# terms

id: PBO:0089351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet1","termid":"PBO:0089351"}


id: MONDO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder marked by obstruction of conducting airways of the lung. airway obstruction may be acute, chronic, intermittent, or persistent.","definition_xrefs":["MESH:D008173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstructive lung disease","secondary_identifiers":["DOID:2320","UMLS:C0001883","MEDGEN:1387"],"synonyms":[{"name":"respiratory airway obstruction","type":"exact"}],"termid":"MONDO:0002267","xrefs":{"Monarch":{"xref_id":"0002267"}}}


id: GO:0034988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on the Fc-gamma receptor I complex. The complex functions primarily as an activating receptor for IgG.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor binding","termid":"GO:0034987"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Fc-gamma receptor I complex binding","termid":"GO:0034988"}


id: PBO:0004747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf59","termid":"PBO:0004747"}


id: MONDO:0009569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hennekam-Beemer syndrome is characterized by the association of skin mastocytosis (appearing as diffuse pigmentation), short stature, microcephaly, conductive hearing loss, and dysmorphic features. It has been described in only two (female) cases: one with normal mental development born to consanguineous parents and the other with severe psychomotor retardation born to unrelated parents. The mode of inheritance is most likely autosomal recessive.","definition_xrefs":["Orphanet:2135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hennekam-Beemer syndrome","secondary_identifiers":["ICD10CM:Q82.2","GARD:3409","MEDGEN:462843","MESH:C536033","OMIM:248910","SCTID:722453009","UMLS:C3151493"],"synonyms":[{"name":"Hennekam Beemer syndrome","type":"related"},{"name":"cutaneous mastocytosis, conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis cutaneous with short stature conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis-short stature-hearing loss syndrome","type":"exact"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe intellectual disability","type":"related"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe mental retardation","type":"related"}],"termid":"MONDO:0009569","xrefs":{"Monarch":{"xref_id":"0009569"}}}


id: GO:2000004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric S-shaped body morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"metanephric S-shaped body morphogenesis","termid":"GO:0072284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric S-shaped body morphogenesis","termid":"GO:2000004"}


id: PBO:0052412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1","termid":"PBO:0052412"}


id: PBO:0031744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intracellular_transport","termid":"PBO:0031744"}


id: FYPO:0007476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of an otherwise normal occurrence of cell cycle arrest in mitotic G1 phase is shorter than normal.","definition_xrefs":["PMID:32361273","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"decreased duration of cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic cell cycle arrest in G1 phase","type":"exact"}],"termid":"FYPO:0007476"}


id: FYPO:0000182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell wall organization is abnormal. Cell wall organization results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GO:0031505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0004805","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell wall organization during vegetative growth","synonyms":[{"name":"abnormal cell wall organisation during vegetative growth","type":"exact"},{"name":"abnormal cell wall organization during mitotic cell cycle","type":"related"},{"name":"abnormal fungal-type cell wall organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000182"}


id: MONDO:0015217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A developmental defect of the eye that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","secondary_identifiers":["Orphanet:108985"],"synonyms":[{"name":"isolated developmental defect of the eye","type":"exact"},{"name":"nonsyndromic developmental defect of the eye","type":"exact"}],"termid":"MONDO:0015217","xrefs":{"Monarch":{"xref_id":"0015217"}}}


id: GO:2001194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902986"},{"relation_name":"regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001194"}


id: PBO:0040100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"artemin","termid":"PBO:0040100"}


id: PBO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown HAD superfamily hydrolase","termid":"PBO:0018252"}


id: SO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that results from recombination between attP_site and attB_site, composed of the 5' portion of attP_site and the 3' portion of attB_site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attR_site","synonyms":[{"name":"attPB'","type":"related"},{"name":"attR site","type":"exact"}],"termid":"SO:0000945"}


id: MONDO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete homozygous 2p21 microdeletion syndrome (obsolete MONDO:0018246)","secondary_identifiers":["Orphanet:369886"],"synonyms":[{"name":"2p21 contiguous gene deletion syndrome","type":"exact"}],"termid":"MONDO:0018246","xrefs":{"Monarch":{"xref_id":"0018246"}}}


id: GO:0005693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U12, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U12 snRNP, most of which remain associated with the U12 snRNA both while the U12 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","ISBN:0879695897","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U12 snRNP","synonyms":[{"name":"snRNP U12","type":"exact"}],"termid":"GO:0005693"}


id: GO:0036216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["PMID:7520444","GOC:uh","PMID:18787413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stem cell factor","termid":"GO:0036215"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to stem cell factor stimulus","synonyms":[{"name":"cellular response to KIT ligand","type":"exact"},{"name":"cellular response to KITLG","type":"exact"},{"name":"cellular response to SCF","type":"exact"},{"name":"cellular response to hematopoietic growth factor KL","type":"exact"}],"termid":"GO:0036216"}


id: GO:0102923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-N-debenzoyltaxol + benzoyl-CoA = CoA + H+ + taxol.","definition_xrefs":["RHEA:33687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8859"],"termid":"GO:0102923"}


id: GO:0099171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the presynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"}


id: GO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the contraction and relaxation movements of the pharyngeal muscle that mediates feeding in nematodes.","definition_xrefs":["PMID:2181052","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"}


id: PBO:0043351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1 like","termid":"PBO:0043351"}


id: MONDO:0034977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare disorder of the anterior segment of the eye characterized by the presence of an unusually small and spherical lens with increased anteroposterior thickness, and visibility of the lens equator on full mydriasis. The condition is typically bilateral and may be associated with lens dislocation or subluxation, lenticular myopia, and secondary angle-closure glaucoma.","definition_xrefs":["Orphanet:519396"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated microspherophakia (obsolete MONDO:0034977)","secondary_identifiers":["icd11.foundation:1194029577","ICD10CM:Q12.4"],"termid":"MONDO:0034977","xrefs":{"Monarch":{"xref_id":"0034977"}}}


id: GO:0009573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chloroplast, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast ribulose bisphosphate carboxylase complex","synonyms":[{"name":"chloroplast RubisCO complex","type":"exact"}],"termid":"GO:0009573"}


id: MONDO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kleine-Levin syndrome (obsolete MONDO:0000692)","termid":"MONDO:0000692","xrefs":{"Monarch":{"xref_id":"0000692"}}}


id: FYPO:0000020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"pear-shaped cell","synonyms":[{"name":"cell morphology, pear shaped","type":"exact"},{"name":"ice cream cone-shaped cell","type":"exact"}],"termid":"FYPO:0000020"}


id: GO:0097746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel diameter maintenance","secondary_identifiers":["GO:0050880","GO:0042312"],"synonyms":[{"name":"blood vessel diameter homeostasis","type":"exact"},{"name":"regulation of blood vessel diameter","type":"exact"},{"name":"regulation of blood vessel size","type":"related"},{"name":"regulation of vasodilatation","type":"related"},{"name":"regulation of vasodilation","type":"related"}],"termid":"GO:0097746"}


id: GO:0045344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"negatively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class I biosynthetic process","synonyms":[{"name":"down regulation of MHC class I biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"downregulation of MHC class I biosynthetic process","type":"exact"},{"name":"inhibition of MHC class I biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class I anabolism","type":"exact"},{"name":"negative regulation of MHC class I biosynthesis","type":"exact"},{"name":"negative regulation of MHC class I formation","type":"exact"},{"name":"negative regulation of MHC class I synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045344"}


id: FYPO:0000520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidative phosphorylation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular respiration","termid":"FYPO:0000565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased oxidative phosphorylation","synonyms":[{"name":"increased oxidative phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased oxidative phosphorylation during vegetative growth","type":"exact"},{"name":"oxidative phosphorylation: increased","type":"related"}],"termid":"FYPO:0000520"}


id: GO:0061361
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104065],"is_not":false,"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000115"},{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000247"},{"relation_name":"positively_regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061361","terms_by_termid":{"GO:0061361":null}}


id: GO:1900269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reverse transcription.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reverse transcription","termid":"GO:1900268"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"reverse transcription","termid":"GO:0001171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of reverse transcription","synonyms":[{"name":"down regulation of reverse transcription","type":"exact"},{"name":"down-regulation of reverse transcription","type":"exact"},{"name":"downregulation of reverse transcription","type":"exact"},{"name":"inhibition of reverse transcription","type":"narrow"}],"termid":"GO:1900269"}


id: MONDO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000528 (obsolete MONDO:0000528)","termid":"MONDO:0000528","xrefs":{"Monarch":{"xref_id":"0000528"}}}


id: FYPO:0007557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tolnaftate.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on tolnaftate","synonyms":[{"name":"normal cell population growth in presence of tolnaftate","type":"exact"},{"name":"normal cell population growth on TFT","type":"exact"},{"name":"normal cell population growth on tolnaftate","type":"exact"},{"name":"normal cellular response to tolnaftate","type":"related"},{"name":"normal vegetative cell population growth on tolnaftate","type":"exact"}],"termid":"FYPO:0007557"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: GO:0035290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8.","definition_xrefs":["PMID:1360402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk segmentation","termid":"GO:0035290"}


id: GO:0047683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NADP+ + AMP + diphosphate + H2O = an aromatic acid + NADPH + ATP.","definition_xrefs":["RHEA:19229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.30","MetaCyc:1.2.1.30-RXN"],"synonyms":[{"name":"aromatic acid reductase activity","type":"related"},{"name":"aryl-aldehyde:NADP+ oxidoreductase (ATP-forming)","type":"related"}],"termid":"GO:0047683"}


id: MONDO:0006014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the vulva and vagina with a fungus of the genus CANDIDA. It is a disease associated with HIV infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous candidiasis","termid":"MONDO:0000879"},{"relation_name":"is_a","term_name":"vulvovaginitis","termid":"MONDO:0007019"},{"relation_name":"is_a","term_name":"infective vaginitis","termid":"MONDO:0023557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvovaginal candidiasis","secondary_identifiers":["SCTID:72605008","MESH:D002181","ICD9:112.1","EFO:0007543","UMLS:C0700345","NCIT:C2914","MEDGEN:195979","ICD10CM:B37.3","DOID:2272"],"synonyms":[{"name":"candidal vulvovaginitis","type":"exact"},{"name":"candidal: [vulvovaginitis NOS] or [cervix]","type":"exact"},{"name":"candidal: cervix","type":"exact"},{"name":"candidiasis of vulva and vagina","type":"exact"},{"name":"monilial vulvovaginitis","type":"exact"},{"name":"vaginal candidiasis","type":"exact"},{"name":"vulvovaginal candidiasis","type":"exact"}],"termid":"MONDO:0006014","xrefs":{"Monarch":{"xref_id":"0006014"}}}


id: FYPO:0006525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which sister kinetochores of a replicated chromosome separate prematurely when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:11598020","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"premature sister kinetochore separation during stationary phase","synonyms":[{"name":"split kinetochores during stationary phase","type":"related"}],"termid":"FYPO:0006525"}


id: GO:0080141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of jasmonic acid.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"regulation of jasmonic acid metabolic process","termid":"GO:0080140"},{"relation_name":"regulates","term_name":"jasmonic acid biosynthetic process","termid":"GO:0009695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of jasmonic acid biosynthetic process","termid":"GO:0080141"}


id: PBO:0070358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 31","termid":"PBO:0070358"}


id: GO:1990462
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94982],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"Omega-shaped (as in the Greek capital letter) intracellular membrane-bounded organelle enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum. Omegasomes are the first step of the formation of autophagosomes via the phagophore assembly sites.","definition_xrefs":["GOC:mf","PMID:24591649","PMID:18725538","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"omegasome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990462","terms_by_termid":{"GO:0097629":null}}


id: MONDO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dental caries that involves the dentine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin caries","secondary_identifiers":["UMLS:C0266846","DOID:10461","MEDGEN:540210","ICD9:521.02","SCTID:442551007"],"synonyms":[{"name":"compound dental caries","type":"exact"},{"name":"dental caries extending into dentine","type":"exact"},{"name":"dental caries of dentine","type":"exact"},{"name":"dentine dental caries","type":"exact"}],"termid":"MONDO:0001041","xrefs":{"Monarch":{"xref_id":"0001041"}}}


id: PBO:0087492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA polymerase delta (polymerase III); essential for cell viability; involved in DNA replication and DNA repair; forms a complex with Rev3p, Rev7p and Pol32p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087492"}


id: PBO:0024837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf4 (predicted)","termid":"PBO:0024837"}


id: FYPO:0006496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of phosphatidylserine in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:27852900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal membrane lipid distribution","termid":"FYPO:0006546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal plasma membrane phosphatidylserine distribution","synonyms":[{"name":"normal plasma membrane PS distribution","type":"exact"},{"name":"normal plasma membrane phosphatidylserine distribution during mitotic cell cycle","type":"related"},{"name":"normal plasma membrane phosphatidylserine distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006496"}


id: PBO:0067600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 763, pseudogene","termid":"PBO:0067600"}


id: FYPO:0004651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"decreased secondary cell septum thickness","synonyms":[{"name":"decreased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased secondary septum thickness","type":"exact"},{"name":"reduced secondary cell septum thickness","type":"exact"},{"name":"thin secondary septum","type":"exact"}],"termid":"FYPO:0004651"}


id: PBO:0074747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105C","termid":"PBO:0074747"}


id: PBO:0052404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5A","termid":"PBO:0052404"}


id: MONDO:0859369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joint contractures, osteochondromas, and B-cell lymphoma","secondary_identifiers":["MEDGEN:1824078","OMIM:620232","UMLS:C5774305"],"termid":"MONDO:0859369","xrefs":{"Monarch":{"xref_id":"0859369"}}}


id: GO:2000769
data:
  {"annotated_genes":["SJAG_02536","SJAG_01799","SJAG_03581","SJAG_03637","SJAG_00845","SJAG_00236","SJAG_02222","SJAG_04666","SJAG_04522","SJAG_04509","SJAG_00596","SJAG_02022","SJAG_00610","SJAG_00661","SJAG_00333","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88249,92786,103211,106485],"is_not":false,"summary":null,"term":"GO:2000769"},{"annotations":[116978,107987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[105729,94102,100541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[104065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"},{"annotations":[119182,113435,96021,94945,104900,91498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02222":null,"SJAG_02536":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000769","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: FYPO:0005161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression resumes after a longer time than normal after exposure to hydroxyurea.","definition_xrefs":["PMID:16849602","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"delayed cell cycle progression following HU exposure","type":"exact"},{"name":"delayed cell cycle progression following cellular response to HU","type":"exact"},{"name":"delayed cell cycle progression following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005161"}


id: MONDO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tertiary syphilis that is characterized by granulomatous lesions, called gummas, which are characterized by a center of necrotic tissue with a rubbery texture. They form in the liver, bones, and testes but may affect any organ.","definition_xrefs":["DOID:0050584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tertiary syphilis","termid":"MONDO:0004497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gummatous syphilis","secondary_identifiers":["icd11.foundation:1630654348"],"termid":"MONDO:0000363","xrefs":{"Monarch":{"xref_id":"0000363"}}}


id: GO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription coregulator, a protein involved in regulation of transcription via protein-protein interactions with transcription factors and other transcription regulatory proteins. Cofactors do not bind DNA directly, but rather mediate protein-protein interactions between regulatory transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor binding","termid":"GO:0008134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transcription coregulator binding","secondary_identifiers":["GO:0001224"],"synonyms":[{"name":"RNA polymerase II transcription cofactor binding","type":"related"},{"name":"RNA polymerase II transcription coregulator binding","type":"related"},{"name":"transcription cofactor binding","type":"related"}],"termid":"GO:0001221"}


id: PBO:0035875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035875"}


id: MONDO:0014666
data:
  {"annotated_genes":["SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85498],"is_not":false,"summary":null,"term":"MONDO:0014666"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the POLR1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"POLR1C-related disorder","termid":"MONDO:0700278"},{"relation_name":"is_a","term_name":"POLR3-related leukodystrophy","termid":"MONDO:0700282"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060792","OMIM:616494","GARD:18088","MEDGEN:897960","UMLS:C4225305"],"synonyms":[{"name":"HLD11","type":"exact"},{"name":"POLR1C leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 11","type":"exact"},{"name":"leukodystrophy caused by mutation in POLR1C","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 11","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 11","type":"exact"}],"termid":"MONDO:0014666","terms_by_termid":{"MONDO:0014666":null},"xrefs":{"Monarch":{"xref_id":"0014666"}}}


id: PBO:0113031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER lumen; involved in recognition of N-acetylglucosamine; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0113031"}


id: PBO:0083171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps HYP2/YEL034W, a verified gene that encodes eiF-5A","termid":"PBO:0083171"}


id: PBO:0051642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1 pseudogene 1","termid":"PBO:0051642"}


id: GO:0052710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine breakdown","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine degradation","type":"exact"},{"name":"hercynine breakdown","type":"exact"},{"name":"hercynine catabolic process","type":"exact"},{"name":"hercynine catabolism","type":"exact"},{"name":"hercynine degradation","type":"exact"},{"name":"histidine betaine breakdown","type":"exact"},{"name":"histidine betaine catabolic process","type":"exact"},{"name":"histidine betaine catabolism","type":"exact"},{"name":"histidine betaine degradation","type":"exact"}],"termid":"GO:0052710"}


id: GO:0015780
data:
  {"annotated_genes":["SJAG_00339","SJAG_00434","SJAG_04697","SJAG_04406","SJAG_01177","SJAG_04162","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[72185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[75369,88720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[76365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[75496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[112765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[77970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[66614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide-sugars into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide-sugar transport","type":"related"}],"termid":"GO:0015780","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:1990569":null,"GO:1990570":null}}


id: GO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires specialized features of a sieve element.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element differentiation","termid":"GO:0090603"}


id: GO:0034634
data:
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id: FYPO:0006608
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id: PBO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6, chromatin remodeling factor","termid":"PBO:0046481"}


id: FYPO:0000010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells fail to adhere to a substrate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell-substrate adhesion","synonyms":[{"name":"abolished cell-substrate adhesion during mitotic cell cycle","type":"related"},{"name":"cell-substrate adhesion abolished","type":"exact"},{"name":"cell-substrate adhesion abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000010"}


id: MONDO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gangliosidosis (obsolete MONDO:0002284)","termid":"MONDO:0002284","xrefs":{"Monarch":{"xref_id":"0002284"}}}


id: PBO:0065107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCA antisense RNA 1","termid":"PBO:0065107"}


id: GO:0010689
data:
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id: PBO:0030050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric-chelate_reductase_activity","termid":"PBO:0030050"}


id: GO:0080097
data:
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id: PBO:0111496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex associated RNA-binding protein Rns1","termid":"PBO:0111496"}


id: GO:0031946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"}


id: PBO:0030741
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id: GO:0009892
data:
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id: FYPO:0004869
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id: PBO:0052822
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id: GO:0051906
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id: PBO:0059794
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id: GO:0106411
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id: GO:0047066
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id: GO:0098860
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id: MONDO:1011665
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id: PBO:0002315
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id: PBO:0003733
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id: PBO:0042633
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id: GO:0060825
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id: PBO:0061394
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id: PBO:0062278
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id: GO:0047983
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id: PBO:0055788
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id: PBO:0028693
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id: PBO:0043584
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id: PBO:0028141
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id: MONDO:0023628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Levator syndrome is characterized by sporadic pain in the rectum caused by spasm of a muscle near the anus (the levator ani muscle). The muscle spasm causes pain that typically is not related to defecation. The pain usually lasts less than 20 minutes. Pain may be brief and intense or a vague ache high in the rectum. It may occur spontaneously or with sitting and can waken a person from sleep. The pain may feel as if it would be relieved by the passage of gas or a bowel movement. In severe cases, the pain can persist for many hours and can recur frequently. A person may have undergone various unsuccessful rectal operations to relieve these symptoms.","definition_xrefs":["GARD:0006899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"levator syndrome","secondary_identifiers":["MESH:C535890","MEDGEN:98071","SCTID:62647006","UMLS:C0423738","NCIT:C113615"],"synonyms":[{"name":"anorectal spasm","type":"related"},{"name":"levator ani spasm syndrome","type":"related"},{"name":"levator ani syndrome","type":"related"},{"name":"levator syndrome","type":"exact"},{"name":"painful spasm of anus","type":"exact"},{"name":"paroxysmal proctalgia","type":"related"},{"name":"proctalgia fugax","type":"related"},{"name":"psychogenic anal spasm","type":"related"}],"termid":"MONDO:0023628","xrefs":{"Monarch":{"xref_id":"0023628"}}}


id: MONDO:0030982
data:
  {"annotated_genes":["SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85923],"is_not":false,"summary":null,"term":"MONDO:0030982"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"sulfide quinone oxidoreductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1780603","UMLS:C5543168","OMIM:619221"],"synonyms":[{"name":"SQORD","type":"exact"},{"name":"sulfide:quinone oxidoreductase deficiency","type":"exact"}],"termid":"MONDO:0030982","terms_by_termid":{"MONDO:0030982":null},"xrefs":{"Monarch":{"xref_id":"0030982"}}}


id: PBO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 2","termid":"PBO:0047069"}


id: PBO:0064078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 112","termid":"PBO:0064078"}


id: GO:0009962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flavonoid biosynthetic process","synonyms":[{"name":"regulation of flavonoid anabolism","type":"exact"},{"name":"regulation of flavonoid biosynthesis","type":"exact"},{"name":"regulation of flavonoid formation","type":"exact"},{"name":"regulation of flavonoid synthesis","type":"exact"}],"termid":"GO:0009962"}


id: GO:0010573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of vascular endothelial growth factor production due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"vascular endothelial growth factor production","synonyms":[{"name":"VEGF production","type":"exact"}],"termid":"GO:0010573"}


id: PBO:0076883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 35","termid":"PBO:0076883"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["PMID:23706739","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: GO:1900821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orlandin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"orlandin metabolic process","termid":"GO:1900819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orlandin biosynthetic process","synonyms":[{"name":"orlandin anabolism","type":"exact"},{"name":"orlandin biosynthesis","type":"exact"},{"name":"orlandin formation","type":"exact"},{"name":"orlandin synthesis","type":"exact"}],"termid":"GO:1900821"}


id: PBO:0081217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMIZ1 antisense RNA 1","termid":"PBO:0081217"}


id: GO:0010092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of an animal organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ identity","termid":"GO:0010092"}


id: PBO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6","termid":"PBO:0090704"}


id: MONDO:0019231
data:
  {"annotated_genes":["SJAG_02297","SJAG_00070","SJAG_03934","SJAG_04263"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012073"},{"annotations":[86977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011624"},{"annotations":[86474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014881"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorders of pentose/polyol metabolism","termid":"MONDO:0018605"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_02297":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"inborn disorder of pentose phosphate metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79186","icd11.foundation:2067324607","GARD:18962","UMLS:C5681279","MEDGEN:1842861"],"synonyms":[{"name":"disorder of pentose phosphate metabolism","type":"related"}],"termid":"MONDO:0019231","terms_by_termid":{"MONDO:0010480":null,"MONDO:0011624":null,"MONDO:0012073":null,"MONDO:0014881":null},"xrefs":{"Monarch":{"xref_id":"0019231"}}}


id: GO:0042627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues.","definition_xrefs":["GOC:jl","GOC:rl","PMID:10580165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"chylomicron","secondary_identifiers":["Wikipedia:Chylomicron"],"termid":"GO:0042627"}


id: PBO:0108581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, human ATXN10 ortholog","termid":"PBO:0108581"}


id: PBO:0087447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit IV of cytochrome c oxidase; the terminal member of the mitochondrial inner membrane electron transport chain; precursor N-terminal 25 residues are cleaved during mitochondrial import; phosphorylated; spermidine enhances translation","termid":"PBO:0087447"}


id: GO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor 4 where the TRAM adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:14556004","GOC:BHF","PMID:18297073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRAM-dependent toll-like receptor signaling pathway","termid":"GO:0035668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRAM-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035669"}


id: PBO:0083157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1","termid":"PBO:0083157"}


id: PBO:0034679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_triglyceride_level","termid":"PBO:0034679"}


id: PBO:0076888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 41","termid":"PBO:0076888"}


id: GO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete viral replication (obsolete GO:0008166)","synonyms":[{"name":"viral replication","type":"exact"}],"termid":"GO:0008166"}


id: MONDO:1011620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumour that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilms tumor, non-human animal","termid":"MONDO:1011439"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, dog","secondary_identifiers":["OMIA:001142-9615"],"termid":"MONDO:1011620","xrefs":{"Monarch":{"xref_id":"1011620"}}}


id: GO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:add","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure homeostasis","termid":"GO:0060249"},{"relation_name":"part_of","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue homeostasis","synonyms":[{"name":"tissue maintenance","type":"narrow"}],"termid":"GO:0001894"}


id: GO:0019960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X3-C chemokine; C-X3-C chemokines have three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"C-X3-C chemokine binding","termid":"GO:0019960"}


id: PBO:0111520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 3","termid":"PBO:0111520"}


id: SO:1000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a change in primary translation product of a transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000088 sequence_variant_affecting_translational_product (obsolete SO:1000088)","synonyms":[{"name":"mutation affecting translational product","type":"related"},{"name":"mutation causing partially characterised change of translational product","type":"related"},{"name":"mutation causing uncharacterised change of translational product","type":"related"},{"name":"sequence variant affecting translational product","type":"exact"},{"name":"sequence variant causing partially characterised change of translational product","type":"exact"},{"name":"sequence variant causing uncharacterised change of translational product","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_change_of_translational_product","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_change_of_translational_product","type":"exact"}],"termid":"SO:1000088"}


id: GO:0018104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of covalently linking peptidoglycan (murein) to proteins.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan biosynthetic process","termid":"GO:0009252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"peptidoglycan-protein cross-linking","termid":"GO:0018104"}


id: GO:0097488
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a multivesicular body internal vesicle.","definition_xrefs":["GOC:pde","PMID:21183070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"multivesicular body, internal vesicle","termid":"GO:0097487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"multivesicular body, internal vesicle membrane","termid":"GO:0097488"}


id: PR:O94716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.04","synonyms":[{"name":"Spom972h-fta4","type":"exact"},{"name":"sim4 complex subunit fta4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94716"}


id: GO:0006769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide, pyridine-3-carboxamide, the amide of nicotinic acid. It is a member of the B complex of vitamins and occurs widely in living organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinamide metabolic process","secondary_identifiers":["MetaCyc:PWY-5083"],"synonyms":[{"name":"niacin metabolic process","type":"related"},{"name":"niacin metabolism","type":"related"},{"name":"nicotinamide metabolism","type":"exact"},{"name":"vitamin B3 metabolic process","type":"broad"},{"name":"vitamin B3 metabolism","type":"broad"}],"termid":"GO:0006769"}


id: MONDO:0032794
data:
  {"annotated_genes":["SJAG_00742"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87321],"is_not":false,"summary":null,"term":"MONDO:0032794"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00742":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"leber congenital amaurosis 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081169","OMIM:618513","MEDGEN:1679297","UMLS:C5193139","GARD:16359"],"synonyms":[{"name":"LCA19","type":"related"},{"name":"LEBER CONGENITAL AMAUROSIS 19","type":"related"}],"termid":"MONDO:0032794","terms_by_termid":{"MONDO:0032794":null},"xrefs":{"Monarch":{"xref_id":"0032794"}}}


id: MONDO:0017462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by non-union of the tibia, which is present at birth. It is usually associated with neurofibromatosis type 1.","definition_xrefs":["NCIT:C132080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the tibia","secondary_identifiers":["MEDGEN:539398","Orphanet:295018","GARD:21203","SCTID:55379003","UMLS:C0265661"],"synonyms":[{"name":"congenital pseudarthrosis of the tibia","type":"exact"},{"name":"congenital pseudarthrosis of tibia","type":"exact"}],"termid":"MONDO:0017462","xrefs":{"Monarch":{"xref_id":"0017462"}}}


id: MONDO:0006686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infarctions that occur in the brain stem which is comprised of the midbrain; pons; and medulla oblongata. There are several named syndromes characterized by their distinctive clinical manifestations and specific sites of ischemic injury.","definition_xrefs":["MESH:D020526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain infarction","termid":"MONDO:0005394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain stem infarction","secondary_identifiers":["ICD9:434.91","SCTID:95457000","UMLS:C0521542","DOID:3523","MEDGEN:101068","EFO:1000847"],"synonyms":[{"name":"brain infarction of brainstem","type":"exact"},{"name":"brainstem brain infarction","type":"exact"},{"name":"brainstem infarction","type":"exact"}],"termid":"MONDO:0006686","xrefs":{"Monarch":{"xref_id":"0006686"}}}


id: PBO:0114523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, Clr6 and Rpd3L complex WD repeat subunit Prw1","termid":"PBO:0114523"}


id: GO:0071863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the frequency, rate or extent of cell proliferation in the bone marrow.","definition_xrefs":["PMID:17063141","GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation in bone marrow","termid":"GO:0071838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in bone marrow","synonyms":[{"name":"regulation of bone marrow cell proliferation","type":"exact"}],"termid":"GO:0071863"}


id: MONDO:0008531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T-complex locus TCP10B (obsolete MONDO:0008531)","secondary_identifiers":["OMIM:187030"],"synonyms":[{"name":"T-complex locus TCP10B","type":"exact"},{"name":"TCP10B","type":"related"}],"termid":"MONDO:0008531","xrefs":{"Monarch":{"xref_id":"0008531"}}}


id: MONDO:0013980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma type 1","termid":"MONDO:0019332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma, punctate type ib","secondary_identifiers":["GARD:15884","MEDGEN:767059","OMIM:614936","UMLS:C3554145"],"synonyms":[{"name":"PPKP1B","type":"exact"},{"name":"keratoderma, palmoplantar, punctate type IB","type":"exact"},{"name":"palmoplantar keratoderma, punctate type IB","type":"related"}],"termid":"MONDO:0013980","xrefs":{"Monarch":{"xref_id":"0013980"}}}


id: GO:0090148
data:
  {"annotated_genes":["SJAG_02384","SJAG_05261","SJAG_02848","SJAG_03464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102867,95335,103129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090149"},{"annotations":[100326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099050"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the separation of a single continuous membrane into two membranes.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null,"SJAG_03464":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane scission","type":"exact"}],"termid":"GO:0090148","terms_by_termid":{"GO:0090149":null,"GO:0099050":null}}


id: PBO:0088509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide synthase Aur1","termid":"PBO:0088509"}


id: GO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of more than 1000 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["GOC:mah","PMID:16954385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"long tract gene conversion","termid":"GO:0035824"}


id: PBO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CLN3","termid":"PBO:0016567"}


id: GO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sclerotome development","termid":"GO:0061056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerotome development","termid":"GO:0061190"}


id: PR:Q09773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug62 gene.","definition_xrefs":["UniProtKB:Q09773","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 62 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.04","synonyms":[{"name":"Spom972h-mug62","type":"exact"}],"termid":"PR:Q09773"}


id: PBO:0054383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1779","termid":"PBO:0054383"}


id: GO:1904681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3-methylcholanthrene stimulus.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000071","PMID:9224771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3-methylcholanthrene","termid":"GO:1904681"}


id: GO:1901553
data:
  {"annotated_genes":["SJAG_00671","SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65052],"is_not":false,"summary":null,"term":"GO:1901553"},{"annotations":[102018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"}]},"cv_name":"biological_process","definition":"The directed movement of malonic acid across a membrane.","definition_xrefs":["GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malonic acid transport","termid":"GO:1900752"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"malonic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"malonic acid membrane transport","type":"exact"}],"termid":"GO:1901553","terms_by_termid":{"GO:0098715":null,"GO:1901553":null}}


id: PBO:0058534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6079","termid":"PBO:0058534"}


id: GO:1990189
data:
  {"annotated_genes":["SJAG_04631","SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74459,77721],"is_not":false,"summary":null,"term":"GO:1990189"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-seryl-[protein] = CoA + H+ + N-terminal Nalpha-acetyl-L-seryl-[protein].","definition_xrefs":["PMID:23912279","RHEA:50504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N-terminal amino-acid acetyltransferase activity","termid":"GO:0004596"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03537":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0034212","GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein N-terminal-serine acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peptide-serine-alpha-N-acetyltransferase activity","type":"exact"}],"termid":"GO:1990189","terms_by_termid":{"GO:1990189":null}}


id: PBO:0056231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI1 antisense RNA 1","termid":"PBO:0056231"}


id: GO:0006506
data:
  {"annotated_genes":["SJAG_04881","SJAG_01416","SJAG_05278","SJAG_04165","SJAG_02776","SJAG_02913","SJAG_01227","SJAG_04975","SJAG_01860","SJAG_03066","SJAG_03292","SJAG_06383","SJAG_06425","SJAG_03115","SJAG_00846","SJAG_04924","SJAG_05327","SJAG_04337","SJAG_00068","SJAG_00831","SJAG_04119","SJAG_03506","SJAG_02523","SJAG_03672","SJAG_03801","SJAG_03878","SJAG_01570","SJAG_02488","SJAG_00295","SJAG_02804"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57895,58253,58357,58367,60813,62740,63395,63789,70238,72213,73110,73517,73890,75339,75905,75934,76816,76832,77526,77847,77855,78024,78237,78263,78598,87787,89910,93356,104074,104136],"is_not":false,"summary":null,"term":"GO:0006506"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage.","definition_xrefs":["GOC:go_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor metabolic process","termid":"GO:0006505"},{"relation_name":"is_a","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"part_of","term_name":"GPI anchored protein biosynthesis","termid":"GO:0180046"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006629","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"GPI anchor biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015998","Reactome:R-HSA-162710"],"synonyms":[{"name":"GPI anchor anabolism","type":"exact"},{"name":"GPI anchor biosynthesis","type":"exact"},{"name":"GPI anchor formation","type":"exact"},{"name":"GPI anchor synthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"glycosylphosphatidylinositol biosynthesis","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthetic process","type":"exact"}],"termid":"GO:0006506","terms_by_termid":{"GO:0006506":null}}


id: MONDO:0018421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 69","secondary_identifiers":["GARD:21699","UMLS:C5190577","MEDGEN:1679277","Orphanet:401830"],"synonyms":[{"name":"SPG69","type":"exact"}],"termid":"MONDO:0018421","xrefs":{"Monarch":{"xref_id":"0018421"}}}


id: PBO:0027588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-linear_elements_absent_from_cell","termid":"PBO:0027588"}


id: PBO:0063418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3A","termid":"PBO:0063418"}


id: PBO:0075523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E3","termid":"PBO:0075523"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: PATO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being cylindrical, in which the height is less than the diameter.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoid","synonyms":[{"name":"disc-shaped","type":"exact"},{"name":"disk-shaped","type":"exact"}],"termid":"PATO:0001874"}


id: PR:Q9Y7R1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC2H8.04 gene.","definition_xrefs":["UniProtKB:Q9Y7R1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2H8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.04","synonyms":[{"name":"Spom972h-SPCC2H8.04","type":"exact"}],"termid":"PR:Q9Y7R1"}


id: PBO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 1","termid":"PBO:0045006"}


id: GO:0043692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoterpenes, terpenes with a C10 structure.","definition_xrefs":["Wikipedia:Monoterpene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monoterpene metabolic process","synonyms":[{"name":"monoterpene metabolism","type":"exact"}],"termid":"GO:0043692"}


id: MONDO:0017154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with portal hypertension (PAH-PH) is a form of pulmonary arterial hypertension (PAH), characterized by an elevated pulmonary arterial resistance leading to right heart failure observed as a complication of portal hypertension.","definition_xrefs":["Orphanet:275813"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with portal hypertension (obsolete MONDO:0017154)","secondary_identifiers":["SCTID:445237003"],"synonyms":[{"name":"PAH associated with portal hypertension","type":"exact"},{"name":"POPH","type":"exact"},{"name":"Portopulmonary hypertension","type":"exact"}],"termid":"MONDO:0017154","xrefs":{"Monarch":{"xref_id":"0017154"}}}


id: MONDO:0007513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia with adrenal cyst","secondary_identifiers":["OMIM:129550","Orphanet:3391","MEDGEN:342106","UMLS:C1851850","MESH:C538015"],"synonyms":[{"name":"Odonto-onycho-hypohidrotic dysplasia-midline scalp defects syndrome","type":"exact"},{"name":"ectodermal dysplasia with adrenal cyst","type":"exact"}],"termid":"MONDO:0007513","xrefs":{"Monarch":{"xref_id":"0007513"}}}


id: PBO:0014618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation Fap7 (predicted)","termid":"PBO:0014618"}


id: PBO:0048365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 76","termid":"PBO:0048365"}


id: SO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological DNA region implicated in epigenomic changes caused by mechanisms other than changes in the underlying DNA sequence. This includes, nucleosomal histone post-translational modifications, nucleosome depletion to render DNA accessible and post-replicational base modifications such as cytosine modification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified_region","synonyms":[{"name":"epigenetically modified region","type":"related"}],"termid":"SO:0001720"}


id: GO:0002909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"negative regulation of B cell deletion","termid":"GO:0002868"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"negatively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral B cell deletion","synonyms":[{"name":"down regulation of peripheral B cell deletion","type":"exact"},{"name":"down-regulation of peripheral B cell deletion","type":"exact"},{"name":"downregulation of peripheral B cell deletion","type":"exact"},{"name":"inhibition of peripheral B cell deletion","type":"narrow"}],"termid":"GO:0002909"}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: MONDO:0003742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the heart. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart sarcoma","termid":"MONDO:0003354"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"heart fibrosarcoma","secondary_identifiers":["NCIT:C5361","DOID:6033","UMLS:C1332844","MEDGEN:232022"],"synonyms":[{"name":"Cardiac fibrosarcoma","type":"exact"},{"name":"cardiac fibrosarcoma","type":"exact"},{"name":"fibrosarcoma of heart","type":"exact"},{"name":"fibrosarcoma of the heart","type":"exact"},{"name":"heart fibrosarcoma","type":"exact"},{"name":"heart fibrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003742","xrefs":{"Monarch":{"xref_id":"0003742"}}}


id: PBO:0112002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, unknown specificity, implicated in vesicle fusion, possibly multiple pathways","termid":"PBO:0112002"}


id: PATO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an physical object that is currently realizing one of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation quality","termid":"PATO:0002353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active","termid":"PATO:0002354"}


id: GO:0050231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + putrescine = N-carbamoylputrescine + H+ + phosphate.","definition_xrefs":["RHEA:21936","EC:2.1.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"putrescine carbamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01399","MetaCyc:PUTRESCINE-CARBAMOYLTRANSFERASE-RXN"],"synonyms":[{"name":"PTCase activity","type":"related"},{"name":"carbamoyl-phosphate:putrescine carbamoyltransferase activity","type":"related"},{"name":"putrescine synthase activity","type":"related"},{"name":"putrescine transcarbamylase activity","type":"related"}],"termid":"GO:0050231"}


id: GO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for carbon-nitrogen ligases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-nitrogen ligase activity (obsolete GO:0016883)","synonyms":[{"name":"other carbon-nitrogen ligase activity","type":"exact"}],"termid":"GO:0016883"}


id: MONDO:0017539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postaxial polydactyly of toes, unilateral (obsolete MONDO:0017539)","secondary_identifiers":["Orphanet:295179"],"termid":"MONDO:0017539","xrefs":{"Monarch":{"xref_id":"0017539"}}}


id: GO:1901492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"positively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphangiogenesis","synonyms":[{"name":"activation of lymph vessel formation","type":"narrow"},{"name":"activation of lymphangiogenesis","type":"narrow"},{"name":"positive regulation of lymph vessel formation","type":"exact"},{"name":"up regulation of lymph vessel formation","type":"exact"},{"name":"up regulation of lymphangiogenesis","type":"exact"},{"name":"up-regulation of lymph vessel formation","type":"exact"},{"name":"up-regulation of lymphangiogenesis","type":"exact"},{"name":"upregulation of lymph vessel formation","type":"exact"},{"name":"upregulation of lymphangiogenesis","type":"exact"}],"termid":"GO:1901492"}


id: MONDO:1010313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylocostal dysostosis, autosomal recessive that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation, non-human animal","termid":"MONDO:1012966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylocostal dysostosis, autosomal recessive, non-human animal","secondary_identifiers":["OMIA:001944"],"termid":"MONDO:1010313","xrefs":{"Monarch":{"xref_id":"1010313"}}}


id: MONDO:0024311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the limb bone.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer affecting bone of limb skeleton","secondary_identifiers":["MEDGEN:1843503","ICD10CM:C40","UMLS:C0494152"],"synonyms":[{"name":"cancer of limb bone","type":"exact"},{"name":"limb bone cancer","type":"exact"},{"name":"malignant limb bone neoplasm","type":"exact"},{"name":"malignant neoplasm of limb bone","type":"exact"}],"termid":"MONDO:0024311","xrefs":{"Monarch":{"xref_id":"0024311"}}}


id: PBO:0078208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-1 (non-functional)","termid":"PBO:0078208"}


id: PBO:0063738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 3","termid":"PBO:0063738"}


id: PBO:0052269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4C","termid":"PBO:0052269"}


id: PBO:0110471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA1 pseudogene 1","termid":"PBO:0110471"}


id: GO:0018505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydronaphthalene-1,2-diol + NAD+ = naphthalene-1,2-diol + NADH + H+.","definition_xrefs":["EC:1.3.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cis-1,2-dihydro-1,2-dihydroxynaphthalene dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.29-RXN","RHEA:11832"],"synonyms":[{"name":"(+)-cis-naphthalene dihydrodiol dehydrogenase activity","type":"related"},{"name":"1,2-dihydroxy-1,2-dihydroxynaphthalene dehydrogenase activity","type":"exact"},{"name":"cis-1,2-dihydronaphthalene-1,2-diol:NAD+ 1,2-oxidoreductase activity","type":"related"},{"name":"cis-dihydrodiol naphthalene dehydrogenase activity","type":"related"},{"name":"cis-naphthalene dihydrodiol dehydrogenase activity","type":"related"},{"name":"naphthalene dihydrodiol dehydrogenase activity","type":"related"}],"termid":"GO:0018505"}


id: PBO:0038487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 3","termid":"PBO:0038487"}


id: PBO:0058956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase interacting serine/threonine kinase 2 pseudogene 1","termid":"PBO:0058956"}


id: GO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in a behavioral response to a repeated stimulus. This is exemplified by the failure of a person to show a startle response to a loud noise that has been repeatedly presented.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habituation","secondary_identifiers":["Wikipedia:Habituation"],"termid":"GO:0046959"}


id: PBO:0039665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit delta 1","termid":"PBO:0039665"}


id: GO:1901752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene A4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene A4 catabolic process","synonyms":[{"name":"leukotriene A4 breakdown","type":"exact"},{"name":"leukotriene A4 catabolism","type":"exact"},{"name":"leukotriene A4 degradation","type":"exact"}],"termid":"GO:1901752"}


id: PBO:0004743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF1674 family","termid":"PBO:0004743"}


id: PBO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-2-oxoglutarate aldolase 1","termid":"PBO:0050452"}


id: PBO:0088101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Urea amidolyase; contains both urea carboxylase and allophanate hydrolase activities, degrades urea to CO2 and NH3; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation; protein abundance increases in response to DNA replication stress","termid":"PBO:0088101"}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: PBO:0080427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 11","termid":"PBO:0080427"}


id: PBO:0049716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 2","termid":"PBO:0049716"}


id: GO:0009471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class III cytochrome c (obsolete GO:0009471)","synonyms":[{"name":"class III cytochrome c","type":"exact"}],"termid":"GO:0009471"}


id: GO:0060136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"},{"relation_name":"part_of","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic process involved in female pregnancy","termid":"GO:0060136"}


id: PBO:0076181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 6B member 1","termid":"PBO:0076181"}


id: PBO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw1 (predicted)","termid":"PBO:0005274"}


id: PBO:0082543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein related to glucanases localized in birth scars; possibly involved in cell wall septation; member of the SUN family; SUN4 has a paralog, SIM1, that arose from the whole genome duplication","termid":"PBO:0082543"}


id: PBO:0067021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 34, pseudogene","termid":"PBO:0067021"}


id: PBO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin","termid":"PBO:0043059"}


id: GO:0007034
data:
  {"annotated_genes":["SJAG_01645","SJAG_03976","SJAG_04070","SJAG_01445","SJAG_05210","SJAG_04936","SJAG_00777","SJAG_01981","SJAG_01367","SJAG_01809","SJAG_04912","SJAG_03347","SJAG_03511","SJAG_00900","SJAG_03442","SJAG_01913","SJAG_03072","SJAG_02453","SJAG_01281","SJAG_03137","SJAG_00204","SJAG_04822","SJAG_00301","SJAG_04489","SJAG_01586","SJAG_05303","SJAG_03250","SJAG_04931","SJAG_04047","SJAG_03005","SJAG_00299","SJAG_01360","SJAG_02912","SJAG_02049","SJAG_03892","SJAG_00821","SJAG_02584","SJAG_04024","SJAG_02811","SJAG_00416","SJAG_16459","SJAG_03385","SJAG_00916","SJAG_04023","SJAG_03403","SJAG_02240","SJAG_02234","SJAG_01876","SJAG_04349","SJAG_01488","SJAG_02117","SJAG_04902","SJAG_05245","SJAG_03963","SJAG_05207","SJAG_01242","SJAG_00108","SJAG_00208","SJAG_04552","SJAG_01527","SJAG_01324","SJAG_03783","SJAG_02587","SJAG_04966","SJAG_03756","SJAG_01229","SJAG_01598","SJAG_03962","SJAG_04643","SJAG_01088","SJAG_01080","SJAG_03726","SJAG_03848","SJAG_00181","SJAG_07012","SJAG_02349","SJAG_02315","SJAG_00380","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71396,72356,77835,89462,96193,114905],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[106129,88474,88439,113697,91426,88361,114838,91860,91995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[101814,97498,76532,97233,78067,90934,80000,110649,78126,70379,77955,109178,96490,100277,111887,99873,117942,76573,94549,73731,78477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[118826,117291,100619,106086,111279,101482,108001,102343,109372,100677,77612,77151,74307,75945,90535,110189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[76350,79621,103511,107499,71162,75622,99224,110592,104486,99043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[91362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[96908,73168,71639,78476,77486,74308,75946,77614,77953,80718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[91998,91863,101252,72703,109755,71322,73707,98317,88307,88477,73728,96323,72562,78064,115099,78580,71390,78815,106937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":79,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03962":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006623":null,"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0044395":null,"GO:0045324":null,"GO:0120113":null}}


id: GO:0047344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + GTP = diphosphate + GDP-D-glucose.","definition_xrefs":["RHEA:10708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"glucose-1-phosphate guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.34","KEGG_REACTION:R00954","MetaCyc:2.7.7.34-RXN"],"synonyms":[{"name":"GDP glucose pyrophosphorylase activity","type":"related"},{"name":"GDP-glucose diphosphorylase activity","type":"related"},{"name":"GDP-glucose pyrophosphorylase activity","type":"related"},{"name":"GTP:alpha-D-glucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:glucose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"guanosine diphosphoglucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047344"}


id: MONDO:0003935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare breast adenocarcinoma characterized by the presence of neoplastic oncocytic cells. The oncocytic cells comprise more than 70 percent of the malignant cellular population.","definition_xrefs":["NCIT:C40366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oncocytic breast carcinoma","secondary_identifiers":["DOID:6585","MEDGEN:309476","UMLS:C1518574"],"synonyms":[{"name":"oncocytic breast carcinoma","type":"exact"}],"termid":"MONDO:0003935","xrefs":{"Monarch":{"xref_id":"0003935"}}}


id: PBO:0056968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 24-2","termid":"PBO:0056968"}


id: GO:0004097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 catechol + O2 = 2 1,2-benzoquinone + 2 H2O. This reaction catalyzes exclusively the oxidation of catechols (i.e., o-diphenols) to the corresponding o-quinones.","definition_xrefs":["PMID:22120533","EC:1.10.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"catechol oxidase activity","secondary_identifiers":["MetaCyc:CATECHOL-OXIDASE-RXN","RHEA:21632","GO:0036264","GO:0102316","GO:0036263"],"synonyms":[{"name":"L-DOPA monooxygenase activity","type":"narrow"},{"name":"L-dopa oxidase activity","type":"narrow"},{"name":"catecholase","type":"exact"},{"name":"diphenol oxidase activity","type":"exact"},{"name":"dopamine monooxygenase activity","type":"narrow"},{"name":"o-diphenol oxidoreductase","type":"exact"},{"name":"o-diphenolase activity","type":"exact"},{"name":"phenolase activity","type":"broad"},{"name":"polyphenol oxidase activity","type":"related"},{"name":"pyrocatechol oxidase","type":"broad"},{"name":"tyrosinase activity","type":"broad"}],"termid":"GO:0004097"}


id: PBO:0071055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 57","termid":"PBO:0071055"}


id: PBO:0057087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 183","termid":"PBO:0057087"}


id: GO:0007052
data:
  {"annotated_genes":["SJAG_04412","SJAG_01837","SJAG_02795","SJAG_00794","SJAG_02286","SJAG_02509","SJAG_01546","SJAG_00930","SJAG_03062","SJAG_01297","SJAG_04841","SJAG_04901","SJAG_02624","SJAG_00244","SJAG_02332","SJAG_02609","SJAG_00773","SJAG_03345","SJAG_02336","SJAG_02246","SJAG_03073","SJAG_01785","SJAG_00078","SJAG_03673","SJAG_03835","SJAG_01215","SJAG_01613","SJAG_04003","SJAG_03540","SJAG_03116","SJAG_01224","SJAG_01805","SJAG_07018","SJAG_02761","SJAG_00514","SJAG_01270","SJAG_04464","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72098,73682,76140,76444,77414,88109,98162,98630,112521,114335],"is_not":false,"summary":null,"term":"GO:0007052"},{"annotations":[76133,78200,95673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[97124,74394,99583,103414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[101351,110969,119059,97226,109989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[75871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[107799,118546,119060],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[103911,100749,95138],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0061805"},{"annotations":[100219,104263,108642,98982,101804,100750,97639],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[99589,101805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[97640,95140,99590,77555,109238],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[111824],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[71947],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"},{"annotations":[115441],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"},{"annotations":[90230],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00930":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01270":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01785":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02246":null,"SJAG_02286":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03345":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000071","GO:0030472","Reactome:R-HSA-9648025","GO:0043148"],"synonyms":[{"name":"mitotic spindle organisation","type":"exact"},{"name":"mitotic spindle organisation in nucleus","type":"narrow"},{"name":"mitotic spindle organization and biogenesis","type":"related"},{"name":"mitotic spindle organization and biogenesis in cell nucleus","type":"narrow"},{"name":"mitotic spindle organization and biogenesis in nucleus","type":"narrow"},{"name":"mitotic spindle organization in nucleus","type":"narrow"},{"name":"mitotic spindle stabilization","type":"related"},{"name":"spindle organization and biogenesis during mitosis","type":"exact"},{"name":"spindle organization and biogenesis in nucleus during mitosis","type":"narrow"}],"termid":"GO:0007052","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0007052":null,"GO:0051228":null,"GO:0051256":null,"GO:0060236":null,"GO:0061804":null,"GO:0061805":null,"GO:0090307":null,"GO:0110161":null,"GO:0110162":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: PR:P23635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P23635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.15","synonyms":[{"name":"Spom972h-ppa1","type":"exact"}],"termid":"PR:P23635"}


id: PBO:0086366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,3-mannosyltransferase; not required for protein O-glycosylation; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086366"}


id: GO:0050626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trimethylamine + 2 (ferricytochrome c)-subunit + H2O = trimethylamine-N-oxide + 2 (ferrocytochrome c)-subunit + 2 H+.","definition_xrefs":["EC:1.7.2.3","MetaCyc:1.7.2.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trimethylamine-N-oxide reductase (cytochrome c) activity","secondary_identifiers":["RHEA:24236","Wikipedia:Trimethylamine_N-oxide_reductase"],"synonyms":[{"name":"TMAO reductase activity","type":"related"},{"name":"TOR activity","type":"related"},{"name":"trimethylamine:cytochrome c oxidoreductase activity","type":"related"}],"termid":"GO:0050626"}


id: PBO:0043570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VII alpha 1 chain","termid":"PBO:0043570"}


id: FYPO:0006897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring contraction is increased. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"},{"relation_name":"is_a","term_name":"increased rate of cytokinesis","termid":"FYPO:0004428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0004803"],"is_obsolete":false,"name":"increased rate of actomyosin contractile ring contraction","synonyms":[{"name":"increased rate of actomyosin contractile ring constriction","type":"exact"},{"name":"increased rate of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased rate of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased rate of contractile ring contraction","type":"exact"},{"name":"increased rate of cytokinetic contractile ring contraction","type":"exact"},{"name":"increased rate of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"increased rate of mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0006897"}


id: GO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a stereocilium.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"stereocilium membrane","termid":"GO:0060171"}


id: PBO:0075422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 8","termid":"PBO:0075422"}


id: PBO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phrenate dehydratase","termid":"PBO:0004336"}


id: MONDO:0011201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 2","secondary_identifiers":["MEDGEN:356087","MESH:C536546","UMLS:C1865810","DOID:0111429","OMIM:602134"],"synonyms":[{"name":"ETM2","type":"exact"},{"name":"essential tremor, hereditary, 2","type":"exact"},{"name":"tremor hereditary essential, 2","type":"related"},{"name":"tremor, hereditary essential, 2","type":"exact"}],"termid":"MONDO:0011201","xrefs":{"Monarch":{"xref_id":"0011201"}}}


id: MONDO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the spinal cord during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood spinal cord tumor","secondary_identifiers":["DOID:3637","UMLS:C1134515","NCIT:C9234","MEDGEN:209512"],"synonyms":[{"name":"childhood spinal cord neoplasm","type":"exact"},{"name":"paediatric spinal cord neoplasm","type":"exact"},{"name":"pediatric spinal cord neoplasm","type":"exact"},{"name":"spinal cord neoplasm of childhood","type":"exact"}],"termid":"MONDO:0002716","xrefs":{"Monarch":{"xref_id":"0002716"}}}


id: PBO:0089058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family endosomal transport protein/Nonaspanin-like","termid":"PBO:0089058"}


id: GO:0090353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of polygalacturonase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0098772","GO:0004857","GO:0003674"],"is_obsolete":false,"name":"polygalacturonase inhibitor activity","termid":"GO:0090353"}


id: GO:1904268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell chemotaxis.","definition_xrefs":["PMID:16203995","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"positive regulation of Schwann cell migration","termid":"GO:1900149"},{"relation_name":"is_a","term_name":"regulation of Schwann cell chemotaxis","termid":"GO:1904266"},{"relation_name":"positively_regulates","term_name":"Schwann cell chemotaxis","termid":"GO:1990751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell chemotaxis","synonyms":[{"name":"activation of Schwann cell chemotaxis","type":"narrow"},{"name":"up regulation of Schwann cell chemotaxis","type":"exact"},{"name":"up-regulation of Schwann cell chemotaxis","type":"exact"},{"name":"upregulation of Schwann cell chemotaxis","type":"exact"}],"termid":"GO:1904268"}


id: GO:0160056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a macropinosome.","definition_xrefs":["PMID:19690049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"macropinosome","termid":"GO:0044354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"macropinosome membrane","termid":"GO:0160056"}


id: MONDO:0044983
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign mesenchymal neoplasm composed of adipose (fatty) tissue. The most common representative of this category is the lipoma.","definition_xrefs":["NCIT:C4502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"tumor of adipose tissue","termid":"MONDO:0021354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"benign lipomatous neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:91084","icd11.foundation:226447034","UMLS:C0346118"],"synonyms":[{"name":"adipose tissue benign connective and soft tissue neoplasm","type":"exact"},{"name":"benign adipose tissue neoplasm","type":"exact"},{"name":"benign adipose tissue tumor","type":"exact"},{"name":"benign adipose tissue tumour","type":"exact"},{"name":"benign connective and soft tissue neoplasm of adipose tissue","type":"exact"},{"name":"benign lipomatous neoplasm","type":"exact"},{"name":"benign lipomatous tumor","type":"exact"},{"name":"benign lipomatous tumour","type":"exact"},{"name":"benign neoplasm of adipose tissue","type":"exact"},{"name":"benign neoplasm of the adipose tissue","type":"exact"},{"name":"benign tumor of adipose tissue","type":"related"},{"name":"benign tumor of the adipose tissue","type":"exact"},{"name":"benign tumour of adipose tissue","type":"related"},{"name":"benign tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0044983","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0044983"}}}


id: PBO:0052584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 2","termid":"PBO:0052584"}


id: PBO:0041231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 53","termid":"PBO:0041231"}


id: PBO:0067956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 258","termid":"PBO:0067956"}


id: GO:0010241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The three successive oxidations of the 4-methyl group of ent-kaurene to form ent-kaur-16-en-19-oate, kaurenoic acid. This process may be carried out entirely by the enzyme ent-kaurene oxidase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ent-kaurene metabolic process","termid":"GO:0033331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-kaurene oxidation to kaurenoic acid","synonyms":[{"name":"ent-kaurene oxidation to ent-kaur-16-en-19-oate","type":"exact"},{"name":"ent-kaurene oxidation to ent-kaurenoate","type":"exact"},{"name":"ent-kaurene oxidation to kaurenoic acid by ent-kaurene oxidase","type":"exact"}],"termid":"GO:0010241"}


id: PBO:0011135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2","termid":"PBO:0011135"}


id: PR:P87304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-coenzyme A thioesterase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03842","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase C31F10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.02","secondary_identifiers":["UniProtKB:P87304"],"synonyms":[{"name":"Spom972h-ACOT13","type":"exact"}],"termid":"PR:P87304"}


id: PBO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 2","termid":"PBO:0044264"}


id: FYPO:0006123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"},{"relation_name":"is_a","term_name":"abnormal protein methylation during vegetative growth","termid":"FYPO:0006122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"abolished asymmetric protein arginine dimethylation during vegetative growth","synonyms":[{"name":"abolished asymmetric protein arginine dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished peptidyl-arginine methylation, to asymmetrical-dimethyl arginine, during vegetative growth","type":"exact"},{"name":"asymmetric protein arginine dimethylation abolished during vegetative growth","type":"exact"},{"name":"asymmetric protein arginine dimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0006123"}


id: PBO:0089563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Tsr2","termid":"PBO:0089563"}


id: FYPO:0002009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is lower than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased oxygen consumption during vegetative growth","synonyms":[{"name":"decreased oxygen consumption during mitotic cell cycle","type":"related"},{"name":"decreased oxygen uptake during vegetative growth","type":"related"},{"name":"reduced oxygen consumption during vegetative growth","type":"exact"}],"termid":"FYPO:0002009"}


id: GO:0004500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ascorbate + dopamine + O2 = (R)-noradrenaline + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.1","RHEA:19117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dopamine beta-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02535","MetaCyc:DOPAMINE-BETA-MONOOXYGENASE-RXN","Reactome:R-HSA-209891"],"synonyms":[{"name":"(3,4-dihydroxyphenethylamine)beta-mono-oxygenase activity","type":"related"},{"name":"3,4-dihydroxyphenethylamine beta-oxidase activity","type":"related"},{"name":"3,4-dihydroxyphenethylamine,ascorbate:oxygen oxidoreductase (beta-hydroxylating)","type":"related"},{"name":"4-(2-aminoethyl)pyrocatechol beta-oxidase activity","type":"related"},{"name":"MDBH (membrane-associated dopamine beta-monooxygenase)","type":"related"},{"name":"SDBH (soluble dopamine beta-monooxygenase)","type":"related"},{"name":"dopa beta-hydroxylase activity","type":"related"},{"name":"dopamine b-hydroxylase activity","type":"exact"},{"name":"dopamine beta-hydroxylase activity","type":"related"},{"name":"dopamine beta-oxidase activity","type":"related"},{"name":"dopamine hydroxylase activity","type":"related"},{"name":"dopamine-B-hydroxylase activity","type":"related"},{"name":"oxygenase, dopamine beta-mono-","type":"related"},{"name":"phenylamine beta-hydroxylase activity","type":"related"}],"termid":"GO:0004500"}


id: GO:1990967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a toxin into, out of or within a cell, or between cells where two or more organisms of the same or different species are involved.","definition_xrefs":["GOC:PARL","PMID:18191792","GOC:bf","PMID:22042847"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism toxin transport (obsolete GO:1990967)","synonyms":[{"name":"typhoid toxin transport","type":"narrow"}],"termid":"GO:1990967"}


id: GO:0102775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 H+ + isovaleryl-CoA + 3 malonyl-CoA = 6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone synthase activity (obsolete GO:0102775)","termid":"GO:0102775"}


id: RO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","termid":"RO:0002348"}


id: RO:HOM0000058
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homocracy that involves recognizably corresponding characters that occurs in two or more taxa, or as a repeated unit within an individual.","definition_xrefs":["DOI:10.1002/1521-1878(200009)22:9<846::AID-BIES10>3.0.CO;2-R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syngeny_relationship_with","synonyms":[{"name":"generative homology","type":"exact"},{"name":"syngenous to","type":"exact"}],"termid":"RO:HOM0000058"}


id: PBO:0003619
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.-","termid":"PBO:0003619"}


id: PBO:0087511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa2p; required for import of long-chain fatty acids into peroxisomes; similar to human adrenoleukodystrophy transporters ABCD1and ABCD2, and ALD-related proteins; mutations in ABCD1 cause X-linked adrenoleukodystrophy (X-ALD), a peroxisomal disorder; human ABCD1 and ABCD2 can each partially complement yeast pxa1 pxa2 double null mutant","termid":"PBO:0087511"}


id: PBO:0051099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-2","termid":"PBO:0051099"}


id: PBO:0057084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181c","termid":"PBO:0057084"}


id: PBO:0052317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143 pseudogene 1","termid":"PBO:0052317"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: PATO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being a cupule, with a structure similar to a cup that also encloses the ovule in partiality.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cup-shaped","termid":"PATO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cupulate","termid":"PATO:0002342"}


id: PR:O74902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC613.02 gene.","definition_xrefs":["UniProtKB:O74902","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C613.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.02","synonyms":[{"name":"Spom972h-SPCC613.02","type":"exact"}],"termid":"PR:O74902"}


id: PBO:0006168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-happens_during","termid":"PBO:0006168"}


id: MONDO:0008382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of retinoschisis.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"retinoschisis, autosomal dominant","secondary_identifiers":["MESH:C000598640","UMLS:C1867235","OMIM:180270","MEDGEN:357940","GARD:9144"],"synonyms":[{"name":"autosomal dominant retinoschisis","type":"exact"},{"name":"retinoschisis autosomal dominant","type":"related"},{"name":"retinoschisis, autosomal dominant","type":"exact"}],"termid":"MONDO:0008382","xrefs":{"Monarch":{"xref_id":"0008382"}}}


id: GO:1902311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:di","PMID:21489137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of copper ion transmembrane transport","synonyms":[{"name":"regulation of copper cation transmembrane transport","type":"exact"},{"name":"regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902311"}


id: PBO:0089902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily","termid":"PBO:0089902"}


id: GO:0072717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an actinomycin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"response to actinomycin D","termid":"GO:0072716"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to actinomycin D","termid":"GO:0072717"}


id: MOD:00026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-threonine.","definition_xrefs":["ChEBI:30013","DeltaMass:0","PubMed:2989287","PubMed:6692818","RESID:AA0017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine residue","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"L-threo-threonine","type":"exact"},{"name":"L-threonine","type":"exact"},{"name":"Thr","type":"exact"},{"name":"alpha-amino-beta-hydroxybutyric acid","type":"exact"},{"name":"beta-methylserine","type":"exact"}],"termid":"MOD:00026"}


id: GO:2000254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male germ cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"regulates","term_name":"male germ cell proliferation","termid":"GO:0002176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male germ cell proliferation","termid":"GO:2000254"}


id: PR:O13739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aro7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.04c","synonyms":[{"name":"CM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aro7","type":"exact"}],"termid":"PR:O13739"}


id: GO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thrombospondin and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thrombospondin receptor activity","termid":"GO:0070053"}


id: PBO:0053914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1209","termid":"PBO:0053914"}


id: CHEBI:28786
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraquat dichloride","termid":"CHEBI:28786"}


id: PATO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity of a process","synonyms":[{"name":"high sensitivity of occurrent","type":"exact"},{"name":"increased sensitivity of occurrent","type":"exact"}],"termid":"PATO:0001551"}


id: PBO:0079239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC12 divergent transcript","termid":"PBO:0079239"}


id: PBO:0002832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Astra associated protein 1 Asa1","termid":"PBO:0002832"}


id: PBO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1","termid":"PBO:0000565"}


id: PR:O74458
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor 3C polypeptide 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23082:SF0","OMA:SCHPO04416","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.14c","secondary_identifiers":["UniProtKB:O74458"],"synonyms":[{"name":"Spom972h-GTF3C3","type":"exact"},{"name":"TFIIIC subunit sfc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74458"}


id: GO:0008507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: iodide(out) + Na+(out) = iodide(in) + Na+(in).","definition_xrefs":["TC:2.A.21.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodide transmembrane transporter activity","termid":"GO:0015111"},{"relation_name":"is_a","term_name":"monoatomic anion:sodium symporter activity","termid":"GO:0015373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sodium:iodide symporter activity","secondary_identifiers":["Reactome:R-HSA-5658195","Reactome:R-HSA-429591"],"synonyms":[{"name":"sodium/iodide symporter activity","type":"exact"}],"termid":"GO:0008507"}


id: GO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (pseudohyphal growth) (obsolete GO:0000193)","synonyms":[{"name":"activation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000193"}


id: GO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a seed trichome. A seed trichome is a trichome that develops from seed coat epidermis and is often long with putative dispersal function.","definition_xrefs":["PMID:17905721","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"trichome differentiation","termid":"GO:0010026"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed trichome differentiation","synonyms":[{"name":"cotton fiber development","type":"narrow"},{"name":"seed hair differentiation","type":"exact"},{"name":"seed trichome development","type":"related"}],"termid":"GO:0090376"}


id: PBO:0091874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter","termid":"PBO:0091874"}


id: PBO:0031168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_amino_acid_import","termid":"PBO:0031168"}


id: GO:0042340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of keratan sulfate proteoglycans, which consist of a core protein linked to a keratan sulfate glycosaminoglycan. The keratan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-beta-(1,3)-galactose, both of which can be sulfated.","definition_xrefs":["PMID:35536982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan catabolic process","termid":"GO:0030167"},{"relation_name":"is_a","term_name":"keratan sulfate proteoglycan metabolic process","termid":"GO:0042339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"keratan sulfate proteoglycan catabolic process","secondary_identifiers":["Reactome:R-HSA-2022857"],"synonyms":[{"name":"keratan sulfate breakdown","type":"exact"},{"name":"keratan sulfate catabolism","type":"exact"},{"name":"keratan sulfate degradation","type":"exact"},{"name":"keratan sulphate catabolic process","type":"exact"},{"name":"keratan sulphate catabolism","type":"exact"}],"termid":"GO:0042340"}


id: GO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:bf","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity (obsolete GO:0004702)","synonyms":[{"name":"receptor signaling protein serine/threonine kinase activity","type":"exact"},{"name":"receptor signalling protein serine/threonine kinase activity","type":"exact"}],"termid":"GO:0004702"}


id: CHEBI:15996
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A purine ribonucleoside 5'-triphosphate that has formula C10H16N5O14P3.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP","termid":"CHEBI:15996"}


id: PBO:0050892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate early response 3 interacting protein 1","termid":"PBO:0050892"}


id: FYPO:0002761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation, which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["GO:0001578","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule bundle formation","synonyms":[{"name":"abnormal microtubule array formation","type":"related"}],"termid":"FYPO:0002761"}


id: GO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043003)","synonyms":[{"name":"activation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"}],"termid":"GO:0043003"}


id: MOD:01208
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal residue to the copper(1+) carboxylate salt.","definition_xrefs":["Unimod:531#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) carboxylate C-terminal residue","synonyms":[{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"},{"name":"cuprous salt","type":"exact"}],"termid":"MOD:01208"}


id: FYPO:0007391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which an aneuploid spore is unable to survive under conditions in which wild type spores survive. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah","PMID:22737087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable aneuploid spore","synonyms":[{"name":"abolished aneuploid spore germination","type":"exact"},{"name":"aneuploid spore germination abolished","type":"exact"},{"name":"decreased aneuploid spore viability","type":"exact"},{"name":"decreased viability of aneuploid cells","type":"related"},{"name":"decreased viability of aneuploid spores","type":"related"},{"name":"lethal in aneuploid spore","type":"related"}],"termid":"FYPO:0007391"}


id: PBO:0047742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 5","termid":"PBO:0047742"}


id: PBO:0054395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1791","termid":"PBO:0054395"}


id: PBO:0074579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stannin","termid":"PBO:0074579"}


id: GO:0086089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an atrial cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:0086089"}


id: MONDO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme heparan sulfate sulfatase. It is characterized by behavioral changes, sleep disturbances, mental developmental delays and seizures.","definition_xrefs":["NCIT:C84897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 3","termid":"MONDO:0018937"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 3A","secondary_identifiers":["UMLS:C0086647","DOID:0111395","OMIM:252900","Orphanet:79269","GARD:7071","icd11.foundation:182200345","SCTID:41572006","NANDO:2201174","MEDGEN:39264","NANDO:1200101"],"synonyms":[{"name":"MPS 3A","type":"related"},{"name":"MPS III A","type":"exact"},{"name":"MPS IIIA","type":"related"},{"name":"MPS3A","type":"exact"},{"name":"MPSIIIA","type":"exact"},{"name":"Sanfilippo A","type":"exact"},{"name":"Sanfilippo syndrome a","type":"exact"},{"name":"Sanfilippo syndrome type A","type":"exact"},{"name":"heparan sulfamidase deficiency","type":"exact"},{"name":"heparan sulfate sulfatase deficiency","type":"related"},{"name":"heparan sulphate sulfatase deficiency","type":"related"},{"name":"heparane sulfamidase deficiency","type":"related"},{"name":"mucopoly-saccharidosis type 3A","type":"related"},{"name":"mucopolysaccharidosis type 3A","type":"exact"},{"name":"mucopolysaccharidosis type IIIA","type":"exact"},{"name":"mucopolysaccharidosis type IIIA (Sanfilippo A)","type":"exact"},{"name":"mucopolysaccharidosis, type 3A","type":"related"},{"name":"mucopolysaccharidosis, type IIIA","type":"related"},{"name":"sulfamidase deficiency","type":"related"}],"termid":"MONDO:0009655","xrefs":{"Monarch":{"xref_id":"0009655"}}}


id: PBO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding subunit 3","termid":"PBO:0060610"}


id: PR:O74778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- btb2 gene.","definition_xrefs":["UniProtKB:O74778","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.06c","synonyms":[{"name":"Spom972h-btb2","type":"exact"}],"termid":"PR:O74778"}


id: PBO:0086459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metalloendopeptidase; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086459"}


id: GO:0010781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which double-strand breaks are generated at defined hotspots throughout the genome during meiosis I resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA double-strand break formation involved in meiotic gene conversion","termid":"GO:0010781"}


id: GO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate junction assembly","termid":"GO:0090109"}


id: GO:0031965
data:
  {"annotated_genes":["SJAG_03491","SJAG_01745","SJAG_05196","SJAG_01538","SJAG_02425","SJAG_02885","SJAG_00680","SJAG_05226","SJAG_03251","SJAG_03449","SJAG_03657","SJAG_01737","SJAG_03299","SJAG_01374","SJAG_03715","SJAG_00810","SJAG_01263","SJAG_03783","SJAG_03892","SJAG_03837","SJAG_01356","SJAG_00790","SJAG_00471","SJAG_01422","SJAG_01460","SJAG_00054"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60602,67393,76913,89357,89780,89861,91303,91869,92300,93455,97069,103821,109964,111239,115289,119604,119606],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[118565,103178,70758,94197,78086,103772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005637"},{"annotations":[76467,117950],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"},{"annotations":[88877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"}]},"cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.","definition_xrefs":["GOC:mah","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00471":null,"SJAG_00680":null,"SJAG_00790":null,"SJAG_00810":null,"SJAG_01263":null,"SJAG_01356":null,"SJAG_01374":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01538":null,"SJAG_01737":null,"SJAG_01745":null,"SJAG_02425":null,"SJAG_02885":null,"SJAG_03251":null,"SJAG_03299":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03657":null,"SJAG_03715":null,"SJAG_03783":null,"SJAG_03837":null,"SJAG_03892":null,"SJAG_05196":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao1687101204"],"termid":"GO:0031965","terms_by_termid":{"GO:0000093":null,"GO:0005637":null,"GO:0005640":null,"GO:0031965":null,"GO:1990862":null}}


id: GO:0008926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:MANNPDEHYDROG-RXN","RHEA:19661"],"termid":"GO:0008926"}


id: MONDO:0001292
data:
  {"annotated_genes":["SJAG_01895","SJAG_02398","SJAG_03163","SJAG_00260","SJAG_01671","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[87527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","definition":"A disease involving the autonomic nervous system.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autonomic neuropathy","termid":"MONDO:0001300"},{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"autonomic nervous system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009532","MEDGEN:218837","SCTID:128123007","ICD9:337.9","DOID:11465","ICD9:337.1","MESH:D001342","SCTID:15241006","UMLS:C1145628"],"synonyms":[{"name":"ANS (autonomic nervous system) diseases","type":"related"},{"name":"ANS disease","type":"related"},{"name":"ANS diseases","type":"related"},{"name":"autonomic central nervous system diseases","type":"related"},{"name":"autonomic disease","type":"related"},{"name":"autonomic diseases","type":"related"},{"name":"autonomic dysfunction, segmental","type":"related"},{"name":"autonomic dysfunctions, segmental","type":"related"},{"name":"autonomic nervous disease","type":"exact"},{"name":"autonomic nervous system disease","type":"exact"},{"name":"autonomic nervous system disease or disorder","type":"exact"},{"name":"autonomic nervous system disorder","type":"exact"},{"name":"autonomic nervous system disorders","type":"related"},{"name":"autonomic peripheral nervous system diseases","type":"narrow"},{"name":"central autonomic nervous system diseases","type":"related"},{"name":"disease of autonomic nervous system","type":"exact"},{"name":"disease or disorder of autonomic nervous system","type":"exact"},{"name":"disorder of autonomic nervous system","type":"exact"},{"name":"disorder of peripheral autonomic nervous system","type":"exact"},{"name":"disorder of the autonomic nervous system","type":"exact"},{"name":"disorders of the autonomic nervous system","type":"related"},{"name":"dysautonomia","type":"narrow"},{"name":"nervous system diseases, autonomic","type":"related"},{"name":"nervous system diseases, sympathetic","type":"related"},{"name":"peripheral autonomic nervous system diseases","type":"narrow"},{"name":"segmental autonomic dysfunction","type":"related"},{"name":"segmental autonomic dysfunctions","type":"related"}],"termid":"MONDO:0001292","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0001292"}}}


id: FYPO:0001190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more enzymes that degrades cell wall polysaccharides. Cells stop growing (and may die) at a concentration of such enzymes that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001191"],"synonyms":[{"name":"hypersensitive to cell wall-degrading enzymes","type":"exact"},{"name":"sensitive to Lyticase","type":"narrow"},{"name":"sensitive to Novozyme 234","type":"narrow"},{"name":"sensitive to Zymolyase","type":"narrow"},{"name":"sensitive to beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"sensitive to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"sensitive to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"sensitive to lysing enzymes from Trichoderma harzianum","type":"narrow"}],"termid":"FYPO:0001190"}


id: GO:1990137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RH + ROOH = ROH + ROH.","definition_xrefs":["EC:1.11.2.3","PMID:19467604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"plant seed peroxygenase activity","secondary_identifiers":["MetaCyc:RXN-11819"],"synonyms":[{"name":"peroxygenase activity","type":"broad"},{"name":"plant seed peroxidase activity","type":"related"}],"termid":"GO:1990137"}


id: GO:0070906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aspartate(out) + alanine(in) = aspartate(in) + alanine(out).","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"aspartate:alanine antiporter activity","secondary_identifiers":["RHEA:33139"],"synonyms":[{"name":"aspartate-alanine antiporter activity","type":"exact"},{"name":"aspartate/alanine antiporter activity","type":"exact"}],"termid":"GO:0070906"}


id: GO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of undifferentiated metanephric mesenchymal cells (precursors to metanephric mesangial cells) from the mesenchyme into the cleft of the developing glomerulus, during development of the metanephros.","definition_xrefs":["PMID:19019919","PMID:10734101","GOC:bf","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in metanephros development","termid":"GO:0035788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchymal cell migration","synonyms":[{"name":"metanephric mesenchyme chemotaxis","type":"narrow"}],"termid":"GO:0035789"}


id: GO:1901037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed during the M/G1 transition of the mitotic cell cycle.","definition_xrefs":["PMID:12411492","GOC:mtg_cell_cycle","GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle (obsolete GO:1901037)","synonyms":[{"name":"global transcription regulation from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of global transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of transcription during M/G1 transition of mitotic cell cycle","type":"broad"},{"name":"regulation of transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in M/G1 transition of mitotic cell cycle","type":"related"}],"termid":"GO:1901037"}


id: PBO:0035807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_hydroxyurea","termid":"PBO:0035807"}


id: GO:0019603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form p-hydroxybenzoate; the first step in the pathway is the oxidation of toluene to form 4-hydroxytoluene (4-cresol).","definition_xrefs":["MetaCyc:TOLUENE-DEG-4-OH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via 4-hydroxytoluene","termid":"GO:0019603"}


id: GO:0016806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of N-terminal di- or tripeptides from a polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase and tripeptidyl-peptidase activity (obsolete GO:0016806)","synonyms":[{"name":"dipeptidyl-peptidase and tripeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0016806"}


id: GO:0044448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell cortex, the region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cortex part (obsolete GO:0044448)","termid":"GO:0044448"}


id: PBO:0051836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase cinema","termid":"PBO:0051836"}


id: PBO:0090183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, FAD Flx1","termid":"PBO:0090183"}


id: GO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.","definition_xrefs":["EC:3.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.23-RXN","Reactome:R-HSA-9840795","Reactome:R-HSA-2090079","Reactome:R-HSA-1605624","Reactome:R-HSA-1793217","Reactome:R-HSA-1606312","Reactome:R-HSA-1630306","Reactome:R-HSA-2265534","Reactome:R-HSA-9036061"],"synonyms":[{"name":"beta-D-galactanase activity","type":"related"},{"name":"beta-D-galactoside galactohydrolase activity","type":"related"},{"name":"beta-D-lactosidase activity","type":"related"},{"name":"beta-lactosidase activity","type":"related"},{"name":"exo-(1->4)-beta-D-galactanase activity","type":"related"},{"name":"hydrolact","type":"related"}],"termid":"GO:0004565"}


id: PBO:0089895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron/zinc ion transmembrane transporter","termid":"PBO:0089895"}


id: PBO:0084343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lanosterol 14-alpha-demethylase; catalyzes C-14 demethylation of lanosterol to form 4,4''-dimethyl cholesta-8,14,24-triene-3-beta-ol in ergosterol biosynthesis pathway; transcriptionally down-regulated when ergosterol is in excess; member of cytochrome P450 family; associated and coordinately regulated with the P450 reductase Ncp1p; human CYP51A1 functionally complements the lethality of the erg11 null mutation","termid":"PBO:0084343"}


id: GO:1901397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta2 activation (obsolete GO:1901397)","synonyms":[{"name":"activation of TGF-beta 2 activation","type":"exact"},{"name":"activation of TGFB2 activation","type":"exact"},{"name":"activation of TGFbeta 2 activation","type":"exact"},{"name":"activation of transforming growth factor beta2 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 2 activation","type":"exact"},{"name":"positive regulation of TGFB2 activation","type":"exact"},{"name":"positive regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of TGF-beta 2 activation","type":"exact"},{"name":"up regulation of TGFB2 activation","type":"exact"},{"name":"up regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"up-regulation of TGF-beta 2 activation","type":"exact"},{"name":"up-regulation of TGFB2 activation","type":"exact"},{"name":"up-regulation of TGFbeta 2 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"upregulation of TGF-beta 2 activation","type":"exact"},{"name":"upregulation of TGFB2 activation","type":"exact"},{"name":"upregulation of TGFbeta 2 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta2 activation","type":"exact"}],"termid":"GO:1901397"}


id: FYPO:0003322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase (ubiquinone) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}


id: PBO:0077872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 3","termid":"PBO:0077872"}


id: PBO:0080294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 58 pseudogene","termid":"PBO:0080294"}


id: GO:0071410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cyclopentenone","termid":"GO:0010583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyclopentenone","termid":"GO:0071410"}


id: PBO:0042365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD163 molecule like 1","termid":"PBO:0042365"}


id: GO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen in association with an MHC class Ib protein complex on its cell surface, including lipid extraction, degradation, and transport steps for the lipid antigen both prior to and following assembly with the MHC protein complex. The lipid antigen may originate from an endogenous or exogenous source of lipid. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["GOC:add","PMID:10375559","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, lipid antigen","type":"exact"},{"name":"lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048003"}


id: PBO:0036088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity_during_nitrogen_starvation","termid":"PBO:0036088"}


id: GO:1990611
data:
  {"annotated_genes":["SJAG_02592","SJAG_04383","SJAG_00690","SJAG_03869","SJAG_00169","SJAG_00786","SJAG_01942","SJAG_04873","SJAG_02072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95588,103695,104325],"is_not":false,"summary":null,"term":"GO:1990611"},{"annotations":[110053,116007,75603,94728,99693,70356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of cytoplasmic translational initiation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:16278445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation in response to stress","termid":"GO:1990497"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990611","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: MONDO:0100155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive, multisystem condition caused by pathogenic variants of the PNPLA6 gene, encoding the patatin like phospholipase domain containing 6 protein. RAPH syndrome is characterized by hypogonadism, cerebellar ataxia, retinal dystrophy, peripheral neuropathy, growth hormone deficiency, and cognitive impairment. Additional clinical features may include lower limb spasticity, trichomegaly, alopecia, and facial dismorphism. The term lumps Boucher-Neuhauser, Gordon Holmes, Laurence-Moon, and Oliver-McFarlene syndromes.","definition_xrefs":["PMID:35069422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy-ataxia-pituitary hormone abnormality-hypogonadism syndrome","synonyms":[{"name":"RAPH syndrome","type":"exact"}],"termid":"MONDO:0100155","xrefs":{"Monarch":{"xref_id":"0100155"}}}


id: PBO:0048327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 38","termid":"PBO:0048327"}


id: GO:0102336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: stearoyl-CoA(4-) + malonyl-CoA(5-) + H+ = 3-oxoicosanoyl-CoA. + carbon dioxide + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-arachidoyl-CoA synthase activity (obsolete GO:0102336)","termid":"GO:0102336"}


id: PBO:0039595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosmin 2, pseudogene","termid":"PBO:0039595"}


id: PBO:0046681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog C","termid":"PBO:0046681"}


id: PBO:0043805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase M","termid":"PBO:0043805"}


id: GO:0010670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0010670)","synonyms":[{"name":"positive regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0010670"}


id: PBO:0005285
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential for RNA Silencing","termid":"PBO:0005285"}


id: GO:0003858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + H+ + NADH.","definition_xrefs":["EC:1.1.1.30","RHEA:20521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01361","MetaCyc:3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN","Reactome:R-HSA-73920","Reactome:R-HSA-5696457","Reactome:R-HSA-73912"],"synonyms":[{"name":"D-beta-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0003858"}


id: PBO:0056688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 9","termid":"PBO:0056688"}


id: MONDO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hernia of ovary and fallopian tube (obsolete MONDO:0001578)","secondary_identifiers":["DOID:12735","ICD9:620.4"],"termid":"MONDO:0001578","xrefs":{"Monarch":{"xref_id":"0001578"}}}


id: PBO:0054707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2116","termid":"PBO:0054707"}


id: PBO:0034034
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_publication_date","termid":"PBO:0034034"}


id: MONDO:0024633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kidney damage that results from chronically elevated blood pressure; complications include glomerular damage resulting in proteinuria and hematuria.","definition_xrefs":["NCIT:C4757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypertensive nephropathy","secondary_identifiers":["SCTID:38481006","UMLS:C0848548","ICD9:403.90","MEDGEN:167258","MESH:C563161","OMIM:608026"],"synonyms":[{"name":"HNP1","type":"exact"},{"name":"hypertensive nephropathy","type":"exact"},{"name":"hypertensive renal disease","type":"exact"}],"termid":"MONDO:0024633","xrefs":{"Monarch":{"xref_id":"0024633"}}}


id: PBO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase (predicted)","termid":"PBO:0003029"}


id: GO:1903997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GOC:BHF","GOC:nc","GO_REF:0000059","PMID:10518561","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of non-membrane spanning protein tyrosine kinase activity (obsolete GO:1903997)","synonyms":[{"name":"activation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"narrow"},{"name":"activation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"activation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"activation of focal adhesion kinase activity","type":"narrow"},{"name":"activation of janus kinase 1 activity","type":"narrow"},{"name":"activation of janus kinase 2 activity","type":"narrow"},{"name":"activation of janus kinase 3 activity","type":"narrow"},{"name":"activation of non-membrane spanning protein tyrosine kinase activity","type":"narrow"},{"name":"activation of non-specific protein-tyrosine kinase activity","type":"narrow"},{"name":"activation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"positive regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of focal adhesion kinase activity","type":"narrow"},{"name":"positive regulation of janus kinase 1 activity","type":"narrow"},{"name":"positive regulation of janus kinase 2 activity","type":"narrow"},{"name":"positive regulation of janus kinase 3 activity","type":"narrow"},{"name":"positive regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"positive regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"up regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"up regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"up regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"up regulation of focal adhesion kinase activity","type":"narrow"},{"name":"up regulation of janus kinase 1 activity","type":"narrow"},{"name":"up regulation of janus kinase 2 activity","type":"narrow"},{"name":"up regulation of janus kinase 3 activity","type":"narrow"},{"name":"up regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"up regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"up regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"up-regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of focal adhesion kinase activity","type":"narrow"},{"name":"up-regulation of janus kinase 1 activity","type":"narrow"},{"name":"up-regulation of janus kinase 2 activity","type":"narrow"},{"name":"up-regulation of janus kinase 3 activity","type":"narrow"},{"name":"up-regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"up-regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"up-regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"upregulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"upregulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"upregulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"upregulation of focal adhesion kinase activity","type":"narrow"},{"name":"upregulation of janus kinase 1 activity","type":"narrow"},{"name":"upregulation of janus kinase 2 activity","type":"narrow"},{"name":"upregulation of janus kinase 3 activity","type":"narrow"},{"name":"upregulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"upregulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"upregulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903997"}


id: PBO:0114533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone (ATP-dependent) Abo2","termid":"PBO:0114533"}


id: PBO:0058399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4771-1","termid":"PBO:0058399"}


id: PBO:0065476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 13","termid":"PBO:0065476"}


id: PBO:0109604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A11","termid":"PBO:0109604"}


id: GO:0051553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavones, a class of pigmented plant compounds based on 2-phenyl-4H-1-benzopyran-4-one (2-phenylchromone).","definition_xrefs":["GOC:ai","PMID:18567791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavone biosynthetic process","synonyms":[{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthesis","type":"narrow"},{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthetic process","type":"narrow"},{"name":"2-phenylchromone biosynthesis","type":"narrow"},{"name":"2-phenylchromone biosynthetic process","type":"narrow"}],"termid":"GO:0051553"}


id: SO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group II intron that recognizes IBS1/EBS1 and IBS2/EBS2 for the 5-prime exon and gamma/gamma-prime for the 3-prime exon.","definition_xrefs":["PMID:20463000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"group_II_intron","termid":"SO:0000603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_IIA_intron","synonyms":[{"name":"group IIA intron","type":"exact"}],"termid":"SO:0000381"}


id: GO:2000858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"},{"relation_name":"regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of aldosterone secretion","termid":"GO:2000858"}


id: GO:0006812
data:
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id: PBO:0083604
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id: MONDO:0010877
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id: PBO:0088143
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id: PBO:0072016
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id: GO:0002428
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id: PBO:0027513
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id: GO:0018150
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id: GO:1901735
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id: GO:0019829
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id: PR:O14009
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id: MONDO:0005155
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id: PR:Q9USK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ipk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-pentakisphosphate 2-kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.10c","synonyms":[{"name":"Ins(1,3,4,5,6)P5 2-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"InsP5 2-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ipk1","type":"exact"},{"name":"inositol-1,3,4,5,6-pentakisphosphate 2-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK0"}


id: PBO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cu metalloregulatory transcription factor Cuf2 (predicted)","termid":"PBO:0005533"}


id: GO:0102071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,10-epoxy-18-hydroxystearate + H2O = 9,10,18-trihydroxystearate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,10-epoxy-18-hydroxystearate hydrolase activity (obsolete GO:0102071)","termid":"GO:0102071"}


id: MOD:00292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-pyruvic acid 2-iminyl-L-lysine.","definition_xrefs":["PubMed:1463470","PubMed:7853400","Unimod:422#K","PubMed:9047371","RESID:AA0287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"pyruvic acid iminylated residue","termid":"MOD:01170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-pyruvic acid 2-iminyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([1-carboxyethylidene]amino)hexanoic acid","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with substrate","type":"exact"},{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"N6-pyruvic acid 2-iminyl-L-lysine","type":"exact"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:00292"}


id: PBO:0077690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 2","termid":"PBO:0077690"}


id: PBO:0028713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_meiosis_I","termid":"PBO:0028713"}


id: GO:0035010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Events resulting in the formation of a multilayered cellular sheath surrounding an invader and thus preventing its development. This defense mechanism is often seen in insects in response to nematodes or parasitoids, which are too large to be phagocytosed by individual hemocytes. In some organisms the capsule is blackened due to melanization.","definition_xrefs":["PMID:11846478","GO_REF:0000022","PMID:12225920","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encapsulation of foreign target","termid":"GO:0035010"}


id: GO:0035871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K11-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 11 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["PMID:21596315","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K11-linked deubiquitination","synonyms":[{"name":"protein K11-linked deubiquitinylation","type":"exact"},{"name":"protein K11-linked deubiquitylation","type":"exact"}],"termid":"GO:0035871"}


id: GO:0140438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a stearoyl group to an amino acid in a protein.","definition_xrefs":["PMID:26214738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein stearoylation","termid":"GO:0140438"}


id: MONDO:0009565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intellectual deficit, marfanoid habitus, microcephaly, and glomerulonephritis.","definition_xrefs":["Orphanet:2172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-glomerulonephritis-marfanoid habitus syndrome","secondary_identifiers":["OMIM:248760","GARD:3615","UMLS:C1855348","MEDGEN:343327","MESH:C565411"],"synonyms":[{"name":"MARFANOID habitus with microcephaly and glomerulonephritis","type":"related"},{"name":"microcephaly glomerulonephritis Marfanoid habitus","type":"related"}],"termid":"MONDO:0009565","xrefs":{"Monarch":{"xref_id":"0009565"}}}


id: GO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of leukocyte mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11911826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"negatively_regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"down regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"down-regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"downregulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"inhibition of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001911"}


id: PBO:0087033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L16A; N-terminally acetylated, binds 5.8 S rRNA; transcriptionally regulated by Rap1p; homologous to mammalian ribosomal protein L13A and bacterial L13; RPL16A has a paralog, RPL16B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087033"}


id: PBO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-V, dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase (predicted)","termid":"PBO:0000274"}


id: PBO:0052846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-2","termid":"PBO:0052846"}


id: PBO:0085724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p to the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm; contains an SH3 domain and a Ptc1p binding domain (PBM)","termid":"PBO:0085724"}


id: GO:0035404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a serine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-serine phosphorylation (obsolete GO:0035404)","synonyms":[{"name":"histone serine phosphorylation","type":"exact"}],"termid":"GO:0035404"}


id: MONDO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of gonococcal salpingitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic salpingitis","termid":"MONDO:0003617"},{"relation_name":"is_a","term_name":"gonococcal salpingitis","termid":"MONDO:0021159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gonococcal salpingitis","secondary_identifiers":["icd11.foundation:1233448408","DOID:12718","ICD9:098.37","UMLS:C0153208","SCTID:53529004","MEDGEN:509205"],"synonyms":[{"name":"gonococcal salpingitis","type":"broad"},{"name":"gonococcal salpingitis, chronic","type":"exact"}],"termid":"MONDO:0001575","xrefs":{"Monarch":{"xref_id":"0001575"}}}


id: PBO:0073749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A4 regulator","termid":"PBO:0073749"}


id: MONDO:0017305
data:
  {"annotated_genes":["SJAG_00938","SJAG_02453","SJAG_03011","SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87387,87386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008962"},{"annotations":[86482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[86342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"}]},"cv_name":"mondo","definition":"A oculocutaneous albinism that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of melanin metabolism","termid":"MONDO:0018134"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00938":null,"SJAG_02453":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"syndromic oculocutaneous albinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E70.3","GARD:21125","UMLS:C5681016","MEDGEN:1843078","Orphanet:284811"],"synonyms":[{"name":"syndrome associated with oculocutaneous albinism","type":"exact"},{"name":"syndromic oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0017305","terms_by_termid":{"MONDO:0008962":null,"MONDO:0011997":null,"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0017305"}}}


id: PBO:0046117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2 pseudogene 1","termid":"PBO:0046117"}


id: MONDO:0021388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the chest wall.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of chest wall","secondary_identifiers":["NCIT:C4929","SCTID:126640008","ICD9:239.89","MEDGEN:220935","UMLS:C1290309"],"synonyms":[{"name":"chest wall neoplasm","type":"exact"},{"name":"chest wall neoplasm (disease)","type":"exact"},{"name":"chest wall tumor","type":"exact"},{"name":"chest wall tumour","type":"exact"},{"name":"neoplasm of chest wall","type":"exact"},{"name":"neoplasm of the chest wall","type":"exact"},{"name":"tumor of chest wall","type":"exact"},{"name":"tumor of the chest wall","type":"exact"},{"name":"tumour of chest wall","type":"exact"},{"name":"tumour of the chest wall","type":"exact"}],"termid":"MONDO:0021388","xrefs":{"Monarch":{"xref_id":"0021388"}}}


id: PBO:0108594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG2 AAA ATPase homolog B","termid":"PBO:0108594"}


id: PATO:0001369
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a colony by virtue of the bearer's appearing above the medium surface with terraced edges.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raised","termid":"PATO:0001369"}


id: PBO:0076636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 3","termid":"PBO:0076636"}


id: GO:0016008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation; the major mitochondrial derivative is ovoid and darker than the minor derivative.","definition_xrefs":["PMID:17123504","PMID:24211517","PMID:30802236","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"major mitochondrial derivative","termid":"GO:0016008"}


id: PBO:0029553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_ethyl_methanesulfonate","termid":"PBO:0029553"}


id: FYPO:0007251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid binding","termid":"FYPO:0007250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased lipid binding","synonyms":[{"name":"reduced lipid binding","type":"exact"}],"termid":"FYPO:0007251"}


id: PBO:0090538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11","termid":"PBO:0090538"}


id: MONDO:0016220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital temporomandibular joint ankylosis is a rare maxillofacial disorder characterized by significant reduction in mouth opening (i.e. from a few millimeters to a few centimeters) in the absence of acquired factors (e.g. trauma, infection) contributing to the ankylosis. It is associated with variable degrees of facial dysmorphism (i.e. lateral deviation of the mandible and chin, lower facial asymmetry, retrognathia, micrognathia, dental malocclusion) and patients typically present with feeding and breathing difficulties. Developmental delay, hypotonia, seizures, and additional dysmorphic features (e.g. pectus excavatum, low-set ears, hypoplastic alae nasi) have also been reported.","definition_xrefs":["Orphanet:210576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankylosis","termid":"MONDO:0002257"},{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital temporomandibular joint ankylosis","secondary_identifiers":["SCTID:763215008","UMLS:C4706319","GARD:20450","MEDGEN:1638477"],"synonyms":[{"name":"congenital trismus","type":"exact"}],"termid":"MONDO:0016220","xrefs":{"Monarch":{"xref_id":"0016220"}}}


id: PBO:0064092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNM family member 3","termid":"PBO:0064092"}


id: GO:1904629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:19765580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diterpene","termid":"GO:1904629"}


id: PBO:0083686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase, a phosphopyruvate hydratase; catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate; complements the growth defect of an ENO1 ENO2 double mutant in glucose","termid":"PBO:0083686"}


id: PBO:0043989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 3","termid":"PBO:0043989"}


id: PBO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complements S. cerevisiae RPB6","termid":"PBO:0016579"}


id: GO:0061066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nematode larval development","termid":"GO:0061063"},{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"positively_regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dauer larval development","termid":"GO:0061066"}


id: GO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric oxide mediated signal transduction","termid":"GO:0010749"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"negative regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010751"}


id: MONDO:0006035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of gastric adenocarcinoma characterized by prominent dilated or slit-like tubules.","definition_xrefs":["NCIT:C5473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"},{"relation_name":"is_a","term_name":"tubular adenocarcinoma","termid":"MONDO:0005606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric tubular adenocarcinoma","secondary_identifiers":["EFO:1000030","MEDGEN:234303","DOID:6595","ONCOTREE:TSTAD","UMLS:C1333791"],"synonyms":[{"name":"gastric tubular adenocarcinoma","type":"exact"},{"name":"stomach tubular adenocarcinoma","type":"exact"},{"name":"tubular adenocarcinoma of stomach","type":"exact"},{"name":"tubular adenocarcinoma of the stomach","type":"exact"},{"name":"tubular stomach adenocarcinoma","type":"related"}],"termid":"MONDO:0006035","xrefs":{"Monarch":{"xref_id":"0006035"}}}


id: PBO:0040938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 9","termid":"PBO:0040938"}


id: MONDO:0018282
data:
  {"annotated_genes":["SJAG_03188","SJAG_04316","SJAG_01491","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87026,87027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[86213,86215,86214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[87021,87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[87025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[86306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[87024,87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of alpha-dystroglycan","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21601","UMLS:C2936406","MEDGEN:423526","Orphanet:371024"],"synonyms":[{"name":"alpha-dystroglycanopathy","type":"exact"},{"name":"dystroglycanopathy","type":"exact"}],"termid":"MONDO:0018282","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0018282"}}}


id: FYPO:0006480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cohesin loading is normal (i.e. indistinguishable from wild type). Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["GO:0071921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"protein localization phenotype","termid":"FYPO:0002333"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal cohesin loading","synonyms":[{"name":"normal cohesin association with chromatin","type":"exact"},{"name":"normal cohesin localisation to chromatin","type":"exact"},{"name":"normal cohesin localization to chromatin","type":"exact"}],"termid":"FYPO:0006480"}


id: MONDO:0015138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic primary immunodeficiency (obsolete MONDO:0015138)","secondary_identifiers":["MedDRA:10064859"],"synonyms":[{"name":"primary immunodeficiency","type":"related"}],"termid":"MONDO:0015138","xrefs":{"Monarch":{"xref_id":"0015138"}}}


id: MONDO:0011945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal Gaucher disease is the perinatal lethal form of Gaucher disease (GD).","definition_xrefs":["Orphanet:85212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease","termid":"MONDO:0018150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0005328","MONDO:0002525"],"is_obsolete":false,"name":"Gaucher disease perinatal lethal","secondary_identifiers":["GARD:10675","MEDGEN:374996","MESH:C564306","SCTID:870313002","OMIM:608013","UMLS:C1842704","DOID:0110960"],"synonyms":[{"name":"Gaucher disease collodion type","type":"exact"},{"name":"Gaucher disease perinatal lethal","type":"exact"},{"name":"Gaucher disease, collodion type","type":"exact"},{"name":"Gaucher disease, perinatal lethal","type":"exact"},{"name":"Gaucher disease, perinatal-lethal form","type":"exact"},{"name":"Gaucher's disease perinatal lethal","type":"exact"},{"name":"fetal Gaucher disease","type":"exact"},{"name":"foetal Gaucher disease","type":"exact"},{"name":"perinatal lethal Gaucher disease","type":"exact"}],"termid":"MONDO:0011945","xrefs":{"Monarch":{"xref_id":"0011945"}}}


id: PBO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR5A antisense RNA 1","termid":"PBO:0050796"}


id: PBO:0091144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mini protein, single membrane pass Min8, meiosis specific splicing in fission yeast","termid":"PBO:0091144"}


id: MONDO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete recurrent corneal erosion (obsolete MONDO:0001306)","secondary_identifiers":["ICD9:371.42","DOID:11541","SCTID:2055003","HP:0000495"],"synonyms":[{"name":"recurrent erosion of cornea","type":"exact"},{"name":"recurrent erosion syndrome","type":"exact"}],"termid":"MONDO:0001306","xrefs":{"Monarch":{"xref_id":"0001306"}}}


id: PBO:0077739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin XB","termid":"PBO:0077739"}


id: MONDO:0100450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant vitreoretinopathy caused by variants in the CAPN5 gene. Additional features, such as developmental delay and hypotonia, have been reported in some patients.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"},{"relation_name":"is_a","term_name":"proliferative vitreoretinopathy","termid":"MONDO:0700115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CAPN5-related vitreoretinopathy","secondary_identifiers":["SCTID:770791000","MEDGEN:1648542","UMLS:C4721549","GARD:17497","OMIM:193235","MESH:D018630","MedDRA:10057896","DOID:9719","ICD9:362.29","Orphanet:329211","SCTID:232016005"],"synonyms":[{"name":"ADNIV","type":"exact"},{"name":"CAPN5 vitreoretinopathy","type":"exact"},{"name":"VRNI","type":"exact"},{"name":"autosomal dominant neovascular inflammatory vitreoretinopathy","type":"exact"},{"name":"proliferative vitreoretinopathy","type":"broad"},{"name":"retinitis proliferans","type":"exact"},{"name":"vitreoretinopathy, neovascular inflammatory","type":"exact"},{"name":"vitreoretinopathy, neovascular inflammatory, autosomal dominant","type":"exact"}],"termid":"MONDO:0100450","xrefs":{"Monarch":{"xref_id":"0100450"}}}


id: MONDO:0015234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arachnodactyly - abnormal ossification - intellectual disability is a multiple congenital developmental anomalies syndrome characterized by arachnodactyly of fingers and toes associated with craniofacial dysmorphism (including abnormal cranial ossification, frontal bossing, flat calvaria, shallow deformed orbits resulting in exophtalmos, midface hypoplasia and micrognathia), feeding difficulties in infancy, infantile muscular hypotonia, and developmental delay leading to intellectual disability.","definition_xrefs":["Orphanet:1129"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnodactyly-abnormal ossification-intellectual disability syndrome","secondary_identifiers":["MEDGEN:419792","SCTID:720501007","UMLS:C2931398","MESH:C537024","GARD:381"],"synonyms":[{"name":"Kosztolanyi syndrome","type":"exact"},{"name":"arachnodactyly, abnormal ossification and intellectual disability","type":"related"},{"name":"arachnodactyly, abnormal ossification and mental retardation","type":"related"}],"termid":"MONDO:0015234","xrefs":{"Monarch":{"xref_id":"0015234"}}}


id: MONDO:1010997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy, non-human animal","termid":"MONDO:1010235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, cattle","secondary_identifiers":["OMIA:000939-9913"],"termid":"MONDO:1010997","xrefs":{"Monarch":{"xref_id":"1010997"}}}


id: PBO:0038880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCY6 divergent transcript","termid":"PBO:0038880"}


id: GO:0033638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the response of its host to heat acclimation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:35350854","PMID:17425405","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host response to abiotic stimulus","termid":"GO:0033635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host heat acclimation","synonyms":[{"name":"modulation by symbiont of host heat acclimation","type":"exact"},{"name":"modulation by symbiont of host response to heat","type":"related"},{"name":"response to heat shock","type":"related"}],"termid":"GO:0033638"}


id: PBO:0028200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028200"}


id: GO:0047708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biotin amide + H2O = biotin + NH3.","definition_xrefs":["MetaCyc:BIOTINIDASE-RXN","EC:3.5.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"biotinidase activity","secondary_identifiers":["Reactome:R-HSA-3325540","Reactome:R-HSA-4225086","Reactome:R-HSA-3076905","Reactome:R-HSA-4167509","RHEA:13081"],"synonyms":[{"name":"amidohydrolase biotinidase activity","type":"related"},{"name":"biotin-amide amidohydrolase activity","type":"related"}],"termid":"GO:0047708"}


id: PBO:0004915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT4 subfamily","termid":"PBO:0004915"}


id: GO:1901309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of sterol regulatory element binding protein cleavage.","definition_xrefs":["PMID:15899885","PMID:16525117","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sterol regulatory element binding protein cleavage (obsolete GO:1901309)","synonyms":[{"name":"down regulation of SREBP cleavage","type":"exact"},{"name":"down regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"down-regulation of SREBP cleavage","type":"exact"},{"name":"down-regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"downregulation of SREBP cleavage","type":"exact"},{"name":"downregulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"inhibition of SREBP cleavage","type":"exact"},{"name":"inhibition of SREBP processing","type":"exact"},{"name":"inhibition of sterol regulatory element binding protein cleavage","type":"narrow"},{"name":"negative regulation of SREBP cleavage","type":"exact"}],"termid":"GO:1901309"}


id: PBO:0065666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRN2 antisense RNA 1","termid":"PBO:0065666"}


id: GO:2000935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"positively_regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellotriose metabolic process","synonyms":[{"name":"positive regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000935"}


id: MONDO:0100105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder resulting from fragility of cerebral vessels causing an increased risk of intracranial bleeding. The resultant phenotype is highly variable depending on timing and location of the intracranial bleed. Some patients may have onset in utero or early infancy, with subsequent global developmental delay, spasticity, and porencephaly on brain imaging. Other patients may have normal or mildly delayed development with sudden onset of intracranial hemorrhage causing acute neurologic deterioration.","definition_xrefs":["OMIM:618360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial porencephaly","termid":"MONDO:0020496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain small vessel disease 3","secondary_identifiers":["MEDGEN:1677948","DOID:0112315","UMLS:C5193053"],"synonyms":[{"name":"BSVD3","type":"exact"}],"termid":"MONDO:0100105","xrefs":{"Monarch":{"xref_id":"0100105"}}}


id: PBO:0111934
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family 6","termid":"PBO:0111934"}


id: GO:0031069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hair follicle are generated and organized.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"hair cycle process","termid":"GO:0022405"},{"relation_name":"part_of","term_name":"hair follicle development","termid":"GO:0001942"},{"relation_name":"part_of","term_name":"epidermis morphogenesis","termid":"GO:0048730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle morphogenesis","termid":"GO:0031069"}


id: PBO:0034578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell","termid":"PBO:0034578"}


id: GO:0060847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"endothelial cell fate commitment","termid":"GO:0060839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell fate specification","termid":"GO:0060847"}


id: PBO:0039502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 26","termid":"PBO:0039502"}


id: PBO:0046669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen-related receptor alpha pseudogene 1","termid":"PBO:0046669"}


id: FYPO:0008290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a guanyl-nucleotide exchange factor activity is absent.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"abnormal guanyl-nucleotide exchange factor activity","termid":"FYPO:0008289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished guanyl-nucleotide exchange factor activity","synonyms":[{"name":"abolished GEF activity","type":"exact"}],"termid":"FYPO:0008290"}


id: GO:0120511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl (2E,6E)-farnesoate + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + juvenile hormone III + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:23586995","PMID:38741075","RHEA:43728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methyl farnesoate epoxidase activity","secondary_identifiers":["MetaCyc:RXN-11621","EC:1.14.14.127"],"synonyms":[{"name":"CYP15A1 activity","type":"related"}],"termid":"GO:0120511"}


id: FYPO:0001692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to purvalanol A. Cells stop growing (and may die) at a concentration of purvalanol A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to purvalanol A","synonyms":[{"name":"hypersensitive to purvalanol A","type":"exact"},{"name":"sensitive to purvalanol A during mitotic cell cycle","type":"related"},{"name":"sensitive to purvalanol A during vegetative growth","type":"exact"}],"termid":"FYPO:0001692"}


id: GO:0061945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of protein K-48-linked ubiquitination, a protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:23460740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K48-linked ubiquitination","termid":"GO:0070936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K48-linked ubiquitination","termid":"GO:0061945"}


id: PBO:0113257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral peroxisomal membrane protein; required for Vps1-dependent peroxisome fission but not Dnm1-dependent fission; functions to control peroxisome size and number; interacts with Vps1p and Pex25p; accumulates at peroxisomal membrane constrictions; PEX27 has a paralog, PEX25, that arose from the whole genome duplication","termid":"PBO:0113257"}


id: PR:Q09861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29E6.07 gene.","definition_xrefs":["UniProtKB:Q09861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29E6.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.07","synonyms":[{"name":"Spom972h-SPAC29E6.07","type":"exact"}],"termid":"PR:Q09861"}


id: RO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Is_bouton_to","termid":"RO:0002106"}


id: GO:1901020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion transmembrane transporter activity","synonyms":[{"name":"down regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"down-regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"downregulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"inhibition of calcium ion transmembrane transporter activity","type":"narrow"}],"termid":"GO:1901020"}


id: PBO:0065617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A3","termid":"PBO:0065617"}


id: MONDO:0012945
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87137],"is_not":false,"summary":null,"term":"MONDO:0012945"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the FIG4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:393399","MESH:C567244","DOID:0060202","UMLS:C2675491","GARD:10496","OMIM:612577"],"synonyms":[{"name":"ALS11","type":"exact"},{"name":"FIG4 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 11","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in FIG4","type":"exact"},{"name":"amyotrophic lateral sclerosis type 11","type":"exact"}],"termid":"MONDO:0012945","terms_by_termid":{"MONDO:0012945":null},"xrefs":{"Monarch":{"xref_id":"0012945"}}}


id: MONDO:0010388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rolandic epilepsy-speech dyspraxia syndrome","termid":"MONDO:0015587"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"rolandic epilepsy, intellectual disability, and speech dyspraxia, X-linked","secondary_identifiers":["MEDGEN:337150","MESH:C564467","UMLS:C1845070","OMIM:300643","GARD:18282"],"synonyms":[{"name":"RESDX","type":"related"},{"name":"ROLANDIC epilepsy, intellectual disability, and speech dyspraxia, X-linked","type":"related"},{"name":"ROLANDIC epilepsy, mental retardation, and speech dyspraxia, X-linked","type":"related"},{"name":"rolandic epilepsy, impaired intellectual development, and speech dyspraxia","type":"exact"},{"name":"rolandic epilepsy, intellectual disability, and speech dyspraxia, X-linked","type":"exact"},{"name":"rolandic epilepsy, mental retardation, and speech dyspraxia, X-linked","type":"exact"}],"termid":"MONDO:0010388","xrefs":{"Monarch":{"xref_id":"0010388"}}}


id: PBO:0110361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC2 pseudogene 1","termid":"PBO:0110361"}


id: PBO:0068126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 433","termid":"PBO:0068126"}


id: PBO:0089806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any2","termid":"PBO:0089806"}


id: PBO:0052966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1 type transposase domain containing 1","termid":"PBO:0052966"}


id: GO:0000963
data:
  {"annotated_genes":["SJAG_00077","SJAG_04885","SJAG_00797","SJAG_02288","SJAG_06586","SJAG_04113","SJAG_04700","SJAG_02302","SJAG_00865","SJAG_02526","SJAG_00255","SJAG_04377","SJAG_01704","SJAG_00358","SJAG_04367","SJAG_00997","SJAG_02991","SJAG_03104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103973],"is_not":false,"summary":null,"term":"GO:0000963"},{"annotations":[104296,96611,90314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[110278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[114820,71104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[79566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[70525,80710,118316,88085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[78470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[75895,119012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[94627,117351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[93158,76583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The conversion of a primary RNA molecule transcribed from a mitochondrial genome into one or more mature RNA molecules; occurs in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02526":null,"SJAG_02991":null,"SJAG_03104":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04377":null,"SJAG_04700":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial RNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000963","terms_by_termid":{"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:1990180":null,"GO:1990799":null}}


id: PBO:0108599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulates_characteristic","termid":"PBO:0108599"}


id: PBO:0034057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_closure_of","termid":"PBO:0034057"}


id: PBO:0060097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 44","termid":"PBO:0060097"}


id: PBO:0077388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 128","termid":"PBO:0077388"}


id: PBO:0039976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4D","termid":"PBO:0039976"}


id: PBO:0082128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions; monomeric actin in the nucleus plays a role in INO80 chromatin remodeling","termid":"PBO:0082128"}


id: GO:0019977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-21.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-21 binding","synonyms":[{"name":"IL-21 binding","type":"exact"}],"termid":"GO:0019977"}


id: MONDO:0003837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma or carcinoma of the anterior lobe of the pituitary gland that produces thyrotropin.","definition_xrefs":["NCIT:C7915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSH producing pituitary tumor","secondary_identifiers":["DOID:6275","SCTID:254959007","MEDGEN:391700","UMLS:C2362538"],"synonyms":[{"name":"TSH producing neoplasm of pituitary","type":"exact"},{"name":"TSH producing neoplasm of pituitary gland","type":"exact"},{"name":"TSH producing neoplasm of the pituitary","type":"exact"},{"name":"TSH producing neoplasm of the pituitary gland","type":"exact"},{"name":"TSH producing pituitary gland neoplasm","type":"exact"},{"name":"TSH producing pituitary gland tumor","type":"exact"},{"name":"TSH producing pituitary gland tumour","type":"exact"},{"name":"TSH producing pituitary neoplasm","type":"exact"},{"name":"TSH producing pituitary tumor","type":"exact"},{"name":"TSH producing tumor of pituitary","type":"exact"},{"name":"TSH producing tumor of pituitary gland","type":"exact"},{"name":"TSH producing tumor of the pituitary","type":"exact"},{"name":"TSH producing tumor of the pituitary gland","type":"exact"},{"name":"TSH producing tumour of pituitary","type":"exact"},{"name":"TSH producing tumour of pituitary gland","type":"exact"},{"name":"TSH producing tumour of the pituitary","type":"exact"},{"name":"TSH producing tumour of the pituitary gland","type":"exact"},{"name":"TSH secreting adenoma of the pituitary","type":"narrow"},{"name":"TSH secreting neoplasm of pituitary","type":"exact"},{"name":"TSH secreting neoplasm of pituitary gland","type":"exact"},{"name":"TSH secreting neoplasm of the pituitary","type":"exact"},{"name":"TSH secreting neoplasm of the pituitary gland","type":"exact"},{"name":"TSH secreting pituitary gland neoplasm","type":"exact"},{"name":"TSH secreting pituitary gland tumor","type":"exact"},{"name":"TSH secreting pituitary gland tumour","type":"exact"},{"name":"TSH secreting pituitary neoplasm","type":"exact"},{"name":"TSH secreting pituitary tumor","type":"exact"},{"name":"TSH secreting pituitary tumour","type":"exact"},{"name":"TSH secreting tumor of pituitary","type":"exact"},{"name":"TSH secreting tumor of pituitary gland","type":"exact"},{"name":"TSH secreting tumor of the pituitary","type":"exact"},{"name":"TSH secreting tumor of the pituitary gland","type":"exact"},{"name":"TSH secreting tumour of pituitary","type":"exact"},{"name":"TSH secreting tumour of pituitary gland","type":"exact"},{"name":"TSH secreting tumour of the pituitary","type":"exact"},{"name":"TSH secreting tumour of the pituitary gland","type":"exact"},{"name":"TSH-oma","type":"related"},{"name":"TSH-producing pituitary gland neoplasm","type":"exact"},{"name":"TSH-producing pituitary gland tumor","type":"exact"},{"name":"TSH-producing pituitary gland tumour","type":"exact"},{"name":"thyroid stimulating hormone producing neoplasm of pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing neoplasm of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone producing neoplasm of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing neoplasm of the pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary gland neoplasm","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary gland tumor","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary gland tumour","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary neoplasm","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary tumor","type":"exact"},{"name":"thyroid stimulating hormone producing pituitary tumour","type":"exact"},{"name":"thyroid stimulating hormone producing tumor","type":"exact"},{"name":"thyroid stimulating hormone producing tumor of pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing tumor of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone producing tumor of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing tumor of the pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone producing tumour","type":"exact"},{"name":"thyroid stimulating hormone producing tumour of pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing tumour of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone producing tumour of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone producing tumour of the pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting neoplasm of pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting neoplasm of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting neoplasm of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting neoplasm of the pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary gland neoplasm","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary gland tumor","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary gland tumour","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary neoplasm","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary tumor","type":"exact"},{"name":"thyroid stimulating hormone secreting pituitary tumour","type":"exact"},{"name":"thyroid stimulating hormone secreting tumor of pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting tumor of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting tumor of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting tumor of the pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting tumour of pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting tumour of pituitary gland","type":"exact"},{"name":"thyroid stimulating hormone secreting tumour of the pituitary","type":"exact"},{"name":"thyroid stimulating hormone secreting tumour of the pituitary gland","type":"exact"},{"name":"thyrotroph adenoma","type":"narrow"},{"name":"thyrotropin producing pituitary gland neoplasm","type":"exact"},{"name":"thyrotropin-secreting pituitary adenoma","type":"related"}],"termid":"MONDO:0003837","xrefs":{"Monarch":{"xref_id":"0003837"}}}


id: PBO:0089040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase, Adh1-like","termid":"PBO:0089040"}


id: PBO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope integral membrane protein 1","termid":"PBO:0060876"}


id: GO:0047461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + (+)-delta-cadinene.","definition_xrefs":["EC:4.2.3.13","MetaCyc:4.6.1.11-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-delta-cadinene synthase activity","secondary_identifiers":["RHEA:19525"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, (+)-delta-cadinene-forming)","type":"related"},{"name":"D-cadinene synthase activity","type":"related"}],"termid":"GO:0047461"}


id: GO:0030027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lamellipodium","secondary_identifiers":["Wikipedia:Lamellipodia"],"termid":"GO:0030027"}


id: FYPO:0007901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal.","definition_xrefs":["PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of R-loops","synonyms":[{"name":"increased level of R-loops","type":"exact"},{"name":"increased level of RNA-DNA hybrids","type":"exact"}],"termid":"FYPO:0007901"}


id: PBO:0034482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_polarity","termid":"PBO:0034482"}


id: GO:0044692
data:
  {"annotated_genes":["SJAG_04682","SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90057,105291],"is_not":false,"summary":null,"term":"GO:0044692"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an exoribonuclease.","definition_xrefs":["PMID:22570495","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease activator activity","termid":"GO:0170054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"exoribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044692","terms_by_termid":{"GO:0044692":null}}


id: MOD:01942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-aspartic acid.","definition_xrefs":["ChEBI:48094","PubMed:9384562","RESID:AA0190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01942"}


id: PBO:0045435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 3","termid":"PBO:0045435"}


id: GO:0060757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior by which an adult locates food.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult foraging behavior","termid":"GO:0060757"}


id: GO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine, guanine riboside, a nucleoside with a wide species distribution.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine metabolic process","termid":"GO:0008617"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"guanosine catabolic process","secondary_identifiers":["GO:0006160"],"synonyms":[{"name":"guanosine breakdown","type":"exact"},{"name":"guanosine catabolism","type":"exact"},{"name":"guanosine degradation","type":"exact"},{"name":"guanosine phosphorolysis","type":"related"}],"termid":"GO:0046115"}


id: GO:0005696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of DNA and protein that seals the end of a chromosome. The telomeric DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA.","definition_xrefs":["ISBN:0198506732","PMID:11352055"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere (obsolete GO:0005696)","synonyms":[{"name":"telomere","type":"exact"}],"termid":"GO:0005696"}


id: MONDO:0023368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate, micrognathia, Wormian bones, congenital heart disease, dislocated hips, absent tibiae, bowed fibulae, preaxial polydactyly of the feet","definition_xrefs":["GARD:0001266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ho-Kaufman-McAlister syndrome","secondary_identifiers":["UMLS:C2931819","MEDGEN:419170","MESH:C538325"],"synonyms":[{"name":"Ho Kaufman McAlister syndrome","type":"related"},{"name":"cleft palate, micrognathia, Wormian bones, congenital heart disease, dislocated hips, absent tibiae, bowed fibulae, preaxial polydactyly of the feet","type":"related"}],"termid":"MONDO:0023368","xrefs":{"Monarch":{"xref_id":"0023368"}}}


id: PR:O74828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ESF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12202:SF0","OMA:SCHPO02698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.01c","secondary_identifiers":["UniProtKB:O74828"],"synonyms":[{"name":"Spom972h-ESF1","type":"exact"}],"termid":"PR:O74828"}


id: PBO:0054521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1921","termid":"PBO:0054521"}


id: SO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating, using the hosts cellular machinery, often circular nucleic acid molecule that is distinct from a chromosome in the organism.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid","synonyms":[{"name":"plasmid sequence","type":"exact"}],"termid":"SO:0000155"}


id: GO:1900291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of galactotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"galactotriose transport","termid":"GO:2001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of galactotriose transport","termid":"GO:1900291"}


id: PBO:0060509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAPA antisense RNA 1","termid":"PBO:0060509"}


id: PR:P0CT58
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2201 gene.","definition_xrefs":["UniProtKB:P0CT58","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.04c","synonyms":[{"name":"Spom972h-rps2201","type":"exact"}],"termid":"PR:P0CT58"}


id: PBO:0069328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 587, pseudogene","termid":"PBO:0069328"}


id: PBO:0075655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 4","termid":"PBO:0075655"}


id: MONDO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient complete or partial monocular blindness due to retinal ischemia. This may be caused by emboli from the CAROTID ARTERY (usually in association with CAROTID STENOSIS) and other locations that enter the central RETINAL ARTERY. (From Adams et al., Principles of Neurology, 6th ed, p245)","definition_xrefs":["MESH:D020757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amaurosis fugax","secondary_identifiers":["NCIT:C84550","MEDGEN:57702","UMLS:C0149793","icd11.foundation:691084626","SCTID:88032003"],"synonyms":[{"name":"amaurosis fugax","type":"exact"},{"name":"amaurosis fugax (one sided temporary vision loss)","type":"related"},{"name":"blindness, monocular, transient","type":"related"},{"name":"blindness, transient monocular","type":"related"},{"name":"momentary blindness","type":"related"},{"name":"monocular blindness, transient","type":"related"},{"name":"transient monocular blindness","type":"related"}],"termid":"MONDO:0043310","xrefs":{"Monarch":{"xref_id":"0043310"}}}


id: MONDO:0014789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"CCDC115-CDG","secondary_identifiers":["OMIM:616828","UMLS:C4225191","GARD:17845","MEDGEN:906792","DOID:0070267","Orphanet:468684"],"synonyms":[{"name":"CDG IIo","type":"related"},{"name":"CDG syndrome type IIo","type":"exact"},{"name":"CDG-IIo","type":"exact"},{"name":"CDG2O","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIo","type":"exact"},{"name":"congenital disorder of glycosylation type 2o","type":"exact"},{"name":"congenital disorder of glycosylation type IIo","type":"exact"},{"name":"congenital disorder of glycosylation, type IIo","type":"exact"}],"termid":"MONDO:0014789","xrefs":{"Monarch":{"xref_id":"0014789"}}}


id: GO:0098543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from another organism is received and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of other organism","secondary_identifiers":["GO:0051824"],"synonyms":[{"name":"recognition of other organism during symbiotic interaction","type":"narrow"},{"name":"recognition of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0098543"}


id: MONDO:0023696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease with similar features to Marinesco-Sjogren syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marinesco-Sjogren-like syndrome","secondary_identifiers":["MEDGEN:163207","MESH:C535913","OMIM:248810","UMLS:C0796036"],"synonyms":[{"name":"Marinesco-Sjogren-like syndrome (MSLS)","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, intellectual disability, and myopathy","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, mental retardation, and myopathy","type":"related"}],"termid":"MONDO:0023696","xrefs":{"Monarch":{"xref_id":"0023696"}}}


id: PBO:0088758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 associated protein Utp25","termid":"PBO:0088758"}


id: PBO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 5","termid":"PBO:0048743"}


id: MONDO:0009429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemia, renal, with intracerebral calcifications","secondary_identifiers":["UMLS:C1855809","MEDGEN:383776","MESH:C565478","OMIM:241519"],"synonyms":[{"name":"hypophosphatemia, renal, with intracerebral calcifications","type":"exact"}],"termid":"MONDO:0009429","xrefs":{"Monarch":{"xref_id":"0009429"}}}


id: GO:0006817
data:
  {"annotated_genes":["SJAG_01033","SJAG_04241","SJAG_00233","SJAG_04990","SJAG_00547","SJAG_01059"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[116180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[110082,113119,116898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[99753],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phosphate ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate transport","type":"related"}],"termid":"GO:0006817","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: MONDO:0700267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the BARD1 gene. Germline pathogenic or likely pathogenic variants in the BARD1 gene confer a moderate risk of breast cancer, inherited in an autosomal dominant pattern, increasingly documented to be specific to triple negative breast cancer in women. BARD1 cancer susceptibility syndrome is also associated with other tumour types including neuroblastoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARD1-related cancer predisposition","termid":"MONDO:0700267","xrefs":{"Monarch":{"xref_id":"0700267"}}}


id: PBO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033781"}


id: PBO:0085715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in sporulation; required for the construction of the outer spore wall layers; required for proper localization of Spo14p","termid":"PBO:0085715"}


id: PBO:0085990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for respiratory growth; YDL237W is not an essential gene","termid":"PBO:0085990"}


id: GO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete herbicide susceptibility/resistance (obsolete GO:0019837)","synonyms":[{"name":"herbicide susceptibility/resistance","type":"exact"}],"termid":"GO:0019837"}


id: PBO:0029523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029523"}


id: GO:0061320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a pericardial nephrocyte. A pericardial nephrocyte is an insect renal cell that filters hemolymph and is found with other pericardial nephrocytes in two rows flanking the dorsal vessel. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:19783135","GOC:sart","CL:0000474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardial nephrocyte differentiation","secondary_identifiers":["GO:0007513"],"synonyms":[{"name":"pericardial cell differentiation","type":"narrow"}],"termid":"GO:0061320"}


id: PBO:0086478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; IAI11 has a paralog, YER093C-A, that arose from the whole genome duplication","termid":"PBO:0086478"}


id: PBO:0083631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein; involved in regulating phosphatidylinositol 4,5-bisphosphate levels and autophagy; Irs4p and Tax4p bind and activate the PtdIns phosphatase Inp51p; Irs4p and Tax4p are involved in localizing Atg17p to the PAS; TAX4 has a paralog, IRS4, that arose from the whole genome duplication","termid":"PBO:0083631"}


id: PBO:0030610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_calcium_level","termid":"PBO:0030610"}


id: PBO:0075402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17 pseudogene 1","termid":"PBO:0075402"}


id: GO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels.","definition_xrefs":["PMID:8974333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor activity","termid":"GO:0016917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"GABA-A receptor activity","synonyms":[{"name":"ionotropic GABA receptor activity","type":"exact"}],"termid":"GO:0004890"}


id: PBO:0046152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome-lysosome associated apoptosis and autophagy regulator family member 2","termid":"PBO:0046152"}


id: MONDO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon, aggressive malignant smooth muscle neoplasm. It is characterized by the presence of atypical large spindle or round cells, nuclear palisading, tumor cell necrosis, mitotic figures and may be associated with vascular invasion.","definition_xrefs":["NCIT:C9428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"conventional leiomyosarcoma","secondary_identifiers":["DOID:5253","UMLS:C1333157","MEDGEN:232394"],"synonyms":[{"name":"classic leiomyosarcoma","type":"exact"},{"name":"conventional leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003348","xrefs":{"Monarch":{"xref_id":"0003348"}}}


id: PBO:0060449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear assembly factor 1 ribonucleoprotein","termid":"PBO:0060449"}


id: MONDO:0000568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the central nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"autoimmune disorder of the nervous system","termid":"MONDO:0002977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of central nervous system","secondary_identifiers":["EFO:0020092","DOID:0060004"],"synonyms":[{"name":"central nervous system autoimmune disease","type":"exact"},{"name":"central nervous system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000568","xrefs":{"Monarch":{"xref_id":"0000568"}}}


id: GO:1905634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to chromatin.","definition_xrefs":["GOC:TermGenie","PMID:20889714","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to chromatin","synonyms":[{"name":"regulation of protein localisation to chromatin","type":"exact"}],"termid":"GO:1905634"}


id: PBO:0056096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 1","termid":"PBO:0056096"}


id: PBO:0029325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA","termid":"PBO:0029325"}


id: MOD:01971
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-ornithine.","definition_xrefs":["PubMed:23434852","RESID:AA0613","ChEBI:136763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl N2-ornithine","synonyms":[{"name":"(2S)-5-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanoic acid","type":"exact"},{"name":"(2S)-5-amino-2-[(4S)-4-amino-4-carboxybutanamido]pentanoic acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-ketovaleric acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl N2-ornithine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-ornithine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-ornithine","type":"exact"},{"name":"N2-(gamma-glutamyl)ornithine","type":"exact"},{"name":"gamma-glutamylornithine","type":"exact"}],"termid":"MOD:01971"}


id: MONDO:0005529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methylmalonic aciduria and homocystinuria type cblG (obsolete MONDO:0005529)","termid":"MONDO:0005529","xrefs":{"Monarch":{"xref_id":"0005529"}}}


id: PBO:0003883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase subunit H (predicted)","termid":"PBO:0003883"}


id: MONDO:0010353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by severe bilateral deafness, intellectual deficit, umbilical hernia and abnormal dermatoglyphics. It has been described in three males from three generations of one family. Mild facial dysmorphism (telangiectasias, hypertelorism, dental anomalies and a wide nasal root) was also present. Short stature, pancytopaenia, microcephaly, and renal and genitourinary anomalies were present in some of the patients. The mode of transmission is X-linked recessive and the causative gene has been localized to the q1-21 region of the X chromosome.","definition_xrefs":["Orphanet:85321"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-intellectual disability, Martin-Probst type syndrome","secondary_identifiers":["DOID:0060830","MESH:C564495","GARD:16750","MEDGEN:375620","OMIM:300519","UMLS:C1845285","SCTID:721087008"],"synonyms":[{"name":"MRXSMP","type":"related"},{"name":"Martin-Probst deafness-intellectual disability syndrome","type":"related"},{"name":"Martin-Probst deafness-mental retardation syndrome","type":"related"},{"name":"Martin-Probst syndrome","type":"exact"},{"name":"X-linked deafness-intellectual disability syndrome syndrome","type":"exact"},{"name":"deafness-intellectual disability syndrome, Martin-Probst type","type":"related"},{"name":"intellectual disability, X-linked, syndromic, MARTIN-Probst type","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Martin-Probst type","type":"exact"},{"name":"martin-probst syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, syndromic, MARTIN-Probst type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Martin-Probst type","type":"exact"}],"termid":"MONDO:0010353","xrefs":{"Monarch":{"xref_id":"0010353"}}}


id: PR:Q09763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gef1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.09","synonyms":[{"name":"Spom972h-gef1","type":"exact"}],"termid":"PR:Q09763"}


id: PBO:0048476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 3","termid":"PBO:0048476"}


id: GO:1904907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:rph","GOC:TermGenie","PMID:26373281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904907"}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0040477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN1 antisense RNA 1","termid":"PBO:0040477"}


id: SO:0001996
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of intronic sequence within 10 bases of an exon.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_intronic_splice_region","synonyms":[{"name":"extended intronic splice region ","type":"exact"}],"termid":"SO:0001996"}


id: PBO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin (predicted)","termid":"PBO:0000552"}


id: PBO:0055633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3072","termid":"PBO:0055633"}


id: MONDO:0015103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary valve agenesis-tetralogy of Fallot-absence of ductus arteriosus syndrome is a rare congenital heart malformation characterized by a tetralogy of Fallot (pulmonary stenosis, overriding aorta, ventricular septal defect and right ventricular hypertrophy), complete absence or rudimentary pulmonary valve that is both stenotic and regurgitant and an absence of the ductus arteriosus. It presents prenatally with cardiomegaly, polyhydramnios, fetal heart failure, hydrops fetalis and fetal demise or postnatally with cyanosis and respiratory failure due to bronchomalacia secondary to bronchial compression from dilated pulmonary arteries. It is frequently associated with 22q11 deletion.","definition_xrefs":["Orphanet:101206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve agenesis","termid":"MONDO:0020064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary valve agenesis-tetralogy of fallot-absence of ductus arteriosus syndrome","secondary_identifiers":["UMLS:C4707896","GARD:19780","MEDGEN:1644090"],"synonyms":[{"name":"APV/ADA, Fallot type","type":"exact"},{"name":"PVA/ADA, Fallot type","type":"exact"},{"name":"absence of pulmonary valve-Fallot tetralogy-absence of ductus arteriosus syndrome","type":"exact"}],"termid":"MONDO:0015103","xrefs":{"Monarch":{"xref_id":"0015103"}}}


id: PBO:0038751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 1B","termid":"PBO:0038751"}


id: GO:0033953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,3-alpha-L-galactosidic linkages in agarose, yielding agarotetraose as the major product.","definition_xrefs":["EC:3.2.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-agarase activity","secondary_identifiers":["MetaCyc:3.2.1.158-RXN"],"synonyms":[{"name":"agarase A33 activity","type":"narrow"},{"name":"agarase activity","type":"broad"},{"name":"agarose 3-glycanohydrolase activity","type":"broad"}],"termid":"GO:0033953"}


id: MONDO:1012646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of nephritis that occurs in dogs.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis, dog","termid":"MONDO:1011045"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant nephritis, dog","secondary_identifiers":["OMIA:001114-9615"],"synonyms":[{"name":"Alport syndrome, dog","type":"related"},{"name":"nephritis, autosomal dominant","type":"exact"}],"termid":"MONDO:1012646","xrefs":{"Monarch":{"xref_id":"1012646"}}}


id: PBO:0046849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 12","termid":"PBO:0046849"}


id: PBO:0054102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1461","termid":"PBO:0054102"}


id: GO:0021812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between neuronal cells and glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["PMID:12626695","GOC:jid","GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neuronal-glial interaction involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021812"}


id: GO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral whorl are generated and organized.","definition_xrefs":["GOC:PO_curators","PO:0025023","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"floral whorl development","termid":"GO:0048438"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl morphogenesis","secondary_identifiers":["GO:0048414"],"termid":"GO:0048457"}


id: PBO:0014248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint ubiquitin ligase Dma1","termid":"PBO:0014248"}


id: MONDO:1010337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopia, non-human animal","secondary_identifiers":["OMIA:001487"],"termid":"MONDO:1010337","xrefs":{"Monarch":{"xref_id":"1010337"}}}


id: GO:0021772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0878937420","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"olfactory lobe development","termid":"GO:0021988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb development","termid":"GO:0021772"}


id: GO:0030339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-acyl ethyl ester + H2O = a long-chain carboxylic acid + ethanol.","definition_xrefs":["EC:3.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"fatty-acyl-ethyl-ester synthase activity","secondary_identifiers":["RHEA:16641","MetaCyc:FATTY-ACYL-ETHYL-ESTER-SYNTHASE-RXN"],"synonyms":[{"name":"FAEE synthase activity","type":"related"},{"name":"FAEES activity","type":"related"},{"name":"fatty-acyl ethyl ester synthase","type":"exact"},{"name":"long-chain-fatty-acyl-ethyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0030339"}


id: GO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of testicular cells, an organelle derived from the spectrosome.","definition_xrefs":["GOC:mah","ISBN:0879694238","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"testicular fusome organization","synonyms":[{"name":"testicular fusome organisation","type":"exact"},{"name":"testicular fusome organization and biogenesis","type":"related"}],"termid":"GO:0030724"}


id: GO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a chitin-containing cuticle to the epithelium underlying it. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040005"}


id: GO:0062010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the primitive palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive palate development","termid":"GO:0062010"}


id: GO:2001000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xylan catabolic process","synonyms":[{"name":"regulation of xylan breakdown","type":"exact"},{"name":"regulation of xylan catabolism","type":"exact"},{"name":"regulation of xylan degradation","type":"exact"}],"termid":"GO:2001000"}


id: PBO:0028738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hercynylcysteine_sulfoxide_absent_from_cell","termid":"PBO:0028738"}


id: GO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["PMID:10578051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty-acyl-CoA catabolic process","synonyms":[{"name":"fatty-acyl-CoA breakdown","type":"exact"},{"name":"fatty-acyl-CoA catabolism","type":"exact"},{"name":"fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036115"}


id: MONDO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant pleural mesothelioma","termid":"MONDO:0005112"},{"relation_name":"is_a","term_name":"sarcomatoid mesothelioma","termid":"MONDO:0006407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphohistiocytoid mesothelioma","secondary_identifiers":["MEDGEN:235269","UMLS:C1334464","NCIT:C27779","DOID:7381"],"termid":"MONDO:0004205","xrefs":{"Monarch":{"xref_id":"0004205"}}}


