# terms

id: GO:0001179
data:
  {"annotated_genes":["SJAG_00202"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80229],"is_not":false,"summary":null,"term":"GO:0001179"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase I transcription factor, a protein required to initiate or regulate transcription by RNA polymerase I.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00202":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase I transcription factor binding","type":"broad"}],"termid":"GO:0001179","terms_by_termid":{"GO:0001179":null}}


id: PBO:0067155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 205, pseudogene","termid":"PBO:0067155"}


id: PBO:0091040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPANK1 ortholog","termid":"PBO:0091040"}


id: PBO:0073898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 4","termid":"PBO:0073898"}


id: MONDO:0015737
data:
  {"annotated_genes":["SJAG_03025","SJAG_03379","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[87083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[86228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","definition":"Typical nemaline myopathy is a moderate neonatal form of nemaline myopathy (NM) characterized by facial and skeletal muscle weakness and mild respiratory involvement.","definition_xrefs":["Orphanet:171436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03145":null,"SJAG_03379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"typical nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1806265","UMLS:C5680453","icd11.foundation:1105111633","GARD:12822"],"synonyms":[{"name":"typical congenital nemaline myopathy","type":"related"}],"termid":"MONDO:0015737","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012538":null},"xrefs":{"Monarch":{"xref_id":"0015737"}}}


id: MONDO:0002316
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495","SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87423,87422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[86858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"}]},"cv_name":"mondo","definition":"Inflammation or degeneration of the peripheral motor nerves.","definition_xrefs":["NCIT:C3500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"motor peripheral neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2477","MEDGEN:82885","ICD9:356.9","MESH:D015417","NCIT:C75467","SCTID:95663000","UMLS:C0271683"],"synonyms":[{"name":"HSMN","type":"narrow"},{"name":"HSMN - hereditary sensory and motor neuropathy","type":"narrow"},{"name":"hereditary motor and sensory neuropathy","type":"narrow"},{"name":"neuropathic muscular atrophy","type":"related"},{"name":"peripheral motor neuropathy","type":"exact"}],"termid":"MONDO:0002316","terms_by_termid":{"MONDO:0011002":null,"MONDO:0011534":null},"xrefs":{"Monarch":{"xref_id":"0002316"}}}


id: PBO:0065936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 2","termid":"PBO:0065936"}


id: PBO:0089433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Hhp2","termid":"PBO:0089433"}


id: PBO:0062756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 1","termid":"PBO:0062756"}


id: MONDO:0004272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculosis that involves the urinary bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder tuberculosis","secondary_identifiers":["ICD9:016.14","ICD9:016.10","MEDGEN:509075","DOID:754","ICD9:016.1","SCTID:32268008","UMLS:C0152793"],"synonyms":[{"name":"bladder tuberculosis","type":"related"},{"name":"bladder tuberculous","type":"exact"},{"name":"tuberculosis of bladder","type":"exact"},{"name":"tuberculosis of bladder, unspecified examination","type":"exact"},{"name":"tuberculous cystitis","type":"exact"},{"name":"urinary bladder tuberculosis","type":"exact"}],"termid":"MONDO:0004272","xrefs":{"Monarch":{"xref_id":"0004272"}}}


id: MONDO:0800204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calvarial doughnut lesions with bone fragility and spondylometaphyseal dysplasia","secondary_identifiers":["UMLS:C5193004","MEDGEN:1674505"],"synonyms":[{"name":"CDLSMD","type":"exact"}],"termid":"MONDO:0800204","xrefs":{"Monarch":{"xref_id":"0800204"}}}


id: FYPO:0001484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chemical response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to a nutrient is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to nutrient","synonyms":[{"name":"abnormal cellular response to nutrient during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to nutrient during vegetative growth","type":"exact"}],"termid":"FYPO:0001484"}


id: MONDO:0032818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with cerebellar hypoplasia and spasticity","secondary_identifiers":["UMLS:C5231415","MEDGEN:1684815","OMIM:618572"],"synonyms":[{"name":"NEDCHS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR HYPOPLASIA AND SPASTICITY","type":"related"}],"termid":"MONDO:0032818","xrefs":{"Monarch":{"xref_id":"0032818"}}}


id: PBO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 26","termid":"PBO:0080040"}


id: PBO:0066698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 5 homolog A","termid":"PBO:0066698"}


id: PBO:0047772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box B1","termid":"PBO:0047772"}


id: PBO:0084687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial component of the ERMES complex; links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084687"}


id: GO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiotic process mediated by secreted substance (obsolete GO:0052047)","synonyms":[{"name":"interaction with other organism via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with other organism via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052047"}


id: GO:0003872
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78215],"is_not":false,"summary":null,"term":"GO:0003872"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose-6-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"6-phosphofructokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70467","RHEA:16109","MetaCyc:6PFRUCTPHOS-RXN"],"synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"},{"name":"6-phosphofructose 1-kinase activity","type":"related"},{"name":"ATP-dependent phosphofructokinase activity","type":"related"},{"name":"ATP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PFK","type":"related"},{"name":"fructose 6-phosphate kinase activity","type":"related"},{"name":"fructose 6-phosphokinase activity","type":"related"},{"name":"nucleotide triphosphate-dependent phosphofructokinase activity","type":"related"},{"name":"phospho-1,6-fructokinase activity","type":"related"},{"name":"phosphofructokinase (phosphorylating)","type":"related"},{"name":"phosphofructokinase I activity","type":"related"},{"name":"phosphohexokinase activity","type":"broad"}],"termid":"GO:0003872","terms_by_termid":{"GO:0003872":null}}


id: MONDO:0012124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden infant death with dysgenesis of the testes (SIDDT) syndrome is a lethal condition in infants with dysgenesis of testes.","definition_xrefs":["Orphanet:168593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden infant death-dysgenesis of the testes syndrome","secondary_identifiers":["GARD:12382","MESH:C563856","UMLS:C1837371","MEDGEN:332428","OMIM:608800"],"synonyms":[{"name":"SIDDT","type":"exact"},{"name":"sudden infant death - dysgenesis of the testes","type":"related"},{"name":"sudden infant death with dysgenesis of the testes syndrome","type":"related"}],"termid":"MONDO:0012124","xrefs":{"Monarch":{"xref_id":"0012124"}}}


id: GO:0090655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a junction formed at the point where double-stranded telomeric DNA becomes a single-stranded G-rich telomeric DNA 3' overhang.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:bhm","GOC:nc","PMID:21852327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand/single-strand DNA junction binding","termid":"GO:0000406"},{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"double-stranded/single-stranded junction telomeric DNA binding","termid":"GO:0090655"}


id: MONDO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm arising from the wall of the colon.","definition_xrefs":["NCIT:C2894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"},{"relation_name":"is_a","term_name":"benign neoplasm of large intestine","termid":"MONDO:0021444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign colon neoplasm","secondary_identifiers":["ICD9:211.3","MEDGEN:525","UMLS:C0004991","MONDO:0021466","SCTID:92065004","DOID:235"],"synonyms":[{"name":"benign colon neoplasm","type":"exact"},{"name":"benign colon tumor","type":"exact"},{"name":"benign colon tumour","type":"exact"},{"name":"benign colonic neoplasm","type":"exact"},{"name":"benign colonic tumor","type":"exact"},{"name":"benign colonic tumour","type":"exact"},{"name":"benign neoplasm of colon","type":"exact"},{"name":"benign neoplasm of the colon","type":"exact"},{"name":"benign tumor of colon","type":"exact"},{"name":"benign tumor of the colon","type":"exact"},{"name":"benign tumour of colon","type":"exact"},{"name":"benign tumour of the colon","type":"exact"},{"name":"colon benign neoplasm","type":"exact"},{"name":"colon neoplasm","type":"broad"},{"name":"colonic Mass","type":"exact"},{"name":"colonic benign neoplasm","type":"related"},{"name":"colonic tumor","type":"broad"},{"name":"colonic tumour","type":"broad"}],"termid":"MONDO:0002278","xrefs":{"Monarch":{"xref_id":"0002278"}}}


id: PBO:0016559
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Rna Binding protein","termid":"PBO:0016559"}


id: MONDO:0859330
data:
  {"annotated_genes":["SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85952],"is_not":false,"summary":null,"term":"MONDO:0859330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774268","MEDGEN:1824041","OMIM:620154"],"termid":"MONDO:0859330","terms_by_termid":{"MONDO:0859330":null},"xrefs":{"Monarch":{"xref_id":"0859330"}}}


id: GO:0005715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in pachytene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"late recombination nodule","termid":"GO:0005715"}


id: MONDO:0018462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Angelman syndrome","termid":"MONDO:0007113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome due to imprinting defect in 15q11-q13","secondary_identifiers":["Orphanet:411515","UMLS:C5681834","GARD:21733","MEDGEN:1826135"],"termid":"MONDO:0018462","xrefs":{"Monarch":{"xref_id":"0018462"}}}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: PBO:0026903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ribonucleotide_incorporation_on_leading_strand","termid":"PBO:0026903"}


id: GO:2001187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001187"}


id: FYPO:0005962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sodium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sodium import","synonyms":[{"name":"abnormal cellular sodium import","type":"exact"},{"name":"abnormal sodium import across plasma membrane","type":"exact"},{"name":"abnormal sodium import during mitotic cell cycle","type":"related"},{"name":"abnormal sodium import during vegetative growth","type":"exact"},{"name":"abnormal sodium import into cell","type":"exact"},{"name":"abnormal sodium ion import","type":"exact"}],"termid":"FYPO:0005962"}


id: FYPO:0006225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tetramethylammonium. Cells stop growing (and may die) at a concentration of tetramethylammonium that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tetramethylammonium","synonyms":[{"name":"hypersensitive to tetramethylammonium","type":"exact"},{"name":"sensitive to TMA","type":"exact"},{"name":"sensitive to tetramethylammonium during mitotic cell cycle","type":"related"},{"name":"sensitive to tetramethylammonium during vegetative growth","type":"exact"}],"termid":"FYPO:0006225"}


id: PBO:0087807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Target membrane receptor (t-SNARE); for vesicular intermediates traveling between the Golgi apparatus and the vacuole; controls entry of biosynthetic, endocytic, and retrograde traffic into the prevacuolar compartment; syntaxin","termid":"PBO:0087807"}


id: GO:1903574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cellular response to amino acid starvation.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:11381086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"},{"relation_name":"negatively_regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to amino acid starvation","synonyms":[{"name":"down regulation of cellular response to amino acid starvation","type":"exact"},{"name":"down-regulation of cellular response to amino acid starvation","type":"exact"},{"name":"downregulation of cellular response to amino acid starvation","type":"exact"},{"name":"inhibition of cellular response to amino acid starvation","type":"narrow"}],"termid":"GO:1903574"}


id: FYPO:0006344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the plasma membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to plasma membrane during vegetative growth","synonyms":[{"name":"ectopic protein localization to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalised to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006344"}


id: MOD:01258
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:314#C","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-methylmaleimide - site C","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01258"}


id: PBO:0083337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized gene YGL108C","termid":"PBO:0083337"}


id: GO:0018543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-amino-2-hydroxylamino-6-nitrotoluene + NADP+ = NADPH + H+ + 4-amino-2-nitroso-6-nitrotoluene.","definition_xrefs":["UM-BBD_reactionID:r0464"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-amino-2-nitroso-6-nitrotoluene reductase activity (obsolete GO:0018543)","termid":"GO:0018543"}


id: PBO:0079700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubinuclein 1","termid":"PBO:0079700"}


id: FYPO:0005588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphoinositide measured in a cell is lower than normal. A phosphoinositide is any phosphatidylinositol that is phosphorylated at one or more of the hydroxy groups of inositol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"},{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphoinositide level","synonyms":[{"name":"decreased PI accumulation","type":"related"},{"name":"decreased cellular PI level","type":"related"},{"name":"decreased cellular phosphoinositide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphoinositide level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphoinositide level","type":"exact"}],"termid":"FYPO:0005588"}


id: PBO:0044302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 5","termid":"PBO:0044302"}


id: GO:0035875
data:
  {"annotated_genes":["SJAG_03926","SJAG_04126","SJAG_03989","SJAG_01805","SJAG_00229","SJAG_01082","SJAG_03681","SJAG_00600","SJAG_01601","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116291,113616,104864,99481,94159,102158,101635,108197,114172,114887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the centromeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["GOC:vw","PMID:1708436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion, centromeric","termid":"GO:0051754"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of meiotic sister chromatid cohesion, centromeric","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:0035875","terms_by_termid":{"GO:1990813":null}}


id: GO:1902236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:20160352","GOC:rl","GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902235"},{"relation_name":"is_a","term_name":"negative regulation of response to endoplasmic reticulum stress","termid":"GO:1903573"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of ER stress-induced apoptosis","type":"exact"},{"name":"down regulation of apoptosis in response to ER stress","type":"exact"},{"name":"down regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"down regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress-induced apoptosis","type":"exact"},{"name":"down-regulation of apoptosis in response to ER stress","type":"exact"},{"name":"down-regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"down-regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress-induced apoptosis","type":"exact"},{"name":"downregulation of apoptosis in response to ER stress","type":"exact"},{"name":"downregulation of apoptosis triggered by ER stress","type":"exact"},{"name":"downregulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress-induced apoptosis","type":"narrow"},{"name":"inhibition of apoptosis in response to ER stress","type":"narrow"},{"name":"inhibition of apoptosis triggered by ER stress","type":"narrow"},{"name":"inhibition of endoplasmic reticulum stress-induced apoptosis","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress-induced apoptosis","type":"exact"},{"name":"negative regulation of apoptosis in response to ER stress","type":"exact"},{"name":"negative regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"negative regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902236"}


id: PBO:0089634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive DNA-binding transcription factor Prr1","termid":"PBO:0089634"}


id: PBO:0051287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-35 (pseudogene)","termid":"PBO:0051287"}


id: PBO:0042373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1","termid":"PBO:0042373"}


id: PBO:0039020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFTPH divergent transcript","termid":"PBO:0039020"}


id: FYPO:0000542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein transport is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased rate of protein transport during vegetative growth","synonyms":[{"name":"increased rate of protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: increased rate","type":"related"}],"termid":"FYPO:0000542"}


id: PBO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40","termid":"PBO:0071794"}


id: FYPO:0003491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to UV during mitotic G1 phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"hypersensitive to UV during mitotic G1 phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic G1 phase","type":"exact"},{"name":"sensitive to UV during G1 phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during G1 phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003491"}


id: PBO:0074274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen like 1","termid":"PBO:0074274"}


id: GO:0051398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of a lysine residue from the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["GOC:ai","PMID:12799365"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal lysine aminopeptidase activity (obsolete GO:0051398)","synonyms":[{"name":"N-terminal lysine aminopeptidase activity","type":"exact"},{"name":"lysine aminopeptidase activity","type":"broad"},{"name":"lysyl aminopeptidase activity","type":"broad"}],"termid":"GO:0051398"}


id: MONDO:0006352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenoid cystic carcinoma that arises from the paranasal sinuses. It usually has an aggressive clinical course characterized by high recurrence rates and distant metastases.","definition_xrefs":["NCIT:C6019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus adenoid cystic carcinoma","secondary_identifiers":["MEDGEN:233840","UMLS:C1335337"],"synonyms":[{"name":"accessory sinus adenoid cystic carcinoma","type":"exact"},{"name":"adenoid cystic carcinoma of accessory sinus","type":"exact"},{"name":"adenoid cystic carcinoma of paranasal sinus","type":"exact"},{"name":"adenoid cystic carcinoma of the accessory sinus","type":"exact"},{"name":"adenoid cystic carcinoma of the paranasal sinus","type":"exact"},{"name":"paranasal sinus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006352","xrefs":{"Monarch":{"xref_id":"0006352"}}}


id: MONDO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb duplication, polydactyly, syndactyly, and/or hyperphalangy (obsolete MONDO:0017434)","secondary_identifiers":["icd11.foundation:1911144861","Orphanet:294959"],"termid":"MONDO:0017434","xrefs":{"Monarch":{"xref_id":"0017434"}}}


id: GO:0070184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-tRNA aminoacylation","termid":"GO:0006437"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006520","GO:0140053","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"mitochondrial tyrosyl-tRNA aminoacylation","termid":"GO:0070184"}


id: GO:2000454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000452"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000454"}


id: PBO:0085275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal integral membrane protein; involved in negative regulation of peroxisome size; partially functionally redundant with Pex31p; genetic interactions suggest action at a step downstream of steps mediated by Pex28p and Pex29p","termid":"PBO:0085275"}


id: PR:O94682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis20 gene.","definition_xrefs":["UniProtKB:O94682","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C776.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.16","synonyms":[{"name":"Spom972h-mis20","type":"exact"}],"termid":"PR:O94682"}


id: PBO:0056906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoguardin 1","termid":"PBO:0056906"}


id: MOD:00805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminoglucosyl)-L-serine.","definition_xrefs":["PubMed:3086323","RESID:AA0398","PubMed:8404891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) serine","type":"exact"},{"name":"CARBOHYD O-linked (HexNAc)","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylamino)glucosyl-L-serine","type":"exact"},{"name":"O-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylglucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O3-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"OGlcNAcSer","type":"exact"}],"termid":"MOD:00805"}


id: GO:2000681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transport.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transport (obsolete GO:2000681)","synonyms":[{"name":"negative regulation of Rb+ transport","type":"exact"},{"name":"negative regulation of rubidium cation transport","type":"exact"}],"termid":"GO:2000681"}


id: PBO:0062794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orosomucoid 2","termid":"PBO:0062794"}


id: PBO:0085801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains transmembrane domains; involved in secretion of proteins that lack classical secretory signal sequences; component of the detergent-insoluble glycolipid-enriched complexes (DIGs); NCE102 has a paralog, FHN1, that arose from the whole genome duplication","termid":"PBO:0085801"}


id: MONDO:0011388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical cancer (obsolete MONDO:0011388)","synonyms":[{"name":"cervical cancer","type":"related"}],"termid":"MONDO:0011388","xrefs":{"Monarch":{"xref_id":"0011388"}}}


id: PR:O14018
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02129","PANTHER:PTHR11778:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.15","secondary_identifiers":["UniProtKB:O14018"],"synonyms":[{"name":"SerRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SARS","type":"exact"},{"name":"seryl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"seryl-tRNA(Ser/Sec) synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14018"}


id: PBO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036258"}


id: PBO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific GPI anchored protein family","termid":"PBO:0000069"}


id: FYPO:0004941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains a lower amount of mannose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio.","definition_xrefs":["PMID:11015724","PMID:8782411","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0003290","FYPO:0002494"],"is_obsolete":false,"name":"decreased mannose level in glycoprotein glycan","synonyms":[{"name":"decreased mannose level in glycoprotein oligosaccharide","type":"related"},{"name":"reduced mannose level in glycoprotein glycan","type":"exact"}],"termid":"FYPO:0004941"}


id: GO:0140510
data:
  {"annotated_genes":["SJAG_01584","SJAG_03200","SJAG_00680","SJAG_04578","SJAG_01745","SJAG_04148","SJAG_04284","SJAG_03729","SJAG_01374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91690,116427,90480,96479,116802,91301,110807,110841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140599"},{"annotations":[94196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140511"}]},"cv_name":"cellular_component","definition":"A narrow constricted region of the nucleus that forms around the anaphase spindle during closed mitosis, and connects the main portions of the newly forming daughter nuclei.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear bridge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear bridge","type":"broad"}],"termid":"GO:0140510","terms_by_termid":{"GO:0140511":null,"GO:0140599":null}}


id: MONDO:0010832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 3","secondary_identifiers":["DOID:0110125","MEDGEN:347179","GARD:822","MESH:C537911","OMIM:600151","UMLS:C1859564"],"synonyms":[{"name":"BBS3","type":"exact"},{"name":"Bardet-Biedl syndrome 3","type":"exact"},{"name":"Bardet-Biedl syndrome type 3","type":"exact"}],"termid":"MONDO:0010832","xrefs":{"Monarch":{"xref_id":"0010832"}}}


id: PBO:0044581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 3","termid":"PBO:0044581"}


id: GO:0047284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl D-xylosyl phosphate + protein = dolichol-phosphate + D-xylosylprotein.","definition_xrefs":["MetaCyc:2.4.2.33-RXN","EC:2.4.2.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"dolichyl-xylosyl-phosphate-protein xylosyltransferase activity","secondary_identifiers":["RHEA:18361"],"synonyms":[{"name":"dolichyl-D-xylosyl-phosphate:protein D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047284"}


id: PBO:0066781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 79","termid":"PBO:0066781"}


id: MONDO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tubular type adenoma of the breast in which, during pregnancy and lactation, the epithelial cells show extensive secretory changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenoma","termid":"MONDO:0002058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy adenoma","secondary_identifiers":["UMLS:C1266023","MEDGEN:226830","NCIT:C9473","DOID:7539","ICDO:8204/0"],"synonyms":[{"name":"Lactating adenoma","type":"exact"},{"name":"Lactating adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004271","xrefs":{"Monarch":{"xref_id":"0004271"}}}


id: PBO:0069333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 592, pseudogene","termid":"PBO:0069333"}


id: MONDO:0021003
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"A disease characterized by the presence of polydactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"polydactyly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57774","MESH:D017689","OMIM:603596","NCIT:C87110","UMLS:C0152427","HP:0010442","DOID:1148","ICD9:755.0","SCTID:367506006","MedDRA:10036063","ICD9:755.00"],"synonyms":[{"name":"hyperdactyly","type":"exact"},{"name":"polydactylism","type":"exact"},{"name":"polydactyly","type":"exact"},{"name":"polydactyly (disease)","type":"exact"},{"name":"postaxial polydactyly","type":"related"},{"name":"supernumerary digit","type":"related"}],"termid":"MONDO:0021003","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0021003"}}}


id: GO:0015469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A toxin that exerts its effects by forming a channel in a membrane that allows the unregulated passage of substances into and out of the cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete channel-forming toxin activity (obsolete GO:0015469)","synonyms":[{"name":"channel-forming toxin activity","type":"exact"}],"termid":"GO:0015469"}


id: PBO:0043674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1B","termid":"PBO:0043674"}


id: GO:0007451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between dorsal and ventral compartments that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["GOC:bf","PMID:10625531","PMID:9374402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc lineage restriction","termid":"GO:0035161"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation, imaginal disc","termid":"GO:0007450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral lineage restriction, imaginal disc","synonyms":[{"name":"dorsal-ventral lineage restriction, imaginal disc","type":"exact"},{"name":"dorsoventral lineage restriction, imaginal disc","type":"exact"}],"termid":"GO:0007451"}


id: GO:1990463
data:
  {"annotated_genes":["SJAG_04947","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100453,104893],"is_not":false,"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"A protein complex that is anchored at the cortical face of the plasma membrane, and contains proteins involved in regulating cell cycle progression. In Schizosaccharomyces pombe, lateral cortical nodes are several megadaltons in size, and contain Slf1, which anchors the complex at the membrane, and the methyltransferase Skb1 in stoichiometric quantities, and may contain other proteins.","definition_xrefs":["PMID:25009287","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"lateral cell cortex","termid":"GO:0097575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node","type":"exact"}],"termid":"GO:1990463","terms_by_termid":{"GO:1990463":null}}


id: GO:0018695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-cresol + acceptor + H2O = 4-hydroxybenzaldehyde + reduced acceptor.","definition_xrefs":["EC:1.17.9.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-cresol dehydrogenase (hydroxylating) activity","secondary_identifiers":["MetaCyc:1.17.99.1-RXN","RHEA:15141","UM-BBD_reactionID:r0272"],"synonyms":[{"name":"4-cresol dehydrogenase activity","type":"exact"},{"name":"4-cresol:acceptor oxidoreductase (methyl-hydroxylating)","type":"related"},{"name":"p-cresol methylhydroxylase activity","type":"related"},{"name":"p-cresol-(acceptor) oxidoreductase (hydroxylating) activity","type":"related"}],"termid":"GO:0018695"}


id: PBO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Sty1","termid":"PBO:0000204"}


id: PBO:0048874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A5 pseudogene 1","termid":"PBO:0048874"}


id: PBO:0051227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-20-1 (pseudogene)","termid":"PBO:0051227"}


id: PBO:0036425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, domain associated with Mpn1 in some fungi","termid":"PBO:0036425"}


id: PBO:0069345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 605, pseudogene","termid":"PBO:0069345"}


id: GO:0046818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A location in the host cell nucleus where viral proteins colocalize late in infection prior to the onset of viral DNA synthesis. More than one site can be present simultaneously.","definition_xrefs":["PMID:10233976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"dense nuclear body","termid":"GO:0046818"}


id: GO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)acetaldehyde oxime = (indol-3-yl)acetonitrile + H2O.","definition_xrefs":["RHEA:23156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indoleacetaldoxime dehydratase activity","secondary_identifiers":["EC:4.8.1.3","KEGG_REACTION:R04093","MetaCyc:RXN-19838"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"3-indoleacetaldoxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldoxime hydro-lyase activity","type":"exact"},{"name":"indoleacetaldoxime hydro-lyase activity","type":"exact"}],"termid":"GO:0047720"}


id: PBO:0111763
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone fold","termid":"PBO:0111763"}


id: GO:0010097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires stamen or staminode identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of stamen identity","termid":"GO:0010097"}


id: PBO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR48 family Bun107","termid":"PBO:0000346"}


id: GO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"positively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070109"}


id: PBO:0079876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 3","termid":"PBO:0079876"}


id: PBO:0070158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 72 pseudogene","termid":"PBO:0070158"}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: GO:0072098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the kidney along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in kidney development","synonyms":[{"name":"anterior/posterior pattern formation involved in kidney development","type":"related"},{"name":"kidney anterior/posterior pattern formation","type":"related"},{"name":"kidney anterior/posterior pattern specification","type":"exact"}],"termid":"GO:0072098"}


id: GO:1900698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"regulation of o-orsellinic acid formation","type":"exact"},{"name":"regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900698"}


id: GO:0045503
data:
  {"annotated_genes":["SJAG_02561"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77713],"is_not":false,"summary":null,"term":"GO:0045503"}]},"cv_name":"molecular_function","definition":"Binding to a light chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"dynein light chain binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0045503","terms_by_termid":{"GO:0045503":null}}


id: GO:0033854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-arogenate = L-glutamate + prephenate.","definition_xrefs":["RHEA:22880","EC:2.6.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate-prephenate aminotransferase activity","secondary_identifiers":["MetaCyc:PREPHENATE-TRANSAMINE-RXN","KEGG_REACTION:R07276"],"synonyms":[{"name":"L-arogenate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-glutamate:prephenate aminotransferase activity","type":"related"},{"name":"PAT","type":"related"},{"name":"prephenate transaminase activity","type":"broad"}],"termid":"GO:0033854"}


id: GO:0034143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"regulation of TLR4 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034143"}


id: PBO:0049799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5","termid":"PBO:0049799"}


id: PBO:0066717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 14","termid":"PBO:0066717"}


id: GO:0120267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the pellicle, a structure enclosing some parasite cells such as certain apicomplexa and Euglenozoa. These membranes are associated with an infrastructure of microtubules, microfilaments, and other organelles.","definition_xrefs":["PMID:7175771","GOC:ach","PMID:30550896","GOC:krc","PMID:18095354","PMID:6993644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"pellicular membrane","synonyms":[{"name":"pellicle membrane","type":"exact"},{"name":"pellicular plasma membrane","type":"exact"}],"termid":"GO:0120267"}


id: MONDO:1012281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, pig","secondary_identifiers":["OMIA:001016-9823"],"termid":"MONDO:1012281","xrefs":{"Monarch":{"xref_id":"1012281"}}}


id: PBO:0030966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation","termid":"PBO:0030966"}


id: MONDO:0000878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the retina by cytomegalovirus characterized by retinal necrosis, hemorrhage, vessel sheathing, and retinal edema. Cytomegalovirus retinitis is a major opportunistic infection in aids patients and can cause blindness.","definition_xrefs":["MESH:D017726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis","termid":"MONDO:0002708"},{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"},{"relation_name":"is_a","term_name":"viral eye infection","termid":"MONDO:0020950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cytomegalovirus retinitis","secondary_identifiers":["NCIT:C50521","UMLS:C0206178","MEDGEN:61532","DOID:0080160","EFO:1001302","GARD:9531","SCTID:22455005"],"synonyms":[{"name":"CMV retinitis","type":"exact"},{"name":"Cytomegaloviral Retinitis","type":"exact"},{"name":"Cytomegalovirus caused retinitis","type":"exact"},{"name":"Cytomegalovirus retinitis","type":"exact"},{"name":"Retinitis, Cytomegaloviral","type":"exact"},{"name":"cytomegalovirus retinitis","type":"exact"}],"termid":"MONDO:0000878","xrefs":{"Monarch":{"xref_id":"0000878"}}}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: MONDO:0042484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"},{"relation_name":"is_a","term_name":"sporotrichosis","termid":"MONDO:0005968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disseminated sporotrichosis","secondary_identifiers":["MEDGEN:547522","UMLS:C0276725","SCTID:91051003","icd11.foundation:984175752"],"synonyms":[{"name":"disseminated sporotrichosis","type":"exact"}],"termid":"MONDO:0042484","xrefs":{"Monarch":{"xref_id":"0042484"}}}


id: MONDO:0015582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of pregnancy disorder that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare disorder related with pregnancy, childbirth and puerperium (obsolete MONDO:0015582)","secondary_identifiers":["Orphanet:163637"],"synonyms":[{"name":"rare pregnancy disorder","type":"exact"}],"termid":"MONDO:0015582","xrefs":{"Monarch":{"xref_id":"0015582"}}}


id: GO:0010433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a bract are generated and organized. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["GOC:tb","PMID:16554366","PO:0009055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"bract development","termid":"GO:0010432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract morphogenesis","termid":"GO:0010433"}


id: PBO:0050150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 6","termid":"PBO:0050150"}


id: MONDO:0010939
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85709],"is_not":false,"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"Low phospholipid associated cholelithiasis is a rare genetic hepatic disease characterized by cholesterol gallstones and intrahepatic stones developing before the age of 40 years.","definition_xrefs":["Orphanet:69663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"},{"relation_name":"is_a","term_name":"hereditary gallbladder disorder","termid":"MONDO:0700225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"low phospholipid associated cholelithiasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16683","MedDRA:10068936","icd11.foundation:1261516421","MEDGEN:760527","SCTID:715577009","UMLS:C2609268","OMIM:600803"],"synonyms":[{"name":"ABCB4 gene mutation-associated cholelithiasis","type":"exact"},{"name":"GBD1","type":"related"},{"name":"LPAC","type":"exact"},{"name":"cholelithiasis with ABCB4 gene mutation","type":"exact"},{"name":"cholelithiasis, Low phospholipid-associated","type":"related"},{"name":"gallbladder disease 1","type":"related"},{"name":"gallbladder disease type 1","type":"exact"}],"termid":"MONDO:0010939","terms_by_termid":{"MONDO:0010939":null},"xrefs":{"Monarch":{"xref_id":"0010939"}}}


id: SO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar amino acid encoded by the codons TGT and TGC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine","synonyms":[{"name":"C","type":"exact"},{"name":"Cys","type":"exact"}],"termid":"SO:0001447"}


id: MONDO:0005903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the sac surrounding the heart (pericardium) due to mycobacterium tuberculosis infection. Pericarditis can lead to swelling (pericardial effusion), compression of the heart (cardiac tamponade), and preventing normal beating of the heart.","definition_xrefs":["MESH:D010495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"pericarditis","termid":"MONDO:0005904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pericardial tuberculosis","secondary_identifiers":["DOID:4962","MEDGEN:18379","ICD9:017.90","EFO:0007426","UMLS:C0031049","SCTID:67256000"],"synonyms":[{"name":"tuberculous pericarditis","type":"exact"}],"termid":"MONDO:0005903","xrefs":{"Monarch":{"xref_id":"0005903"}}}


id: PBO:0004302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttlingfactor (predicted)","termid":"PBO:0004302"}


id: GO:1990064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the ground tissue.","definition_xrefs":["PMID:23444357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground tissue pattern formation","synonyms":[{"name":"ground tissue patterning","type":"exact"}],"termid":"GO:1990064"}


id: PBO:0071471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 12","termid":"PBO:0071471"}


id: PBO:0116194
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EG5","termid":"PBO:0116194"}


id: PBO:0063339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 4","termid":"PBO:0063339"}


id: PBO:0070584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 50","termid":"PBO:0070584"}


id: FYPO:0005242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on glutamine nitrogen source","synonyms":[{"name":"decreased growth on glutamine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on glutamine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with glutamine nitrogen source","type":"narrow"},{"name":"reduced cell growth on glutamine nitrogen source","type":"exact"},{"name":"slow cell growth on glutamine nitrogen source","type":"narrow"}],"termid":"FYPO:0005242"}


id: PBO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in","termid":"PBO:0034145"}


id: PBO:0040860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliverdin reductase B","termid":"PBO:0040860"}


id: MONDO:0007932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An age related macular degeneration conferred by variation in the ABCA4 gene on chromosome 1p22.","definition_xrefs":["PMID:10396622","DOID:0110015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 2","secondary_identifiers":["MESH:C562479","UMLS:C3495438","MEDGEN:501183","OMIM:153800"],"synonyms":[{"name":"ARMD2","type":"exact"},{"name":"age related macular degeneration type 2","type":"exact"},{"name":"macular Degeneration, Senile","type":"related"},{"name":"macular Degeneration, age-related, type 2","type":"exact"},{"name":"macular degeneration, age-related, 2","type":"related"},{"name":"maculopathy, age-related, 2","type":"related"}],"termid":"MONDO:0007932","xrefs":{"Monarch":{"xref_id":"0007932"}}}


id: MONDO:0958123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated pulmonary artery sling","secondary_identifiers":["Orphanet:658574"],"termid":"MONDO:0958123","xrefs":{"Monarch":{"xref_id":"0958123"}}}


id: MONDO:0044768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant extra-adrenal parasympathetic paraganglioma arising from paraganglia in the vagus nerve. Patients may present with a slow growing, painless mass in the neck, hoarseness, vocal cord paralysis, and dysphagia.","definition_xrefs":["NCIT:C8427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagus nerve neoplasm","termid":"MONDO:0001608"},{"relation_name":"is_a","term_name":"head and neck paraganglioma","termid":"MONDO:0006239"},{"relation_name":"is_a","term_name":"parasympathetic paraganglioma","termid":"MONDO:0021052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve paraganglioma","secondary_identifiers":["MEDGEN:141635","SCTID:253030004","GARD:8620","UMLS:C0474819"],"synonyms":[{"name":"paraganglioma of the vagal body","type":"exact"},{"name":"paraganglioma of the vagus nerve","type":"exact"},{"name":"paraganglioma of vagal body","type":"exact"},{"name":"paraganglioma of vagus nerve","type":"exact"},{"name":"vagal body paraganglioma","type":"exact"},{"name":"vagal paraganglioma","type":"exact"},{"name":"vagus nerve paraganglioma","type":"exact"}],"termid":"MONDO:0044768","xrefs":{"Monarch":{"xref_id":"0044768"}}}


id: GO:0046998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6R)-2-acetyl-6-(3-acetyl-2,4,6-trihydroxy-5-methylphenyl)-3-hydroxy-6-methylcyclohexa-2,4-dien-1-one + NAD+ = (S)-usnate + 2 H+ + NADH.","definition_xrefs":["EC:1.1.1.199","RHEA:21876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-usnate reductase activity","secondary_identifiers":["KEGG_REACTION:R07345","MetaCyc:1.1.1.199-RXN"],"synonyms":[{"name":"L-usnic acid dehydrogenase activity","type":"related"},{"name":"reduced-(S)-usnate:NAD+ oxidoreductase (ether-bond-forming)","type":"related"}],"termid":"GO:0046998"}


id: GO:0014030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a mesenchymal cell.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell fate commitment","termid":"GO:0014030"}


id: MOD:00541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 9x(13)C labeled L-phosphotyrosine.","definition_xrefs":["Unimod:185","PubMed:12716131"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O4'-phospho-L-tyrosine","termid":"MOD:00048"},{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-phosphotyrosine","synonyms":[{"name":"C13 label (Phosphotyrosine)","type":"related"},{"name":"Label:13C(9)+Phospho","type":"related"}],"termid":"MOD:00541"}


id: GO:1905443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","PMID:15533940","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of clathrin coat assembly","synonyms":[{"name":"regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905443"}


id: PBO:0055393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2823","termid":"PBO:0055393"}


id: PBO:0076101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 6","termid":"PBO:0076101"}


id: PBO:0057521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 639","termid":"PBO:0057521"}


id: PBO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 8","termid":"PBO:0045139"}


id: PBO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 6","termid":"PBO:0045648"}


id: PBO:0057506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 624","termid":"PBO:0057506"}


id: GO:0097105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["PMID:15797875","PMID:18550748","GOC:pr","GOC:sjp","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"presynaptic membrane organization","termid":"GO:0097090"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"presynaptic membrane assembly","synonyms":[{"name":"pre-synaptic membrane assembly","type":"exact"}],"termid":"GO:0097105"}


id: GO:0046462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monoacylglycerol metabolic process","synonyms":[{"name":"monoacylglycerol metabolism","type":"exact"},{"name":"monoglyceride metabolic process","type":"exact"},{"name":"monoglyceride metabolism","type":"exact"}],"termid":"GO:0046462"}


id: PBO:0056332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 13","termid":"PBO:0056332"}


id: GO:0033044
data:
  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id: MONDO:0022208
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id: GO:0099638
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  {"annotated_genes":["SJAG_04609","SJAG_02282","SJAG_01809","SJAG_04565","SJAG_03915","SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91650,95261,101492,113177,113392,119280],"is_not":false,"summary":null,"term":"GO:0099638"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endosome to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_03915":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endosome to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099638","terms_by_termid":{"GO:0099638":null}}


id: GO:0009223
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  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide catabolic process","termid":"GO:0006244"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"deoxyribonucleotide catabolic process","termid":"GO:0009264"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine deoxyribonucleotide breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleotide catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleotide degradation","type":"exact"}],"termid":"GO:0009223","terms_by_termid":{"GO:0046081":null}}


id: GO:0072356
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id: GO:0120279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cytoplasmic, non-membranous RNA/protein complex aggregate in the primordial germ cells that are distinct from, but colocalize with or are adjacent to, P granules and mutator foci and are associated with RNA metabolism. Z granules have been observed in C. elegans.","definition_xrefs":["GOC:dr","GOC:krc","PMID:29769721","PMID:31378614","PMID:32650583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"germ plasm","termid":"GO:0060293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Z granule","synonyms":[{"name":"germline granule","type":"broad"}],"termid":"GO:0120279"}


id: PBO:0090815
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP6 regulatory subunit Ekc1","termid":"PBO:0090815"}


id: FYPO:0001721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sodium export","synonyms":[{"name":"abnormal cellular sodium export","type":"exact"},{"name":"abnormal sodium export during mitotic cell cycle","type":"related"},{"name":"abnormal sodium export during vegetative growth","type":"exact"},{"name":"abnormal sodium export from cell","type":"exact"},{"name":"abnormal sodium ion export","type":"exact"}],"termid":"FYPO:0001721"}


id: GO:0071699
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the olfactory placode are generated and organized. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"ectodermal placode morphogenesis","termid":"GO:0071697"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode morphogenesis","termid":"GO:0071699"}


id: PR:Q10057
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein disulfide-isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide-isomerase C1F5.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.02","secondary_identifiers":["UniProtKB:Q10057"],"synonyms":[{"name":"Spom972h-P4HB","type":"exact"}],"termid":"PR:Q10057"}


id: PBO:0046634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 15","termid":"PBO:0046634"}


id: MONDO:0011335
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  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86041],"is_not":false,"summary":null,"term":"MONDO:0011335"}]},"cv_name":"mondo","definition":"A rare disorder caused by mutation in the KIF22 gene. It is characterized by short stature, midface retrusion, progressive knee malalignment, generalized ligamentous laxity, and mild spinal deformity.","definition_xrefs":["NCIT:C125419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with multiple dislocations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:93360","OMIM:603546","GARD:9866","DOID:0112199","MEDGEN:350960","MESH:C535784","SCTID:766820007","UMLS:C1863732"],"synonyms":[{"name":"SEMD-MD","type":"exact"},{"name":"SEMDJL2","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, Hall type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, leptodactylic type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxicity, Hall type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity type 2","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, leptodactylic type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations Hall type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations leptodactylic type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations, Hall type","type":"exact"}],"termid":"MONDO:0011335","terms_by_termid":{"MONDO:0011335":null},"xrefs":{"Monarch":{"xref_id":"0011335"}}}


id: PBO:0027339
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-cysteine_ligase_activity","termid":"PBO:0027339"}


id: MONDO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by nematode larvae which never develop into the adult stage and migrate through various body tissues. They commonly infect the skin, eyes, and viscera in humans. Ancylostoma brasiliensis causes cutaneous larva migrans. Toxocara causes visceral larva migrans.","definition_xrefs":["MESH:D007815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nematoda infectious disease","secondary_identifiers":["UMLS:C0027583","MEDGEN:45025","EFO:0007391","MESH:D009349","MONDO:0021556","SCTID:84706005"],"synonyms":[{"name":"Disease due to Nematoda","type":"related"},{"name":"Infection, Nematode","type":"related"},{"name":"Infections, Nematode","type":"related"},{"name":"Nematoda caused disease or disorder","type":"exact"},{"name":"Nematoda disease or disorder","type":"exact"},{"name":"Nematode Infection","type":"related"},{"name":"Nematode Infections","type":"related"},{"name":"Nematode infection","type":"related"},{"name":"Nematodiasis","type":"related"},{"name":"disease due to nematoda","type":"exact"},{"name":"nematode infection","type":"related"},{"name":"nematodiasis","type":"related"}],"termid":"MONDO:0005871","xrefs":{"Monarch":{"xref_id":"0005871"}}}


id: MONDO:0013518
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined pituitary hormone deficiencies, genetic form in which the cause of the disease is a mutation in the OTX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"pituitary hormone deficiency, combined, 6","secondary_identifiers":["MEDGEN:462790","GARD:16520","OMIM:613986","UMLS:C3151440"],"synonyms":[{"name":"CPHD6","type":"related"},{"name":"OTX2 combined pituitary hormone deficiencies, genetic form","type":"exact"},{"name":"combined pituitary hormone deficiencies, genetic form caused by mutation in OTX2","type":"exact"},{"name":"pituitary hormone deficiency, combined, 6","type":"exact"},{"name":"pituitary hormone deficiency, combined, type 6","type":"exact"}],"termid":"MONDO:0013518","xrefs":{"Monarch":{"xref_id":"0013518"}}}


id: PBO:0048029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1","termid":"PBO:0048029"}


id: PBO:0045370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 5","termid":"PBO:0045370"}


id: FYPO:0007167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is normal (i.e. indistinguishable from wild type) during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"normal protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"normal protein localisation to cell cortex during prophase I","type":"exact"}],"termid":"FYPO:0007167"}


id: PR:A6X982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.13c gene.","definition_xrefs":["UniProtKB:A6X982","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15D4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.13c","synonyms":[{"name":"Spom972h-SPBC15D4.13c","type":"exact"}],"termid":"PR:A6X982"}


id: SO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of bacterial chromosome replication.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriC","synonyms":[{"name":"origin of bacterial chromosome replication","type":"exact"}],"termid":"SO:0000953"}


id: PBO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1 (predicted)","termid":"PBO:0002718"}


id: PBO:0064334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 4","termid":"PBO:0064334"}


id: MONDO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary lymphoma of the skin composed of various numbers of small and large irregular neoplastic follicle center cells. Its morphologic pattern can be nodular, diffuse, or nodular and diffuse. It presents with solitary or grouped plaques and tumors, and it usually involves the scalp, forehead, or trunk. It rarely involves the legs. This type of cutaneous lymphoma tends to remain localized to the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous B-cell lymphoma","termid":"MONDO:0015819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous follicle center lymphoma","secondary_identifiers":["SCTID:404143002","UMLS:C1333171","GARD:13701","NCIT:C7217","icd11.foundation:77501812","Orphanet:178540","ICDO:9597/3","ONCOTREE:PCFCL","MEDGEN:234180"],"synonyms":[{"name":"Crosti's disease","type":"exact"},{"name":"PCFCL","type":"exact"},{"name":"Reticulohistiocytoma of the dorsum","type":"exact"},{"name":"cutaneous follicle center lymphoma","type":"exact"},{"name":"cutaneous follicle centre lymphoma","type":"exact"}],"termid":"MONDO:0015814","xrefs":{"Monarch":{"xref_id":"0015814"}}}


id: GO:0031308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear outer membrane (obsolete GO:0031308)","synonyms":[{"name":"intrinsic to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031308"}


id: MONDO:0100421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly GATA1 gene mutation. (A change in the nucleotide sequence of the GATA1 gene.)","definition_xrefs":["NCIT:C82340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, GATA1 gene mutation","synonyms":[{"name":"AML, ERYF1 Gene Mutation","type":"exact"},{"name":"AML, GATA Binding Protein 1 Gene Mutation","type":"exact"},{"name":"AML, GATA-1 Gene Mutation","type":"exact"},{"name":"AML, GATA1 Mutation","type":"exact"},{"name":"AML, GATA1 gene mutation","type":"exact"},{"name":"AML, GF-1 Gene Mutation","type":"exact"},{"name":"AML, GF1 Gene Mutation","type":"exact"},{"name":"AML, NF-E1 Gene Mutation","type":"exact"},{"name":"AML, NFE1 Gene Mutation","type":"exact"}],"termid":"MONDO:0100421","xrefs":{"Monarch":{"xref_id":"0100421"}}}


id: PBO:0078817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 1-1","termid":"PBO:0078817"}


id: PR:Q92360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G9.15c gene.","definition_xrefs":["UniProtKB:Q92360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.15c","synonyms":[{"name":"Spom972h-SPAC6G9.15c","type":"exact"}],"termid":"PR:Q92360"}


id: PBO:0067183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 241, pseudogene","termid":"PBO:0067183"}


id: PBO:0039746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein M","termid":"PBO:0039746"}


id: PBO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 4","termid":"PBO:0062023"}


id: GO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 4 production","termid":"GO:0071643"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"positive regulation of CCL4 production","type":"exact"},{"name":"positive regulation of MIP-1b production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071645"}


id: PBO:0029733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_papulacandin_D","termid":"PBO:0029733"}


id: GO:0000247
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92963],"is_not":false,"summary":null,"term":"GO:0000247"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: fecosterol = episterol.","definition_xrefs":["RHEA:33435","PMID:8988026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"C-8 sterol isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-203"],"synonyms":[{"name":"delta-8-delta-7 sterol isomerase activity","type":"exact"}],"termid":"GO:0000247","terms_by_termid":{"GO:0000247":null}}


id: GO:1903482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903482)","synonyms":[{"name":"activation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"activation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"positive regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903482"}


id: MONDO:0010321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, X-linked 1","secondary_identifiers":["OMIM:300425","UMLS:C1845540","MEDGEN:335205"],"synonyms":[{"name":"AUTSX1","type":"related"},{"name":"autism susceptibility, X-linked 1","type":"exact"},{"name":"autism, susceptibility to, X-linked 1","type":"exact"},{"name":"autism, susceptibility to, X-linked type 1","type":"exact"},{"name":"susceptibility to X-linked autism 1","type":"related"}],"termid":"MONDO:0010321","xrefs":{"Monarch":{"xref_id":"0010321"}}}


id: SO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Penelope is a subclass of non_LTR_retrotransposons (SO:0000189). Penelope retrotransposons contains structural features of TR, RT, EN, TR, terminal repeats which can be in tandem or inverse orientation in different Penelope copies. RT is reverse transcriptase. EN is endonuclease.","definition_xrefs":["PMID:23914310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Penelope_retrotransposon","synonyms":[{"name":"Penelope retrotransposon","type":"exact"},{"name":"RPP retrotransposon","type":"exact"}],"termid":"SO:0002290"}


id: GO:1901764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphinothricin.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphinothricin metabolic process","synonyms":[{"name":"phosphinothricin metabolism","type":"exact"}],"termid":"GO:1901764"}


id: PBO:0087237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sequence-specific DNA binding protein; binds to a sequence motif associated with distinct genomic hotspots of non-H2B protein ubiquitylation (ub-hotspots); interacts with Slx5p to recruit the Slx5-Slx8  SUMO-targeted Ub ligase (STUbL) complex to ub-hotspots; deletion prevents ub-hotspot formation and exacerbates heat sensitivity of cells deficient in Rpd3L histone deacetylase complex members; forms nuclear foci upon DNA replication stress","termid":"PBO:0087237"}


id: PBO:0117037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP6 antisense RNA 1","termid":"PBO:0117037"}


id: MONDO:0859260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Dworschak-Punetha neurodevelopmental syndrome","secondary_identifiers":["OMIM:619955","UMLS:C5677017","MEDGEN:1800957"],"termid":"MONDO:0859260","xrefs":{"Monarch":{"xref_id":"0859260"}}}


id: PBO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS6 pseudogene 1","termid":"PBO:0075315"}


id: GO:0009006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete siroheme synthase activity (obsolete GO:0009006)","synonyms":[{"name":"sirohaem synthase activity","type":"exact"},{"name":"siroheme synthase activity","type":"exact"}],"termid":"GO:0009006"}


id: PATO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000524 plant growth hormone sensitivity value (obsolete PATO:0000524)","termid":"PATO:0000524"}


id: GO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory system development","termid":"GO:0048880"}


id: PBO:0004613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor (predicted)","termid":"PBO:0004613"}


id: MONDO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADCY6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 8","secondary_identifiers":["MEDGEN:896058","GARD:18565","OMIM:616287","UMLS:C4225385"],"synonyms":[{"name":"ADCY6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS8","type":"related"},{"name":"lethal congenital contracture syndrome 8","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADCY6","type":"exact"},{"name":"lethal congenital contracture syndrome type 8","type":"exact"}],"termid":"MONDO:0014570","xrefs":{"Monarch":{"xref_id":"0014570"}}}


id: GO:0030554
data:
  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id: PBO:0083391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF AIM9/YER080W","termid":"PBO:0083391"}


id: PBO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 32","termid":"PBO:0050215"}


id: GO:0035396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-X-C motif) ligand 9.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035394"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"positive regulation of CXCL9 production","type":"exact"},{"name":"positive regulation of MIG production","type":"exact"}],"termid":"GO:0035396"}


id: PBO:0085594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern","termid":"PBO:0085594"}


id: PBO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6B","termid":"PBO:0042265"}


id: PBO:0001719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator protein Rif1","termid":"PBO:0001719"}


id: MONDO:0958343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autoinflammatory syndrome characterized by a chronic-relapsing course of the combination of pyogenic arthritis, pyoderma gangrenosum, acne, and hidradenitis suppurativa (which, in addition to axillae and inguinal folds, can be observed on the face, neck, scalp, back, and buttocks, among others). Typical age of onset is adolescence to young adulthood, with the different signs and symptoms appearing simultaneously or subsequently.","definition_xrefs":["Orphanet:641380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPASH syndrome","secondary_identifiers":["MEDGEN:1853140","UMLS:C5816787"],"termid":"MONDO:0958343","xrefs":{"Monarch":{"xref_id":"0958343"}}}


id: PATO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's having a short, stocky build.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stubby","termid":"PATO:0001643"}


id: MONDO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile arthritis due to defect in LACC1","secondary_identifiers":["GARD:16382","OMIM:618795"],"synonyms":[{"name":"JUVAR","type":"related"},{"name":"JUVENILE ARTHRITIS","type":"related"}],"termid":"MONDO:0032920","xrefs":{"Monarch":{"xref_id":"0032920"}}}


id: PBO:0079135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin associated factor X","termid":"PBO:0079135"}


id: GO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to paxillin and the FAK-related kinase Pyk2.","definition_xrefs":["PMID:11683411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-paxillin-Pyk2 complex","synonyms":[{"name":"ITGAV-ITGB3-PXN-PTK2b complex","type":"narrow"}],"termid":"GO:0071097"}


id: MONDO:0004326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the sphenoid sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"sphenoid sinus Schneiderian papilloma","termid":"MONDO:0004327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinus inverted papilloma","secondary_identifiers":["DOID:7678","NCIT:C6841","MEDGEN:236834","UMLS:C1336037"],"synonyms":[{"name":"inverted papilloma of sphenoid sinus","type":"exact"},{"name":"inverted papilloma of the sphenoid sinus","type":"exact"},{"name":"sphenoidal sinus inverted papilloma","type":"exact"}],"termid":"MONDO:0004326","xrefs":{"Monarch":{"xref_id":"0004326"}}}


id: PBO:0027638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_during_meiosis_I","termid":"PBO:0027638"}


id: PBO:0030504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bortezomib","termid":"PBO:0030504"}


id: GO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(+)-camphor metabolic process","synonyms":[{"name":"(+)-camphor metabolism","type":"exact"},{"name":"camphor metabolic process","type":"exact"},{"name":"camphor metabolism","type":"exact"}],"termid":"GO:0018882"}


id: SO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is di-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_dimethylation_site","synonyms":[{"name":"H3K27 di-methylation site","type":"exact"},{"name":"H3K27Me2","type":"related"}],"termid":"SO:0001726"}


id: PBO:0091407
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Swi5 independently of Rad57","termid":"PBO:0091407"}


id: MONDO:1012195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular squamous cell carcinoma, non-human animal","termid":"MONDO:1011812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, domestic cat","secondary_identifiers":["OMIA:000735-9685"],"termid":"MONDO:1012195","xrefs":{"Monarch":{"xref_id":"1012195"}}}


id: PBO:0082366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bacterially-derived sulfatase; required for use of alkyl- and aryl-sulfates as sulfur sources","termid":"PBO:0082366"}


id: MONDO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"rubeosis iridis","secondary_identifiers":["ICD9:364.42","DOID:14000","MEDGEN:488789","SCTID:51995000","UMLS:C0154916"],"termid":"MONDO:0001855","xrefs":{"Monarch":{"xref_id":"0001855"}}}


id: PBO:0047358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXL12 pseudogene 1","termid":"PBO:0047358"}


id: MONDO:1011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000494"],"termid":"MONDO:1011403","xrefs":{"Monarch":{"xref_id":"1011403"}}}


id: PBO:0080047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 20","termid":"PBO:0080047"}


id: MONDO:0012042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 8","secondary_identifiers":["UMLS:C1969482","MEDGEN:409841","OMIM:608462"],"synonyms":[{"name":"HSCR8","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0012042","xrefs":{"Monarch":{"xref_id":"0012042"}}}


id: PBO:0046186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO1 antisense RNA 1","termid":"PBO:0046186"}


id: MONDO:0100549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor of the liver, characterized by hyperplastic growth of hepatocytes and a central fibrovascular scar.","definition_xrefs":["PMID:23396642","PMID:35687520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"focal nodular hyperplasia","synonyms":[{"name":"FNH","type":"exact"},{"name":"focal nodular hyperplasia of the liver","type":"exact"},{"name":"hepatic focal nodular hyperplasia","type":"exact"}],"termid":"MONDO:0100549","xrefs":{"Monarch":{"xref_id":"0100549"}}}


id: PBO:0039091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase 2","termid":"PBO:0039091"}


id: PBO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3","termid":"PBO:0090035"}


id: PBO:0074098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 1","termid":"PBO:0074098"}


id: PATO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000812 odor acuity value (obsolete PATO:0000812)","termid":"PATO:0000812"}


id: MONDO:0008125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 5","secondary_identifiers":["MEDGEN:318994","OMIM:164800","DOID:0080083","MESH:C563503","UMLS:C1833909"],"synonyms":[{"name":"NDNC5","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 5","type":"related"},{"name":"nonsyndromic congenital nail disorder type 5","type":"exact"},{"name":"onycholysis, hereditary distal","type":"related"},{"name":"onycholysis, partial, with scleronychia","type":"related"}],"termid":"MONDO:0008125","xrefs":{"Monarch":{"xref_id":"0008125"}}}


id: GO:0102729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 6-oxocampestanol + O2 + NADPH = cathasterone + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxocampestanol hydroxylase activity (obsolete GO:0102729)","termid":"GO:0102729"}


id: PBO:0029633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_cell_growth","termid":"PBO:0029633"}


id: PBO:0084884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial serine protease; required for the processing of various mitochondrial proteins and maintenance of mitochondrial DNA and morphology; belongs to the rhomboid-GlpG superfamily of intramembrane peptidases","termid":"PBO:0084884"}


id: GO:0019871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"sodium channel regulator activity","termid":"GO:0017080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"sodium channel inhibitor activity","secondary_identifiers":["GO:0019868"],"termid":"GO:0019871"}


id: PBO:0069359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 619, pseudogene","termid":"PBO:0069359"}


id: PBO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit Cut14","termid":"PBO:0004246"}


id: MONDO:1010661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, non-human animal","termid":"MONDO:1010080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, horse","secondary_identifiers":["OMIA:001001-9796"],"termid":"MONDO:1010661","xrefs":{"Monarch":{"xref_id":"1010661"}}}


id: MONDO:0049223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta, type 19","secondary_identifiers":["OMIM:301014","UMLS:C4746956","DOID:0111847","MEDGEN:1648353"],"synonyms":[{"name":"OI19","type":"related"},{"name":"osteogenesis imperfecta, type XIX","type":"related"},{"name":"osteogenesis imperfecta, type XIX, X-linked recessive","type":"exact"}],"termid":"MONDO:0049223","xrefs":{"Monarch":{"xref_id":"0049223"}}}


id: PBO:0026700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_glutamine_nitrogen_source","termid":"PBO:0026700"}


id: PR:O94421
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf22 gene.","definition_xrefs":["UniProtKB:O94421","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.14c","synonyms":[{"name":"ATP-dependent helicase snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SWI/SNF complex subunit snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf22","type":"exact"}],"termid":"PR:O94421"}


id: PBO:0002824
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds HSE 5'-NGAANNTTCNNGAAN-3'","termid":"PBO:0002824"}


id: GO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Rho GDP-dissociation inhibitor protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-dissociation inhibitor binding","termid":"GO:0051021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Rho GDP-dissociation inhibitor binding","synonyms":[{"name":"Rho GDI binding","type":"exact"}],"termid":"GO:0051022"}


id: GO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + 2 [Fe(III)cytochrome c553] = 2 [Fe(II)cytochrome c553] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:16465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-lactate dehydrogenase (cytochrome c-553) activity","secondary_identifiers":["EC:1.1.2.5","MetaCyc:1.1.2.5-RXN"],"synonyms":[{"name":"(R)-lactate:ferricytochrome-c-553 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047051"}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: GO:0004590
data:
  {"annotated_genes":["SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74354],"is_not":false,"summary":null,"term":"GO:0004590"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + orotidine 5'-phosphate = CO2 + UMP.","definition_xrefs":["EC:4.1.1.23","RHEA:11596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"orotidine-5'-phosphate decarboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00965","MetaCyc:OROTPDECARB-RXN","Reactome:R-HSA-73564"],"synonyms":[{"name":"ODCase activity","type":"related"},{"name":"OMP decarboxylase activity","type":"related"},{"name":"OMP-DC","type":"related"},{"name":"OMPdcase activity","type":"related"},{"name":"UMP synthase activity","type":"related"},{"name":"orotate decarboxylase activity","type":"related"},{"name":"orotate monophosphate decarboxylase activity","type":"related"},{"name":"orotic decarboxylase activity","type":"related"},{"name":"orotidine 5'-phosphate decarboxylase activity","type":"related"},{"name":"orotidine monophosphate decarboxylase activity","type":"related"},{"name":"orotidine phosphate decarboxylase activity","type":"related"},{"name":"orotidine-5'-monophosphate decarboxylase activity","type":"related"},{"name":"orotidine-5'-phosphate carboxy-lyase (UMP-forming)","type":"related"},{"name":"orotidine-5'-phosphate carboxy-lyase activity","type":"related"},{"name":"orotidylic acid decarboxylase activity","type":"related"},{"name":"orotidylic decarboxylase activity","type":"related"},{"name":"orotodylate decarboxylase activity","type":"related"},{"name":"uridine 5'-monophosphate synthase activity","type":"related"}],"termid":"GO:0004590","terms_by_termid":{"GO:0004590":null}}


id: PBO:0073480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 1","termid":"PBO:0073480"}


id: PBO:0084073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase with similarity to translation release factors; together with binding partner Dom34p, facilitates ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, particularly in 3' UTRs; genetically implicated in mRNA no-go decay; HBS1 has a paralog, SKI7, that arose from the whole genome duplication","termid":"PBO:0084073"}


id: PBO:0058819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7976","termid":"PBO:0058819"}


id: PBO:0073981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 2","termid":"PBO:0073981"}


id: MONDO:0011954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 4","secondary_identifiers":["UMLS:C1842643","MEDGEN:334129","OMIM:608035"],"synonyms":[{"name":"CMM4","type":"exact"},{"name":"melanoma, cutaneous malignant, 4","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0011954","xrefs":{"Monarch":{"xref_id":"0011954"}}}


id: GO:0060108
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular matrix part that is a regularly spaced indentation in the outer cortical layer of the cuticle. The pattern of annular furrows corresponds to sites of invaginations in hypodermal cell membranes that, in turn, correspond to submembranous regions where actin microfilament bundles assemble early in lethargus, the first phase of the molting cycle in which activity and feeding decline.","definition_xrefs":["ISSN:15518507","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical layer of collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"annular furrow extracellular matrix","termid":"GO:0060108"}


id: GO:0097090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["PMID:19730411","GOC:BHF","GOC:sjp","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"presynaptic membrane organization","synonyms":[{"name":"pre-synaptic membrane organization","type":"exact"},{"name":"presynaptic membrane organisation","type":"exact"}],"termid":"GO:0097090"}


id: GO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bacterial-type plastid PEP RNA polymerase core enzyme, typically consisting of two alpha, one beta, one beta prime, and one double prime subunit.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial-type RNA polymerase core enzyme binding","termid":"GO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"plastid PEP RNA polymerase core enzyme binding","termid":"GO:0001052"}


id: GO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the amphid sensory organ.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell differentiation involved in amphid sensory organ development","termid":"GO:0003398"}


id: PBO:0084561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif","termid":"PBO:0084561"}


id: PBO:0066984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 287","termid":"PBO:0066984"}


id: GO:0033445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AGU codon-amino acid adaptor activity","synonyms":[{"name":"AGT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033445"}


id: GO:0034485
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108684],"is_not":false,"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4,5-trisphosphate) + H2O = 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4-bisphosphate) + phosphate.","definition_xrefs":["EC:3.1.3.86","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10036","Reactome:R-HSA-1675949","RHEA:25528"],"termid":"GO:0034485","terms_by_termid":{"GO:0034485":null}}


id: GO:0004310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 farnesyl diphosphate = diphosphate + presqualene diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete farnesyl-diphosphate farnesyltransferase activity (obsolete GO:0004310)","secondary_identifiers":["Reactome:R-HSA-191402","Reactome:R-HSA-191405"],"termid":"GO:0004310"}


id: PBO:0091838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0091838"}


id: GO:1905340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to kinetochore.","definition_xrefs":["PMID:22581055","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to kinetochore","synonyms":[{"name":"regulation of condensin localization to kinetochore","type":"narrow"},{"name":"regulation of protein localisation to kinetochore","type":"exact"}],"termid":"GO:1905340"}


id: PBO:0080784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 4","termid":"PBO:0080784"}


id: GO:0036294
data:
  {"annotated_genes":["SJAG_04018","SJAG_00642","SJAG_03345","SJAG_01585","SJAG_01150","SJAG_00221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110232,112099,117377,101582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[89618,116782],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"},{"relation_name":"is_a","term_name":"cellular response to oxygen levels","termid":"GO:0071453"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to decreased oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to lowered oxygen levels","type":"exact"}],"termid":"GO:0036294","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: GO:0072312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular epithelial cell. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"},{"relation_name":"part_of","term_name":"metanephric glomerular epithelium development","termid":"GO:0072244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}


id: MONDO:0025517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a shrimp food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete shrimp allergy (obsolete MONDO:0025517)","secondary_identifiers":["DOID:0040001"],"synonyms":[{"name":"allergy of shrimp food product","type":"exact"},{"name":"shrimp food product allergic disease","type":"exact"}],"termid":"MONDO:0025517","xrefs":{"Monarch":{"xref_id":"0025517"}}}


id: PBO:0058466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5195","termid":"PBO:0058466"}


id: GO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exonucleolytic digestion of a pre-rRNA molecule in the process to generate a mature rRNA molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic trimming involved in rRNA processing (obsolete GO:0000459)","synonyms":[{"name":"exonucleolytic trimming during rRNA processing","type":"related"}],"termid":"GO:0000459"}


id: PBO:0081057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 14","termid":"PBO:0081057"}


id: GO:0014744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle adaptation","synonyms":[{"name":"positive regulation of muscle plasticity","type":"related"}],"termid":"GO:0014744"}


id: PBO:0108695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein","termid":"PBO:0108695"}


id: MONDO:0014492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Woolly hair-palmoplantar keratoderma syndrome is a very rare, hereditary epidermal disorder characterized by hypotrichosis/wooly scalp hair, sparse body hair, eyelashes and eyebrows, leukonychia, and striate palmoplantar keratoderma (more severe on the soles than the palms), which progressively worsens with age. Pseudo ainhum of the fifth toes was also reported. Although wooly hair-palmoplantar keratoderma syndrome shares clinical similarities with both Naxos disease and Carvajal syndrome, cardiomyopathy is notably absent.","definition_xrefs":["Orphanet:420686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"wooly hair-palmoplantar keratoderma syndrome","secondary_identifiers":["DOID:0070554","GARD:17697","OMIM:616099","MEDGEN:863639","SCTID:764108000","UMLS:C4015202"],"synonyms":[{"name":"KWWH type IV","type":"exact"},{"name":"PPKWH","type":"related"},{"name":"keratoderma with woolly hair type IV","type":"exact"},{"name":"keratoderma with wooly hair type IV","type":"exact"},{"name":"palmoplantar keratoderma and woolly hair","type":"related"},{"name":"palmoplantar keratoderma and wooly hair","type":"related"},{"name":"woolly hair-palmoplantar hyperkeratosis syndrome","type":"exact"},{"name":"wooly hair-palmoplantar hyperkeratosis syndrome","type":"exact"}],"termid":"MONDO:0014492","xrefs":{"Monarch":{"xref_id":"0014492"}}}


id: PBO:0051959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR interacting domain containing 2","termid":"PBO:0051959"}


id: GO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of a non-coding RNA (ncRNA) molecule. In eukaryotes, substrates include nuclear non-coding RNAs such as precursors and a variety of incorrectly processed forms of snRNAs, snoRNAs, rRNAs, and tRNAs, as well as discarded RNA fragments which have been removed from ncRNA primary transcripts. Polyadenylation of precursors is often linked to termination of transcription, but polyadenylation of RNAs targeted for degradation may also occur post-transcriptionally. This polyadenylation is important both for 3'-end processing to produce mature ncRNA species and also for targeting incorrectly processed or discarded RNA molecules for degradation.","definition_xrefs":["PMID:16374505","PMID:16431988","PMID:15828860","GOC:krc","PMID:15935758","GOC:dgf","GOC:rn","PMID:18951092"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA polyadenylation (obsolete GO:0043629)","synonyms":[{"name":"non-coding RNA polyadenylation","type":"exact"}],"termid":"GO:0043629"}


id: MONDO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrophic cardiomyopathy (obsolete MONDO:0016324)","termid":"MONDO:0016324","xrefs":{"Monarch":{"xref_id":"0016324"}}}


id: FYPO:0005589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphatidylserine level","synonyms":[{"name":"normal cellular PS level","type":"exact"},{"name":"normal cellular phosphatidylserine accumulation","type":"related"},{"name":"normal cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylserine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005589"}


id: MONDO:0019493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult heart tumor refers to neoplasms of the heart that manifest in adults and generally present with a variety of non-specific manifestations (depending on tumor site and infiltration) such as weight loss, exhaustion, hemorrhagic pericardial effusion, heart failure, arrhythmias, and embolisms, or that can also be asymptomatic. In adults 75% of heart tumors are benign, with myxoma being the most common benign tumor (accounting for 50-70% of all primary heart tumors) and rhabdomyosarcoma comprising 75% of malignant heart tumors. Other malignant tumors of the heart include fibrosarcoma and leiomyosarcoma (see these terms).","definition_xrefs":["Orphanet:874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"primary adult heart tumor","secondary_identifiers":["SCTID:715403006","UMLS:C4275152","GARD:18709","ICD10CM:D15.1","MEDGEN:900582"],"synonyms":[{"name":"adult cardiac tumor","type":"exact"},{"name":"adult cardiac tumour","type":"exact"},{"name":"adult heart tumor","type":"exact"},{"name":"adult heart tumour","type":"exact"}],"termid":"MONDO:0019493","xrefs":{"Monarch":{"xref_id":"0019493"}}}


id: FYPO:0005309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K5 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005309"}


id: GO:0046938
data:
  {"annotated_genes":["SJAG_04516","SJAG_01351","SJAG_02599","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71229,93671,97371,108814],"is_not":false,"summary":null,"term":"GO:0046938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phytochelatin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cadystin biosynthetic process","type":"related"},{"name":"phytochelatin anabolism","type":"exact"},{"name":"phytochelatin biosynthesis","type":"exact"},{"name":"phytochelatin formation","type":"exact"},{"name":"phytochelatin synthesis","type":"exact"}],"termid":"GO:0046938","terms_by_termid":{"GO:0046938":null}}


id: PBO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Ybt1","termid":"PBO:0002529"}


id: GO:0106164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay.","definition_xrefs":["GOC:vw","PMID:30601114"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0106164)","termid":"GO:0106164"}


id: GO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"positively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion molecule production","termid":"GO:0060355"}


id: GO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mitotic cell cycle checkpoint that detects whether chromosome segregation is complete and negatively regulates cytokinesis following mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis after mitosis checkpoint (obsolete GO:0000078)","synonyms":[{"name":"cell morphogenesis checkpoint","type":"exact"},{"name":"cell shape checkpoint","type":"exact"}],"termid":"GO:0000078"}


id: PBO:0087364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific exo-1,3-beta-glucanase; contributes to ascospore thermoresistance; SPR1 has a paralog, EXG1, that arose from the whole genome duplication","termid":"PBO:0087364"}


id: FYPO:0003395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone, mediated by complex II, does not occur.","definition_xrefs":["GO:0006121","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular respiration","termid":"FYPO:0000562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"abolished mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"abolished succinate cytochrome c oxidoreductase","type":"related"},{"name":"abolished succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"mitochondrial electron transport, succinate to ubiquinone, abolished","type":"exact"}],"termid":"FYPO:0003395"}


id: FYPO:0006956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of deferrichrome measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular deferrichrome level","synonyms":[{"name":"increased cellular deferrichrome level during mitotic cell cycle","type":"related"},{"name":"increased cellular deferrichrome level during vegetative growth","type":"exact"},{"name":"increased cellular deferriferrichrome level","type":"exact"},{"name":"increased deferrichrome accumulation","type":"related"}],"termid":"FYPO:0006956"}


id: MONDO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade III neuroepithelial neoplasm composed of neoplastic, mature ganglion cells and anaplastic glial cells. The anaplastic changes in the glial component and high MIB-1 and TP53 labeling indices may indicate aggressive behavior. However, the correlation of histological anaplasia with clinical outcome is inconsistent. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioglioma","termid":"MONDO:0016733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic ganglioglioma","secondary_identifiers":["ONCOTREE:AGNG","MEDGEN:140906","Orphanet:251957","UMLS:C0431112","NCIT:C4717","ICDO:9505/3","GARD:10639"],"synonyms":[{"name":"AGNG","type":"related"}],"termid":"MONDO:0016734","xrefs":{"Monarch":{"xref_id":"0016734"}}}


id: PBO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family (predicted)","termid":"PBO:0004449"}


id: GO:0019183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which chloride ions may pass in response to histamine binding to the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel complex","termid":"GO:0034707"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"histamine-gated chloride channel complex","termid":"GO:0019183"}


id: MONDO:0013857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alar cleft, isolated","secondary_identifiers":["MEDGEN:766390","UMLS:C3553476","OMIM:614687"],"synonyms":[{"name":"alar cleft, isolated","type":"exact"}],"termid":"MONDO:0013857","xrefs":{"Monarch":{"xref_id":"0013857"}}}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["RHEA:15065","EC:3.5.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["KEGG_REACTION:R01425","MetaCyc:ACYLAGMATINE-AMIDASE-RXN"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: FYPO:0004710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed when the cell undergoes transition from G0 phase to G1 in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:19197239","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci","termid":"FYPO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during G0 to G1 transition","synonyms":[{"name":"increased number of Rad22 foci during G0 to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during cell cycle re-entry","type":"exact"},{"name":"increased number of Rad52 foci during cell quiescence to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during exit from cell quiescence","type":"exact"},{"name":"increased number of Rad52 foci during quiescence to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during recovery from quiescence","type":"exact"}],"termid":"FYPO:0004710"}


id: MONDO:0006512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of breast cancer that is estrogen-receptor positive","definition_xrefs":["EFO:1000649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"estrogen-receptor positive breast cancer","secondary_identifiers":["UMLS:C2938924","DOID:0060075","MEDGEN:1843470"],"synonyms":[{"name":"ER+ breast cancer","type":"exact"},{"name":"estrogen receptor positive breast cancer","type":"exact"},{"name":"oestrogen receptor positive breast cancer","type":"exact"}],"termid":"MONDO:0006512","xrefs":{"Monarch":{"xref_id":"0006512"}}}


id: GO:0071079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha2-beta1 integrin complex bound to the cartilage matrix protein chondroadherin.","definition_xrefs":["PMID:9281592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha2-beta1 integrin-chondroadherin complex","synonyms":[{"name":"ITGA2-ITGB1-CHAD complex","type":"narrow"}],"termid":"GO:0071079"}


id: PBO:0072953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase (putative)","termid":"PBO:0072953"}


id: GO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosterone","synonyms":[{"name":"response to corticosterone stimulus","type":"exact"}],"termid":"GO:0051412"}


id: PBO:0004329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic-spindle disanchored Msd1","termid":"PBO:0004329"}


id: PBO:0043234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 5","termid":"PBO:0043234"}


id: PATO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001115 impulse value (obsolete PATO:0001115)","termid":"PATO:0001115"}


id: MONDO:0003982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma that affects both breasts in a simultaneous or non-simultaneous manner.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bilateral breast carcinoma","secondary_identifiers":["NCIT:C8287","UMLS:C0281267","DOID:6741","MEDGEN:128977"],"synonyms":[{"name":"bilateral breast cancer","type":"broad"},{"name":"bilateral breast carcinoma","type":"exact"}],"termid":"MONDO:0003982","xrefs":{"Monarch":{"xref_id":"0003982"}}}


id: GO:1904019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an epithelial cell.","definition_xrefs":["PMID:19137015","GO_REF:0000085","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell apoptotic process","synonyms":[{"name":"epithelial cell apoptosis","type":"narrow"},{"name":"epitheliocyte apoptosis","type":"narrow"},{"name":"epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904019"}


id: MONDO:0019171
data:
  {"annotated_genes":["SJAG_03764","SJAG_04781","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85784,85783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014548"},{"annotations":[85782,85781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014550"},{"annotations":[87066,87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[87717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013367"}]},"cv_name":"mondo","definition":"A hereditary cardiac disease characterized by a prolongation of the QT interval at basal ECG and by a high risk of life-threatening arrhythmias.","definition_xrefs":["Orphanet:768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03764":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial long QT syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:101016","GARD:16547","MEDGEN:685787","icd11.foundation:1208831985","OMIMPS:192500","NORD:1675","NANDO:2200228","UMLS:C1141890","MedDRA:10057926","SCTID:442917000"],"synonyms":[{"name":"LQTS","type":"exact"},{"name":"Long QT Syndrome","type":"exact"},{"name":"Romano-Ward long QT syndrome","type":"exact"},{"name":"Romano-Ward syndrome","type":"exact"},{"name":"Ward-Romano syndrome","type":"exact"},{"name":"congenital long QT syndrome","type":"exact"},{"name":"familial long QT syndrome","type":"exact"},{"name":"hereditary long QT syndrome","type":"exact"}],"termid":"MONDO:0019171","terms_by_termid":{"MONDO:0013367":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0019171"}}}


id: PBO:0029616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029616"}


id: GO:1904292
data:
  {"annotated_genes":["SJAG_01528","SJAG_02244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77781,78430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERAD pathway.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01528":null,"SJAG_02244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of ERAD pathway","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of ER-associated degradation pathway","type":"related"},{"name":"regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904292","terms_by_termid":{"GO:1904293":null}}


id: GO:0110132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a CRISPR-cas system.","definition_xrefs":["PMID:30190307","PMID:30190308"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of CRISPR-cas system (obsolete GO:0110132)","termid":"GO:0110132"}


id: PBO:0045611
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 22 (pseudogene)","termid":"PBO:0045611"}


id: PBO:0039073
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 1","termid":"PBO:0039073"}


id: GO:0004398
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id: GO:0006400
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id: PBO:0047309
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas ligand","termid":"PBO:0047309"}


id: PBO:0065708
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylate synthase 7 pseudogene 1","termid":"PBO:0065708"}


id: PBO:0056835
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT3 antisense RNA 1","termid":"PBO:0056835"}


id: GO:0042925
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"benzoate transmembrane transporter activity","synonyms":[{"name":"benzoate transporter activity","type":"related"}],"termid":"GO:0042925"}


id: MONDO:0015244
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id: MONDO:0006119
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal marginal zone B-cell lymphoma of mucosa associated lymphoid tissue that arises from the breast as a primary tumor.","definition_xrefs":["NCIT:C35688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"breast mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["MEDGEN:234051","UMLS:C1332633"],"synonyms":[{"name":"breast MALT lymphoma","type":"exact"},{"name":"breast mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006119","xrefs":{"Monarch":{"xref_id":"0006119"}}}


id: MONDO:0800033
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTTQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTTQ","synonyms":[{"name":"MTTQ MELAS syndrome","type":"exact"}],"termid":"MONDO:0800033","xrefs":{"Monarch":{"xref_id":"0800033"}}}


id: PBO:0071204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 45","termid":"PBO:0071204"}


id: GO:0106147
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fraxetin.","definition_xrefs":["GOC:lr","PMID:29581584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fraxetin biosynthesis","termid":"GO:0106147"}


id: PBO:0004198
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-H (predicted)","termid":"PBO:0004198"}


id: PBO:0076583
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 8","termid":"PBO:0076583"}


id: GO:0010304
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II.","definition_xrefs":["GOC:mah","PMID:16157880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II catabolic process","synonyms":[{"name":"LHCII catabolism","type":"related"}],"termid":"GO:0010304"}


id: GO:0033815
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + benzoyl-CoA = 4 CoA + 3,5-dihydroxybiphenyl + 4 CO2.","definition_xrefs":["EC:2.3.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biphenyl synthase activity","secondary_identifiers":["RHEA:22292","MetaCyc:2.3.1.177-RXN"],"synonyms":[{"name":"BIS","type":"related"},{"name":"malonyl-CoA:benzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0033815"}


id: GO:0000216
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progression from M phase to G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete M/G1 transition of mitotic cell cycle (obsolete GO:0000216)","synonyms":[{"name":"M/G1 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0000216"}


id: PBO:0080853
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 2","termid":"PBO:0080853"}


id: GO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, and Rab3a (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2 complex","type":"narrow"}],"termid":"GO:0070356"}


id: PBO:0005702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shuttle craft like transcriptional regulator (predicted)","termid":"PBO:0005702"}


id: GO:0043549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kinase activity","termid":"GO:0043549"}


id: MONDO:0018789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete COL4A1 or COL4A2-related cerebral small vessel disease with ischemic tendency (obsolete MONDO:0018789)","secondary_identifiers":["Orphanet:477762"],"synonyms":[{"name":"COL4A1 or COL4A2-related cerebral angiopathy with ischemic tendency","type":"exact"}],"termid":"MONDO:0018789","xrefs":{"Monarch":{"xref_id":"0018789"}}}


id: PBO:0049446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucoside xylosyltransferase 1","termid":"PBO:0049446"}


id: MONDO:0003728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the breast. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:C5185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast fibrosarcoma","secondary_identifiers":["MEDGEN:272385","DOID:6001","UMLS:C1332630"],"synonyms":[{"name":"breast fibrosarcoma","type":"exact"},{"name":"breast fibrosarcoma (disease)","type":"exact"},{"name":"fibrosarcoma of breast","type":"exact"},{"name":"fibrosarcoma of the breast","type":"exact"}],"termid":"MONDO:0003728","xrefs":{"Monarch":{"xref_id":"0003728"}}}


id: PBO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds STREP motif","termid":"PBO:0000899"}


id: PBO:0058239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4527","termid":"PBO:0058239"}


id: FYPO:0004507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation does not occur at the centromeric regions. The remainder of the sister chromatids may or may not separate.","definition_xrefs":["PMID:18362178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished centromeric DNA separation","synonyms":[{"name":"abolished DNA separation at centromere","type":"exact"},{"name":"abolished centromeric DNA separation during mitosis","type":"exact"},{"name":"abolished centromeric DNA separation during mitotic cell cycle","type":"related"},{"name":"abolished centromeric DNA separation during vegetative growth","type":"exact"},{"name":"abolished mitotic centromeric DNA separation","type":"exact"},{"name":"abolished mitotic sister chromatid separation at centromere","type":"exact"},{"name":"abolished segregation of centromeric DNA","type":"related"},{"name":"abolished sister kinetochore separation","type":"related"}],"termid":"FYPO:0004507"}


id: MONDO:0023142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal brain disruption sequence","termid":"MONDO:0023142","xrefs":{"Monarch":{"xref_id":"0023142"}}}


id: PBO:0086308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains a putative Stb5p binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0086308"}


id: PBO:0042591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 4","termid":"PBO:0042591"}


id: PBO:0068513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 104, pseudogene","termid":"PBO:0068513"}


id: GO:0051610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serotonin into a cell, typically presynaptic neurons or glial cells. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"serotonin uptake","synonyms":[{"name":"5-HT uptake","type":"exact"},{"name":"5-hydroxytryptamine uptake","type":"exact"},{"name":"5HT uptake","type":"exact"},{"name":"serotonin import","type":"exact"}],"termid":"GO:0051610"}


id: GO:0016020
data:
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id: MONDO:0011669
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome including neonatal and infantile hypotonia and failure to thrive, cystinuria type 1 and nephrolithiasis, growth retardation due to growth hormone deficiency, and minor facial dysmorphism.","definition_xrefs":["Orphanet:163690"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hypotonia-cystinuria syndrome","secondary_identifiers":["icd11.foundation:1852649756","MESH:C564710","UMLS:C1848030","GARD:16998","DOID:0060858","icd11.foundation:1742079513","OMIM:606407","SCTID:721173005","Orphanet:238517","MEDGEN:341133"],"synonyms":[{"name":"HCS","type":"exact"},{"name":"cystinuria with mitochondrial disease","type":"exact"},{"name":"homozygous 2P16 deletion syndrome","type":"related"},{"name":"homozygous 2P16 deletion syndrome, formerly","type":"related"},{"name":"homozygous 2P21 deletion syndrome","type":"related"},{"name":"hypotonia-cystinuria syndrome","type":"exact"},{"name":"hypotonia-cystinuria syndrome type 1","type":"exact"},{"name":"hypotonia-cystinuria type 1 syndrome","type":"exact"}],"termid":"MONDO:0011669","xrefs":{"Monarch":{"xref_id":"0011669"}}}


id: MONDO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete herpes simplex virus keratitis (obsolete MONDO:0000876)","termid":"MONDO:0000876","xrefs":{"Monarch":{"xref_id":"0000876"}}}


id: PBO:0017031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GEMIN7 ortholog","termid":"PBO:0017031"}


id: PBO:0108891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 4","termid":"PBO:0108891"}


id: GO:0141009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism in which mRNAs transcribed from transposons are targeted for degradation by a Piwi-associated RNA (piRNA).","definition_xrefs":["PMID:22121019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"},{"relation_name":"is_a","term_name":"transposable element silencing by mRNA destabilization","termid":"GO:0141008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"transposable element silencing by piRNA-mediated mRNA destabilization","synonyms":[{"name":"piRNA-mediated post-transcriptional retrotransposon silencing","type":"exact"},{"name":"piRNA-mediated retrotransposon silencing by mRNA destabilization","type":"narrow"}],"termid":"GO:0141009"}


id: PBO:0063351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNX4 divergent transcript","termid":"PBO:0063351"}


id: FYPO:0000800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a substance released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of substance in growth medium","synonyms":[{"name":"increased accumulation of substance in growth medium","type":"related"},{"name":"increased level of substance in growth medium","type":"exact"},{"name":"increased release of substance into growth medium","type":"related"}],"termid":"FYPO:0000800"}


id: GO:0051827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring on or near the exterior of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development on or near surface of other organism during symbiotic interaction (obsolete GO:0051827)","synonyms":[{"name":"growth or development on or near surface of other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0051827"}


id: GO:0052093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiotic cellular or anatomical structure for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of specialized structure for nutrient acquisition","synonyms":[{"name":"formation by organism of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation of specialized structure for nutrient acquisition from host","type":"exact"}],"termid":"GO:0052093"}


id: MOD:01124
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldohexosyl lysyl","termid":"MOD:01124"}


id: PATO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constricted","secondary_identifiers":["PATO:0001837"],"synonyms":[{"name":"stenosis","type":"exact"},{"name":"stenotic","type":"exact"},{"name":"stricture","type":"exact"}],"termid":"PATO:0001847"}


id: PBO:0040001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 13B","termid":"PBO:0040001"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["UniProtKB:O13781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: PR:G2TRU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf15 gene.","definition_xrefs":["UniProtKB:G2TRU7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.17","synonyms":[{"name":"Spom972h-wtf15","type":"exact"}],"termid":"PR:G2TRU7"}


id: PBO:0031549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rDNA_separation","termid":"PBO:0031549"}


id: PBO:0065927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 1","termid":"PBO:0065927"}


id: PBO:0075593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor, Kunitz type 5, pseudogene","termid":"PBO:0075593"}


id: PBO:0053000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 4","termid":"PBO:0053000"}


id: GO:0106029
data:
  {"annotated_genes":["SJAG_00088","SJAG_04065","SJAG_00319","SJAG_03572","SJAG_02978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95024,112880,114689],"is_not":false,"summary":null,"term":"GO:0106029"},{"annotations":[106608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[102856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA uridine = tRNA pseudouridine. Conversion of uridine in a tRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["PMID:11095668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0140098","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"tRNA pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:54572"],"synonyms":[{"name":"tRNA-pseudouridine synthase activity","type":"exact"},{"name":"tRNA-uridine isomerase activity","type":"exact"},{"name":"tRNA-uridine uracilmutase activity","type":"exact"},{"name":"transfer RNA pseudouridine synthetase activity","type":"exact"},{"name":"transfer ribonucleate pseudouridine synthetase activity","type":"exact"}],"termid":"GO:0106029","terms_by_termid":{"GO:0106029":null,"GO:0160148":null,"GO:0160150":null}}


id: GO:0062078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TSC1-TSC2 complex.","definition_xrefs":["PMID:28561066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TSC1-TSC2 complex binding","synonyms":[{"name":"tuberin sclerosis complex binding","type":"exact"},{"name":"tuberin-hamartin complex binding","type":"exact"}],"termid":"GO:0062078"}


id: GO:0008929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerone phosphate = methylglyoxal + phosphate.","definition_xrefs":["EC:4.2.3.3","RHEA:17937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal synthase activity","secondary_identifiers":["MetaCyc:METHGLYSYN-RXN","KEGG_REACTION:R01016"],"synonyms":[{"name":"glycerone-phosphate phospho-lyase (methylglyoxal-forming)","type":"related"},{"name":"glycerone-phosphate phospho-lyase activity","type":"related"},{"name":"methylglyoxal synthetase activity","type":"related"}],"termid":"GO:0008929"}


id: PBO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.14","termid":"PBO:0002276"}


id: GO:1900301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of laminarabiose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of laminarabiose transport (obsolete GO:1900301)","synonyms":[{"name":"down regulation of laminarabiose transport","type":"exact"},{"name":"down-regulation of laminarabiose transport","type":"exact"},{"name":"downregulation of laminarabiose transport","type":"exact"},{"name":"inhibition of laminarabiose transport","type":"narrow"}],"termid":"GO:1900301"}


id: PBO:0014250
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes","termid":"PBO:0014250"}


id: MONDO:0017406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism-severe microcephaly-sensorineural hearing loss-dysmorphism syndrome","secondary_identifiers":["UMLS:C4751123","GARD:21174","Orphanet:293967","MEDGEN:1663043"],"synonyms":[{"name":"hypogonadotropic hypogonadism-severe microcephaly-sensorineural deafness-dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0017406","xrefs":{"Monarch":{"xref_id":"0017406"}}}


id: PBO:0114347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter","termid":"PBO:0114347"}


id: PBO:0004251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase/mitochondrial ribosomal protein subunit L49, fusion protein (predicted)","termid":"PBO:0004251"}


id: PBO:0086474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086474"}


id: PBO:0086667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; ORF emerged de novo in thymine-rich ancestral non-genic region, accumulated substantial changes under positive selection, and progressively increased its transmembrane propensity to give rise to a protein that integrates into the endoplasmic reticulum (ER) membrane while retaining potential for adaptive change","termid":"PBO:0086667"}


id: PBO:0079400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 7","termid":"PBO:0079400"}


id: GO:0030654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"beta-lactam antibiotic biosynthetic process","synonyms":[{"name":"beta-lactam antibiotic anabolism","type":"exact"},{"name":"beta-lactam antibiotic biosynthesis","type":"exact"},{"name":"beta-lactam antibiotic formation","type":"exact"},{"name":"beta-lactam antibiotic synthesis","type":"exact"}],"termid":"GO:0030654"}


id: GO:0032913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta3 production","termid":"GO:0032910"},{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta production","termid":"GO:0071635"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta3 production","synonyms":[{"name":"down regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"down-regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"downregulation of transforming growth factor-beta3 production","type":"exact"},{"name":"inhibition of transforming growth factor-beta3 production","type":"narrow"},{"name":"negative regulation of TGF-B3 production","type":"exact"},{"name":"negative regulation of TGFB3 production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032913"}


id: PBO:0045443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-30 histone methyltransferase complex regulatory subunit","termid":"PBO:0045443"}


id: PBO:0088627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq4","termid":"PBO:0088627"}


id: GO:0022017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the pallium. Neuroblasts are precursor cells that give rise to neurons.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuroblast division","termid":"GO:0021873"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in pallium","termid":"GO:0022017"}


id: GO:1902990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any telomere maintenance via semi-conservative replication that is involved in mitotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0007049","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"mitotic telomere maintenance via semi-conservative replication","synonyms":[{"name":"equal telomere replication involved in mitotic cell cycle","type":"related"},{"name":"telomeric fork progression involved in mitotic cell cycle","type":"narrow"},{"name":"telomeric replication fork progression involved in mitotic cell cycle","type":"narrow"}],"termid":"GO:1902990"}


id: MONDO:0017885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromophobe renal cell carcinoma is a rare subtype of renal cell carcinoma, originating from the intercalating cells of the collecting ducts and macroscopically manifesting as a well-circumscribed, highly lobulated, solid tumor that is usually diagnosed at an early stage. It is frequently asymptomatic, or may present with nonspecific symptoms, such as weight loss, fever or fatigue. The classic presentation observed in renal tumors (hematuria, flank pain and palpable mass) is occasionally observed and usually indicates an advanced stage of the disease. It is most frequently sporadic however, several familial cases, associated with Birt-Hogg DubC) syndrome, have been described.","definition_xrefs":["Orphanet:319303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"chromophobe renal cell carcinoma","secondary_identifiers":["DOID:4471","ICDO:8317/3","EFO:0000335","ICDO:8270/3","ONCOTREE:CHRCC","NCIT:C4146","MEDGEN:266091","UMLS:C1266042","GARD:6064","SCTID:733471003"],"synonyms":[{"name":"CHRCC","type":"related"},{"name":"CRCC","type":"related"},{"name":"ChRCC","type":"related"},{"name":"chromophobe adenocarcinoma","type":"exact"},{"name":"chromophobe carcinoma","type":"exact"},{"name":"chromophobe carcinoma of kidney","type":"exact"},{"name":"chromophobe carcinoma of the kidney","type":"exact"},{"name":"chromophobe cell carcinoma of kidney","type":"exact"},{"name":"chromophobe cell carcinoma of the kidney","type":"exact"},{"name":"chromophobe renal cell adenocarcinoma","type":"exact"},{"name":"chromophobe renal cell cancer","type":"exact"},{"name":"chromophobe renal cell carcinoma","type":"exact"},{"name":"kidney chromophobe","type":"exact"},{"name":"renal cell carcinoma, chromophobe cell","type":"exact"},{"name":"renal cell carcinoma, chromophobe type","type":"exact"}],"termid":"MONDO:0017885","xrefs":{"Monarch":{"xref_id":"0017885"}}}


id: PBO:0039590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7 like 1 (pseudogene)","termid":"PBO:0039590"}


id: GO:0097555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the right anterior basal body, extends laterally through the cytoplasm, crosses the left anterior axoneme, and exits as a membrane-bound flagellum on the anterior right side of the cell.","definition_xrefs":["ISBN:9780124260207","PMID:16607022","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right anterior flagellum","synonyms":[{"name":"right anterior cilium","type":"exact"}],"termid":"GO:0097555"}


id: PBO:0071087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 89","termid":"PBO:0071087"}


id: GO:0062133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamine biosynthesis.","definition_xrefs":["GOC:ha","PMID:19755423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of L-glutamine biosynthetic process","termid":"GO:0062132"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"L-glutamine biosynthetic process","termid":"GO:1901704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of L-glutamine biosynthetic process","termid":"GO:0062133"}


id: PBO:0108992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase, N-terminal truncated compared to other tlh genes","termid":"PBO:0108992"}


id: MONDO:0008629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, uric acid, autosomal dominant","secondary_identifiers":["MEDGEN:393068","OMIM:191700","DOID:0080654","UMLS:C2674049"],"synonyms":[{"name":"nephrolithiasis, uric acid, autosomal dominant","type":"related"},{"name":"urolithiasis, uric acid, autosomal dominant","type":"exact"}],"termid":"MONDO:0008629","xrefs":{"Monarch":{"xref_id":"0008629"}}}


id: PBO:0091080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane organization protein, HVA22/TB2/DP1 family protein","termid":"PBO:0091080"}


id: PBO:0043990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 3 receptor","termid":"PBO:0043990"}


id: PATO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a multi-cellular organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disposition","termid":"PATO:0001727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-cellular organismal disposition","termid":"PATO:0001728"}


id: GO:0035148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube formation","synonyms":[{"name":"lumen formation in an anatomical structure","type":"related"},{"name":"tube lumen formation","type":"exact"}],"termid":"GO:0035148"}


id: FYPO:0008023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"abolished cell population growth on leucine nitrogen source","synonyms":[{"name":"abolished growth on leucine nitrogen source","type":"broad"},{"name":"abolished leucine utilization","type":"related"},{"name":"abolished vegetative cell population growth on leucine nitrogen source","type":"exact"},{"name":"cell population growth on leucine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0008023"}


id: GO:0008094
data:
  {"annotated_genes":["SJAG_04064","SJAG_02545","SJAG_00884","SJAG_04183","SJAG_06642","SJAG_02822","SJAG_02610","SJAG_00729","SJAG_01221","SJAG_01644","SJAG_02563","SJAG_02571","SJAG_00111","SJAG_02460","SJAG_03982","SJAG_01762","SJAG_01653","SJAG_03898","SJAG_02906","SJAG_04692","SJAG_00995","SJAG_00475","SJAG_03780","SJAG_04150","SJAG_02199","SJAG_03495","SJAG_00871","SJAG_01938","SJAG_02200","SJAG_03206","SJAG_05173","SJAG_00857","SJAG_00980","SJAG_06597","SJAG_01807","SJAG_01419","SJAG_02708","SJAG_04038","SJAG_02872","SJAG_02373","SJAG_00500","SJAG_04372","SJAG_01354","SJAG_02348","SJAG_02575","SJAG_01620","SJAG_05295","SJAG_02698","SJAG_03613","SJAG_04114","SJAG_05372","SJAG_02748","SJAG_00806","SJAG_01010","SJAG_02187","SJAG_03832","SJAG_04210","SJAG_02242","SJAG_02182","SJAG_04147","SJAG_04755","SJAG_05105","SJAG_01410","SJAG_02521","SJAG_02294","SJAG_05313","SJAG_05353","SJAG_02267","SJAG_01677","SJAG_03886","SJAG_02226","SJAG_00272","SJAG_02690","SJAG_00925","SJAG_00757","SJAG_01878","SJAG_04355","SJAG_03036","SJAG_02295","SJAG_00863","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71009,73151,78135,89255,117984],"is_not":false,"summary":null,"term":"GO:0008094"},{"annotations":[75123,74987,71170,78036,111337,113338,73829,70714,79805,78479,113339,114676,78331,113340,113337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043138"},{"annotations":[107617,106805,115674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033679"},{"annotations":[77210,58953,92537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043139"},{"annotations":[100250,112915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033678"},{"annotations":[117092,79767,102056,117093,72176,80763,59865,112636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140658"},{"annotations":[67893,56961,60409,63486,61584,65004,59158,58085,59916,64396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[88336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[94974,96811,103930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[113472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[107327,112918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061995"},{"annotations":[113134,92073,76785,72974,71512,96675,113223,69233,77519,78044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003689"},{"annotations":[113224,89938,94332,95639,112671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061860"},{"annotations":[73173,72411,76664,77058,89534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003678"},{"annotations":[68741,59280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003918"},{"annotations":[78206,71484,113779,103547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015616"},{"annotations":[79210,90161,118585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036121"},{"annotations":[79213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061749"},{"annotations":[71173,78482,78335,79809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009378"},{"annotations":[72521,70773,73791,113690,80225,73334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"},{"annotations":[115678,70343,107620,109468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"},{"annotations":[73646,64098,73832,74990,78940,112924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017116"}]},"cv_name":"molecular_function","definition":"Catalytic activity that acts to modify DNA, driven by ATP hydrolysis.","definition_xrefs":["GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"},{"relation_name":"is_a","term_name":"ATP-dependent 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activity, acting on DNA","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004011"],"synonyms":[{"name":"ATPase activity, acting on DNA","type":"exact"},{"name":"ATPase, acting on DNA","type":"exact"},{"name":"DNA dependent ATPase activity","type":"exact"},{"name":"DNA-dependent ATPase activity","type":"exact"},{"name":"DNA-dependent adenosinetriphosphatase activity","type":"exact"},{"name":"adenosinetriphosphatase (DNA-dependent)","type":"exact"}],"termid":"GO:0008094","terms_by_termid":{"GO:0003678":null,"GO:0003689":null,"GO:0003918":null,"GO:0008094":null,"GO:0009378":null,"GO:0015616":null,"GO:0017116":null,"GO:0033678":null,"GO:0033679":null,"GO:0036121":null,"GO:0043138":null,"GO:0043139":null,"GO:0061749":null,"GO:0061860":null,"GO:0061995":null,"GO:0140658":null,"GO:0140664":null,"GO:0140665":null,"GO:0140674":null,"GO:0140750":null,"GO:0140849":null,"GO:1990518":null}}


id: PBO:0072813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9","termid":"PBO:0072813"}


id: FYPO:0001455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to water deprivation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular response to water deprivation","synonyms":[{"name":"normal cellular response to dehydration","type":"exact"},{"name":"normal cellular response to water deprivation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to water deprivation during vegetative growth","type":"exact"}],"termid":"FYPO:0001455"}


id: PBO:0048949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 2","termid":"PBO:0048949"}


id: PBO:0042625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 1B","termid":"PBO:0042625"}


id: PBO:0058905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12123","termid":"PBO:0058905"}


id: MONDO:0014812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration (obsolete MONDO:0014812)","termid":"MONDO:0014812","xrefs":{"Monarch":{"xref_id":"0014812"}}}


id: PBO:0048749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 2","termid":"PBO:0048749"}


id: FYPO:0004365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a dioxygenase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal dioxygenase activity","termid":"FYPO:0004364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished dioxygenase activity","synonyms":[{"name":"dioxygenase activity abolished","type":"exact"}],"termid":"FYPO:0004365"}


id: PBO:0084654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor orotate phosphoribosyltransferase (OPRTase) isozyme; catalyzes the fifth enzymatic step in the de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate; URA10 has a paralog, URA5, that arose from the whole genome duplication","termid":"PBO:0084654"}


id: MONDO:1011641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and woolly haircoat syndrome, non-human animal","secondary_identifiers":["OMIA:000161"],"termid":"MONDO:1011641","xrefs":{"Monarch":{"xref_id":"1011641"}}}


id: PBO:0039510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30A","termid":"PBO:0039510"}


id: PBO:0080852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YdjC chitooligosaccharide deacetylase homolog","termid":"PBO:0080852"}


id: FYPO:0006045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid biorientation begins later than normal.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid biorientation","termid":"FYPO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000138","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid biorientation","synonyms":[{"name":"delayed mitotic sister chromatid biorientation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid biorientation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"mitotic sister chromatid biorientation delayed","type":"exact"}],"termid":"FYPO:0006045"}


id: GO:0097310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first and second nucleotides of a 5'-capped mRNA.","definition_xrefs":["GOC:sp","PMID:20713356"],"gene_count":0,"genotype_count":0,"name":"obsolete cap2 mRNA methylation (obsolete GO:0097310)","synonyms":[{"name":"cap2 mRNA capping","type":"broad"}],"termid":"GO:0097310"}


id: PBO:0082465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium-binding component of the spindle pole body (SPB) half-bridge; required for SPB duplication in mitosis and meiosis II; homolog of mammalian centrin; binds multiubiquitinated proteins and is involved in proteasomal protein degradation","termid":"PBO:0082465"}


id: GO:0110077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular transport process in which transported substances are moved in extracellular vesicles between cells; transported substances are enclosed in the vesicle lumen or located in the extracellular vesicle membrane.","definition_xrefs":["PMID:29328916","PMID:29328915","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"vesicle-mediated intercellular transport","synonyms":[{"name":"endosomal trafficking","type":"related"}],"termid":"GO:0110077"}


id: FYPO:0005834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport to the cortex of the cell tip, driven by polymerization of a microtubule to which the protein is attached, is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["GO:0099110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip cortex during vegetative growth","termid":"FYPO:0005832"},{"relation_name":"is_a","term_name":"decreased protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein transport along microtubule to cell tip cortex during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0005834"}


id: MONDO:1011977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, non-human animal","secondary_identifiers":["OMIA:000830"],"termid":"MONDO:1011977","xrefs":{"Monarch":{"xref_id":"1011977"}}}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: PBO:0068335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 43","termid":"PBO:0068335"}


id: GO:0097234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an epidermal lamellar body, a specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body membrane","termid":"GO:0097232"},{"relation_name":"part_of","term_name":"epidermal lamellar body","termid":"GO:0097209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"epidermal lamellar body membrane","termid":"GO:0097234"}


id: GO:1900808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumigaclavine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumigaclavine C catabolic process (obsolete GO:1900808)","synonyms":[{"name":"fumigaclavine C breakdown","type":"exact"},{"name":"fumigaclavine C catabolism","type":"exact"},{"name":"fumigaclavine C degradation","type":"exact"}],"termid":"GO:1900808"}


id: MONDO:0000605
data:
  {"annotated_genes":["SJAG_01787","SJAG_00610","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[86181,86182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"}]},"cv_name":"mondo","definition":"An immune system disease that has basis in dysregulation of the hypersensitivity reaction, an inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system.","definition_xrefs":["ISBN-13:978-0-7817-3514-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypersensitivity reaction disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060056","EFO:1002003","NCIT:C3114","SCTID:473010000","MEDGEN:759636","UMLS:C3532523"],"synonyms":[{"name":"allergic reaction","type":"broad"},{"name":"hypersensitive","type":"exact"},{"name":"hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction","type":"exact"},{"name":"sensitive","type":"broad"},{"name":"sensitivity","type":"broad"}],"termid":"MONDO:0000605","terms_by_termid":{"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0000605"}}}


id: MONDO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare tumor containing unequivocal elements of both hepatocellular and cholangiocarcinoma that are intimately admixed. This tumor should be distinguished from separate hepatocellular carcinoma and cholangiocarcinoma arising in the same liver. The prognosis of this tumor is poor.","definition_xrefs":["NCIT:C3828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"combined hepatocellular carcinoma and cholangiocarcinoma","secondary_identifiers":["UMLS:C0221287","icd11.foundation:1097637010","MEDGEN:113160","Orphanet:529852","SCTID:274902006","GARD:22200","icd11.foundation:1600108866"],"synonyms":[{"name":"Cholangiohepatoma","type":"exact"},{"name":"Hepatocholangiocarcinoma","type":"exact"},{"name":"Mixed hepatocellular cholangiocarcinoma","type":"exact"},{"name":"carcinoma of liver and intrahepatic biliary tract","type":"broad"},{"name":"carcinoma of the liver and intrahepatic biliary tract","type":"exact"},{"name":"combined hepatocellular cancer and cholangiocarcinoma (bile duct cancer)","type":"exact"},{"name":"combined hepatocellular cancer and intrahepatic bile duct cancer (cholangiocarcinoma)","type":"exact"},{"name":"combined hepatocellular carcinoma and cholangiocarcinoma","type":"exact"},{"name":"liver and intrahepatic biliary tract carcinoma","type":"broad"}],"termid":"MONDO:0044791","xrefs":{"Monarch":{"xref_id":"0044791"}}}


id: PBO:0066579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 3","termid":"PBO:0066579"}


id: GO:0006885
data:
  {"annotated_genes":["SJAG_01397","SJAG_05294","SJAG_02470","SJAG_01817","SJAG_00516","SJAG_03962","SJAG_04955","SJAG_04616","SJAG_01913","SJAG_00212","SJAG_00301","SJAG_01669","SJAG_01129","SJAG_02716","SJAG_04258","SJAG_02023","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[78254,71820,73599,71196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[96192,78873,73356,73027,74380,100378,80425,88388,104273,102000,71397,96012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02716":null,"SJAG_03962":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pH","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen ion homeostasis","type":"exact"}],"termid":"GO:0006885","terms_by_termid":{"GO:0007035":null,"GO:0030641":null,"GO:0051453":null}}


id: PBO:0044854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 135","termid":"PBO:0044854"}


id: FYPO:0000679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a developmental process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process phenotype","termid":"FYPO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental process phenotype","synonyms":[{"name":"fission yeast developmental process phenotype","type":"exact"}],"termid":"FYPO:0000679"}


id: FYPO:0001424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nucleus during vegetative growth","synonyms":[{"name":"abolished protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"nuclear exclusion during vegetative growth","type":"related"},{"name":"nuclear protein exclusion during vegetative growth","type":"related"},{"name":"protein localization to nucleus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001424"}


id: PBO:0089019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup132","termid":"PBO:0089019"}


id: PBO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor Coa2 (predicted)","termid":"PBO:0036324"}


id: PBO:0055752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA induced by HCV, regulator of SREBF1","termid":"PBO:0055752"}


id: PBO:0083184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the Ty1 long terminal repeat, YPRWdelta12","termid":"PBO:0083184"}


id: GO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via the activity of voltage-gated calcium channels.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051929)","synonyms":[{"name":"activation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via voltage gated calcium channel","type":"exact"},{"name":"stimulation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via voltage gated calcium channel","type":"exact"}],"termid":"GO:0051929"}


id: PR:P87313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malignant T cell-amplified sequence 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03852","PANTHER:PTHR22798:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.12","secondary_identifiers":["UniProtKB:P87313"],"synonyms":[{"name":"Spom972h-MCTS1","type":"exact"}],"termid":"PR:P87313"}


id: MONDO:0956964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma SHH activated that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and the presence of TP53 mutations.","definition_xrefs":["DOID:0080704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma SHH activated","termid":"MONDO:0850197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated and TP53 mutant","secondary_identifiers":["NCIT:C129442"],"termid":"MONDO:0956964","xrefs":{"Monarch":{"xref_id":"0956964"}}}


id: PATO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000593 absolute volume value (obsolete PATO:0000593)","termid":"PATO:0000593"}


id: PBO:0041335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 14","termid":"PBO:0041335"}


id: PBO:0077873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase","termid":"PBO:0077873"}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: MONDO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid lesion composed of fibrous tissue and epithelium. Representative examples include skin tag, anal fibroepithelial polyp, and gingival fibroepithelial polyp.","definition_xrefs":["NCIT:C3337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroepithelial polyp","secondary_identifiers":["MEDGEN:1849971","UMLS:C5848070"],"synonyms":[{"name":"fibroepithelial polyp","type":"exact"},{"name":"fibropapilloma, benign","type":"exact"}],"termid":"MONDO:0060765","xrefs":{"Monarch":{"xref_id":"0060765"}}}


id: MONDO:0018431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary sensory and autonomic neuropathy (obsolete MONDO:0015366)","termid":"MONDO:0015366"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"cold-induced sweating syndrome - hyperthermia spectrum","secondary_identifiers":["MEDGEN:1842440","Orphanet:401993","UMLS:C5681139","GARD:21708"],"termid":"MONDO:0018431","xrefs":{"Monarch":{"xref_id":"0018431"}}}


id: GO:0016430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N6-methyladenine.","definition_xrefs":["EC:2.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0140098","GO:0140101","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tRNA (adenine-N6)-methyltransferase activity","secondary_identifiers":["MetaCyc:TRNA-ADENINE-N6--METHYLTRANSFERASE-RXN","RHEA:16785"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (adenine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-N6-)-methyltransferase activity","type":"related"},{"name":"tRNA (adenine-N6-)-methyltransferase activity","type":"exact"}],"termid":"GO:0016430"}


id: PBO:0061425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone reductase 2","termid":"PBO:0061425"}


id: PBO:0050342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 44","termid":"PBO:0050342"}


id: GO:0045618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epidermal cell differentiation","termid":"GO:0045606"},{"relation_name":"is_a","term_name":"regulation of keratinocyte differentiation","termid":"GO:0045616"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte differentiation","synonyms":[{"name":"activation of keratinocyte differentiation","type":"narrow"},{"name":"stimulation of keratinocyte differentiation","type":"narrow"},{"name":"up regulation of keratinocyte differentiation","type":"exact"},{"name":"up-regulation of keratinocyte differentiation","type":"exact"},{"name":"upregulation of keratinocyte differentiation","type":"exact"}],"termid":"GO:0045618"}


