# terms

id: PBO:0048969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase, mitochondrial","termid":"PBO:0048969"}


id: MONDO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma arising from the cerebral hemispheres.","definition_xrefs":["NCIT:C4826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"intracranial primitive neuroectodermal tumor","termid":"MONDO:0003142"},{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cerebral neuroblastoma","secondary_identifiers":["DOID:4164","DOID:0080905","SCTID:281560004","UMLS:C0559458","MEDGEN:107851"],"synonyms":[{"name":"central nervous system neuroblastoma","type":"exact"},{"name":"cerebral hemispheric neuroblastoma","type":"exact"},{"name":"cerebral neuroblastoma","type":"exact"},{"name":"cerebral neuroblastoma, PNET","type":"exact"},{"name":"neuroblastoma of brain","type":"exact"},{"name":"neuroblastoma of cerebral hemispheres","type":"exact"},{"name":"neuroblastoma of cerebrum","type":"exact"},{"name":"neuroblastoma of telencephalon","type":"exact"},{"name":"neuroblastoma of the cerebral hemisphere","type":"exact"},{"name":"neuroblastoma of the cerebral hemispheres","type":"exact"},{"name":"neuroblastoma of the cerebrum","type":"exact"},{"name":"telencephalon neuroblastoma","type":"exact"}],"termid":"MONDO:0002900","xrefs":{"Monarch":{"xref_id":"0002900"}}}


id: PR:Q10082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.03c","synonyms":[{"name":"Spom972h-SPAC11D3.03c","type":"exact"}],"termid":"PR:Q10082"}


id: GO:0090594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to wounding","termid":"GO:0090594"}


id: PBO:0034264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_role","termid":"PBO:0034264"}


id: GO:1902774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from late endosome to lysosome.","definition_xrefs":["GO_REF:0000076","PMID:23949442","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"late endosome to lysosome transport","synonyms":[{"name":"prevacuolar compartment to lysosome transport","type":"broad"}],"termid":"GO:1902774"}


id: MONDO:0957583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and behavioral abnormalities","secondary_identifiers":["OMIM:620489","MEDGEN:1852093","UMLS:C5882684","DOID:0070513"],"termid":"MONDO:0957583","xrefs":{"Monarch":{"xref_id":"0957583"}}}


id: PBO:0036464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, possibly DNA damage related nuclease (predicted)","termid":"PBO:0036464"}


id: PBO:0090439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec67","termid":"PBO:0090439"}


id: PBO:0089555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sfb3","termid":"PBO:0089555"}


id: GO:0005754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase, catalytic core (obsolete GO:0005754)","termid":"GO:0005754"}


id: GO:0032488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Cdc42 subfamily relays a signal.","definition_xrefs":["PMID:18558478","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Cdc42 protein signal transduction","synonyms":[{"name":"Cdc42 signaling","type":"related"},{"name":"Cdc42 signaling pathway","type":"related"},{"name":"cdc42 signalling pathway","type":"related"}],"termid":"GO:0032488"}


id: PBO:0090150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Man1, Sad1 interacting factor","termid":"PBO:0090150"}


id: PBO:0050929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 8 pseudogene","termid":"PBO:0050929"}


id: MONDO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cholera (obsolete MONDO:0002024)","termid":"MONDO:0002024","xrefs":{"Monarch":{"xref_id":"0002024"}}}


id: PBO:0004316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear rim protein Amo1","termid":"PBO:0004316"}


id: MONDO:0017710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital systemic veins anomaly (obsolete MONDO:0017710)","secondary_identifiers":["Orphanet:3091"],"termid":"MONDO:0017710","xrefs":{"Monarch":{"xref_id":"0017710"}}}


id: PBO:0040531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 1 pseudogene 1","termid":"PBO:0040531"}


id: PBO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal could be generated by overlap of UTRs","termid":"PBO:0000150"}


id: PBO:0003696
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at DNA damage sites, Sfr1-dependent","termid":"PBO:0003696"}


id: FYPO:0000134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell forms one or more branches near a septum, is elongated, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000005","FYPO:0000032","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"branched, elongated, multiseptate cell","synonyms":[{"name":"branched, elongated, multiseptate cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"branched, long, multiseptate cell","type":"exact"}],"termid":"FYPO:0000134"}


id: GO:1902573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["PMID:20179351","GOC:krc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of serine-type peptidase activity (obsolete GO:1902573)","synonyms":[{"name":"activation of serine protease activity","type":"narrow"},{"name":"activation of serine-type peptidase activity","type":"narrow"},{"name":"positive regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine-type peptidase activity","type":"exact"},{"name":"up-regulation of serine protease activity","type":"narrow"},{"name":"up-regulation of serine-type peptidase activity","type":"exact"},{"name":"upregulation of serine protease activity","type":"narrow"},{"name":"upregulation of serine-type peptidase activity","type":"exact"}],"termid":"GO:1902573"}


id: FYPO:0008322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 at one or more promoter regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0001442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation at promoter during vegetative growth","termid":"FYPO:0008322"}


id: GO:0102569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: FR-900098 + 2-oxoglutarate(2-) + O2 = FR-33289 + succinate(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete FR-33289 synthase activity (obsolete GO:0102569)","termid":"GO:0102569"}


id: PBO:0113152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; regulates chromatin structure, transcription, mRNA 3'-end formation and genome stability; role in chromatin remodeling and nucleosome assembly; required for initiation of DNA replication, promoting origin licensing through MCM helicase loading; required for fidelity of promoter selection through maintenance of chromatin structure during transcription; required for H3K36 trimethylation but not dimethylation by Set2p","termid":"PBO:0113152"}


id: MONDO:0020048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Internal carotid artery (ICA) agenesis (uni or bilateral) is a developmental defect that may be asymptomatic or lead to cerebrovascular lesions. It is a rare malformation, with only around hundred cases reported in the literature. When symptoms are present, they are caused by cerebrovascular insufficiency, compression of the brain by vessels that dilate to compensate for the absence of the ICA, or the presence of an aneurysm. Associated intracranial aneurysms occur in 25 to 35% of patients and are often responsible for intracranial hemorrhage, which may present as the initial symptom. The absence of the ICA is the result of either agenesis or aplasia. The term agenesis is used when both the ICA and its bony canal are absent, whereas there is some evidence of carotid canals in cases of aplasia. The absence of the ICA can be detected by angiography or by computerized tomography.","definition_xrefs":["Orphanet:981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid agenesis","secondary_identifiers":["icd11.foundation:368564890","MEDGEN:928576","GARD:3012","SCTID:722004001","UMLS:C4302907"],"synonyms":[{"name":"agenesis of the internal carotid artery","type":"related"},{"name":"internal carotid artery agenesis","type":"related"}],"termid":"MONDO:0020048","xrefs":{"Monarch":{"xref_id":"0020048"}}}


id: MONDO:0021739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A name applied to several itchy skin eruptions of unknown cause. The characteristic course is the formation of a dome-shaped papule with a small transient vesicle on top, followed by crusting over or lichenification. (From Dorland, 27th ed)","definition_xrefs":["MESH:D011536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"prurigo","secondary_identifiers":["ICD9:698.2","ICD9:698.8","SCTID:64144002","UMLS:C0033771","icd11.foundation:268810206","MEDGEN:10986"],"synonyms":[{"name":"Itchy skin eruption","type":"related"},{"name":"Prurigo","type":"related"},{"name":"Pruritic rash","type":"related"},{"name":"itchy skin eruption","type":"related"},{"name":"prurigo","type":"exact"},{"name":"pruritic rash","type":"exact"}],"termid":"MONDO:0021739","xrefs":{"Monarch":{"xref_id":"0021739"}}}


id: PR:Q9C110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug177 gene.","definition_xrefs":["UniProtKB:Q9C110","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 177 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.15","synonyms":[{"name":"Spom972h-mug177","type":"exact"}],"termid":"PR:Q9C110"}


id: PBO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim8 (predicted)","termid":"PBO:0000180"}


id: GO:0008021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.","definition_xrefs":["PMID:10099709","PMID:12563290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle","termid":"GO:0070382"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle","secondary_identifiers":["Wikipedia:Synaptic_vesicle","NIF_Subcellular:sao1071221672"],"synonyms":[{"name":"docked vesicle","type":"narrow"}],"termid":"GO:0008021"}


id: GO:0046231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete carbazole biosynthetic process (obsolete GO:0046231)","synonyms":[{"name":"carbazole anabolism","type":"exact"},{"name":"carbazole biosynthesis","type":"exact"},{"name":"carbazole biosynthetic process","type":"exact"},{"name":"carbazole formation","type":"exact"},{"name":"carbazole synthesis","type":"exact"}],"termid":"GO:0046231"}


id: PBO:0005338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPcyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0005338"}


id: GO:0004312
data:
  {"annotated_genes":["SJAG_04107","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58567,59943],"is_not":false,"summary":null,"term":"GO:0004312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADPH + 2n H+ = long-chain fatty acid + n+1 CoA + n CO2 + 2n NADP+.","definition_xrefs":["EC:2.3.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"fatty acid synthase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["RHEA:14993","MetaCyc:FATTY-ACID-SYNTHASE-RXN","Reactome:R-HSA-163756","Reactome:R-HSA-75872"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing and thioester-hydrolysing)","type":"related"},{"name":"fatty-acid synthase activity","type":"exact"}],"termid":"GO:0004312","terms_by_termid":{"GO:0004312":null}}


id: PR:Q9UTC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13303:SF0","OMA:SCHPO00201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: PBO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 1","termid":"PBO:0061061"}


id: PBO:0027162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027162"}


id: PBO:0075534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E14","termid":"PBO:0075534"}


id: PBO:0027770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_recombination_frequency","termid":"PBO:0027770"}


id: MONDO:0011730
data:
  {"annotated_genes":["SJAG_04843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85789],"is_not":false,"summary":null,"term":"MONDO:0011730"}]},"cv_name":"mondo","definition":"Fumaric aciduria (FA), an autosomal recessive metabolic disorder, is most often characterized by early onset but non-specific clinical signs: hypotonia, severe psychomotor impairment, convulsions, respiratory distress, feeding difficulties and frequent cerebral malformations, along with a distinctive facies. Some patients present with only moderate intellectual impairment.","definition_xrefs":["Orphanet:24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"tricarboxylic acid cycle disorder","termid":"MONDO:0016790"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"fumaric aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:282.3","NANDO:2200520","MESH:C538191","OMIM:606812","DOID:0111261","SCTID:237983002","MEDGEN:87458","GARD:6476","UMLS:C0342770"],"synonyms":[{"name":"FMRD","type":"related"},{"name":"fumarase deficiency","type":"exact"},{"name":"fumarate hydratase deficiency","type":"related"},{"name":"fumaric aciduria","type":"exact"}],"termid":"MONDO:0011730","terms_by_termid":{"MONDO:0011730":null},"xrefs":{"Monarch":{"xref_id":"0011730"}}}


id: PR:O60060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbamoyl-phosphate synthase small chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03990","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase arginine-specific small chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.09c","secondary_identifiers":["UniProtKB:O60060"],"synonyms":[{"name":"CPS-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-carA","type":"exact"},{"name":"arginine-specific carbamoyl-phosphate synthetase, glutamine chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60060"}


id: PBO:0045719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4","termid":"PBO:0045719"}


id: GO:0098709
data:
  {"annotated_genes":["SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95885],"is_not":false,"summary":null,"term":"GO:0098709"}]},"cv_name":"biological_process","definition":"The directed movement of glutathione from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transmembrane transport","termid":"GO:0034775"},{"relation_name":"is_a","term_name":"tripeptide import across plasma membrane","termid":"GO:0140207"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glutathione import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0036347"],"synonyms":[{"name":"glutathione import into cell","type":"exact"},{"name":"glutathione uptake","type":"exact"}],"termid":"GO:0098709","terms_by_termid":{"GO:0098709":null}}


id: MONDO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cessation of menstruation before the age of 40. Symptoms include hot flashes, night sweats, mood swings, and decreased sex drive.","definition_xrefs":["NCIT:C80099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian failure","termid":"MONDO:0005387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature menopause","secondary_identifiers":["MESH:D008594","DOID:10787","SCTID:237788002","EFO:0009005","ICD9:256.31","MEDGEN:9963","ICD9:256.39","UMLS:C0025322"],"synonyms":[{"name":"POF","type":"exact"},{"name":"early menopause","type":"exact"},{"name":"menopause - premature","type":"exact"},{"name":"menopause praecox","type":"exact"},{"name":"premature menopause","type":"exact"},{"name":"premature ovarian failure","type":"exact"}],"termid":"MONDO:0001119","xrefs":{"Monarch":{"xref_id":"0001119"}}}


id: PBO:0040179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase","termid":"PBO:0040179"}


id: FYPO:0006761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription during cellular response to hydroxyurea","synonyms":[{"name":"increased transcription during cellular response to HU","type":"exact"},{"name":"increased transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased transcription in response to HU","type":"exact"},{"name":"increased transcription in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006761"}


id: PBO:0044555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 1","termid":"PBO:0044555"}


id: PBO:0077277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14E, pseudogene","termid":"PBO:0077277"}


id: PBO:0065394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 2","termid":"PBO:0065394"}


id: GO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:hjd","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenic-containing substance","synonyms":[{"name":"arsenate sensitivity/resistance","type":"related"},{"name":"response to arsenic","type":"exact"}],"termid":"GO:0046685"}


id: MONDO:0008886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sabinas brittle hair syndrome","secondary_identifiers":["OMIM:211390","MESH:C536320","UMLS:C0796271","icd11.foundation:1722502589","MEDGEN:163238","DOID:0111874","Orphanet:3123"],"synonyms":[{"name":"Sabinas brittle hair syndrome","type":"exact"},{"name":"Sabinas syndrome","type":"related"},{"name":"brittle hair and mental Deficit","type":"related"},{"name":"brittle hair syndrome, Sabinas type","type":"exact"}],"termid":"MONDO:0008886","xrefs":{"Monarch":{"xref_id":"0008886"}}}


id: PBO:0030147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_vegetative_growth","termid":"PBO:0030147"}


id: GO:0050562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tRNA(Pyl) + L-lysine + ATP = L-lysyl-tRNA(Pyl) + diphosphate + AMP.","definition_xrefs":["MetaCyc:6.1.1.25-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete lysine-tRNA(Pyl) ligase activity (obsolete GO:0050562)","synonyms":[{"name":"L-lysine:tRNAPyl ligase (AMP-forming)","type":"exact"},{"name":"lysine-tRNAPyl ligase activity","type":"exact"}],"termid":"GO:0050562"}


id: GO:0140926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-kynurenine from one side of a membrane to the other.","definition_xrefs":["PMID:35245456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-kynurenine transmembrane transporter activity","termid":"GO:0140926"}


id: MONDO:0002978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises in the orbit. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbit rhabdomyosarcoma","termid":"MONDO:0002580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit alveolar rhabdomyosarcoma","secondary_identifiers":["UMLS:C1335126","DOID:4384","MEDGEN:235408","NCIT:C6247"],"synonyms":[{"name":"alveolar rhabdomyosarcoma of orbit","type":"exact"},{"name":"alveolar rhabdomyosarcoma of the orbit","type":"exact"}],"termid":"MONDO:0002978","xrefs":{"Monarch":{"xref_id":"0002978"}}}


id: PBO:0044901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derlin 3","termid":"PBO:0044901"}


id: RO:0002615
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of is-model-of","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_model","termid":"RO:0002615"}


id: GO:0097430
data:
  {"annotated_genes":["SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101847],"is_not":false,"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions from outside of a cell, across an ascospore-type prospore membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMID:21828039","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03079":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"copper ion import across prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"related"},{"name":"copper ion transport into forespores","type":"related"}],"termid":"GO:0097430","terms_by_termid":{"GO:0097430":null}}


id: MONDO:0008193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian-pyramidal syndrome","termid":"MONDO:0009830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralysis agitans, juvenile, of Hunt","secondary_identifiers":["ICD9:333.0","OMIM:168100","GARD:10359","MESH:C562469","MEDGEN:66768","SCTID:43647007","UMLS:C0238344"],"synonyms":[{"name":"Parkinson disease, juvenile, of Hunt","type":"related"},{"name":"paralysis agitans, juvenile, of Hunt","type":"exact"}],"termid":"MONDO:0008193","xrefs":{"Monarch":{"xref_id":"0008193"}}}


id: MONDO:0008895
data:
  {"annotated_genes":["SJAG_02582","SJAG_02580","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87286,87287,87288],"is_not":false,"summary":null,"term":"MONDO:0008895"}]},"cv_name":"mondo","definition":"Hereditary arterial and articular multiple calcification syndrome is a very rare genetic vascular disease of autosomal recessive inheritance, described in less than 20 patients to date, characterized by adult-onset (as early as the second decade of life) isolated calcification of the arteries of the lower extremities (including the iliac, femoral, and tibial arteries) as well as the capsule joints of the fingers, wrists, ankles and feet, and that usually manifests with mild paresthesias of the lower extremities, intense joint pain and swelling, and early onset arthritis of affected joints.","definition_xrefs":["Orphanet:289601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary arterial and articular multiple calcification syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565891","MEDGEN:347132","GARD:10762","SCTID:718602007","DOID:0111582","OMIM:211800","UMLS:C1859372"],"synonyms":[{"name":"ACDC","type":"related"},{"name":"CALJA","type":"exact"},{"name":"arterial calcification and distal joint calcification","type":"related"},{"name":"arterial calcification due to CD73 deficiency","type":"related"},{"name":"arterial calcification due to deficiency of Cd73","type":"related"},{"name":"calcification of joints and arteries","type":"exact"}],"termid":"MONDO:0008895","terms_by_termid":{"MONDO:0008895":null},"xrefs":{"Monarch":{"xref_id":"0008895"}}}


id: MONDO:0009354
data:
  {"annotated_genes":["SJAG_04042","SJAG_04459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85611,85612],"is_not":false,"summary":null,"term":"MONDO:0009354"}]},"cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the MTRR gene, encoding methionine synthase reductase. It is characterized by homocystinuria and megaloblastic anemia.","definition_xrefs":["NCIT:C142173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"homocystinuria without methylmalonic aciduria","termid":"MONDO:0018964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005570","MONDO:0005066","MONDO:0002280","MONDO:0004736"],"is_obsolete":false,"name":"methylcobalamin deficiency type cblE","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565510","DOID:0050732","DOID:0112255","GARD:3576","MEDGEN:344640","OMIM:236270","NANDO:2201109","Orphanet:2169","UMLS:C1856057"],"synonyms":[{"name":"HMAE","type":"related"},{"name":"functional methionine synthase deficiency type cblE","type":"exact"},{"name":"homocystinuria due to defect in methylation Cbl e","type":"related"},{"name":"homocystinuria-megaloblastic Anaemia due to defect in cobalamin metabolism, cblE complementation type","type":"related"},{"name":"homocystinuria-megaloblastic Anemia due to defect in cobalamin metabolism, cblE complementation type","type":"related"},{"name":"homocystinuria-megaloblastic anemia, cbl e type","type":"exact"},{"name":"homocystinuria-megaloblastic anemia, cblE complementation type","type":"related"},{"name":"methylcobalamin deficiency type cblE","type":"exact"},{"name":"methylcobalamin deficiency, cblE type","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblE","type":"related"},{"name":"vitamin B12-responsive homocystinuria, cblE type","type":"related"}],"termid":"MONDO:0009354","terms_by_termid":{"MONDO:0009354":null},"xrefs":{"Monarch":{"xref_id":"0009354"}}}


id: PBO:0003386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf11","termid":"PBO:0003386"}


id: GO:1901490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:TermGenie","PMID:20133819","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphangiogenesis","synonyms":[{"name":"regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901490"}


id: PBO:0060514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor attachment protein, gamma pseudogene 2","termid":"PBO:0060514"}


id: PBO:0089140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp2","termid":"PBO:0089140"}


id: GO:0047616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = 2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:ACYL-COA-DEHYDROGENASE-NADP+-RXN","RHEA:22460"],"synonyms":[{"name":"2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"crotonyl coenzyme A reductase activity","type":"related"},{"name":"dehydrogenase, acyl coenzyme A (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"enoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0047616"}


id: GO:0032618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-15 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-15 production","secondary_identifiers":["GO:0072613","GO:0042233"],"synonyms":[{"name":"IL-15 production","type":"exact"},{"name":"interleukin-15 biosynthetic process","type":"narrow"},{"name":"interleukin-15 secretion","type":"narrow"}],"termid":"GO:0032618"}


id: MONDO:0009693
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87687],"is_not":false,"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C3242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"plasma cell myeloma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10122","UMLS:C0026764","ICD9:203.0","Orphanet:29073","icd11.foundation:1582389689","DOID:9538","OMIM:254500","EFO:0001378","ONCOTREE:PCM","MESH:D009101","icd11.foundation:526287100","MedDRA:10028228","ICDO:9732/3","GARD:7108","ICD10CM:C90.0"],"synonyms":[{"name":"Al amyloidosis","type":"related"},{"name":"Kahler disease","type":"exact"},{"name":"Kahler's disease","type":"exact"},{"name":"Multiple Myeloma","type":"exact"},{"name":"amyloidosis, systemic","type":"related"},{"name":"medullary plasmacytoma","type":"exact"},{"name":"multiple myeloma","type":"exact"},{"name":"multiple myeloma, resistance to, Somatic mutation","type":"exact"},{"name":"multiple myeloma, susceptibility to, Somatic mutation","type":"exact"},{"name":"multiple myeloma/plasma cell myeloma","type":"exact"},{"name":"myeloid neoplasm of plasma cell","type":"exact"},{"name":"myeloma","type":"exact"},{"name":"myeloma - multiple","type":"related"},{"name":"myeloma, multiple","type":"exact"},{"name":"myeloma, plasma cell, malignant","type":"exact"},{"name":"myelomatosis","type":"exact"},{"name":"plasma cell myeloid neoplasm","type":"exact"},{"name":"plasma cell myeloma","type":"exact"}],"termid":"MONDO:0009693","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0009693"}}}


id: MONDO:0013888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any essential tremor in which the cause of the disease is a mutation in the FUS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 4","secondary_identifiers":["OMIM:614782","MEDGEN:761337","DOID:0111431","UMLS:C3539195"],"synonyms":[{"name":"ETM4","type":"related"},{"name":"FUS essential tremor","type":"exact"},{"name":"essential tremor caused by mutation in FUS","type":"exact"},{"name":"essential tremor, hereditary, 4","type":"exact"},{"name":"tremor, hereditary essential, 4","type":"exact"},{"name":"tremor, hereditary essential, type 4","type":"exact"}],"termid":"MONDO:0013888","xrefs":{"Monarch":{"xref_id":"0013888"}}}


id: MONDO:1010863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis, non-human animal","termid":"MONDO:1010172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidosis, domestic guinea pig","secondary_identifiers":["OMIA:000625-10141"],"termid":"MONDO:1010863","xrefs":{"Monarch":{"xref_id":"1010863"}}}


id: PBO:0005111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin","termid":"PBO:0005111"}


id: GO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response by cell wall thickening","termid":"GO:0052482"},{"relation_name":"is_a","term_name":"defense response by callose deposition","termid":"GO:0052542"},{"relation_name":"is_a","term_name":"callose deposition in cell wall","termid":"GO:0052543"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"defense response by callose deposition in cell wall","synonyms":[{"name":"callose deposition in cell wall during defense response","type":"related"},{"name":"callose localization in cell wall during defense response","type":"exact"},{"name":"cell wall callose deposition during defense response","type":"exact"},{"name":"cell wall callose localization during defense response","type":"exact"}],"termid":"GO:0052544"}


id: FYPO:0009031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bleomycin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to bleomycin","synonyms":[{"name":"resistance to bleomycin during mitotic cell cycle","type":"related"},{"name":"resistance to bleomycin during vegetative growth","type":"exact"},{"name":"resistant to bleomycin","type":"exact"}],"termid":"FYPO:0009031"}


id: MONDO:0016547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to NSD1 mutation","secondary_identifiers":["GARD:17178","UMLS:C5680933","MEDGEN:1825953","Orphanet:238613"],"termid":"MONDO:0016547","xrefs":{"Monarch":{"xref_id":"0016547"}}}


id: PR:Q9P7F9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: PBO:0027022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_punctate_nuclear_protein_localization","termid":"PBO:0027022"}


id: PBO:0071402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 8","termid":"PBO:0071402"}


id: MONDO:0054695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"centronuclear myopathy","termid":"MONDO:0018947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, centronuclear, 6, with fiber-type disproportion","secondary_identifiers":["DOID:0111221","OMIM:617760","UMLS:C4540345","GARD:16250","MEDGEN:1627492"],"synonyms":[{"name":"CNM6","type":"related"},{"name":"centronuclear myopathy 6 with fiber-type disproportion","type":"exact"},{"name":"myopathy, centronuclear, 6, with FIBER-type disproportion","type":"related"},{"name":"myopathy, centronuclear, 6, with fiber-type disproportion","type":"exact"}],"termid":"MONDO:0054695","xrefs":{"Monarch":{"xref_id":"0054695"}}}


id: GO:0019792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete APG12 hydrolase activity (obsolete GO:0019792)","synonyms":[{"name":"APG12 hydrolase activity","type":"exact"}],"termid":"GO:0019792"}


id: MONDO:0006891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A simple partial seizure consisting of clonus or spasm of a muscle or muscle group; it may be single or in a continuous and repetitive series or may spread to adjacent muscles.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"partial motor epilepsy","secondary_identifiers":["SCTID:128612007","EFO:1001089","ICD9:780.39","UMLS:C0016399","DOID:3327","MEDGEN:5237","MESH:D020938"],"synonyms":[{"name":"epilepsy, focal motor","type":"exact"},{"name":"focal motor seizure","type":"exact"}],"termid":"MONDO:0006891","xrefs":{"Monarch":{"xref_id":"0006891"}}}


id: GO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal dipeptide, Xaa-Xbb from Xaa-Xbb-Xcc, except when Xaa is Arg or Lys, or Xbb or Xcc is Pro.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase I activity (obsolete GO:0004214)","synonyms":[{"name":"dipeptidyl-peptidase I activity","type":"exact"}],"termid":"GO:0004214"}


id: PBO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9","termid":"PBO:0052232"}


id: GO:0010008
data:
  {"annotated_genes":["SJAG_04822","SJAG_02587","SJAG_04513","SJAG_03347","SJAG_00638","SJAG_01242","SJAG_03511","SJAG_00108","SJAG_00314","SJAG_04489","SJAG_03783","SJAG_01379","SJAG_04023","SJAG_01236","SJAG_00416","SJAG_03250","SJAG_05207","SJAG_00301","SJAG_00299","SJAG_03892","SJAG_01981","SJAG_04024","SJAG_04936","SJAG_02100","SJAG_02429","SJAG_04349","SJAG_05210","SJAG_01112","SJAG_00900","SJAG_04912","SJAG_07012"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60922,72971,78475,80617,99042,102328,102340],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[90932],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[100072,80722,96254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[88470,72704],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[72563,78816,71391],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[71480,70421,76117,76658,78076,71161],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[76525,88471,92359,101441,78814,99869,98019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[62575,119605,60550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[75621,99223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00416":null,"SJAG_00638":null,"SJAG_00900":null,"SJAG_01112":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01379":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03511":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao978443756"],"synonyms":[{"name":"endosomal membrane","type":"exact"}],"termid":"GO:0010008","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: GO:0018194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-alanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-alanine modification","termid":"GO:0018194"}


id: PR:Q9P7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.06","synonyms":[{"name":"Spom972h-SPCC24B10.06","type":"exact"}],"termid":"PR:Q9P7J9"}


id: PBO:0028410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cadmium_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028410"}


id: PBO:0076909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 1","termid":"PBO:0076909"}


id: PBO:0084494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Mei5p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084494"}


id: PBO:0017682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Pdr1","termid":"PBO:0017682"}


id: GO:0140654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tryprostatin A.","definition_xrefs":["PMID:19226505","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tryprostatin A biosynthetic process","synonyms":[{"name":"tryprostatin A anabolism","type":"exact"},{"name":"tryprostatin A biosynthesis","type":"exact"},{"name":"tryprostatin A formation","type":"exact"},{"name":"tryprostatin A synthesis","type":"exact"}],"termid":"GO:0140654"}


id: PBO:0052276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM5C intronic transcript 1","termid":"PBO:0052276"}


id: MONDO:0003651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pure fetal or fetal and embryonal epithelial hepatoblastoma characterized by the presence of broad trabeculae.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatoblastoma","termid":"MONDO:0018666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"macrotrabecular hepatoblastoma","secondary_identifiers":["DOID:5798","MEDGEN:233654","NCIT:C7095","UMLS:C1334543"],"termid":"MONDO:0003651","xrefs":{"Monarch":{"xref_id":"0003651"}}}


id: GO:1900537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glucose homeostasis (obsolete GO:1900537)","synonyms":[{"name":"down regulation of glucose homeostasis","type":"exact"},{"name":"down-regulation of glucose homeostasis","type":"exact"},{"name":"downregulation of glucose homeostasis","type":"exact"},{"name":"inhibition of glucose homeostasis","type":"narrow"},{"name":"negative regulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900537"}


id: PBO:0054253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1637","termid":"PBO:0054253"}


id: GO:1905296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["PMID:15073157","GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of neural crest formation","termid":"GO:0090301"},{"relation_name":"is_a","term_name":"negative regulation of neural crest cell differentiation","termid":"GO:1905293"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"negatively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest cell fate specification","synonyms":[{"name":"down regulation of neural crest cell fate specification","type":"exact"},{"name":"down-regulation of neural crest cell fate specification","type":"exact"},{"name":"downregulation of neural crest cell fate specification","type":"exact"},{"name":"inhibition of neural crest cell fate specification","type":"narrow"}],"termid":"GO:1905296"}


id: MONDO:0006212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of hyperplasia that is characterized by a marked thickening of the urinary tract epithelium. There is no evidence of cytologic atypia. -- 2003","definition_xrefs":["NCIT:C27878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urothelial hyperplasia","termid":"MONDO:0024483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flat urothelial hyperplasia","secondary_identifiers":["EFO:1000259","MEDGEN:272633","UMLS:C1333621"],"synonyms":[{"name":"flat urothelial hyperplasia","type":"exact"}],"termid":"MONDO:0006212","xrefs":{"Monarch":{"xref_id":"0006212"}}}


id: PR:Q53EK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A non-structural maintenance of chromosomes element 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20973:SF0","OMA:SCHPO04590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosomes element 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.05","secondary_identifiers":["UniProtKB:Q53EK2"],"synonyms":[{"name":"Spom972h-NSMCE1","type":"exact"},{"name":"non-SMC element 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q53EK2"}


id: PR:O43002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec61 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13509:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec61 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.03c","secondary_identifiers":["UniProtKB:O43002"],"synonyms":[{"name":"SPBC2G2.03c","type":"related"},{"name":"Spom972h-SEC61B","type":"exact"}],"termid":"PR:O43002"}


id: GO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17005992","PMID:10850718","PMID:9427760"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035955)","synonyms":[{"name":"negative regulation of dipeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of dipeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035955"}


id: GO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a maltose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to maltose stimulus","termid":"GO:0071328"}


id: CHEBI:34653
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Congo Red","termid":"CHEBI:34653"}


id: GO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of competence for transformation","synonyms":[{"name":"down regulation of establishment of competence for transformation","type":"exact"},{"name":"down-regulation of establishment of competence for transformation","type":"exact"},{"name":"downregulation of establishment of competence for transformation","type":"exact"},{"name":"inhibition of establishment of competence for transformation","type":"narrow"},{"name":"inhibitor of the establishment of competence for transformation activity","type":"related"}],"termid":"GO:0045808"}


id: RO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between materal entities a and b if the activity of a is causally upstream of the activity of b, or causally upstream of a an activity that modifies b","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influences","termid":"RO:0002566"}


id: GO:0090673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:BHF_miRNA","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}


id: MOD:01898
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:21568297","PubMed:21950656","RESID:AA0569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N2,N2-dimethyl-L-arginine","synonyms":[{"name":"(2S)-5-[(diaminomethylidene)amino]-2-(dimethylamino)pentanoic acid","type":"exact"},{"name":"(2S)-5-carbamimidamido-2-(dimethylamino)pentanoic acid [tautomer]","type":"exact"},{"name":"MOD_RES N2,N2-dimethylarginine","type":"exact"},{"name":"N(alpha),N(alpha)-dimethylarginine","type":"exact"},{"name":"N2,N2-dimethyl-L-arginine","type":"exact"},{"name":"N2,N2-dimethylarginine","type":"exact"}],"termid":"MOD:01898"}


id: PBO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 5","termid":"PBO:0051759"}


id: PBO:0026950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vorinostat","termid":"PBO:0026950"}


id: MONDO:0008198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parietal foramina with clavicular hypoplasia is a rare genetic bone development disorder characterized by parietal foramina in association with hypoplasia of the clavicles (short abnormal clavicles with tapering lateral ends, with or without loss of the acromion). Additional features may include mild craniofacial dysmorphism (macrocephaly, broad forehead and frontal bossing). No dental abnormalities were reported.","definition_xrefs":["Orphanet:251290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parietal foramina with cleidocranial dysplasia","secondary_identifiers":["MEDGEN:401479","GARD:17207","OMIM:168550","MESH:C566825","UMLS:C1868597"],"synonyms":[{"name":"PFMCCD","type":"related"},{"name":"cleidocranial dysplasia with parietal foramina","type":"related"},{"name":"parietal foramina with clavicular hypoplasia","type":"related"},{"name":"parietal foramina with cleidocranial dysostosis","type":"exact"},{"name":"parietal foramina with cleidocranial dysplasia","type":"exact"}],"termid":"MONDO:0008198","xrefs":{"Monarch":{"xref_id":"0008198"}}}


id: GO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube morphogenesis","termid":"GO:0060562"}


id: PBO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC27 antisense RNA 1","termid":"PBO:0045248"}


id: PBO:0071322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 6","termid":"PBO:0071322"}


id: PBO:0082125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid trehalase required for utilization of extracellular trehalose; involved in intracellular trehalose degradation during growth recovery after saline stress","termid":"PBO:0082125"}


id: PBO:0072597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"round spermatid basic protein 1 like","termid":"PBO:0072597"}


id: GO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of odorants, any substance capable of stimulating the sense of smell, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete odorant transporter activity (obsolete GO:0043563)","termid":"GO:0043563"}


id: FYPO:0006034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, morphology, or other physical characteristic of the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrion","synonyms":[{"name":"normal mitochondria","type":"exact"},{"name":"normal mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0006034"}


id: MONDO:0006183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign process that affects the peritoneal cavity and is characterized by the formation of multiple small nodules that are composed of well differentiated smooth muscle. It usually affects adults in their late reproductive years. Most patients are asymptomatic. The tumor nodules may regress spontaneously.","definition_xrefs":["NCIT:C3958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"},{"relation_name":"is_a","term_name":"leiomyomatosis","termid":"MONDO:0003295"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disseminated peritoneal leiomyomatosis","secondary_identifiers":["DOID:5728","UMLS:C0267785","GARD:12843","Orphanet:71274","SCTID:62557001","MEDGEN:78634","EFO:1000220"],"synonyms":[{"name":"DPL","type":"exact"},{"name":"LPD","type":"exact"},{"name":"diffuse peritoneal leiomyomatosis","type":"exact"},{"name":"disseminated peritoneal leiomyomatosis","type":"exact"},{"name":"leiomyomatosis peritonealis disseminata","type":"exact"},{"name":"leiomyomatosis peritonealis disseminate","type":"exact"}],"termid":"MONDO:0006183","xrefs":{"Monarch":{"xref_id":"0006183"}}}


id: PBO:0035974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acetaldehyde","termid":"PBO:0035974"}


id: GO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung-associated mesenchyme from an initial condition to its mature state. This process begins with the formation of lung-associated mesenchyme and ends with the mature structure. Lung-associated mesenchyme is the tissue made up of loosely connected mesenchymal cells in the lung.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung-associated mesenchyme development","synonyms":[{"name":"lung mesenchyme development","type":"exact"},{"name":"pulmonary mesenchyme development","type":"exact"}],"termid":"GO:0060484"}


id: MONDO:0010244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGF1","secondary_identifiers":["MEDGEN:338395","OMIM:300082","UMLS:C1848140"],"synonyms":[{"name":"CGF1","type":"exact"},{"name":"cognitive function 1, social","type":"exact"},{"name":"social cognition","type":"exact"}],"termid":"MONDO:0010244","xrefs":{"Monarch":{"xref_id":"0010244"}}}


id: MONDO:0030991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid conjugation defect 1","secondary_identifiers":["OMIM:619232","UMLS:C5543203","MEDGEN:1780260"],"synonyms":[{"name":"BACD1","type":"exact"}],"termid":"MONDO:0030991","xrefs":{"Monarch":{"xref_id":"0030991"}}}


id: MONDO:0023083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epimetaphyseal dysplasia cataract","termid":"MONDO:0023083","xrefs":{"Monarch":{"xref_id":"0023083"}}}


id: GO:0140965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional secondary piRNA, involving a self-perpetuating piRNA loop, often called the ping-pong cycle, in which piRNAs are amplified by pairing with complementary transcripts (for example the transposable element mRNA target). In Drosophila, the processing involves the piwi proteins aubergine and Argonaute 3 and in mice, the piwi proteins Piwil2 and Piwil4.","definition_xrefs":["PMID:29281264","PMID:32895365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA processing","termid":"GO:0034587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"secondary piRNA processing","synonyms":[{"name":"ping-pong amplification","type":"related"},{"name":"ping-pong derived piRNA","type":"exact"},{"name":"secondary PIWI-associated RNA processing","type":"exact"},{"name":"secondary piRNA biogenesis","type":"exact"}],"termid":"GO:0140965"}


id: GO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}


id: PR:Q09735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosol aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00229","PRO:DNx","PANTHER:PTHR11963:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase C13A11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.05","secondary_identifiers":["UniProtKB:Q09735"],"synonyms":[{"name":"Spom972h-LAP3","type":"exact"}],"termid":"PR:Q09735"}


id: MONDO:0859520
data:
  {"annotated_genes":["SJAG_03322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86939],"is_not":false,"summary":null,"term":"MONDO:0859520"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03322":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex IV deficiency, nuclear type 23","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830322","OMIM:620275","MEDGEN:1840958","DOID:0070485"],"termid":"MONDO:0859520","terms_by_termid":{"MONDO:0859520":null},"xrefs":{"Monarch":{"xref_id":"0859520"}}}


id: PBO:0077567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 273","termid":"PBO:0077567"}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: GO:0016401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + O2 = trans-2,3-dehydropalmitoyl-CoA + hydrogen peroxide.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"palmitoyl-CoA oxidase activity","termid":"GO:0016401"}


id: GO:0140862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-119 residue.","definition_xrefs":["PMID:25470042","PMID:28624371","PMID:22844243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0019787","GO:0016746","GO:0003674","GO:0004842","GO:0016740"],"is_obsolete":false,"name":"histone H2AK119 ubiquitin ligase activity","synonyms":[{"name":"histone H2A-K119 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2A-K119 specific)","type":"exact"}],"termid":"GO:0140862"}


id: FYPO:0004570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic sister chromatid separation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic sister chromatid separation","synonyms":[{"name":"decreased chromosome separation during meiosis II","type":"exact"},{"name":"reduced meiotic sister chromatid separation","type":"exact"}],"termid":"FYPO:0004570"}


id: GO:0071675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mononuclear cell migration","termid":"GO:0071675"}


id: MONDO:0011990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign neonatal seizures","termid":"MONDO:0016027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial neonatal, 3","secondary_identifiers":["MESH:C564274","GARD:15427","MEDGEN:334063","OMIM:608217","UMLS:C1842382"],"synonyms":[{"name":"BFNS3","type":"exact"},{"name":"convulsions, benign familial neonatal, 3","type":"related"},{"name":"seizures, benign familial neonatal, 3","type":"exact"}],"termid":"MONDO:0011990","xrefs":{"Monarch":{"xref_id":"0011990"}}}


id: PBO:0078878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 1","termid":"PBO:0078878"}


id: GO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ascorbate from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-198870"],"synonyms":[{"name":"L-ascorbate transporter activity","type":"exact"},{"name":"vitamin C transporter activity","type":"exact"}],"termid":"GO:0015229"}


id: PBO:0032698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_during_cellular_response_to_hydroxyurea","termid":"PBO:0032698"}


id: PBO:0081209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 1","termid":"PBO:0081209"}


id: PBO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 2","termid":"PBO:0044162"}


id: PR:Q10081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ElaA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00033","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0039 protein C11D3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.02c","secondary_identifiers":["UniProtKB:Q10081"],"synonyms":[{"name":"Spom972h-elaA","type":"exact"}],"termid":"PR:Q10081"}


id: FYPO:0006872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased histone H2A phosphorylation during cellular response to IR","type":"exact"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006872"}


id: GO:0080003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the triterpene thalianol.","definition_xrefs":["PMID:18356490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"thalianol metabolic process","synonyms":[{"name":"thalianol metabolism","type":"exact"}],"termid":"GO:0080003"}


id: GO:0021987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pallium development","termid":"GO:0021543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex development","synonyms":[{"name":"corticogenesis","type":"narrow"},{"name":"neocortex development","type":"related"}],"termid":"GO:0021987"}


id: MONDO:0850149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney benign neoplasm that is located in the kidney cortex.","definition_xrefs":["DOID:0080615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephroma","termid":"MONDO:0850149","xrefs":{"Monarch":{"xref_id":"0850149"}}}


id: GO:0062094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomach over time, from its formation to the mature structure. The stomach is an expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ.","definition_xrefs":["PMID:11967278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach development","termid":"GO:0062094"}


id: GO:1990251
data:
  {"annotated_genes":["SJAG_04601","SJAG_04006","SJAG_04768","SJAG_03745","SJAG_02720","SJAG_00961","SJAG_01867","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87841,92219,92596,93802,104658,107820,111684,118503],"is_not":false,"summary":null,"term":"GO:1990251"}]},"cv_name":"cellular_component","definition":"An nuclear body involved in nuclear mRNA surveilllance. Contains at least Mmi1, or an ortholog of it, and the nuclear exosome.","definition_xrefs":["PMID:23980030","GOC:vw","GOC:al","PMID:32012158","PMID:16823445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00961":null,"SJAG_01867":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04601":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"nuclear exosome focus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mmi1 nuclear focus","type":"exact"},{"name":"nuclear body","type":"related"}],"termid":"GO:1990251","terms_by_termid":{"GO:1990251":null}}


id: MONDO:1012393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"growth-hormone deficiency dwarfism,, non-human animal","termid":"MONDO:1011959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth-hormone deficiency dwarfism, dog","secondary_identifiers":["OMIA:001473-9615"],"termid":"MONDO:1012393","xrefs":{"Monarch":{"xref_id":"1012393"}}}


id: GO:0072724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 4-nitroquinoline N-oxide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 4-nitroquinoline N-oxide","termid":"GO:0072724"}


id: GO:0090256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"},{"relation_name":"regulates","term_name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090256"}


id: PR:O94443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC637.09 gene.","definition_xrefs":["UniProtKB:O94443","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized exonuclease C637.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.09","synonyms":[{"name":"Spom972h-SPAC637.09","type":"exact"}],"termid":"PR:O94443"}


id: PBO:0074139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A4","termid":"PBO:0074139"}


id: PBO:0029921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_squalene_level","termid":"PBO:0029921"}


id: GO:0031914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic plasticity","synonyms":[{"name":"down regulation of synaptic plasticity","type":"exact"},{"name":"down-regulation of synaptic plasticity","type":"exact"},{"name":"downregulation of synaptic plasticity","type":"exact"},{"name":"inhibition of synaptic plasticity","type":"narrow"}],"termid":"GO:0031914"}


id: FYPO:0007192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which rapid, back-and-forth movement of the mitotic spindle pole body (SPB), and associated chromosome movement, do not occur. Normally, SPB oscillation occurs during mitotic interphase (as well as prophase) but is restricted to a small space.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abolished mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abolished mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abolished mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abolished spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abolished spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"mitotic spindle pole body oscillation abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007192"}


id: GO:0048718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cibarial fish-trap bristle are generated and organized. A cibarial fish-trap bristle is a sensory bristle on the anterior plate of the cibarium.","definition_xrefs":["GOC:rc","FBbt:00004136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chaeta morphogenesis","termid":"GO:0008407"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"cibarial fish-trap bristle development","termid":"GO:0048725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cibarial fish-trap bristle morphogenesis","synonyms":[{"name":"fish trap bristle morphogenesis","type":"related"}],"termid":"GO:0048718"}


id: PBO:0068725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 14, pseudogene","termid":"PBO:0068725"}


id: PBO:0026773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_central_core","termid":"PBO:0026773"}


id: GO:0045271
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Respiratory chain complex I is an enzyme of the respiratory chain. It consists of several polypeptide chains and is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix. The electrons of NADH enter the chain at this complex.","definition_xrefs":["ISBN:0716749556","GOC:imk","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex","termid":"GO:0030964"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"respiratory chain complex I","secondary_identifiers":["GO:0045279"],"synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"exact"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"exact"},{"name":"NADH-Q oxidoreductase complex","type":"exact"},{"name":"electron transport complex I","type":"related"}],"termid":"GO:0045271"}


id: GO:0044861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein into a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport into membrane raft","termid":"GO:0032596"},{"relation_name":"is_a","term_name":"protein localization to plasma membrane raft","termid":"GO:0044860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein transport into plasma membrane raft","termid":"GO:0044861"}


id: PBO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tyrosine","termid":"PBO:0035761"}


id: GO:0098647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular assembly of collagen trimers with a 'beads on a string'-like structure.","definition_xrefs":["PMID:19693541","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"basement membrane/interstitial matrix interface","termid":"GO:0140086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen beaded filament","synonyms":[{"name":"beads on a string","type":"related"}],"termid":"GO:0098647"}


id: MONDO:0008962
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87386,87387],"is_not":false,"summary":null,"term":"MONDO:0008962"}]},"cv_name":"mondo","definition":"A Griscelli syndrome characterized by silvery gray sheen of the hair, hypopigmentation of the skin and neurological impairment without immunodeficiency that has material basis in mutations in the MYO5A gene on chromosome 15q21.2.","definition_xrefs":["PMID:9207796","DOID:0060832","PMID:12452176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Griscelli syndrome","termid":"MONDO:0018306"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Griscelli syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1859194","MEDGEN:347092","OMIM:214450","Orphanet:79476","MESH:C537301","ICD10CM:E70.3","icd11.foundation:875700770","GARD:2566"],"synonyms":[{"name":"GS1","type":"exact"},{"name":"Griscelli disease type 1","type":"related"},{"name":"Griscelli syndrome type 1","type":"exact"},{"name":"Griscelli syndrome with neurologic impairment","type":"related"},{"name":"Griscelli syndrome with neurological impairment","type":"exact"},{"name":"Griscelli syndrome, cutaneous and neurologic type","type":"related"},{"name":"Griscelli syndrome, cutaneous and neurological type","type":"exact"},{"name":"Griscelli syndrome, type 1","type":"related"},{"name":"Griscelli-PruniC)ras syndrome type 1","type":"exact"},{"name":"Griscelli-Pruniéras syndrome type 1","type":"exact"},{"name":"hypopigmentation-neurologic impairment syndrome","type":"exact"},{"name":"partial albinism and primary neurologic disease without hemophagocytic syndrome","type":"related"},{"name":"pigmentary dilution of the skin and hair, the presence of large clumps of pigment in hair shafts","type":"related"}],"termid":"MONDO:0008962","terms_by_termid":{"MONDO:0008962":null},"xrefs":{"Monarch":{"xref_id":"0008962"}}}


id: PATO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location with oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process to oxygen","termid":"PATO:0001458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic (for occurrence)","termid":"PATO:0001459"}


id: MONDO:0034976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired Creutzfeldt-Jakob disease","termid":"MONDO:0018686"},{"relation_name":"is_a","term_name":"nosocomial infection","termid":"MONDO:0043544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic Creutzfeldt-Jakob disease","secondary_identifiers":["MEDGEN:908476","GARD:22329","icd11.foundation:437591130","Orphanet:576379","UMLS:C2349757","NANDO:1200193"],"termid":"MONDO:0034976","xrefs":{"Monarch":{"xref_id":"0034976"}}}


id: GO:0040022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of female sex and sexual phenotype in the germ-line of the hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite germ-line sex determination","termid":"GO:0040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feminization of hermaphroditic germ-line","termid":"GO:0040022"}


id: PBO:0048823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 8","termid":"PBO:0048823"}


id: PATO:0000743
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000743 arousal value (obsolete PATO:0000743)","termid":"PATO:0000743"}


id: PBO:0083700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein required for endocytosis and actin patch assembly; functionally redundant with Ent1p; contains clathrin-binding motif at C-terminus; ENT2 has a paralog, ENT1, that arose from the whole genome duplication","termid":"PBO:0083700"}


id: GO:0071314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cocaine","termid":"GO:0042220"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cocaine","termid":"GO:0071314"}


id: GO:0015031
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id: SO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological_region characterized as a single heritable trait in a phenotype screen. The heritable phenotype may be mapped to a chromosome but generally has not been characterized to a specific gene locus.","definition_xrefs":["JAX:hdene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable_phenotypic_marker","synonyms":[{"name":"heritable phenotypic marker","type":"exact"},{"name":"phenotypic marker","type":"exact"}],"termid":"SO:0001500"}


id: PBO:0004164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L39 (predicted)","termid":"PBO:0004164"}


id: GO:0102575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxo-dodecanoyl-[acp] = 3-oxododecanoate + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-dodecanoyl-ACP hydrolase activity (obsolete GO:0102575)","termid":"GO:0102575"}


id: MONDO:0002720
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that occurs in sella turcica. Representative examples include craniopharyngioma and pituitary gland adenoma.","definition_xrefs":["NCIT:C4944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"sella turcica neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0748616","ONCOTREE:SELT","DOID:3643","MEDGEN:148188"],"synonyms":[{"name":"neoplasm of sella turcica","type":"exact"},{"name":"neoplasm of the sella turcica","type":"exact"},{"name":"sella turcica neoplasm","type":"exact"},{"name":"sella turcica tumor","type":"exact"},{"name":"sella turcica tumour","type":"exact"},{"name":"sellar neoplasm","type":"exact"},{"name":"sellar tumor","type":"exact"},{"name":"sellar tumour","type":"exact"},{"name":"selt","type":"related"},{"name":"tumor of sella turcica","type":"exact"},{"name":"tumor of the sella turcica","type":"exact"},{"name":"tumour of sella turcica","type":"exact"},{"name":"tumour of the sella turcica","type":"exact"}],"termid":"MONDO:0002720","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0002720"}}}


id: GO:1901592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via break-induced replication.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via break-induced replication","termid":"GO:1901591"},{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair via homologous recombination","termid":"GO:2000042"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via break-induced replication","termid":"GO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via break-induced replication","synonyms":[{"name":"down regulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"down-regulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"downregulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"inhibition of double-strand break repair via break-induced replication","type":"narrow"}],"termid":"GO:1901592"}


id: FYPO:0002556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is decreased, and the protein is instead detected distributed throughout the cell cortex of half of the cell nearer the non-growing end. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PomBase:vw","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","termid":"FYPO:0006638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to medial cortex, with protein distributed in cell cortex near non-growing end, during vegetative growth","synonyms":[{"name":"abolished protein localization to medial cortex during vegetative growth, with protein distributed in cortex of non-growing half of cell","type":"narrow"},{"name":"decreased protein localisation to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end","type":"exact"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end","type":"exact"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cortex of non-growing half of cell","type":"exact"},{"name":"decreased protein localization to medial ring, with protein distributed in cell cortex near non-growing end, during vegetative growth","type":"exact"},{"name":"reduced protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end","type":"exact"}],"termid":"FYPO:0002556"}


id: PBO:0091150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF4536, human DMAC1 ortholog, possibly has a general role in mitochondrial complex assembly","termid":"PBO:0091150"}


id: PBO:0083367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF KAP95/YLR347C","termid":"PBO:0083367"}


id: PATO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular adhesivity","termid":"PATO:0001531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterophilic","termid":"PATO:0001441"}


id: PBO:0077324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 62","termid":"PBO:0077324"}


id: MONDO:0010315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) due to gamma chain deficiency, also called SCID-X1, is a form of SCID characterized by severe and recurrent infections, associated with diarrhea and failure to thrive.","definition_xrefs":["Orphanet:276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to gamma chain deficiency","secondary_identifiers":["DOID:0060013","NCIT:C4682","EFO:0005555","NANDO:1200321","NANDO:2200694","GARD:5618","MEDGEN:220906","OMIM:300400","SCTID:203592006","UMLS:C1279481"],"synonyms":[{"name":"SCID, X-linked","type":"related"},{"name":"SCID-X1","type":"exact"},{"name":"SCIDX","type":"related"},{"name":"SCIDX1","type":"exact"},{"name":"T-B+ SCID due to gamma chain deficiency","type":"exact"},{"name":"T-B+ severe combined immunodeficiency due to gamma chain deficiency","type":"exact"},{"name":"T-B+ severe combined immunodeficiency, X-linked","type":"exact"},{"name":"X-SCID","type":"related"},{"name":"X-linked SCID","type":"related"},{"name":"X-linked severe combined immunodeficiency","type":"exact"},{"name":"XSCID","type":"exact"},{"name":"immunodeficiency 4","type":"related"},{"name":"severe combined immunodeficiency T- B+ due to gamma chain deficiency","type":"related"},{"name":"severe combined immunodeficiency T- B+, X-linked","type":"related"},{"name":"severe combined immunodeficiency, X-linked","type":"related"},{"name":"severe combined immunodeficiency, X-linked, T cell-negative, B cell-positive, NK cell-negative","type":"related"},{"name":"severe combined immunodeficiency, X-linked, X-linked recessive","type":"exact"},{"name":"thymic epithelial hypoplasia","type":"exact"}],"termid":"MONDO:0010315","xrefs":{"Monarch":{"xref_id":"0010315"}}}


id: PBO:0117436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in transmembrane trasnsport or organelle fission","termid":"PBO:0117436"}


id: FYPO:0006352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of filamentous actin (F-actin) in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type) during early mitosis (before anaphase).","definition_xrefs":["PomBase:mah","PMID:29343550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring","termid":"FYPO:0004740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal F-actin level in actomyosin contractile ring during early mitosis","synonyms":[{"name":"normal F-actin level in actomyosin contractile ring during early mitosis during mitotic cell cycle","type":"related"},{"name":"normal F-actin level in actomyosin contractile ring during early mitosis during vegetative growth","type":"exact"},{"name":"normal F-actin level in contractile ring during early mitosis","type":"exact"},{"name":"normal F-actin level in cytokinetic contractile ring during early mitosis","type":"exact"},{"name":"normal abundance of actin in actomyosin contractile ring in early mitosis","type":"exact"},{"name":"normal actomyosin contractile ring F-actin level during early mitosis","type":"exact"},{"name":"normal filamentous actin level in actomyosin contractile ring during early mitosis","type":"exact"}],"termid":"FYPO:0006352"}


id: PBO:0060329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IG","termid":"PBO:0060329"}


id: SO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between the 3'D-HEPTAMER and 3'D-NONAMER of a 3'D-RS.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_spacer","synonyms":[{"name":"3'D-SPACER","type":"exact"},{"name":"three prime D spacer","type":"exact"}],"termid":"SO:0000495"}


id: PBO:0082120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis","termid":"PBO:0082120"}


id: MONDO:0011251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","secondary_identifiers":["UMLS:C1865203","MEDGEN:400705","MESH:C566524","OMIM:602556"],"synonyms":[{"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","type":"exact"}],"termid":"MONDO:0011251","xrefs":{"Monarch":{"xref_id":"0011251"}}}


id: PBO:0084879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosome-associated protein; regulates mitochondrial DNA copy number and the size and distribution of mtDNA nucleoids; subunit of a complex containing Pet20p, Mam33p, and Pim1p that may regulate mtDNA replication; member of the PET20 domain-containing protein family; forms foci that partially co-localize with mtDNA","termid":"PBO:0084879"}


id: GO:0140863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-127 residue.","definition_xrefs":["PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0019787","GO:0140096","GO:0004842","GO:0003824"],"is_obsolete":false,"name":"histone H2AK127 ubiquitin ligase activity","synonyms":[{"name":"histone H2A-K127 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2A-K127 specific)","type":"exact"}],"termid":"GO:0140863"}


id: PBO:0045546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 1","termid":"PBO:0045546"}


id: PBO:0048187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor associated protein like 2","termid":"PBO:0048187"}


id: PBO:0069195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 449, pseudogene","termid":"PBO:0069195"}


id: PBO:0076025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24","termid":"PBO:0076025"}


id: MONDO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infection of eye","termid":"MONDO:0020944"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fungal keratitis","secondary_identifiers":["UMLS:C1262117","Orphanet:519930","icd11.foundation:712798367","GARD:22134","MEDGEN:687913","NCIT:C128370"],"termid":"MONDO:0033821","xrefs":{"Monarch":{"xref_id":"0033821"}}}


id: GO:0008924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + a quinone = oxaloacetate + a quinol. Vitamin K (menaquinone) and several other quinones can act as acceptors.","definition_xrefs":["RHEA:46012","PMID:234747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-malate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:MALATE-DEHYDROGENASE-ACCEPTOR-RXN","EC:1.1.5.4"],"synonyms":[{"name":"(S)-malate:(quinone) oxidoreductase activity","type":"related"},{"name":"(S)-malate:quinone oxidoreductase activity","type":"related"},{"name":"FAD-dependent malate dehydrogenase activity","type":"related"},{"name":"MQO activity","type":"broad"}],"termid":"GO:0008924"}


id: FYPO:0000467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased invasive growth (obsolete FYPO:0000467)","synonyms":[{"name":"invasive growth: increased","type":"related"}],"termid":"FYPO:0000467"}


id: PBO:0109657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type Cta5","termid":"PBO:0109657"}


id: GO:0098782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["PMID:25500157","PMID:25471887","PMID:22282805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mechanosensitive potassium channel activity","synonyms":[{"name":"mechanically-gated potassium channel activity","type":"exact"}],"termid":"GO:0098782"}


id: PBO:0086737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086737"}


id: PBO:0085237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis/trans-isomerase; activator of the phosphotyrosyl phosphatase activity of PP2A; involved in G1 phase progression, microtubule dynamics, bud morphogenesis and DNA repair; required for rapid reduction of Sgs1p levels in response to rapamycin; subunit of the Tap42p-Sit4p-Rrd1p complex; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085237"}


id: GO:0032432
data:
  {"annotated_genes":["SJAG_00938","SJAG_02864","SJAG_01739","SJAG_03088","SJAG_04887","SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119807,71925,77586],"is_not":false,"summary":null,"term":"GO:0032432"},{"annotations":[98640,108504,120018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070648"},{"annotations":[66450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"An assembly of actin filaments that are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01739":null,"SJAG_02864":null,"SJAG_03088":null,"SJAG_04621":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament bundle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:27734801":null,"PMID:36148799":null},"secondary_identifiers":["GO:0000141","GO:0030482"],"synonyms":[{"name":"actin cable","type":"related"}],"termid":"GO:0032432","terms_by_termid":{"GO:0001725":null,"GO:0032432":null,"GO:0070648":null}}


id: PBO:0005238
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of staurosporine","termid":"PBO:0005238"}


id: PBO:0086821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR187C is not an essential gene","termid":"PBO:0086821"}


id: PBO:0027742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_camptothecin","termid":"PBO:0027742"}


id: PBO:0029904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_localization_phenotype","termid":"PBO:0029904"}


id: GO:2000539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein geranylgeranylation","synonyms":[{"name":"regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000539"}


id: PBO:0039811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 2","termid":"PBO:0039811"}


id: GO:1903178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["PMID:19703902","GO_REF:0000059","GOC:PARL","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of tyrosine 3-monooxygenase activity (obsolete GO:1903178)","synonyms":[{"name":"activation of L-tyrosine hydroxylase activity","type":"narrow"},{"name":"activation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"narrow"},{"name":"activation of tyrosine 3-hydroxylase activity","type":"narrow"},{"name":"activation of tyrosine 3-monooxygenase activity","type":"narrow"},{"name":"activation of tyrosine hydroxylase activity","type":"narrow"},{"name":"positive regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"positive regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"positive regulation of TH activity","type":"exact"},{"name":"positive regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"positive regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"stimulation of TH activity","type":"exact"},{"name":"up regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"up regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"up regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"up regulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"up regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"up-regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"up-regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"up-regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"up-regulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"up-regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"upregulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"upregulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"upregulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"upregulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"upregulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903178"}


id: PBO:0039298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG12 alpha-1,6-mannosyltransferase","termid":"PBO:0039298"}


id: PBO:0041813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactivator associated arginine methyltransferase 1 pseudogene 1","termid":"PBO:0041813"}


id: MOD:02023
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a cervonoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"cervonoylated residue","termid":"MOD:02024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-cervonoylated residue","termid":"MOD:02023"}


id: MONDO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of RTEL1 on chromosome 20q13.33.","definition_xrefs":["DOID:0070020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 5","secondary_identifiers":["MEDGEN:767570","DOID:0070022","OMIM:615190","NCIT:C176928","UMLS:C3554656","GARD:15917"],"synonyms":[{"name":"DKCB5","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 5","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 4","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 5","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 5","type":"exact"}],"termid":"MONDO:0014076","xrefs":{"Monarch":{"xref_id":"0014076"}}}


id: PBO:0052853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-9","termid":"PBO:0052853"}


id: PBO:0058278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4655","termid":"PBO:0058278"}


id: PBO:0051700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-4-phosphatase type II B","termid":"PBO:0051700"}


id: MONDO:0011029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid tumor suppressor","secondary_identifiers":["MEDGEN:318644","OMIM:601308","UMLS:C1832510"],"synonyms":[{"name":"myeloid leukemia-related locus","type":"related"},{"name":"myeloid tumor suppressor","type":"exact"}],"termid":"MONDO:0011029","xrefs":{"Monarch":{"xref_id":"0011029"}}}


id: GO:0004791
data:
  {"annotated_genes":["SJAG_03653","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73576,80051],"is_not":false,"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thioredoxin-dithiol + NADP+ = thioredoxin-disulfide + H+ + NADPH.","definition_xrefs":["RHEA:20345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"protein-disulfide reductase [NAD(P)H] activity","termid":"GO:0047134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03653":null,"SJAG_04399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140096","GO:0015036","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"thioredoxin-disulfide reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02016","Reactome:R-HSA-9617735","EC:1.8.1.9","Reactome:R-HSA-73646","Reactome:R-HSA-1222485","MetaCyc:THIOREDOXIN-REDUCT-NADPH-RXN","Reactome:R-HSA-3323050"],"synonyms":[{"name":"NADPH:oxidized thioredoxin oxidoreductase activity","type":"exact"},{"name":"thioredoxin disulfide reductase activity","type":"broad"},{"name":"thioredoxin reductase (NADPH) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase (NADP) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase activity","type":"broad"},{"name":"thioredoxin-disulphide reductase activity","type":"broad"}],"termid":"GO:0004791","terms_by_termid":{"GO:0004791":null}}


id: FYPO:0007668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell is elongated and progression through the mitotic cell cycle is arrested in G1 phase.","definition_xrefs":["PMID:8121488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic G1 phase","termid":"FYPO:0000445"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell with cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle arrest in mitotic G1 phase with elongated cell","type":"exact"},{"name":"elongated cell with cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"elongated vegetative cell with cell cycle arrest in G1 phase of mitotic cell cycle","type":"exact"},{"name":"elongated vegetative cell with mitotic G1 phase cell cycle arrest","type":"exact"}],"termid":"FYPO:0007668"}


id: PATO:0001217
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001217 energy_unit (obsolete PATO:0001217)","termid":"PATO:0001217"}


id: PBO:0040273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 7","termid":"PBO:0040273"}


id: PBO:0029693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_iron_level","termid":"PBO:0029693"}


id: GO:0061081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the production of a cytokine that contributes to the immune response.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","synonyms":[{"name":"positive regulation of myeloid cell cytokine production involved in immune response","type":"related"}],"termid":"GO:0061081"}


id: PBO:0031540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascus_development","termid":"PBO:0031540"}


id: PBO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pep5/Vps11-like (predicted)","termid":"PBO:0015232"}


id: GO:0015504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cytosine(out) + H+(out) = cytosine(in) + H+(in).","definition_xrefs":["TC:2.A.39.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosine transmembrane transporter activity","termid":"GO:0015209"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"cytosine:proton symporter activity","synonyms":[{"name":"cytosine permease activity","type":"related"},{"name":"cytosine:hydrogen ion symporter activity","type":"exact"}],"termid":"GO:0015504"}


id: PBO:0017749
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 3'-5' exonuclease-to-polymerase ratio is about 1:30","termid":"PBO:0017749"}


id: MONDO:0010947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome (BCS) is caused by obstruction of hepatic venous outflow involving either the hepatic veins or the terminal segment of the inferior vena cava.","definition_xrefs":["Orphanet:131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"Budd-Chiari syndrome","secondary_identifiers":["NANDO:1200437","ICD10CM:I82.0","OMIM:600880","SCTID:82385007","UMLS:C0856761","MEDGEN:163632","MESH:D006502","icd11.foundation:1300118676","GARD:5968","ICD9:453.0","MedDRA:10006537"],"synonyms":[{"name":"BDCHS","type":"related"},{"name":"Budd-Chiari syndrome","type":"exact"},{"name":"Budd-Chiari syndrome, somatic","type":"exact"},{"name":"membranous obstruction of Inferior vena cava","type":"related"},{"name":"membranous obstruction of the inferior vena cava","type":"related"}],"termid":"MONDO:0010947","xrefs":{"Monarch":{"xref_id":"0010947"}}}


id: GO:0012506
data:
  {"annotated_genes":["SJAG_02234","SJAG_05344","SJAG_04912","SJAG_04489","SJAG_02177","SJAG_04517","SJAG_00900","SJAG_03511","SJAG_01167","SJAG_02282","SJAG_01939","SJAG_05210","SJAG_05345","SJAG_00557","SJAG_00638","SJAG_04569","SJAG_01809","SJAG_03385","SJAG_04936","SJAG_00108","SJAG_00104","SJAG_01633","SJAG_04024","SJAG_07012","SJAG_01242","SJAG_03892","SJAG_04474","SJAG_00339","SJAG_00301","SJAG_00314","SJAG_04391","SJAG_03250","SJAG_00800","SJAG_00490","SJAG_01379","SJAG_00906","SJAG_04070","SJAG_00192","SJAG_00072","SJAG_02349","SJAG_02453","SJAG_01112","SJAG_04609","SJAG_05207","SJAG_04513","SJAG_00379","SJAG_02100","SJAG_04644","SJAG_02482","SJAG_03347","SJAG_02587","SJAG_01981","SJAG_00299","SJAG_01508","SJAG_02429","SJAG_01025","SJAG_04822","SJAG_02805","SJAG_04002","SJAG_04565","SJAG_05289","SJAG_03907","SJAG_00284","SJAG_02539","SJAG_04349","SJAG_01236","SJAG_04023","SJAG_03783","SJAG_00416","SJAG_03558","SJAG_03153","SJAG_02160"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79908,108938],"is_not":false,"summary":null,"term":"GO:0012506"},{"annotations":[78127,62265,113383,113173],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[78464,74723,108711,58349],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[58833,65696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[80125,74092],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[94546,89259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[71294,78407,64431,93588,98807,107493,73899,78752,80256],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[98119,96408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"},{"annotations":[71733,75411,78790,95871,73420,77450,76039,75180,71763,76862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[90932],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[97746,59387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030659"},{"annotations":[80722,100072,96254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[78475,99042,80617,102340,60922,72971,102328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010008"},{"annotations":[76529,67670,74262,101439,70835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"},{"annotations":[72704,88470],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[78816,71391,72563],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[78076,71161,76117,71480,76658,70421],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[76525,78814,98019,99869,101441,88471,92359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[60550,62575,119605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[75621,99223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any membrane-bounded vesicle in the cell.","definition_xrefs":["GOC:mah","GOC:vesicle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle 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id: GO:0016208
data:
  {"annotated_genes":["SJAG_01859","SJAG_02741","SJAG_02785","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68915,70465,74314,89242],"is_not":false,"summary":null,"term":"GO:0016208"}]},"cv_name":"molecular_function","definition":"Binding to AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01859":null,"SJAG_02741":null,"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AMP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380930"],"termid":"GO:0016208","terms_by_termid":{"GO:0016208":null}}


id: GO:0090717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by reactivated memory T cells and B cells and directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.","definition_xrefs":["GOC:add","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune memory response involving T cells and B cells","termid":"GO:0090717"}


id: MONDO:0957825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 121","secondary_identifiers":["OMIM:620551","UMLS:C5882709","MEDGEN:1844128"],"synonyms":[{"name":"deafness, autosomal recessive 121","type":"narrow"}],"termid":"MONDO:0957825","xrefs":{"Monarch":{"xref_id":"0957825"}}}


id: GO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between a bundle of His cardiac muscle cell and a Purkinje myocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"bundle of His cell to Purkinje myocyte communication","termid":"GO:0086069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte communication by electrical coupling","synonyms":[{"name":"bundle of His cardiac muscle cell to Purkinje myocyte communication by electrical coupling","type":"exact"}],"termid":"GO:0086054"}


id: GO:0047628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + thymidine = AMP + thymidine 5'-phosphate.","definition_xrefs":["EC:2.7.1.118","MetaCyc:ADP--THYMIDINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"ADP-thymidine kinase activity","secondary_identifiers":["RHEA:13413"],"synonyms":[{"name":"ADP:dThd phosphotransferase activity","type":"related"},{"name":"ADP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine diphosphate-thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047628"}


id: PR:Q9UTE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MAK16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00377","PANTHER:PTHR23405:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mak16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.06","secondary_identifiers":["UniProtKB:Q9UTE6"],"synonyms":[{"name":"Spom972h-MAK16","type":"exact"}],"termid":"PR:Q9UTE6"}


id: PBO:0073645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC family like 1","termid":"PBO:0073645"}


id: MONDO:0004172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenocarcinofibroma that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine body mixed cancer","termid":"MONDO:0002879"},{"relation_name":"is_a","term_name":"adenocarcinofibroma","termid":"MONDO:0002991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus adenocarcinofibroma","secondary_identifiers":["DOID:7281"],"synonyms":[{"name":"adenocarcinofibroma of body of uterus","type":"exact"},{"name":"body of uterus adenocarcinofibroma","type":"exact"}],"termid":"MONDO:0004172","xrefs":{"Monarch":{"xref_id":"0004172"}}}


id: SO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structural sequence alteration or rearrangement encompassing one or more genome fragments, with 4 or more breakpoints.","definition_xrefs":["NCBI:th","SO:ke","FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"},{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_structural_alteration","secondary_identifiers":["SO:1000146"],"synonyms":[{"name":"complex","type":"related"},{"name":"complex chromosomal mutation","type":"exact"},{"name":"complex_chromosomal_mutation","type":"exact"}],"termid":"SO:0001784"}


id: MONDO:0012314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any short QT syndrome in which the cause of the disease is a mutation in the KCNJ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short QT syndrome","termid":"MONDO:0000453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome type 3","secondary_identifiers":["MEDGEN:400662","GARD:18635","MESH:C566504","UMLS:C1865018","OMIM:609622"],"synonyms":[{"name":"KCNJ2 short QT syndrome","type":"exact"},{"name":"SQT3","type":"related"},{"name":"short QT syndrome 3","type":"related"},{"name":"short QT syndrome caused by mutation in KCNJ2","type":"exact"},{"name":"short QT syndrome type 3","type":"exact"}],"termid":"MONDO:0012314","xrefs":{"Monarch":{"xref_id":"0012314"}}}


id: MONDO:1010795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the TNXB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic-like, TNXB-related, dog","secondary_identifiers":["OMIA:002203-9615"],"synonyms":[{"name":"clEDS","type":"exact"}],"termid":"MONDO:1010795","xrefs":{"Monarch":{"xref_id":"1010795"}}}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: PBO:0074980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-22","termid":"PBO:0074980"}


id: MONDO:0017365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kindler syndrome","termid":"MONDO:0008260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary acrokeratotic poikiloderma, Weary type","secondary_identifiers":["Orphanet:2907","GARD:18781","icd11.foundation:837824031","MEDGEN:96059","UMLS:C0406556"],"synonyms":[{"name":"congenital poikiloderma with bullae, Weary type","type":"exact"}],"termid":"MONDO:0017365","xrefs":{"Monarch":{"xref_id":"0017365"}}}


id: PBO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H70 (predicted)","termid":"PBO:0002578"}


id: GO:1901208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart looping","termid":"GO:1901207"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart looping","synonyms":[{"name":"down regulation of cardiac looping","type":"exact"},{"name":"down regulation of heart looping","type":"exact"},{"name":"down-regulation of cardiac looping","type":"exact"},{"name":"down-regulation of heart looping","type":"exact"},{"name":"downregulation of cardiac looping","type":"exact"},{"name":"downregulation of heart looping","type":"exact"},{"name":"inhibition of cardiac looping","type":"exact"},{"name":"inhibition of heart looping","type":"narrow"},{"name":"negative regulation of cardiac looping","type":"exact"}],"termid":"GO:1901208"}


id: PBO:0057646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1238","termid":"PBO:0057646"}


id: PBO:0055201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2626","termid":"PBO:0055201"}


id: GO:1903186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:19467235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitellogenesis","synonyms":[{"name":"regulation of yolk production","type":"exact"}],"termid":"GO:1903186"}


id: PBO:0050714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1","termid":"PBO:0050714"}


id: GO:0016094
data:
  {"annotated_genes":["SJAG_00554","SJAG_04954","SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100372,72342,74842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["GOC:go_curators","PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"polyprenol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol anabolism","type":"exact"},{"name":"polyprenol biosynthesis","type":"exact"},{"name":"polyprenol formation","type":"exact"},{"name":"polyprenol synthesis","type":"exact"}],"termid":"GO:0016094","terms_by_termid":{"GO:0019408":null}}


id: PBO:0028931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028931"}


id: FYPO:0004175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal in cells of the h- mating type.","definition_xrefs":["PMID:8668157","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency in h- cells","synonyms":[{"name":"reduced mating efficiency in h- cells","type":"exact"}],"termid":"FYPO:0004175"}


id: PBO:0049146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 3","termid":"PBO:0049146"}


id: PR:O14335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein PLAGL1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein scr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.02c","secondary_identifiers":["UniProtKB:O14335"],"synonyms":[{"name":"SPBC1D7.02c","type":"related"},{"name":"Spom972h-PLAGL1","type":"exact"}],"termid":"PR:O14335"}


id: PBO:0085950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant exhibits a respiratory growth defect and synthetic interactions with prohibitin (phb1) and gem1; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085950"}


id: PBO:0075476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 3","termid":"PBO:0075476"}


id: GO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of germ cells, reproductive cells in multicellular organisms, resulting in the expansion of a cell population.","definition_xrefs":["CL:0000586","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell proliferation","termid":"GO:0036093"}


id: MONDO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome X","secondary_identifiers":["MEDGEN:1826030","GARD:20911","UMLS:C5679690","Orphanet:263726"],"synonyms":[{"name":"partial deletion of chromosome type X","type":"exact"},{"name":"partial monosomy of chromosome X","type":"exact"}],"termid":"MONDO:0017003","xrefs":{"Monarch":{"xref_id":"0017003"}}}


id: GO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (heparosan-N-sulfate)(n) = (heparan-N-sulfate)(n). Converts D-glucosyluronate residues to L-iduronate residues.","definition_xrefs":["EC:5.1.3.17","MetaCyc:5.1.3.17-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"heparosan-N-sulfate-glucuronate 5-epimerase activity","secondary_identifiers":["RHEA:20197","Reactome:R-HSA-2076371","Reactome:R-HSA-2024100"],"synonyms":[{"name":"C-5 uronosyl epimerase activity","type":"related"},{"name":"D-glucuronyl C-5 epimerase activity","type":"related"},{"name":"heparosan epimerase activity","type":"related"},{"name":"heparosan-N-sulfate-D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"heparosan-N-sulphate-glucuronate 5-epimerase activity","type":"exact"},{"name":"poly[(1,4)-beta-D-glucuronosyl-(1,4)-N-sulfo-alpha-D-glucosaminyl] glucurono-5-epimerase activity","type":"related"},{"name":"polyglucuronate epimerase activity","type":"related"}],"termid":"GO:0047464"}


id: PBO:0083501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR136W; null mutant displays increased levels of spontaneous Rad52 foci","termid":"PBO:0083501"}


id: MONDO:0016791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to mitochondrial DNA anomalies (obsolete MONDO:0016791)","secondary_identifiers":["Orphanet:254758"],"synonyms":[{"name":"OXPHOS disease due to mitochondrial DNA anomalies","type":"exact"},{"name":"OXPHOS disease due to mtDNA anomalies","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to mtDNA anomalies","type":"exact"}],"termid":"MONDO:0016791","xrefs":{"Monarch":{"xref_id":"0016791"}}}


id: GO:0006405
data:
  {"annotated_genes":["SJAG_00992","SJAG_01529","SJAG_01449","SJAG_04083","SJAG_04148","SJAG_02757","SJAG_04589","SJAG_04310","SJAG_04622","SJAG_03156","SJAG_01374","SJAG_02661","SJAG_01013","SJAG_04360","SJAG_03283","SJAG_00471","SJAG_01083","SJAG_03847","SJAG_01715","SJAG_04721","SJAG_03002","SJAG_02520","SJAG_03693","SJAG_04536","SJAG_04645","SJAG_01652","SJAG_01584","SJAG_04347","SJAG_02209","SJAG_04472","SJAG_01185","SJAG_00375","SJAG_00641","SJAG_03729","SJAG_00298","SJAG_03299","SJAG_04480","SJAG_05328","SJAG_02704","SJAG_01065","SJAG_04017","SJAG_04656","SJAG_04379","SJAG_04202","SJAG_02534","SJAG_03986","SJAG_03300","SJAG_00093","SJAG_02274","SJAG_04115","SJAG_00178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75528,75836,80390,94351,96484,105434],"is_not":false,"summary":null,"term":"GO:0006405"},{"annotations":[73212,77043,61261,74491,89842,80528,101514,117656,73139,77871,62654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[73565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[111509,101758,70216,74864,116191,119321,110812,116704,73560,114848,118415,73398,74598,74328,80778,77678,92554,104306,96891,76075,112137,74014,102226,110241,103013,75089,108008,116444,71810,97303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[105649,72396,78923,106122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[79941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"RNA export from nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA export from cell nucleus","type":"exact"},{"name":"RNA export out of nucleus","type":"exact"},{"name":"RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"RNA-nucleus export","type":"exact"}],"termid":"GO:0006405","terms_by_termid":{"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016973":null,"GO:0031990":null,"GO:0071528":null}}


id: PBO:0065771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QKI interacting lncRNA","termid":"PBO:0065771"}


id: PATO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001090 absolute elasticity value (obsolete PATO:0001090)","termid":"PATO:0001090"}


id: GO:0007211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by octopamine or tyramine binding to their receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, and ending with the regulation of a downstream cellular process. Octopamine and tyramine are decarboxylation products of tyrosine, and are the invertebrate counterparts of the vertebrate adrenergic transmitters.","definition_xrefs":["GOC:mah","PMID:15355245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"octopamine or tyramine signaling pathway","synonyms":[{"name":"octopamine or tyramine signalling pathway","type":"exact"},{"name":"octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:0007211"}


id: PBO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.4","termid":"PBO:0000394"}


id: PBO:0068926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 169, pseudogene","termid":"PBO:0068926"}


id: GO:0180024
data:
  {"annotated_genes":["SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104097],"is_not":false,"summary":null,"term":"GO:0180024"}]},"cv_name":"molecular_function","definition":"An activity in which a protein, or group of proteins, acts to restrict the size of a fenestration in a membrane or membrane system (i.e. restrict the diameter of a hole in a membrane). An example of this is the molecular function is performed by ESCRT-III proteins at the nuclear envelope of fission yeast during anaphase B.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane grommet activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180024","terms_by_termid":{"GO:0180024":null}}


id: FYPO:0002581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any tRNA processing intermediates with 3' extensions measured in the nucleus is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of nuclear tRNA processing intermediates with 3' extensions","synonyms":[{"name":"increased accumulation of nuclear tRNA processing intermediates with 3' extensions","type":"related"},{"name":"increased level of nuclear tRNA processing intermediates with 3' extensions during mitotic cell cycle","type":"related"},{"name":"increased level of nuclear tRNA processing intermediates with 3' extensions during vegetative growth","type":"exact"}],"termid":"FYPO:0002581"}


id: MONDO:0100325
data:
  {"annotated_genes":["SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85568],"is_not":false,"summary":null,"term":"MONDO:0100325"}]},"cv_name":"mondo","definition":"A very rare syndrome associating chondrodysplasia with dentinogenesis imperfecta.","definition_xrefs":["Orphanet:166272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontochondrodysplasia","termid":"MONDO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"odontochondrodysplasia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8717","SCTID:717823001","UMLS:C5542277","MEDGEN:1784281","OMIM:184260"],"synonyms":[{"name":"Goldblatt chondrodysplasia","type":"exact"},{"name":"Goldblatt syndrome","type":"exact"},{"name":"ODCD","type":"exact"},{"name":"chondrodysplasia-dentinogenesis imperfecta-joint laxity syndrome","type":"exact"},{"name":"odontochondrodysplasia","type":"broad"},{"name":"spondylometaphyseal dysplasia with dentinogenesis imperfecta","type":"related"}],"termid":"MONDO:0100325","terms_by_termid":{"MONDO:0100325":null},"xrefs":{"Monarch":{"xref_id":"0100325"}}}


id: GO:0046144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-alanine and related amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid metabolic process (obsolete GO:0046144)","synonyms":[{"name":"D-alanine family amino acid metabolism","type":"exact"}],"termid":"GO:0046144"}


id: GO:0015640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of peptidoglycan peptides from one side of a membrane to the other. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transmembrane transporter activity","termid":"GO:0015647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"peptidoglycan peptide transmembrane transporter activity","synonyms":[{"name":"murein peptide transporter activity","type":"exact"},{"name":"muropeptide transporter activity","type":"exact"}],"termid":"GO:0015640"}


id: GO:1904023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["GO_REF:0000058","GOC:dph","GOC:TermGenie","PMID:20935145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"regulation of homofermentation","type":"exact"},{"name":"regulation of homofermentative lactate fermentation","type":"exact"},{"name":"regulation of homofermentative pathway","type":"exact"},{"name":"regulation of homolactate fermentation","type":"exact"},{"name":"regulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904023"}


id: PBO:0086949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family nucleolar DNA helicase; role in genome integrity maintenance, chromosome synapsis, meiotic joint molecule/crossover formation; stimulates activity of Top3p; rapidly lost in response to rapamycin in Rrd1p-dependent manner; forms nuclear foci upon DNA replication stress; yeast SGS1 complements mutations in human homolog BLM implicated in Bloom syndrome; also similar to human WRN implicated in Werner syndrome; human BLM and WRN can each complement yeast null mutant","termid":"PBO:0086949"}


id: FYPO:0006609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex for periods of shorter duration than normal.","definition_xrefs":["PomBase:mah","PMID:29514920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein dwell time during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"decreased duration of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased duration of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased duration of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"decreased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"decreased protein dwell time during transient localization to Cdr2 medial cortical node complex","type":"exact"},{"name":"reduced protein dwell time during intermittent localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006609"}


id: GO:0039669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell which occurs via retraction of the viral-bound pilus to bring the virus in contact with the host cell membrane, followed by fusion of the bacteriophage membrane with the host outer membrane.","definition_xrefs":["VZ:981","GOC:bf","GOC:jl","PMID:20427561"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction and membrane fusion (obsolete GO:0039669)","termid":"GO:0039669"}


id: PBO:0091721
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure update","termid":"PBO:0091721"}


id: PR:Q96WS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.08","synonyms":[{"name":"Spom972h-wtf11","type":"exact"}],"termid":"PR:Q96WS1"}


id: GO:1990494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["PMID:18256290"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cytokinesis, actomyosin contractile ring assembly (obsolete GO:1990494)","synonyms":[{"name":"regulation of mitotic cytokinesis, actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1990494"}


id: PBO:0085379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP binding cassette (ABC) transporter; multidrug transporter and general stress response factor implicated in cellular detoxification; regulated by Pdr1p, Pdr3p and Pdr8p; promoter contains a PDR responsive element; PDR15 has a paralog, PDR5, that arose from the whole genome duplication","termid":"PBO:0085379"}


id: PBO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP42 family protein involved in TOR signalling (predicted)","termid":"PBO:0005298"}


id: SO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The major class of splice site with dinucleotides GT and AG for donor and acceptor sites, respectively.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000675 canonical_splice_site (obsolete SO:0000675)","synonyms":[{"name":"canonical splice site","type":"exact"}],"termid":"SO:0000675"}


id: MONDO:0100392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;17). (A cytogenetic abnormality that involves a translocation between chromosomes 11 and 17.)","definition_xrefs":["NCIT:C175582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;17)","synonyms":[{"name":"AML, t(11;17)","type":"exact"}],"termid":"MONDO:0100392","xrefs":{"Monarch":{"xref_id":"0100392"}}}


id: PBO:0040958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 29","termid":"PBO:0040958"}


id: PBO:0017872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester transmembrane transporter (predicted)","termid":"PBO:0017872"}


id: PBO:0004259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL family protein Mlh1 (predicted)","termid":"PBO:0004259"}


id: PBO:0077556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 263","termid":"PBO:0077556"}


id: PBO:0069244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 499, pseudogene","termid":"PBO:0069244"}


id: MOD:01364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#S","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site S","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01364"}


id: PBO:0087565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of structure-specific Mms4p-Mus81p endonuclease; cleaves branched DNA; involved in recombination, DNA repair, and joint molecule formation/resolution during meiotic recombination; phosphorylation of the non-catalytic subunit Mms4p by Cdc28p and Cdc5p during mitotic cell cycle activates the function of Mms4p-Mus81p","termid":"PBO:0087565"}


id: GO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a heart valve over time, from its formation to the mature structure. A heart valve is a structure that restricts the flow of blood to different regions of the heart and forms from an endocardial cushion.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve development","synonyms":[{"name":"cardiac valve development","type":"exact"}],"termid":"GO:0003170"}


id: MOD:00139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-succinyl-L-tryptophan.","definition_xrefs":["Unimod:64#N-term","PubMed:11857757","PubMed:8471040","RESID:AA0130","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-succinyl-L-tryptophan","synonyms":[{"name":"(2S)-2-(3-carboxypropanoyl)amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"(2S)-2-amino-(6,7-dihydro-6,7-dioxo-1H-indole)-3-propanoic acid","type":"exact"},{"name":"MOD_RES N2-succinyltryptophan","type":"exact"},{"name":"N2-succinyl-L-tryptophan","type":"exact"},{"name":"Succinic anhydride labeling reagent light form (N-term)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:00139"}


id: FYPO:0006750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during nitrogen starvation","termid":"FYPO:0001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal pre-tRNA level during nitrogen starvation","synonyms":[{"name":"normal pre-tRNA accumulation during nitrogen starvation","type":"related"},{"name":"normal pre-tRNA level during nitrogen depletion","type":"exact"},{"name":"normal pre-tRNA level during nitrogen deprivation","type":"exact"},{"name":"normal pre-tRNA transcript level during nitrogen starvation","type":"exact"},{"name":"normal tRNA level during nitrogen starvation","type":"broad"},{"name":"normal tRNA primary transcript level during nitrogen starvation","type":"exact"},{"name":"normal transfer RNA precursor level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006750"}


id: PBO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 9, pseudogene","termid":"PBO:0080130"}


id: PBO:0028754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactomannan_absent_from_cell_wall","termid":"PBO:0028754"}


id: PR:Q09911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30D11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.14c","synonyms":[{"name":"Spom972h-SPAC30D11.14c","type":"exact"}],"termid":"PR:Q09911"}


id: GO:0015099
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nickel (Ni) cations from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-141B"],"synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015099","terms_by_termid":{"GO:0044750":null}}


id: MONDO:0015378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fourth branchial cleft anomaly","secondary_identifiers":["MEDGEN:837698","GARD:19936","SCTID:707234001","Orphanet:141037","UMLS:C3873490"],"synonyms":[{"name":"fourth branchial cleft cyst","type":"exact"},{"name":"fourth branchial cleft fistula","type":"exact"}],"termid":"MONDO:0015378","xrefs":{"Monarch":{"xref_id":"0015378"}}}


id: PBO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter Cat1","termid":"PBO:0002989"}


id: PBO:0054448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1845","termid":"PBO:0054448"}


id: MONDO:0054680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"epiphyseal dysplasia, multiple, 7","secondary_identifiers":["UMLS:C4540251","MEDGEN:1620874","DOID:0070302","OMIM:617719","Orphanet:647676"],"synonyms":[{"name":"EDM7","type":"related"},{"name":"epiphyseal dysplasia, multiple, 7","type":"exact"},{"name":"multiple epiphyseal dysplasia 7","type":"related"},{"name":"multiple epiphyseal dysplasia type 7","type":"exact"}],"termid":"MONDO:0054680","xrefs":{"Monarch":{"xref_id":"0054680"}}}


id: PBO:0085627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in export of proteins from the endoplasmic reticulum; ERV15 has a paralog, ERV14, that arose from the whole genome duplication","termid":"PBO:0085627"}


id: MONDO:0006046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant serous cystic epithelial neoplasm arising from the ovary. It is characterized by the presence of glandular, papillary, or solid structures. Psammoma bodies may be present. In well differentiated cases the malignant epithelial cells resemble the cells of fallopian tube epithelium. In poorly differentiated cases the malignant epithelial cells show anaplastic features.","definition_xrefs":["NCIT:C7978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cystadenocarcinoma","termid":"MONDO:0002702"},{"relation_name":"is_a","term_name":"ovarian serous adenocarcinoma","termid":"MONDO:0005211"},{"relation_name":"is_a","term_name":"serous cystadenocarcinoma","termid":"MONDO:0024621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian serous cystadenocarcinoma","secondary_identifiers":["UMLS:C0279663","MEDGEN:83541","DOID:5746","EFO:1000043"],"synonyms":[{"name":"ovarian serous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0006046","xrefs":{"Monarch":{"xref_id":"0006046"}}}


id: GO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alginic acid metabolic process","synonyms":[{"name":"alginate metabolic process","type":"exact"},{"name":"alginate metabolism","type":"exact"},{"name":"alginic acid metabolism","type":"exact"}],"termid":"GO:0042120"}


id: GO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenoceptor signaling pathway","type":"exact"}],"termid":"GO:0071875"}


id: PBO:0029483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_curved_cells_(obsolete_FYPO:0002232)","termid":"PBO:0029483"}


id: PBO:0039903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 5","termid":"PBO:0039903"}


id: PBO:0087775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of UAF (upstream activation factor) complex; UAF is an RNA polymerase I specific transcription stimulatory factor composed of Uaf30p, Rrn5p, Rrn9p, Rrn10p, histones H3 and H4; targeting factor for the UAF that facilitates activation of many rDNA genes; deletion decreases cellular growth rate; UAF30 has a paralog, TRI1, that arose from the whole genome duplication","termid":"PBO:0087775"}


id: GO:0030876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an alpha and a beta receptor subunit and an interleukin ligand. In human, Interleukin-19, -20 and -24 bind IL20RA/IL20RB receptor subunits and Interleukin-20 and -24 bind IL22RA1/IL20RB receptor subunits.","definition_xrefs":["PMID:12351624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"interleukin-20 receptor complex","synonyms":[{"name":"IL-20 receptor complex","type":"exact"}],"termid":"GO:0030876"}


id: FYPO:0002366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4me during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002366"}


id: GO:0150035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by BDNF, modulating synaptic transmission.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:19448629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0099183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0150035"}


id: GO:0035601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acyl group, any group or radical of the form RCO- where R is an organic group, from a protein amino acid.","definition_xrefs":["GOC:se","PMID:12080046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deacylation","synonyms":[{"name":"protein amino acid deacylation","type":"exact"}],"termid":"GO:0035601"}


id: MONDO:0020390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery coming from patent ductus arteriosus","secondary_identifiers":["UMLS:C3163916","GARD:19619","MEDGEN:756326","Orphanet:99049"],"termid":"MONDO:0020390","xrefs":{"Monarch":{"xref_id":"0020390"}}}


id: GO:0098810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter molecules from the extrasynaptic space into the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter uptake","termid":"GO:0001504"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter reuptake","termid":"GO:0098810"}


id: GO:0050993
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylallyl diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dimethylallyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"DPP metabolic process","type":"exact"},{"name":"DPP metabolism","type":"exact"},{"name":"dimethylallyl diphosphate metabolism","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolic process","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0050993","terms_by_termid":{"GO:0050992":null}}


id: MONDO:0024351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial pityriasis rubra pilaris (obsolete MONDO:0024351)","termid":"MONDO:0024351","xrefs":{"Monarch":{"xref_id":"0024351"}}}


id: PBO:0087785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sugar alcohol phosphatase; polyol phosphatase that hydrolyzes sorbitol-6-phosphate, ribitol-5-phosphate, and (D)-glycerol-3-phosphate, maintaining phosphoglucose isomerase (PGI) activity in the presence of PGI-inhibitory sugar alcohols; expression correlated with growth rate; GFP-fusion protein localizes to the cytoplasm and nucleus; homozygous diploid mutant displays increased glycogen accumulation; member of the haloacid dehalogenase (HAD) superfamily","termid":"PBO:0087785"}


id: PBO:0039617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 receptor","termid":"PBO:0039617"}


id: PBO:0072522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 51","termid":"PBO:0072522"}


id: PBO:0041209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 1","termid":"PBO:0041209"}


id: PBO:0082807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of UDP-GlcNAc transferase; required for second step of dolichyl-linked oligosaccharide synthesis; anchors catalytic subunit Alg13p to ER membrane; similar to bacterial and human glycosyltransferases; both human homologs ALG13 and ALG14 are required to complement yeast alg14 mutant; mutations of human ALG14 cause congenital myasthenic syndrome","termid":"PBO:0082807"}


id: PR:P87175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-(apurinic or apyrimidinic site) lyase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22748:SF0","PRO:DNx","OMA:SCHPO02802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) lyase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.10","secondary_identifiers":["UniProtKB:P87175"],"synonyms":[{"name":"AP endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APEX2","type":"exact"},{"name":"apurinic-apyrimidinic endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87175"}


id: PBO:0005345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sed5 Vesicle Protein Svp26 (predicted)","termid":"PBO:0005345"}


id: FYPO:0007824
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119941,119942],"is_not":false,"summary":null,"term":"FYPO:0007824"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which a response to quorum sensing molecules (QSMs) is decreased. The amount of QSMs may be normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal quorum sensing","termid":"FYPO:0007823"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased quorum sensing response","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"deficient in quorum sensing","type":"exact"},{"name":"quorum sensing attenuated","type":"exact"},{"name":"quorum sensing decreased","type":"exact"},{"name":"quorum sensing deficient","type":"exact"}],"termid":"FYPO:0007824","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007824":null}}


id: GO:0070222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfide dehydrogenase.","definition_xrefs":["MetaCyc:PWY-5274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfide oxidation, using sulfide dehydrogenase","synonyms":[{"name":"sulphide oxidation, using sulfide dehydrogenase","type":"exact"}],"termid":"GO:0070222"}


id: PBO:0077701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin N","termid":"PBO:0077701"}


id: MONDO:1010038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival hypertrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival hypertrophy, non-human animal","secondary_identifiers":["OMIA:000409"],"termid":"MONDO:1010038","xrefs":{"Monarch":{"xref_id":"1010038"}}}


id: PBO:0038972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2b receptor","termid":"PBO:0038972"}


id: GO:0170005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of cyclic nucleotide phosphodiesterase.","definition_xrefs":["PMID:6087882","PMID:6259174","PMID:6667031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"cyclic nucleotide phosphodiesterase activator activity","termid":"GO:0170005"}


id: MONDO:0859355
data:
  {"annotated_genes":["SJAG_01338"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85983],"is_not":false,"summary":null,"term":"MONDO:0859355"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"inflammatory poikiloderma with hair abnormalities and acral keratoses","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070510","MEDGEN:1824066","OMIM:620199","UMLS:C5774293"],"termid":"MONDO:0859355","terms_by_termid":{"MONDO:0859355":null},"xrefs":{"Monarch":{"xref_id":"0859355"}}}


id: PBO:0069836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1122, pseudogene","termid":"PBO:0069836"}


id: PBO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 68","termid":"PBO:0042011"}


id: GO:1903609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","PMID:18923542","GOC:rl","GO_REF:0000059","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of inward rectifier potassium channel activity","synonyms":[{"name":"down regulation of Kir channel activity","type":"exact"},{"name":"down regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"down-regulation of Kir channel activity","type":"exact"},{"name":"down-regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"downregulation of Kir channel activity","type":"exact"},{"name":"downregulation of inward rectifier potassium channel activity","type":"exact"},{"name":"inhibition of Kir channel activity","type":"narrow"},{"name":"inhibition of inward rectifier potassium channel activity","type":"narrow"},{"name":"negative regulation of Kir channel activity","type":"exact"}],"termid":"GO:1903609"}


id: SO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which the 5,6-dihydrouracil is bound to the ribose ring.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine","secondary_identifiers":["http://en.wikipedia.org/wiki/Dihydrouridine","RNAMOD:051"],"synonyms":[{"name":" D","type":"exact"}],"termid":"SO:0001228"}


id: PBO:0089506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1","termid":"PBO:0089506"}


id: PBO:0088613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear HMG-like acidic protein Mak16","termid":"PBO:0088613"}


id: GO:0022865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables electron flow across a biological membrane, from donors localized on one side of the membrane to acceptors localized on the other side. These systems contribute to or subtract from the membrane potential, depending on the direction of electron flow. They are therefore important to cellular energetics.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:5"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane electron transfer carrier (obsolete GO:0022865)","termid":"GO:0022865"}


id: PBO:0067524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 667, pseudogene","termid":"PBO:0067524"}


id: PBO:0079136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSNAX-DISC1 readthrough (NMD candidate)","termid":"PBO:0079136"}


id: MONDO:0008976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin-6-sulfaturia, defective cellular immunity, nephrotic syndrome","secondary_identifiers":["OMIM:215250","MEDGEN:349095","UMLS:C1859104","MESH:C565852"],"synonyms":[{"name":"chondroitin-6-Sulfaturia, defective cellular immunity, nephrotic syndrome","type":"exact"}],"termid":"MONDO:0008976","xrefs":{"Monarch":{"xref_id":"0008976"}}}


id: MONDO:0027687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raltegravir toxicity","secondary_identifiers":["Orphanet:240905"],"termid":"MONDO:0027687","xrefs":{"Monarch":{"xref_id":"0027687"}}}


id: PBO:0058129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4431","termid":"PBO:0058129"}


id: FYPO:0002188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a normal volume and spheroid shape. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, normal volume spheroid cells (obsolete FYPO:0002188)","synonyms":[{"name":"inviable microcolony, normal volume rounded cells","type":"exact"},{"name":"inviable microcolony, normal volume spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002188"}


id: MONDO:0016317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limbic encephalitis with NMDA receptor antibodies (obsolete MONDO:0016317)","termid":"MONDO:0016317","xrefs":{"Monarch":{"xref_id":"0016317"}}}


id: GO:0005992
data:
  {"annotated_genes":["SJAG_01862","SJAG_01209","SJAG_00182","SJAG_01531","SJAG_01646","SJAG_00129","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61952,62672,64606,68356,68844,69523,109282],"is_not":false,"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:jl","ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolic process","termid":"GO:0005991"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"mycose biosynthesis","type":"exact"},{"name":"mycose biosynthetic process","type":"exact"},{"name":"mykose biosynthesis","type":"exact"},{"name":"mykose biosynthetic process","type":"exact"},{"name":"trehalose anabolism","type":"exact"},{"name":"trehalose biosynthesis","type":"exact"},{"name":"trehalose formation","type":"exact"},{"name":"trehalose synthesis","type":"exact"}],"termid":"GO:0005992","terms_by_termid":{"GO:0005992":null}}


id: PBO:0067197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 261, pseudogene","termid":"PBO:0067197"}


id: MONDO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"combined immunodeficiency with skin granulomas","secondary_identifiers":["DOID:0112253","Orphanet:157949","MEDGEN:435945","UMLS:C2673536","GARD:13587","OMIM:233650","MESH:C567115"],"synonyms":[{"name":"CCHIDG","type":"related"},{"name":"CID due to RAG 1/2 deficiency","type":"exact"},{"name":"combined cellular and humoral immune defects with granulomas","type":"related"},{"name":"combined immunodeficiency due to RAG 1/2 deficiency","type":"exact"}],"termid":"MONDO:0009306","xrefs":{"Monarch":{"xref_id":"0009306"}}}


id: GO:0016711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavonoid + NADPH + H+ + O2 = 3'-hydroxyflavonoid + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"flavonoid 3'-monooxygenase activity","secondary_identifiers":["MetaCyc:FLAVONOID-3-MONOOXYGENASE-RXN","RHEA:16337"],"synonyms":[{"name":"NADPH:flavonoid-3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3-hydroxylase","type":"related"},{"name":"flavonoid 3-monooxygenase","type":"related"},{"name":"flavonoid,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"}],"termid":"GO:0016711"}


id: GO:1904602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of serotonin-activated cation-selective channel activity. Mainly found in pre- and postsynaptic membranes of the brain and gastrointestinal tract. Depending on its location it transports Ca2+, Mg2+, Na+ or K+. It is always a pentamer, containing at least the 5HT3A subunit forming 5HT3A homopentamers or 5HT3A/B heteropentamers. In human, 5HT3A/C, A/D and A/E heteropentamers also exist.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000088","PMID:16116092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"serotonin receptor complex","termid":"GO:0098665"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"serotonin-activated cation-selective channel complex","synonyms":[{"name":"5-HT-3 receptor complex","type":"exact"},{"name":"5-HT3 receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor 3 complex","type":"exact"},{"name":"5HT3 receptor complex","type":"exact"},{"name":"serotonin receptor complex","type":"broad"}],"termid":"GO:1904602"}


id: PBO:0067107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 149, pseudogene","termid":"PBO:0067107"}


id: GO:1905401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["PMID:24187568","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"positively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905401"}


id: GO:0030261
data:
  {"annotated_genes":["SJAG_00207","SJAG_05193","SJAG_03048","SJAG_00871","SJAG_00768","SJAG_01873","SJAG_03832","SJAG_05032","SJAG_03682","SJAG_03942","SJAG_01837","SJAG_00646","SJAG_03161","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010032"},{"annotations":[112073,88356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990893"},{"annotations":[106569,70872,98115,113774,72478,92151,72172,105000,118101,77133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007076"},{"annotations":[102741,117070],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03682":null,"SJAG_03832":null,"SJAG_03942":null,"SJAG_05032":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chromosome condensation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000068"],"synonyms":[{"name":"DNA condensation","type":"broad"},{"name":"eukaryotic chromosome condensation","type":"exact"},{"name":"nuclear chromosome condensation","type":"exact"}],"termid":"GO:0030261","terms_by_termid":{"GO:0007076":null,"GO:0010032":null,"GO:1903380":null,"GO:1990893":null}}


id: GO:0102789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cyanidin = H+ + cyanidin 5-O-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-D-glucose:cyanidin 5-O-beta-D-glucosyltransferase activity (obsolete GO:0102789)","termid":"GO:0102789"}


id: PBO:0039358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenin Y-linked","termid":"PBO:0039358"}


id: MONDO:0014071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy-dystroglycanopathy, type A in which the cause of the disease is a mutation in the B3GALNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11","secondary_identifiers":["GARD:15915","DOID:0111230","MEDGEN:767552","UMLS:C3554638","OMIM:615181"],"synonyms":[{"name":"B3GALNT2 muscular dystrophy-dystroglycanopathy, type A","type":"exact"},{"name":"MDDGA11","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, B3Galnt2-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 11","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies, type A, 11","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, type A caused by mutation in B3GALNT2","type":"exact"}],"termid":"MONDO:0014071","xrefs":{"Monarch":{"xref_id":"0014071"}}}


id: PBO:0046321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 2","termid":"PBO:0046321"}


id: PBO:0090400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion transmembrane transporter","termid":"PBO:0090400"}


id: PBO:0064267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G1","termid":"PBO:0064267"}


id: MONDO:0006718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous lesions arising from infection with Treponema pallidum. In the primary stage, 18-21 days following infection, one or more chancres appear. If untreated, the subsequent stages of the disease appear as syphilids. These eruptions are superficial, nondestructive, exanthematic, transient, macular roseolas that may later be maculopapular or papular polymorphous or scaly, pustular, pigmented eruptions.(Arnold, Odom, and James, Andrew's Diseases of the Skin, 8th ed, p409)","definition_xrefs":["MESH:D013591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous syphilis","secondary_identifiers":["MEDGEN:52623","EFO:1000887","UMLS:C0039132"],"synonyms":[{"name":"Treponema pallidum caused skin disease caused by bacterial infection","type":"exact"},{"name":"Treponema pallidum skin disease caused by bacterial infection","type":"exact"}],"termid":"MONDO:0006718","xrefs":{"Monarch":{"xref_id":"0006718"}}}


id: GO:0048536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen development","termid":"GO:0048536"}


id: GO:0043567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"regulation of IGF receptor signaling pathway","type":"exact"},{"name":"regulation of IGF receptor signalling pathway","type":"exact"},{"name":"regulation of insulin-like growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0043567"}


id: PBO:0076105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 10","termid":"PBO:0076105"}


id: PBO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 2","termid":"PBO:0072104"}


id: MONDO:0015997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectopia lentis-chorioretinal dystrophy-myopia syndrome is characterized by anomalies of the lens (ectopia and cataracts) and retina (generalized tapetoretinal dystrophy and total retinal detachment). Myopia has also been reported. It has been described in four members of the same family, all resulting from a consanguineous marriage. The mode of transmission is autosomal recessive.","definition_xrefs":["Orphanet:1884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectopia lentis-chorioretinal dystrophy-myopia syndrome","secondary_identifiers":["MESH:C536124","MEDGEN:419715","GARD:3999","UMLS:C2931115","SCTID:722437006"],"synonyms":[{"name":"ectopia lentis chorioretinal dystrophy myopia","type":"related"},{"name":"noble Bass Sherman syndrome","type":"related"},{"name":"noble-Bass-Sherman syndrome","type":"exact"}],"termid":"MONDO:0015997","xrefs":{"Monarch":{"xref_id":"0015997"}}}


id: GO:0003425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures and contributes to oriented chondrocyte division in the growth plate.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitotic spindle orientation","termid":"GO:0000132"},{"relation_name":"is_a","term_name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in establishment of planar polarity","termid":"GO:0090176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0051179","GO:0007163","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"establishment of mitotic spindle orientation involved in growth plate cartilage chondrocyte division","termid":"GO:0003425"}


id: FYPO:0002434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable morphology","termid":"FYPO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"short actin cables","synonyms":[{"name":"decreased actin cable length","type":"exact"},{"name":"short actin cables during mitotic cell cycle","type":"related"},{"name":"short actin cables during vegetative growth","type":"exact"},{"name":"short formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002434"}


id: GO:0006076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan catabolic process","synonyms":[{"name":"1,3-beta-D-glucan catabolic process","type":"exact"},{"name":"1,3-beta-glucan breakdown","type":"exact"},{"name":"1,3-beta-glucan catabolism","type":"exact"},{"name":"1,3-beta-glucan degradation","type":"exact"},{"name":"beta-1,3 glucan breakdown","type":"exact"},{"name":"beta-1,3 glucan catabolic process","type":"exact"},{"name":"beta-1,3 glucan catabolism","type":"exact"},{"name":"beta-1,3 glucan degradation","type":"exact"}],"termid":"GO:0006076"}


id: MONDO:0017065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lumbosacral spina bifida aperta","secondary_identifiers":["Orphanet:268388","GARD:20954","MEDGEN:1748032","UMLS:C5439434","icd11.foundation:417689735"],"termid":"MONDO:0017065","xrefs":{"Monarch":{"xref_id":"0017065"}}}


id: PBO:0052372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF18B divergent transcript","termid":"PBO:0052372"}


id: MONDO:1012110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000519-9685"],"termid":"MONDO:1012110","xrefs":{"Monarch":{"xref_id":"1012110"}}}


id: PBO:0045841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 31","termid":"PBO:0045841"}


id: PBO:0088252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24/Pet20","termid":"PBO:0088252"}


id: MONDO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of breast fibroadenoma without clinical significance. It is characterized by distortion and compression of the ducts by proliferating stromal cells.","definition_xrefs":["NCIT:C4271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibroadenoma","termid":"MONDO:0002056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast intracanalicular fibroadenoma","secondary_identifiers":["DOID:2656","MEDGEN:137772","ICDO:9011/0","UMLS:C0334496"],"synonyms":[{"name":"breast intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular breast fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma of breast","type":"exact"},{"name":"intracanalicular fibroadenoma of the breast","type":"exact"}],"termid":"MONDO:0002377","xrefs":{"Monarch":{"xref_id":"0002377"}}}


id: FYPO:0005777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to acetaldehyde.","definition_xrefs":["PMID:27687866","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to acetaldehyde","synonyms":[{"name":"increased number of Rad22 foci during cellular response to acetaldehyde","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to acetaldehyde during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to acetaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0005777"}


id: MONDO:0002985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pustulosis of palm and sole (obsolete MONDO:0002985)","termid":"MONDO:0002985","xrefs":{"Monarch":{"xref_id":"0002985"}}}


id: SO:1000110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that reverts the sequence of a previous frameshift mutation back to the initial frame.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000110 frame_restoring_sequence_variant (obsolete SO:1000110)","synonyms":[{"name":"frame restoring mutation","type":"exact"},{"name":"frame restoring sequence variant","type":"exact"}],"termid":"SO:1000110"}


id: MONDO:0016496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pharyngeal-cervical-brachial variant of Guillain-Barre syndrome","secondary_identifiers":["MEDGEN:1682775","GARD:20614","Orphanet:231426","UMLS:C5190783"],"synonyms":[{"name":"PCB variant of GBS","type":"exact"},{"name":"PCB variant of Guillain-Barre syndrome","type":"exact"},{"name":"PCB variant of Guillain-Barré syndrome","type":"exact"},{"name":"pharyngeal-cervical-brachial variant of Guillain-Barré syndrome","type":"related"},{"name":"pharyngeal-cervical-brachial weakness","type":"exact"},{"name":"pharyngo-cervico-brachial variant of GBS","type":"exact"},{"name":"pharyngo-cervico-brachial variant of Guillain-Barre syndrome","type":"exact"},{"name":"pharyngo-cervico-brachial variant of Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016496","xrefs":{"Monarch":{"xref_id":"0016496"}}}


id: GO:2000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of glucose","synonyms":[{"name":"regulation of glucose detection","type":"exact"},{"name":"regulation of glucose perception","type":"related"},{"name":"regulation of glucose sensing","type":"related"}],"termid":"GO:2000970"}


id: PBO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 24","termid":"PBO:0071886"}


id: PBO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase 3","termid":"PBO:0061760"}


id: PATO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000662 volume_quantity (obsolete PATO:0000662)","termid":"PATO:0000662"}


id: GO:0061031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the endodermal digestive tract are generated and organized. The endodermal digestive tract includes those portions of the digestive tract that are derived from endoderm.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal digestive tract morphogenesis","termid":"GO:0061031"}


id: MONDO:0012921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the CCR5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 22","secondary_identifiers":["OMIM:612522","DOID:0110759","MESH:C567284","MEDGEN:390900","UMLS:C2675864"],"synonyms":[{"name":"CCR5 type 1 diabetes mellitus","type":"exact"},{"name":"IDDM22","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 22","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 22","type":"exact"},{"name":"insulin-dependent diabetes mellitus 22","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in CCR5","type":"exact"}],"termid":"MONDO:0012921","xrefs":{"Monarch":{"xref_id":"0012921"}}}


id: GO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of the pre-synaptic cell to the post-synaptic cell via adhesion molecules that contributes to synapse maturation.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in synapse maturation","synonyms":[{"name":"trans-synaptic adhesion","type":"exact"}],"termid":"GO:0090125"}


id: PBO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase (predicted)","termid":"PBO:0003279"}


id: PBO:0016563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ASCC1 ortholog","termid":"PBO:0016563"}


id: GO:1904755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of gut granule assembly","synonyms":[{"name":"regulation of gut granule biogenesis","type":"exact"},{"name":"regulation of gut granule formation","type":"exact"}],"termid":"GO:1904755"}


id: PBO:0068006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 308","termid":"PBO:0068006"}


id: PBO:0058763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6887","termid":"PBO:0058763"}


id: MONDO:0017188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia, familial, 2","termid":"MONDO:0011153"},{"relation_name":"is_a","term_name":"diazoxide-resistant focal hyperinsulinism","termid":"MONDO:0019265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"diazoxide-resistant focal hyperinsulinism due to Kir6.2 deficiency","secondary_identifiers":["GARD:17286","UMLS:C5191060","Orphanet:276603","MEDGEN:1673560"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia due to Kir6.2 deficiency, diazoxide-resistant focal form","type":"exact"}],"termid":"MONDO:0017188","xrefs":{"Monarch":{"xref_id":"0017188"}}}


id: MONDO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tungiasis (obsolete MONDO:0000300)","termid":"MONDO:0000300","xrefs":{"Monarch":{"xref_id":"0000300"}}}


id: PBO:0073300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 22","termid":"PBO:0073300"}


id: MONDO:0012755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 7 (EA7) is an exceedingly rare form of Hereditary episodic ataxia characterized by ataxia with weakness, vertigo, and dysarthria without interictal findings.","definition_xrefs":["Orphanet:209970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 7","secondary_identifiers":["UMLS:C2677843","OMIM:611907","MESH:C567459","DOID:0050995","GARD:17108","icd11.foundation:1855038011","MEDGEN:383209","SCTID:718752007"],"synonyms":[{"name":"EA7","type":"related"},{"name":"episodic ataxia, type 7","type":"related"}],"termid":"MONDO:0012755","xrefs":{"Monarch":{"xref_id":"0012755"}}}


id: GO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a glucocorticoid receptor into the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete glucocorticoid receptor import into nucleus (obsolete GO:0002147)","synonyms":[{"name":"glucocorticoid receptor nuclear translocation","type":"narrow"}],"termid":"GO:0002147"}


id: PBO:0091554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase","termid":"PBO:0091554"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: GO:0086090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential","type":"narrow"}],"termid":"GO:0086090"}


id: PBO:0045920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14","termid":"PBO:0045920"}


id: GO:1904171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:25651887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"negatively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of bleb assembly","synonyms":[{"name":"down regulation of bleb assembly","type":"exact"},{"name":"down regulation of cell blebbing","type":"exact"},{"name":"down-regulation of bleb assembly","type":"exact"},{"name":"down-regulation of cell blebbing","type":"exact"},{"name":"downregulation of bleb assembly","type":"exact"},{"name":"downregulation of cell blebbing","type":"exact"},{"name":"inhibition of bleb assembly","type":"narrow"},{"name":"inhibition of cell blebbing","type":"narrow"},{"name":"negative regulation of cell blebbing","type":"exact"}],"termid":"GO:1904171"}


id: GO:0009064
data:
  {"annotated_genes":["SJAG_00043","SJAG_01592","SJAG_02276","SJAG_01461","SJAG_03457","SJAG_04577","SJAG_00120","SJAG_00359","SJAG_03266","SJAG_04054","SJAG_03224","SJAG_00937","SJAG_00636","SJAG_00714","SJAG_00964","SJAG_03434","SJAG_00529","SJAG_03306","SJAG_00392","SJAG_00495","SJAG_00635","SJAG_00660","SJAG_02235","SJAG_00412","SJAG_01903","SJAG_00695","SJAG_04145","SJAG_03398","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118126,72615,94634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[78654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[92066,80025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[91240,105120,112200,93299,112294,88192,102985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006536"},{"annotations":[71737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[72310,57591,72782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006541"},{"annotations":[70622,118781,78835,110851,106893,112296,102986,111467,98517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[113593,78657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[118127,59861,111622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[67580,91241,64709,78271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[78384,70662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[76195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00120":null,"SJAG_00359":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00495":null,"SJAG_00529":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00964":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02276":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03306":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glutamine family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8964539"],"synonyms":[{"name":"glutamine family amino acid metabolism","type":"exact"}],"termid":"GO:0009064","terms_by_termid":{"GO:0006536":null,"GO:0006538":null,"GO:0006541":null,"GO:0006542":null,"GO:0010121":null,"GO:0010133":null,"GO:0019544":null,"GO:0019676":null,"GO:0033387":null,"GO:0042450":null,"GO:0055129":null,"GO:0097054":null}}


id: GO:0045683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermis development","synonyms":[{"name":"down regulation of epidermis development","type":"exact"},{"name":"down-regulation of epidermis development","type":"exact"},{"name":"downregulation of epidermis development","type":"exact"},{"name":"inhibition of epidermis development","type":"narrow"},{"name":"negative regulation of epidermal development","type":"exact"},{"name":"negative regulation of hypodermis development","type":"related"}],"termid":"GO:0045683"}


id: GO:0007628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg.","definition_xrefs":["GOC:jid","ISBN:0198606907","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult locomotory behavior","termid":"GO:0008344"},{"relation_name":"is_a","term_name":"walking behavior","termid":"GO:0090659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult walking behavior","synonyms":[{"name":"adult walking behaviour","type":"exact"}],"termid":"GO:0007628"}


id: PBO:0029578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0029578"}


id: GO:0098754
data:
  {"annotated_genes":["SJAG_04674","SJAG_04608","SJAG_04242","SJAG_03316","SJAG_04399","SJAG_03497","SJAG_00270","SJAG_01162","SJAG_02907","SJAG_02276","SJAG_04125","SJAG_06611","SJAG_03363","SJAG_05181","SJAG_02106","SJAG_00141","SJAG_03494","SJAG_01612","SJAG_00419","SJAG_02630","SJAG_02515","SJAG_03951","SJAG_01596","SJAG_01199","SJAG_01628","SJAG_01344","SJAG_02010","SJAG_01216","SJAG_04632","SJAG_03797","SJAG_01734","SJAG_04953","SJAG_02247","SJAG_03166","SJAG_00614","SJAG_04726","SJAG_04823","SJAG_00365","SJAG_03288","SJAG_01351","SJAG_04063","SJAG_01078","SJAG_04404","SJAG_01869","SJAG_01651","SJAG_02973","SJAG_04788","SJAG_02960","SJAG_02988","SJAG_04403","SJAG_04516","SJAG_01457","SJAG_02599","SJAG_00179","SJAG_03476","SJAG_01995","SJAG_03108","SJAG_01803","SJAG_00489","SJAG_03303","SJAG_00219","SJAG_05256","SJAG_00903","SJAG_00988","SJAG_03623","SJAG_03653","SJAG_00668","SJAG_01404","SJAG_01973","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113889,119136,93487,98722,99373,103156,88324,90469,100687,95044,97457,99560,88425,100207,95319,112679,88328,93486,92804,103985,109097,103229,113399,115090,118573,114989,118995,113851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990748"},{"annotations":[113123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110095"},{"annotations":[97406,71228,97368,118598,93667,108811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"},{"annotations":[114130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140114"},{"annotations":[95559,118684,117761,105417,109216,100363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[105420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[102579,87757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070458"},{"annotations":[69112,107171,65648,63762,57614,68532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098869"},{"annotations":[71227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010273"},{"annotations":[94128,94129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010312"},{"annotations":[95895,78512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[92172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043387"},{"annotations":[61055,89337,58106,74688,89759,93497,65337,69281,99632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"},{"annotations":[106980,100367,95926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110052"},{"annotations":[118346,58591,63858],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of a toxic substance. These may include transport of the toxic substance away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"},{"relation_name":"part_of","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01078":null,"SJAG_01145":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01803":null,"SJAG_01869":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03363":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_03951":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098754","terms_by_termid":{"GO:0010273":null,"GO:0010312":null,"GO:0019430":null,"GO:0043387":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110052":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null,"GO:1990961":null}}


id: PBO:0018074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase Oms1 (predicted)","termid":"PBO:0018074"}


id: GO:0102471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6C-glucosyl-2-hydroxynaringenin = isovitexin-7-olate + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxynaringenin-6C-glucoside dehydratase activity (obsolete GO:0102471)","termid":"GO:0102471"}


id: MONDO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-X-linked congenital disorder of glycosylation with intellectual disability as a major feature (obsolete MONDO:0018286)","secondary_identifiers":["Orphanet:371064"],"synonyms":[{"name":"non-X-linked CDG with intellectual disability as a major feature","type":"exact"}],"termid":"MONDO:0018286","xrefs":{"Monarch":{"xref_id":"0018286"}}}


id: MONDO:1012757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the VLDLR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar hypoplasia, VLDLR-associated, dog","secondary_identifiers":["OMIA:001947-9615"],"synonyms":[{"name":"Dandy-Walker-like malformation","type":"related"},{"name":"inferior cerebellar hypoplasia","type":"related"}],"termid":"MONDO:1012757","xrefs":{"Monarch":{"xref_id":"1012757"}}}


id: FYPO:0003101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly occurs to a lower extent than normal in regions containing protein-coding genes. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PMID:24095277","GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased heterochromatin assembly at protein coding gene","synonyms":[{"name":"decreased heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at protein-coding gene","type":"exact"},{"name":"decreased heterochromatin formation at protein coding gene","type":"exact"},{"name":"reduced heterochromatin assembly at protein coding gene","type":"exact"}],"termid":"FYPO:0003101"}


id: MONDO:0013867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brown-Vialetto-van Laere syndrome in which the cause of the disease is a mutation in the SLC52A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin transporter deficiency","termid":"MONDO:0008891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Brown-Vialetto-van Laere syndrome 2","secondary_identifiers":["GARD:12861","Orphanet:572550","NCIT:C183529","MEDGEN:766452","UMLS:C3553538","HGNC:30224","OMIM:614707","DOID:0080786"],"synonyms":[{"name":"BVVLS2","type":"exact"},{"name":"Brown-Vialetto-Van Laere syndrome type 2","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome 2","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome caused by mutation in SLC52A2","type":"exact"},{"name":"SLC52A2 Brown-Vialetto-van Laere syndrome","type":"exact"}],"termid":"MONDO:0013867","xrefs":{"Monarch":{"xref_id":"0013867"}}}


id: PBO:0054786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2199","termid":"PBO:0054786"}


id: PBO:0080837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 1","termid":"PBO:0080837"}


id: GO:1901788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzoyl-CoA.","definition_xrefs":["MetaCyc:CENTBENZCOA-PWY","GOC:yaf","GOC:TermGenie","MetaCyc:P321-PWY","MetaCyc:PWY-1361","UniPathway:UPA00739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"},{"relation_name":"is_a","term_name":"benzoyl-CoA metabolic process","termid":"GO:1901787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"benzoyl-CoA catabolic process","synonyms":[{"name":"benzoyl-CoA breakdown","type":"exact"},{"name":"benzoyl-CoA catabolism","type":"exact"},{"name":"benzoyl-CoA degradation","type":"exact"}],"termid":"GO:1901788"}


id: PBO:0059916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 2","termid":"PBO:0059916"}


id: GO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["PMID:12878180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin J receptor activity","synonyms":[{"name":"PGJ receptor activity","type":"related"},{"name":"PGJ(2) receptor activity","type":"exact"}],"termid":"GO:0001785"}


id: MONDO:0012303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 8","secondary_identifiers":["OMIM:609570","MEDGEN:332101","UMLS:C1835968"],"synonyms":[{"name":"Mgr8","type":"related"},{"name":"migraine with or without aura, susceptibility to, 8","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 8","type":"exact"},{"name":"migraine, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0012303","xrefs":{"Monarch":{"xref_id":"0012303"}}}


id: PBO:0056920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY family member 4B","termid":"PBO:0056920"}


id: GO:0007166
data:
  {"annotated_genes":["SJAG_02823","SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105901,108826],"is_not":false,"summary":null,"term":"GO:0007166"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor located on the cell surface. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02258":null,"SJAG_02823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73887"],"synonyms":[{"name":"cell surface receptor linked signal transduction","type":"exact"},{"name":"cell surface receptor linked signaling pathway","type":"exact"},{"name":"cell surface receptor linked signalling pathway","type":"exact"}],"termid":"GO:0007166","terms_by_termid":{"GO:0007166":null}}


id: _global:hyperparasite_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"_global:has_host"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasite_of","secondary_identifiers":["RO:0002553"],"synonyms":[{"name":"epiparasite of","type":"related"},{"name":"hyperparasitoid of","type":"narrow"}],"termid":"_global:hyperparasite_of"}


id: GO:0030992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger subcomplex of the intraciliary transport particle; characterized complexes have molecular weights around 550 kDa.","definition_xrefs":["PMID:19253336","PMID:14570576","GOC:cilia","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intraciliary transport particle","termid":"GO:0030990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intraciliary transport particle B","synonyms":[{"name":"IFT B complex","type":"related"},{"name":"IFT complex B","type":"related"},{"name":"intraflagellar transport complex B","type":"exact"},{"name":"intraflagellar transport particle B","type":"exact"}],"termid":"GO:0030992"}


id: PBO:0073474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan epsilon","termid":"PBO:0073474"}


id: MONDO:0014739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MET gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 97","secondary_identifiers":["DOID:0110539","UMLS:C4084709","GARD:22655","MEDGEN:899875","OMIM:616705"],"synonyms":[{"name":"DFNB97","type":"narrow"},{"name":"MET autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 97","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 97","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MET","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 97","type":"narrow"},{"name":"deafness, autosomal recessive 97","type":"narrow"},{"name":"deafness, autosomal recessive type 97","type":"narrow"}],"termid":"MONDO:0014739","xrefs":{"Monarch":{"xref_id":"0014739"}}}


id: PBO:0042663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 19","termid":"PBO:0042663"}


id: GO:0006072
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69610,62972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"glycerol-3-phosphate metabolism","type":"exact"}],"termid":"GO:0006072","terms_by_termid":{"GO:0046168":null}}


id: MONDO:0013578
data:
  {"annotated_genes":["SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86284],"is_not":false,"summary":null,"term":"MONDO:0013578"}]},"cv_name":"mondo","definition":"An autosomal dominant non-syndromic intellectual disability that has material basis in an autosomal dominant mutation of DYRK1A on chromosome 21q22.13.","definition_xrefs":["DOID:0070037"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"DYRK1A-related intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614104","GARD:13527","MEDGEN:1799566","Orphanet:464306","UMLS:C5568143"],"synonyms":[{"name":"MRD7","type":"exact"},{"name":"autosomal dominant intellectual disability 7","type":"exact"},{"name":"autosomal dominant mental retardation 7","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 7","type":"related"},{"name":"intellectual disability, autosomal dominant 7","type":"related"},{"name":"intellectual disability, autosomal dominant type 7","type":"exact"},{"name":"mental retardation, autosomal dominant 7","type":"related"},{"name":"mental retardation, autosomal dominant type 7","type":"exact"}],"termid":"MONDO:0013578","terms_by_termid":{"MONDO:0013578":null},"xrefs":{"Monarch":{"xref_id":"0013578"}}}


id: PBO:0062358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily R member 2 pseudogene","termid":"PBO:0062358"}


id: PBO:0028998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0028998"}


id: FYPO:0002595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation is normal. All histone phosphorylation may be assayed, or phosphorylation of specific sites on specific histones may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone phosphorylation during vegetative growth","synonyms":[{"name":"normal histone phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002595"}


id: PBO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase copper chaperone Ccs1","termid":"PBO:0002807"}


id: GO:0035775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric glomerulus are generated and organized. The pronephric glomerulus is part of the pronephric nephron and is restricted to one body segment.","definition_xrefs":["GOC:yaf","PMID:18787069","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus morphogenesis","termid":"GO:0072102"},{"relation_name":"part_of","term_name":"pronephric glomerulus development","termid":"GO:0039021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric glomerulus morphogenesis","termid":"GO:0035775"}


id: MONDO:0016905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 6q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 6. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 6q deletion include developmental delay, intellectual disability, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 6","termid":"MONDO:0016871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 6","secondary_identifiers":["GARD:3760","UMLS:C0795816","MEDGEN:162772","MESH:C537807","Orphanet:262047","icd11.foundation:41692353"],"synonyms":[{"name":"6q deletion","type":"related"},{"name":"6q monosomy","type":"related"},{"name":"chromosome 6q deletion","type":"related"},{"name":"deletion 6q","type":"related"},{"name":"monosomy 6q","type":"related"},{"name":"partial deletion of chromosome 6q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 6","type":"exact"},{"name":"partial monosomy 6q","type":"related"},{"name":"partial monosomy of chromosome 6q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 6","type":"exact"}],"termid":"MONDO:0016905","xrefs":{"Monarch":{"xref_id":"0016905"}}}


id: PBO:0053001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 1","termid":"PBO:0053001"}


id: GO:0006608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNP protein import into nucleus (obsolete GO:0006608)","synonyms":[{"name":"snRNP protein import into cell nucleus","type":"exact"},{"name":"snRNP protein transport from cytoplasm to nucleus","type":"exact"},{"name":"snRNP protein-nucleus import","type":"exact"}],"termid":"GO:0006608"}


id: GO:1900712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of tensidol B biosynthetic process","termid":"GO:1900710"},{"relation_name":"positively_regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tensidol B biosynthetic process","synonyms":[{"name":"activation of tensidol B anabolism","type":"exact"},{"name":"activation of tensidol B biosynthesis","type":"exact"},{"name":"activation of tensidol B biosynthetic process","type":"narrow"},{"name":"activation of tensidol B formation","type":"exact"},{"name":"activation of tensidol B synthesis","type":"exact"},{"name":"positive regulation of tensidol B anabolism","type":"exact"},{"name":"positive regulation of tensidol B biosynthesis","type":"exact"},{"name":"positive regulation of tensidol B formation","type":"exact"},{"name":"positive regulation of tensidol B synthesis","type":"exact"},{"name":"up regulation of tensidol B anabolism","type":"exact"},{"name":"up regulation of tensidol B biosynthesis","type":"exact"},{"name":"up regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up regulation of tensidol B formation","type":"exact"},{"name":"up regulation of tensidol B synthesis","type":"exact"},{"name":"up-regulation of tensidol B anabolism","type":"exact"},{"name":"up-regulation of tensidol B biosynthesis","type":"exact"},{"name":"up-regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up-regulation of tensidol B formation","type":"exact"},{"name":"up-regulation of tensidol B synthesis","type":"exact"},{"name":"upregulation of tensidol B anabolism","type":"exact"},{"name":"upregulation of tensidol B biosynthesis","type":"exact"},{"name":"upregulation of tensidol B biosynthetic process","type":"exact"},{"name":"upregulation of tensidol B formation","type":"exact"},{"name":"upregulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900712"}


id: PBO:0074035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 21","termid":"PBO:0074035"}


id: PBO:0030387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030387"}


id: PBO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase (predicted)","termid":"PBO:0002560"}


id: GO:0034869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + OH- = 2,4,4-trimethyl-3-oxopentanoate + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-3-oxopentanoyl-CoA thioesterase activity (obsolete GO:0034869)","termid":"GO:0034869"}


id: PR:O13702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycerol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00898","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.03c","secondary_identifiers":["UniProtKB:O13702"],"synonyms":[{"name":"GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gldA","type":"exact"}],"termid":"PR:O13702"}


id: PBO:0085808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; encoded within an intron of the mitochondrial COX1 gene; translational initiation codon is predicted to be ATA rather than ATG","termid":"PBO:0085808"}


id: PBO:0052174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK4-CATSPERZ readthrough (NMD candidate)","termid":"PBO:0052174"}


id: PBO:0085246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (PPIase); nuclear proline isomerase; affects expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; contains a nucleoplasmin-like fold and can form pentamers","termid":"PBO:0085246"}


id: PBO:0061691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210","termid":"PBO:0061691"}


id: MOD:00927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of a residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated residue.","definition_xrefs":["PubMed:16335955","PubMed:3802193","Unimod:510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:00927"}


id: FYPO:0004894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is decreased during sporulation.","definition_xrefs":["PomBase:mah","PMID:11069657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased 1,3-beta-D-glucan synthase activity during sporulation","synonyms":[{"name":"reduced 1,3-beta-D-glucan synthase activity during sporulation","type":"exact"}],"termid":"FYPO:0004894"}


id: PBO:0005273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein Negative Regulator","termid":"PBO:0005273"}


id: PBO:0057814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3135a","termid":"PBO:0057814"}


id: MONDO:0032610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 5","secondary_identifiers":["GARD:16315","MEDGEN:1648292","OMIM:618226","DOID:0112068","UMLS:C4748754"],"synonyms":[{"name":"MC1DN5","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 5","type":"related"}],"termid":"MONDO:0032610","xrefs":{"Monarch":{"xref_id":"0032610"}}}


id: PR:Q9UUA8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saw1 gene.","definition_xrefs":["UniProtKB:Q9UUA8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C409.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.16c","synonyms":[{"name":"Spom972h-saw1","type":"exact"}],"termid":"PR:Q9UUA8"}


id: MONDO:0030887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that is characterized by early-onset severe dilated cardiomyopathy that progresses rapidly to heart failure in the neonatal period without evidence of intervening hypertrophy and that has material basis in homozygous or compound heterozygous mutation in the LMOD2 gene on chromosome 7q31.","definition_xrefs":["DOID:0081163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2G","secondary_identifiers":["OMIM:619897","MEDGEN:1801983","UMLS:C5676995"],"synonyms":[{"name":"CMD2G","type":"exact"},{"name":"cardiomyopathy, dilated, 2G","type":"exact"}],"termid":"MONDO:0030887","xrefs":{"Monarch":{"xref_id":"0030887"}}}


id: GO:0072263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of intraglomerular glomerular mesangium cells in the metanephros by cell division, resulting in the expansion of their population. Intraglomerular mesangial cells are specialized pericytes located among the glomerular capillaries within a renal corpuscle of a kidney. They are required for filtration, structural support and phagocytosis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraglomerular mesangial cell proliferation","termid":"GO:0072123"},{"relation_name":"is_a","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric intraglomerular mesangial cell proliferation","termid":"GO:0072263"}


id: PBO:0034531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase_during_cellular_response_to_UV","termid":"PBO:0034531"}


id: GO:0140112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion a set of components to form an extracellular vesicule, a membrane-bounded vesicle that is released into the extracellular region. Extracellular vesicles include exosomes, microvesicles and apoptotic bodies, based on the mechanism by which they are released from cells and differentiated based on their size and content.","definition_xrefs":["PMID:28736435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular vesicle biogenesis","synonyms":[{"name":"extracellular vesicle assembly","type":"exact"}],"termid":"GO:0140112"}


id: PBO:0049492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 2","termid":"PBO:0049492"}


id: PBO:0090102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc8","termid":"PBO:0090102"}


id: FYPO:0004492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 5' end of an RNA molecule is abnormal.","definition_xrefs":["GO:0000967","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abnormal RNA 5'-end processing","synonyms":[{"name":"abnormal RNA 5'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 5'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004492"}


id: GO:0000062
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"fatty-acyl-CoA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8848247"],"synonyms":[{"name":"fatty-acyl binding","type":"broad"},{"name":"fatty-acyl-coenzyme A binding","type":"exact"}],"termid":"GO:0000062","terms_by_termid":{"GO:0036042":null}}


id: PBO:0113542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar SNX-BAR protein, regulates TORC1 signaling during autophagy induction; binds phosphatidylinositol-3-phosphate; vacuolar localization of Vps501p is dependent upon direct interaction with Iml1p and a unique lipid binding specificity that is also required for its function; VPS501 has paralog VPS5 that arose from the whole genome duplication","termid":"PBO:0113542"}


id: GO:0160108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process whose specific outcome is the progression of a gross anatomical part of an animal from an initial immature state, to a later, more mature state.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal gross anatomical part developmental process","synonyms":[{"name":"animal development","type":"related"}],"termid":"GO:0160108"}


id: PBO:0070259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 4, pseudogene","termid":"PBO:0070259"}


id: PBO:0056530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA-acyl carrier protein transacylase","termid":"PBO:0056530"}


id: PBO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor 1","termid":"PBO:0060662"}


id: PBO:0080295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 59 pseudogene","termid":"PBO:0080295"}


id: PBO:0056301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 pseudogene","termid":"PBO:0056301"}


id: GO:0038012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which internalization of a Wnt receptor stops, prevents, or reduces the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["PMID:17908284","PMID:19643732","GOC:bf","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt signaling pathway by Wnt receptor internalization (obsolete GO:0038012)","synonyms":[{"name":"ligand-dependent internalization of Frizzled","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor endocytosis","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor internalization","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway by Wnt receptor internalization","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway by Wnt receptor internalization","type":"exact"}],"termid":"GO:0038012"}


id: GO:0004396
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70500,76508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008865"},{"annotations":[70501,76509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004340"},{"annotations":[76514,98359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate.","definition_xrefs":["EC:2.7.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"hexokinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22740","MetaCyc:HEXOKINASE-RXN"],"synonyms":[{"name":"ATP-dependent hexokinase activity","type":"related"},{"name":"ATP:D-hexose 6-phosphotransferase activity","type":"related"},{"name":"glucose ATP phosphotransferase activity","type":"related"},{"name":"hexokinase (phosphorylating)","type":"related"},{"name":"hexokinase D","type":"related"},{"name":"hexokinase type I activity","type":"narrow"},{"name":"hexokinase type II activity","type":"narrow"},{"name":"hexokinase type III activity","type":"narrow"},{"name":"hexokinase type IV","type":"related"},{"name":"hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"hexokinase type IV glucokinase activity","type":"related"}],"termid":"GO:0004396","terms_by_termid":{"GO:0004340":null,"GO:0008865":null,"GO:0019158":null}}


id: MONDO:0011258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchiootic syndrome in which the cause of the disease is a mutation in the EYA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiootic syndrome","termid":"MONDO:0018878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiootic syndrome 1","secondary_identifiers":["OMIM:602588","UMLS:C1865143","MEDGEN:351307"],"synonyms":[{"name":"BOS1","type":"related"},{"name":"EYA1 branchiootic syndrome","type":"exact"},{"name":"anterior segment anomalies with or without cataract","type":"related"},{"name":"bo syndrome 1","type":"related"},{"name":"branchiootic dysplasia","type":"related"},{"name":"branchiootic syndrome 1","type":"exact"},{"name":"branchiootic syndrome caused by mutation in EYA1","type":"exact"},{"name":"branchiootic syndrome type 1","type":"exact"}],"termid":"MONDO:0011258","xrefs":{"Monarch":{"xref_id":"0011258"}}}


id: FYPO:0007805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the ATP hydrolysis-dependent activity that loads H3-H4 histone dimers onto DNA is absent.","definition_xrefs":["PomBase:mah","PMID:31848341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal H3-H4 dimer loading onto DNA","termid":"FYPO:0007804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0005447","FYPO:0000661","FYPO:0000707","FYPO:0000641"],"is_obsolete":false,"name":"abolished H3-H4 dimer loading onto DNA","synonyms":[{"name":"abolished H3-H4 dimer loading activity","type":"exact"},{"name":"abolished histone H3-H4 dimer loading activity","type":"exact"}],"termid":"FYPO:0007805"}


id: MONDO:0020006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hematologic disease (obsolete MONDO:0020006)","termid":"MONDO:0020006","xrefs":{"Monarch":{"xref_id":"0020006"}}}


id: GO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hepatocyte during the development of the liver. Hepatocytes emerge from the hepatic epithelium, populating the septum transversum and lateral mesenchymal areas of the hepatic lobes.","definition_xrefs":["CL:0000182","PMID:9794819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte cell migration","termid":"GO:0002194"}


id: PBO:0055262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2689","termid":"PBO:0055262"}


id: PBO:0083523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RPL12B/YDR418W","termid":"PBO:0083523"}


id: MONDO:0035678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical Timothy syndrome with cutaneous syndactyly.","direct_ancestors":[{"relation_name":"is_a","term_name":"Timothy syndrome, classic type","termid":"MONDO:0021171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"Timothy syndrome type 1","secondary_identifiers":["ICD10CM:I49.8","Orphanet:595098","UMLS:C5574939","GARD:22380","MEDGEN:1802409"],"synonyms":[{"name":"LQT8 type 1","type":"exact"},{"name":"TS1","type":"exact"}],"termid":"MONDO:0035678","xrefs":{"Monarch":{"xref_id":"0035678"}}}


id: PBO:0045709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double zinc ribbon and ankyrin repeat domains 1","termid":"PBO:0045709"}


id: PBO:0029376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_double-strand_break_processing","termid":"PBO:0029376"}


id: PBO:0065554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 3","termid":"PBO:0065554"}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: FYPO:0001034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tunicamycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to tunicamycin","synonyms":[{"name":"resistance to tunicamycin during mitotic cell cycle","type":"related"},{"name":"resistance to tunicamycin during vegetative growth","type":"exact"},{"name":"resistant to TM","type":"exact"},{"name":"resistant to tunicamycin","type":"exact"}],"termid":"FYPO:0001034"}


id: MONDO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dracunculiasis (obsolete MONDO:0005735)","termid":"MONDO:0005735","xrefs":{"Monarch":{"xref_id":"0005735"}}}


id: PBO:0089084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm4","termid":"PBO:0089084"}


id: GO:0008470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanoyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = 3-methyl-(2E)-butenoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["RHEA:12276","PMID:25450250","PMID:7640268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acyl-CoA dehydrogenase activity","termid":"GO:0016937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-methylbutanoyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.4","MetaCyc:RXN0-2301","Reactome:R-HSA-70745","Reactome:R-HSA-9914837"],"synonyms":[{"name":"3-methylbutanoyl-CoA:(acceptor) oxidoreductase activity","type":"related"},{"name":"3-methylbutanoyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"isovaleroyl-coenzyme A dehydrogenase activity","type":"related"},{"name":"isovaleryl-CoA dehydrogenase activity","type":"exact"},{"name":"isovaleryl-coenzyme A dehydrogenase activity","type":"related"}],"termid":"GO:0008470"}


id: GO:0070260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 5'-phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between DNA topoisomerase II and DNA.","definition_xrefs":["PMID:16751265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"5'-tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070260"}


id: PBO:0076676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 1","termid":"PBO:0076676"}


id: PATO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A speed which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"speed","termid":"PATO:0000008"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased speed","synonyms":[{"name":"slow","type":"exact"},{"name":"slow speed","type":"exact"}],"termid":"PATO:0000304"}


id: PBO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon beta subunit Sbh1 (predicted)","termid":"PBO:0004508"}


id: GO:1901908
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine hexaphosphate.","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"diadenosine hexaphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"diadenosine hexaphosphate metabolism","type":"exact"},{"name":"diadenosyl hexaphosphate metabolic process","type":"exact"},{"name":"diadenosyl hexaphosphate metabolism","type":"exact"}],"termid":"GO:1901908","terms_by_termid":{"GO:1901909":null}}


id: GO:0102739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A36 + O2 + 2-oxoglutarate = H+ + gibberellin A4 + succinate + 2 carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (gibberellin-36), 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102739)","termid":"GO:0102739"}


id: MONDO:0007371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornea guttata with anterior polar cataracts","secondary_identifiers":["MESH:C535471","OMIM:121390","UMLS:C1852558","MEDGEN:338956"],"synonyms":[{"name":"cornea guttata with anterior polar cataract","type":"related"},{"name":"cornea guttata with anterior polar cataracts","type":"exact"},{"name":"familial congenital cornea guttata with anterior polar cataracts (type)","type":"related"}],"termid":"MONDO:0007371","xrefs":{"Monarch":{"xref_id":"0007371"}}}


id: GO:0047382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-3-phospho-1-thio-D-glycerate + H2O = S-methyl-1-thio-D-glycerate + phosphate.","definition_xrefs":["RHEA:16081","EC:3.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"methylphosphothioglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R04317","MetaCyc:3.1.3.14-RXN"],"synonyms":[{"name":"S-methyl-3-phospho-1-thio-D-glycerate phosphohydrolase activity","type":"related"},{"name":"methylthiophosphoglycerate phosphatase activity","type":"related"}],"termid":"GO:0047382"}


id: MOD:01963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine.","definition_xrefs":["PubMed:23030644","RESID:AA0607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DATDGlc) serine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-serine","type":"exact"},{"name":"O-[N,N-diacetylbacillosaminyl]serine","type":"exact"},{"name":"O-[N2,N4-diacetylbacillosaminyl]serine","type":"exact"}],"termid":"MOD:01963"}


id: GO:1905939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gonad development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gonad development","synonyms":[{"name":"regulation of gonadogenesis","type":"exact"}],"termid":"GO:1905939"}


id: MONDO:0012321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 7q36.","definition_xrefs":["PMID:16175510","DOID:0110043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 10","secondary_identifiers":["MESH:C566465","GARD:16514","OMIM:609636","UMLS:C1864828","MEDGEN:351228"],"synonyms":[{"name":"AD10","type":"exact"},{"name":"Ad10","type":"related"},{"name":"Alzheimer disease 10","type":"exact"},{"name":"Alzheimer disease familial 10","type":"exact"},{"name":"Alzheimer disease type 10","type":"exact"},{"name":"Alzheimer disease, familial, 10","type":"related"},{"name":"Alzheimer disease-10","type":"exact"},{"name":"Alzheimer's disease 10","type":"exact"},{"name":"Alzheimer's disease type 10","type":"exact"}],"termid":"MONDO:0012321","xrefs":{"Monarch":{"xref_id":"0012321"}}}


id: PBO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transporter Str3","termid":"PBO:0000119"}


id: GO:0070350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of white fat cell proliferation","synonyms":[{"name":"regulation of white adipocyte proliferation","type":"exact"},{"name":"regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070350"}


id: GO:0022834
data:
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id: GO:0007085
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id: PBO:0084942
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id: GO:0010656
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id: PBO:0114218
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id: PBO:0011099
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id: MONDO:0000741
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id: MONDO:0009338
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id: GO:0031982
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id: PBO:0081044
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id: GO:0035113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the appendage are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic appendage morphogenesis","termid":"GO:0035113"}


id: PBO:0065783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 3","termid":"PBO:0065783"}


id: PBO:0091229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dienelactone hydrolase family, implicated in cellular detoxification","termid":"PBO:0091229"}


id: GO:0033484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitric oxide within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitric oxide homeostasis","synonyms":[{"name":"NO homeostasis","type":"broad"},{"name":"cellular nitric oxide homeostasis","type":"exact"},{"name":"nitric oxide homeostasis","type":"broad"}],"termid":"GO:0033484"}


id: PBO:0068382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 183","termid":"PBO:0068382"}


id: PBO:0058328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4701","termid":"PBO:0058328"}


id: PBO:0073728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 9","termid":"PBO:0073728"}


id: PBO:0005900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine, mitochondrial","termid":"PBO:0005900"}


id: PBO:0083186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene CTS2/YDR371W; identified by expression profiling and mass spectrometry","termid":"PBO:0083186"}


id: PBO:0059480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moesin","termid":"PBO:0059480"}


id: PBO:0113336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant displays elevated frequency of mitochondrial genome loss; localizes to mitochondria, cytosol and to the peroxisome in a Pex5p-dependent manner in glucose","termid":"PBO:0113336"}


id: PBO:0078149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 27","termid":"PBO:0078149"}


id: PATO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male receptivity","termid":"PATO:0001721"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male receptivity","synonyms":[{"name":"low male receptivity","type":"exact"}],"termid":"PATO:0001726"}


id: SO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo to which new deoxyribonucleotides can be added by DNA polymerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_oligo","termid":"SO:0000441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_(molecular_biology)"],"synonyms":[{"name":"DNA primer","type":"exact"},{"name":"primer oligonucleotide","type":"exact"},{"name":"primer polynucleotide","type":"exact"},{"name":"primer sequence","type":"exact"}],"termid":"SO:0000112"}


id: MONDO:0021440
data:
  {"annotated_genes":["SJAG_02855","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02855":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign neoplasm of skin","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:2197","NCIT:C2896","SCTID:92384009","UMLS:C0004998","ICD9:216.8","ICD9:216.9"],"synonyms":[{"name":"benign cutaneous neoplasm","type":"exact"},{"name":"benign cutaneous tumor","type":"exact"},{"name":"benign cutaneous tumour","type":"exact"},{"name":"benign neoplasm of the skin","type":"exact"},{"name":"benign skin neoplasm","type":"exact"},{"name":"benign skin tumor","type":"exact"},{"name":"benign skin tumour","type":"exact"},{"name":"benign tumor of skin","type":"exact"},{"name":"benign tumor of the skin","type":"exact"},{"name":"benign tumour of skin","type":"exact"},{"name":"benign tumour of the skin","type":"exact"},{"name":"skin neoplasms, benign","type":"exact"},{"name":"zone of skin benign neoplasm","type":"exact"}],"termid":"MONDO:0021440","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0021440"}}}


