (predicted)","termid":"PBO:0001549"}


id: PBO:0054848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2262","termid":"PBO:0054848"}


id: PBO:0060188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 6, oligomeric mucus/gel-forming","termid":"PBO:0060188"}


id: FYPO:0005736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation is decreased.","definition_xrefs":["PomBase:mah","PMID:27630265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000121","FYPO:0005447"],"is_obsolete":false,"name":"decreased prospore membrane formation","synonyms":[{"name":"decreased ascospore-type prospore membrane assembly","type":"exact"},{"name":"decreased forespore membrane formation","type":"exact"},{"name":"reduced prospore membrane formation","type":"exact"}],"termid":"FYPO:0005736"}


id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: PR:O74435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A centrin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04288","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.04","secondary_identifiers":["UniProtKB:O74435"],"synonyms":[{"name":"Spom972h-CETN3","type":"exact"}],"termid":"PR:O74435"}


id: GO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine = D-arginine.","definition_xrefs":["EC:5.1.1.9","MetaCyc:ARGININE-RACEMASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"arginine racemase activity","secondary_identifiers":["RHEA:18069"],"termid":"GO:0047679"}


id: GO:0140989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-deoxyloganate + O2 + reduced [NADPH-hemoprotein reductase] = H+ + H2O + loganate + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:57576","PMID:24710322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"7-deoxyloganate 7-hydroxylase activity","termid":"GO:0140989"}


id: GO:0031391
data:
  {"annotated_genes":["SJAG_00272","SJAG_01010","SJAG_04150","SJAG_00729","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65096,72978,77523,78048,113213],"is_not":false,"summary":null,"term":"GO:0031391"}]},"cv_name":"cellular_component","definition":"A pentameric replication factor C (RLC) complex, which unloads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) from chromatin and has roles in telomere length regulation and other aspects of genome stability. In Saccharomyces the subunits are known as Elg1p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.","definition_xrefs":["PMID:23499004","PMID:14614842","PMID:27664980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Elg1 RFC-like complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Elg1-RFC","type":"exact"},{"name":"Elg1-RLC","type":"exact"},{"name":"RFC (Elg1)","type":"exact"}],"termid":"GO:0031391","terms_by_termid":{"GO:0031391":null}}


id: MONDO:0013250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 17p12-q11.2.","definition_xrefs":["DOID:0110531","PMID:19888295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 85","secondary_identifiers":["OMIM:613392","GARD:22635","MEDGEN:463629","UMLS:C3160740"],"synonyms":[{"name":"DFNB85","type":"narrow"},{"name":"autosomal recessive deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 85","type":"narrow"},{"name":"deafness, autosomal recessive 85","type":"narrow"}],"termid":"MONDO:0013250","xrefs":{"Monarch":{"xref_id":"0013250"}}}


id: MONDO:0015312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral choanal atresia is a, usually sporadic, congenital anomaly that is more commonly seen in females than in males (2:1), where the nose is blocked by bony or soft tissue formed during embryologic development on only one side (more commonly on the right side) and which is characterized by nasal obstruction and rhinorrhea, usually presenting at birth but that may go undetected until a respiratory infection aggravates the condition.","definition_xrefs":["Orphanet:137917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia","termid":"MONDO:0012155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, unilateral","secondary_identifiers":["GARD:19889","MEDGEN:1843076","UMLS:C5680630","icd11.foundation:1247369366"],"termid":"MONDO:0015312","xrefs":{"Monarch":{"xref_id":"0015312"}}}


id: PBO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 19","termid":"PBO:0060072"}


id: MONDO:0008758
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87410],"is_not":false,"summary":null,"term":"MONDO:0008758"}]},"cv_name":"mondo","definition":"A cerebrohepatopathy and a rare and severe form of mitochondrial DNA (mtDNA) depletion syndrome characterized by the triad of progressive developmental regression, intractable seizures, and hepatic failure.","definition_xrefs":["Orphanet:726"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, hepatocerebral form","termid":"MONDO:0100512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 4a","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35257","MEDGEN:60012","SCTID:20415001","DOID:0080122","UMLS:C0205710","ICD9:330.8","OMIM:203700","MedDRA:10062943","DOID:1442","GARD:5783"],"synonyms":[{"name":"AHD","type":"exact"},{"name":"AHS","type":"exact"},{"name":"Alper syndrome","type":"exact"},{"name":"Alper's disease","type":"exact"},{"name":"Alper's syndrome","type":"exact"},{"name":"Alpers Disease","type":"exact"},{"name":"Alpers Huttenlocher disease","type":"exact"},{"name":"Alpers Huttenlocher syndrome","type":"exact"},{"name":"Alpers diffuse Degeneration of cerebral Gray matter with hepatic cirrhosis","type":"related"},{"name":"Alpers diffuse Degeneration of cerebral Grey matter with hepatic cirrhosis","type":"related"},{"name":"Alpers disease","type":"exact"},{"name":"Alpers progressive infantile poliodystrophy","type":"exact"},{"name":"Alpers progressive sclerosing poliodystrophy","type":"exact"},{"name":"Alpers syndrome","type":"exact"},{"name":"Alpers' disease or gray-matter degeneration","type":"exact"},{"name":"Alpers-Huttenlocher","type":"exact"},{"name":"Alpers-Huttenlocher syndrome","type":"exact"},{"name":"MTDPS4A","type":"related"},{"name":"PNDC","type":"related"},{"name":"Poliodystrophia cerebri progressiva","type":"related"},{"name":"diffuse cerebral degeneration in infancy","type":"related"},{"name":"infantile poliodystrophy","type":"related"},{"name":"mitochondrial DNA depletion syndrome 4A","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 4A (Alpers type)","type":"related"},{"name":"mitochondrial DNA depletion syndrome type 4a","type":"exact"},{"name":"neuronal Degeneration of childhood with liver disease, progressive","type":"related"},{"name":"progressive cerebral poliodystrophy","type":"related"},{"name":"progressive neuronal degeneration of childhood with liver disease","type":"exact"},{"name":"progressive sclerosing poliodystrophy","type":"exact"}],"termid":"MONDO:0008758","terms_by_termid":{"MONDO:0008758":null},"xrefs":{"Monarch":{"xref_id":"0008758"}}}


id: GO:0010169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (200-800 kDa) multiprotein complex formed by 70-kDa and 5-kDa myrosinases, myrosinase- binding proteins (MBPs), MBP-related proteins and myrosinase-associated proteins. The complex has been identified in Brassica napus seeds.","definition_xrefs":["PMID:10682349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"thioglucosidase complex","synonyms":[{"name":"myrosinase complex","type":"exact"}],"termid":"GO:0010169"}


id: GO:1905248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of memory.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25905804"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of memory (obsolete GO:1905248)","synonyms":[{"name":"modulation of memory","type":"narrow"}],"termid":"GO:1905248"}


id: PR:O74742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A folylpolyglutamate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11136:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.17","secondary_identifiers":["UniProtKB:O74742"],"synonyms":[{"name":"FPGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1709.17","type":"related"},{"name":"Spom972h-FPGS","type":"exact"},{"name":"folylpoly-gamma-glutamate synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74742"}


id: PATO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved asymmetrically.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrically curved","termid":"PATO:0001848"}


id: GO:0034941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pryrole-2-carboxylate + H+ = pyrrole + CO2.","definition_xrefs":["UM-BBD_reactionID:r0970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrrole-2-carboxylate decarboxylase activity","secondary_identifiers":["EC:4.1.1.93"],"termid":"GO:0034941"}


id: GO:1902514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of generation of calcium ion transmembrane transport via high voltage-gated calcium channel.","definition_xrefs":["PMID:1611048","GOC:TermGenie","GOC:pg","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:0061577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"regulation of generation of L-type calcium current","type":"related"}],"termid":"GO:1902514"}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: MONDO:0015788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hemophilia B (see this term) that manifests in some women with mutations in the F9 gene (Xq28), encoding coagulation factor IX.","definition_xrefs":["Orphanet:177929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"symptomatic form of hemophilia B in female carriers","secondary_identifiers":["GARD:17077","MEDGEN:1843014","UMLS:C5680505"],"termid":"MONDO:0015788","xrefs":{"Monarch":{"xref_id":"0015788"}}}


id: MONDO:0100382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(6;9)(p23;q34.1). (A cytogenetic abnormality that refers to the translocation of the short arm (p23) of chromosome 6 and the long arm (q34.1) of chromosome 9. It is associated with DEK/NUP214 fusions, acute myeloid leukemia and myelodysplastic syndromes.)","definition_xrefs":["NCIT:C36532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(6;9)(p23;q34.1)","secondary_identifiers":["DOID:0081080","NCIT:C82423"],"synonyms":[{"name":"AML, t(6;9)(p22.3;q34.1)","type":"exact"},{"name":"AML, t(6;9)(p22;q34)","type":"exact"},{"name":"AML, t(6;9)(p23;q34)","type":"exact"},{"name":"AML, t(6;9)(p23;q34.1)","type":"exact"}],"termid":"MONDO:0100382","xrefs":{"Monarch":{"xref_id":"0100382"}}}


id: PBO:0058182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4476","termid":"PBO:0058182"}


id: MONDO:0012868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of hereditary thrombophilia due to congenital protein S deficiency.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete thrombotic disorder due to an acquired coagulation factors defect (obsolete MONDO:0016634)","termid":"MONDO:0016634"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary thrombophilia due to congenital protein S deficiency","termid":"MONDO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to protein S deficiency, autosomal dominant","secondary_identifiers":["GARD:18568","MedDRA:10068370","OMIM:612336","Orphanet:26349","DOID:0111900","UMLS:C3278211","MEDGEN:479841","MESH:C567077"],"synonyms":[{"name":"THPH5","type":"related"},{"name":"autosomal dominant hereditary thrombophilia due to congenital protein S deficiency","type":"exact"},{"name":"hereditary thrombophilia due to congenital protein S deficiency, autosomal dominant","type":"exact"},{"name":"protein S acquired deficiency","type":"related"},{"name":"thrombophilia 5 due to protein S deficiency, autosomal dominant","type":"exact"},{"name":"thrombophilia due to protein S deficiency, autosomal dominant","type":"exact"}],"termid":"MONDO:0012868","xrefs":{"Monarch":{"xref_id":"0012868"}}}


id: MONDO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"renal hypertension","termid":"MONDO:0001105"},{"relation_name":"is_a","term_name":"malignant hypertension","termid":"MONDO:0006846"},{"relation_name":"is_a","term_name":"hypertensive nephropathy","termid":"MONDO:0024633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"malignant hypertensive renal disease","secondary_identifiers":["MEDGEN:510034","UMLS:C0155593","DOID:10177","ICD9:403.00","SCTID:65443008"],"termid":"MONDO:0000959","xrefs":{"Monarch":{"xref_id":"0000959"}}}


id: GO:0047093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + quinolin-4-ol = H2O + NAD+ + quinoline-3,4-diol.","definition_xrefs":["RHEA:19325","EC:1.14.13.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyquinoline 3-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.62-RXN","KEGG_REACTION:R05154"],"synonyms":[{"name":"1-H-4-oxoquinoline 3-monooxygenase activity","type":"related"},{"name":"quinolin-4(1H)-one 3-monooxygenase activity","type":"related"},{"name":"quinolin-4(1H)-one,NADH:oxygen oxidoreductase (3-oxygenating)","type":"related"}],"termid":"GO:0047093"}


id: GO:1990426
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  {"annotated_genes":["SJAG_02079","SJAG_01584","SJAG_03300","SJAG_03898","SJAG_03843","SJAG_01410","SJAG_02992","SJAG_01374","SJAG_04272","SJAG_02198","SJAG_01832","SJAG_02439","SJAG_01221","SJAG_03780","SJAG_02822","SJAG_01076","SJAG_01677","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64397,89524,91309,95193,95436,96371,96536,98601,99307,108105,108129,109461,109935,112908,117196],"is_not":false,"summary":null,"term":"GO:1990426"},{"annotations":[89355,106508,116809],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Replication fork processing that includes recombination between DNA near the arrested fork and homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["PMID:23093942","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork processing","termid":"GO:0031297"},{"relation_name":"is_a","term_name":"mitotic DNA replication maintenance of fidelity","termid":"GO:1990505"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02439":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03300":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1903211"],"synonyms":[{"name":"homologous recombination dependent replication fork recovery","type":"related"},{"name":"homologous recombination-dependent replication fork processing","type":"exact"},{"name":"mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"mitotic recombination involved in replication fork processing","type":"related"},{"name":"mitotic recombination involved in replication fork restart","type":"related"},{"name":"mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1990426","terms_by_termid":{"GO:0120292":null,"GO:1990426":null}}


id: GO:1905268
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  {"annotated_genes":["SJAG_04369","SJAG_02723","SJAG_03255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107027,77644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization.","definition_xrefs":["PMID:654321","GOC:TermGenie","GOC:pr","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"negatively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03255":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1903309","GO:0045798"],"synonyms":[{"name":"down regulation of chromatin assembly or disassembly","type":"related"},{"name":"down regulation of chromatin organisation","type":"exact"},{"name":"down regulation of chromatin organization","type":"exact"},{"name":"down regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"down-regulation of chromatin assembly or disassembly","type":"related"},{"name":"down-regulation of chromatin organisation","type":"exact"},{"name":"down-regulation of chromatin organization","type":"exact"},{"name":"down-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"downregulation of chromatin assembly or disassembly","type":"related"},{"name":"downregulation of chromatin organisation","type":"exact"},{"name":"downregulation of chromatin organization","type":"exact"},{"name":"downregulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"inhibition of chromatin assembly or disassembly","type":"narrow"},{"name":"inhibition of chromatin organisation","type":"narrow"},{"name":"inhibition of chromatin organization","type":"narrow"},{"name":"inhibition of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"negative regulation of chromatin assembly or disassembly","type":"related"},{"name":"negative regulation of chromatin assembly/disassembly","type":"exact"},{"name":"negative regulation of chromatin modification","type":"related"},{"name":"negative regulation of chromatin organisation","type":"exact"},{"name":"negative regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905268","terms_by_termid":{"GO:0060906":null,"GO:0061188":null}}


id: PBO:0015683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic1","termid":"PBO:0015683"}


id: GO:0035772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-13 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-13","termid":"GO:0035963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-13-mediated signaling pathway","synonyms":[{"name":"IL-13-mediated signaling pathway","type":"exact"},{"name":"interleukin-13-mediated signalling pathway","type":"exact"}],"termid":"GO:0035772"}


id: PBO:0073721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAIN motif family member 1","termid":"PBO:0073721"}


id: PBO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein Brr6/Brl1","termid":"PBO:0001776"}


id: GO:0071114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to tumstatin, the NC1 domain of the alpha3 chain of type IV collagen.","definition_xrefs":["PMID:12682293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-tumstatin complex","synonyms":[{"name":"ITGAV-ITGB3-COL4A3 complex","type":"narrow"}],"termid":"GO:0071114"}


id: MONDO:0013566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the FANCL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0002280","MONDO:0005046","MONDO:0021190"],"is_obsolete":false,"name":"Fanconi anemia complementation group L","secondary_identifiers":["DOID:0111082","MEDGEN:854018","OMIM:614083","GARD:15754","UMLS:C3469528"],"synonyms":[{"name":"FANCL","type":"exact"},{"name":"FANCL Fanconi anaemia","type":"exact"},{"name":"FANCL Fanconi anemia","type":"exact"},{"name":"Fanconi Anemia, complementation Group 50","type":"related"},{"name":"Fanconi Anemia, complementation group type 50","type":"exact"},{"name":"Fanconi anaemia caused by mutation in FANCL","type":"exact"},{"name":"Fanconi anaemia complementation group type L","type":"exact"},{"name":"Fanconi anemia caused by mutation in FANCL","type":"exact"},{"name":"Fanconi anemia complementation group L","type":"exact"},{"name":"Fanconi anemia complementation group type L","type":"exact"},{"name":"Fanconi anemia, complementation group L","type":"related"}],"termid":"MONDO:0013566","xrefs":{"Monarch":{"xref_id":"0013566"}}}


id: PBO:0081433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285C, pseudogene","termid":"PBO:0081433"}


id: GO:0015748
data:
  {"annotated_genes":["SJAG_00230","SJAG_00589","SJAG_03644","SJAG_03172","SJAG_00760","SJAG_02114","SJAG_00018","SJAG_01225","SJAG_04325","SJAG_16459","SJAG_00232","SJAG_01960","SJAG_05325","SJAG_03338","SJAG_02581","SJAG_04406","SJAG_01229","SJAG_02897","SJAG_03209","SJAG_00669","SJAG_00339","SJAG_01305","SJAG_04328","SJAG_04697","SJAG_04162","SJAG_02132","SJAG_00835","SJAG_03503","SJAG_00576","SJAG_03746","SJAG_03741","SJAG_03050","SJAG_00154","SJAG_00587","SJAG_03710","SJAG_02516","SJAG_04734","SJAG_03452","SJAG_04370","SJAG_02050","SJAG_05268","SJAG_01177","SJAG_06440","SJAG_01095","SJAG_05209","SJAG_01731","SJAG_03851","SJAG_00276","SJAG_02943","SJAG_01945","SJAG_03416","SJAG_00434","SJAG_00612","SJAG_03721","SJAG_03334","SJAG_02957","SJAG_01470"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[74967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[68999,102697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[75137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015917"},{"annotations":[93699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[72185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[102954,102956,102955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001407"},{"annotations":[63966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[98987,97847,100891,97913,89585,106222,107892,108021,107115,104406,91260,109031,109905,101644,116633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[101722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[58937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[103220,58936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[70908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[107934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[93265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[104003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[76971,93700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[101646,74898,102576,90877,73233,90880,90881,72512,109891,90879,90874,90876,60066,90875,75156,90878,99832,90882,73393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[73569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[79571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[93470,112649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"},{"annotations":[88720,75369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[76365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[75496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[112765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[77970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[66614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of organophosphate esters into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organophosphate esters are small organic molecules containing phosphate ester bonds.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00154":null,"SJAG_00230":null,"SJAG_00232":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00612":null,"SJAG_00669":null,"SJAG_00760":null,"SJAG_00835":null,"SJAG_01095":null,"SJAG_01177":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03334":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04370":null,"SJAG_04406":null,"SJAG_04697":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_05325":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"organophosphate ester transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015748","terms_by_termid":{"GO:0001407":null,"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0015917":null,"GO:0017121":null,"GO:0035348":null,"GO:0035436":null,"GO:0036085":null,"GO:0045332":null,"GO:0072334":null,"GO:0097624":null,"GO:0120010":null,"GO:0120112":null,"GO:0140021":null,"GO:0140331":null,"GO:1903790":null,"GO:1990519":null,"GO:1990536":null,"GO:1990544":null,"GO:1990545":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null,"GO:1990569":null,"GO:1990570":null}}


id: PBO:0091334
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Z Homolog","termid":"PBO:0091334"}


id: PBO:0057864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3175","termid":"PBO:0057864"}


id: GO:0098516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which high humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of high humidity","termid":"GO:0098516"}


id: PBO:0079629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q1 antisense RNA 1","termid":"PBO:0079629"}


id: FYPO:0004042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms pieces of a septum rather than a septum that completely bisects the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"fragmented septum","synonyms":[{"name":"fragmented septum during mitotic cell cycle","type":"related"},{"name":"fragmented septum during vegetative growth","type":"exact"}],"termid":"FYPO:0004042"}


id: PATO:0001337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A yeast mating type.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yeast mating type","termid":"PATO:0001337"}


id: GO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unwinding, or local denaturation, of the DNA duplex to create a bubble around the site of the DNA damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA duplex unwinding (obsolete GO:0000717)","termid":"GO:0000717"}


id: PBO:0027611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_during_mitotic_G2_phase_resulting_in_complete_rereplication","termid":"PBO:0027611"}


id: SO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of extension of a tandem repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem","termid":"SO:0001513"}


id: MONDO:0017402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic ventricular dysplasia, biventricular form","secondary_identifiers":["DOID:0070535","MEDGEN:1864265","GARD:17346","Orphanet:293899","UMLS:C5925016"],"synonyms":[{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy, biventricular form","type":"exact"}],"termid":"MONDO:0017402","xrefs":{"Monarch":{"xref_id":"0017402"}}}


id: MONDO:0010767
data:
  {"annotated_genes":["SJAG_02035","SJAG_03635","SJAG_03286","SJAG_04663","SJAG_04324","SJAG_01465","SJAG_00786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86344,86345,86346,86347,86348,86349,86350],"is_not":false,"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"partial chromosome Y deletion","termid":"MONDO:0015607"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_01465":null,"SJAG_02035":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_04324":null,"SJAG_04663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, Y-linked, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070187","GARD:18504","MEDGEN:326394","MESH:C564030","OMIM:415000","UMLS:C1839071"],"synonyms":[{"name":"Azf regions","type":"related"},{"name":"SPGFY2","type":"related"},{"name":"azoospermia Factor regions","type":"related"},{"name":"azoospermia, nonobstructive, Y-linked","type":"related"},{"name":"oligospermia, nonobstructive, Y-linked","type":"related"},{"name":"oligozoospermia, nonobstructive, Y-linked","type":"related"},{"name":"spermatogenic arrest, Y-linked","type":"related"},{"name":"spermatogenic failure, Y-linked, 2","type":"exact"},{"name":"spermatogenic failure, Y-linked, 2, Y-linked","type":"exact"},{"name":"spermatogenic failure, Y-linked, type 2","type":"exact"},{"name":"spermatogenic failure, nonobstructive, Y-linked","type":"related"}],"termid":"MONDO:0010767","terms_by_termid":{"MONDO:0010767":null},"xrefs":{"Monarch":{"xref_id":"0010767"}}}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: FYPO:0006709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to salt stress","synonyms":[{"name":"abolished protein phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0006709"}


id: PBO:0078268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 4-1","termid":"PBO:0078268"}


id: PBO:0080461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 5","termid":"PBO:0080461"}


id: PBO:0083848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp42p (EXOSC7)","termid":"PBO:0083848"}


id: GO:0052419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of substance in symbiont (obsolete GO:0052419)","termid":"GO:0052419"}


id: MONDO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herpes zoster but without eruption of vesicles. Patients exhibit the characteristic pain minus the skin rash, sometimes making diagnosis difficult.","definition_xrefs":["MESH:D031368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes zoster","termid":"MONDO:0005609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"zoster sine herpete","secondary_identifiers":["SCTID:449783002","MEDGEN:253902","UMLS:C1135841"],"synonyms":[{"name":"Zoster sine Eruptione","type":"related"},{"name":"zoster sine herpete","type":"exact"}],"termid":"MONDO:0043988","xrefs":{"Monarch":{"xref_id":"0043988"}}}


id: PBO:0087428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo","termid":"PBO:0087428"}


id: GO:0044064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host respiratory system process (obsolete GO:0044064)","synonyms":[{"name":"regulation by symbiont of host respiratory system process","type":"exact"}],"termid":"GO:0044064"}


id: PR:G2TRN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.06 gene.","definition_xrefs":["UniProtKB:G2TRN3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein PB15E9.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.06","synonyms":[{"name":"Spom972h-SPAPB15E9.06","type":"exact"}],"termid":"PR:G2TRN3"}


id: PR:Q9Y7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18A7.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18A7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18A7.02c","synonyms":[{"name":"Spom972h-SPBC18A7.02c","type":"exact"}],"termid":"PR:Q9Y7Y9"}


id: PBO:0063669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 1","termid":"PBO:0063669"}


id: MONDO:0008877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blue Diaper syndrome is a hereditary metabolic disorder characterized by hypercalcaemia with nephrocalcinosis and indicanuria.","definition_xrefs":["Orphanet:94086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"blue diaper syndrome","secondary_identifiers":["UMLS:C0268478","icd11.foundation:292681007","GARD:5939","MEDGEN:75685","MESH:C536239","OMIM:211000","SCTID:59531002"],"synonyms":[{"name":"Drummond syndrome","type":"exact"},{"name":"blue diaper syndrome","type":"exact"},{"name":"familial hypercalcemia-nephrocalcinosis-indicanuria syndrome","type":"exact"},{"name":"hypercalcemia, familial, with nephrocalcinosis and indicanuria","type":"related"}],"termid":"MONDO:0008877","xrefs":{"Monarch":{"xref_id":"0008877"}}}


