# terms

id: PBO:0117079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLIN3 antisense RNA 1","termid":"PBO:0117079"}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: MONDO:0004506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises in a terminal ductal lobular unit. It is characterized by the presence of a fibrovascular core that is lined by benign epithelial and myoepithelial proliferations. Peripheral breast papillomas are often multiple and are usually found microscopically. Patients are often asymptomatic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microscopic breast papilloma","secondary_identifiers":["DOID:8225","MEDGEN:233851","NCIT:C36088","UMLS:C1335390"],"synonyms":[{"name":"microscopic breast papilloma","type":"exact"},{"name":"peripheral breast papilloma","type":"exact"}],"termid":"MONDO:0004506","xrefs":{"Monarch":{"xref_id":"0004506"}}}


id: MONDO:0045013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the extraembryonic membrane.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of extraembryonic membrane","secondary_identifiers":["MEDGEN:783294","SCTID:609522002","UMLS:C3662139"],"synonyms":[{"name":"disease of extraembryonic membrane","type":"exact"},{"name":"disease or disorder of extraembryonic membrane","type":"exact"},{"name":"disorder of extraembryonic membrane","type":"exact"},{"name":"extraembryonic membrane disease","type":"exact"},{"name":"extraembryonic membrane disease or disorder","type":"exact"}],"termid":"MONDO:0045013","xrefs":{"Monarch":{"xref_id":"0045013"}}}


id: MONDO:0019903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 2 syndrome is a rare chromosomal anomaly syndrome with highly variable phenotype principally characterized by intrauterine growth retardation, failure to thrive, developmental delay, hypotonia, mild dysmorphic features (incl. microcephaly, short forehead, upslanting palpebral fissures, hypertelorism, epicanthal folds, wide nasal bridge, broad nasal tip, long philtrum, thin upper lip, micrognathia, short neck), skeletal anomalies (e.g. kyphosis, brachydactyly, clinodactyly, talipes equinovarus) and dermatological features (i.e. café-au-lait spots). Patients may also present ventriculoseptal defects and genital abnormalities (e.g. genital hypoplasia, phimosis, cryptorchidism).","definition_xrefs":["Orphanet:96171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 2","secondary_identifiers":["SCTID:765485000","UMLS:C4707448","NCIT:C121981","GARD:10837","MEDGEN:1642621"],"synonyms":[{"name":"R2","type":"related"},{"name":"Ring 2","type":"related"},{"name":"Ring chromosome 2 syndrome","type":"related"},{"name":"Ring chromosome type 2","type":"exact"},{"name":"chromosome 2 ring","type":"related"},{"name":"rose cluster 2","type":"exact"}],"termid":"MONDO:0019903","xrefs":{"Monarch":{"xref_id":"0019903"}}}


id: GO:1902291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA ligation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle DNA replication DNA ligation (obsolete GO:1902291)","synonyms":[{"name":"DNA ligation involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902291"}


id: GO:0010897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:tb","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride catabolic process","termid":"GO:0010896"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"},{"relation_name":"negatively_regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride catabolic process","synonyms":[{"name":"negative regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010897"}


id: PBO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engrailed homeobox 2","termid":"PBO:0046302"}


id: GO:0044412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host (obsolete GO:0044412)","synonyms":[{"name":"growth or development of organism within host","type":"exact"},{"name":"growth or development of symbiont in host","type":"exact"},{"name":"growth or development of symbiont within host","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0044412"}


id: MONDO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute serous otitis media caused by an allergen.","definition_xrefs":["DOID:11558","PMID:15301306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute serous otitis media","termid":"MONDO:0001312"},{"relation_name":"is_a","term_name":"allergic otitis media","termid":"MONDO:0021202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute allergic serous otitis media","secondary_identifiers":["SCTID:59275002","ICD9:381.04","UMLS:C0155418","MEDGEN:509956"],"termid":"MONDO:0001313","xrefs":{"Monarch":{"xref_id":"0001313"}}}


id: PBO:0091926
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091926"}


id: PBO:0062182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 3B pseudogene","termid":"PBO:0062182"}


id: PBO:0083206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL065C/DLS1","termid":"PBO:0083206"}


id: MONDO:0011817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any coronary artery disease in which the cause of the disease is a mutation in the CX3CR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary heart disease, susceptibility to, 1","secondary_identifiers":["OMIM:607339","MEDGEN:375884","UMLS:C1846418"],"synonyms":[{"name":"CX3CR1 coronary artery disease","type":"exact"},{"name":"Chds1","type":"related"},{"name":"coronary artery disease caused by mutation in CX3CR1","type":"exact"},{"name":"coronary artery disease, resistance to","type":"exact"},{"name":"coronary heart disease, susceptibility to","type":"exact"},{"name":"coronary heart disease, susceptibility to, 1","type":"exact"},{"name":"coronary heart disease, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011817","xrefs":{"Monarch":{"xref_id":"0011817"}}}


id: MONDO:0020309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Landau-Kleffner syndrome (obsolete MONDO:0020309)","termid":"MONDO:0020309","xrefs":{"Monarch":{"xref_id":"0020309"}}}


id: PBO:0091072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex E3 subunit Hrd1","termid":"PBO:0091072"}


id: GO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","termid":"GO:0090616"}


id: MONDO:0100003
data:
  {"annotated_genes":["SJAG_00969"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87636],"is_not":false,"summary":null,"term":"MONDO:0100003"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing renin-angiotensin-aldosterone system-blocker-induced angioedema.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00969":null},"genotype_count":0,"is_obsolete":false,"name":"susceptibility to angioedema induced by ACE inhibitors","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3806711","OMIM:300909","MEDGEN:813041"],"synonyms":[{"name":"angioedema induced by ACE inhibitors, susceptibility to","type":"exact"}],"termid":"MONDO:0100003","terms_by_termid":{"MONDO:0100003":null},"xrefs":{"Monarch":{"xref_id":"0100003"}}}


id: PBO:0058602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6734","termid":"PBO:0058602"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76827],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0140101","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380224","RHEA:20301","Reactome:R-HSA-379993","MetaCyc:ARGININE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: MONDO:0011038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar ataxia - areflexia - pes cavus - optic atrophy - sensorineural hearing loss (CAPOS syndrome) is a rare autosomal dominant neurological disorder characterized by early onset cerebellar ataxia, associated with areflexia, progressive optic atrophy, sensorineural deafness, a pes cavus deformity, and abnormal eye movements.","definition_xrefs":["Orphanet:1171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"},{"relation_name":"is_a","term_name":"ATP1A3-associated neurological disorder","termid":"MONDO:0700002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005328","MONDO:0002039"],"is_obsolete":false,"name":"cerebellar ataxia-areflexia-pes cavus-optic atrophy-sensorineural hearing loss syndrome","secondary_identifiers":["GARD:1188","MESH:C535351","NANDO:1200526","OMIM:601338","SCTID:720634003","MEDGEN:318633","UMLS:C1832466"],"synonyms":[{"name":"CAPOS","type":"related"},{"name":"CAPOS syndrome","type":"exact"},{"name":"cerebellar ataxia - areflexia - pes cavus - optic atrophy - sensorineural hearing loss","type":"related"},{"name":"cerebellar ataxia, areflexia, pes cavus, optic atrophy and sensorinural hearing loss","type":"related"},{"name":"cerebellar ataxia, areflexia, pes cavus, optic atrophy, and sensorineural hearing loss","type":"related"}],"termid":"MONDO:0011038","xrefs":{"Monarch":{"xref_id":"0011038"}}}


id: PBO:0088862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA N-glycosylase activity","termid":"PBO:0088862"}


id: PBO:0060658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 2","termid":"PBO:0060658"}


id: PR:U3H0P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:U3H0P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.06c","synonyms":[{"name":"Spom972h-wtf25","type":"exact"}],"termid":"PR:U3H0P2"}


id: PBO:0049976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIGD2A pseudogene 1","termid":"PBO:0049976"}


id: GO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"negative chemotaxis","termid":"GO:0050919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of negative chemotaxis","termid":"GO:0050923"}


id: _global:results_in_formation_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a entity and its participation in a process whereby at the beginning of the process the entity does not exist and at the end of the process the entity exists.","definition_xrefs":["GOC:mtg_berkeley_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has_output","termid":"RO:0002234"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_output","termid":"_global:has_output"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_formation_of","secondary_identifiers":["RO:0002297","GOREL:0001020"],"termid":"_global:results_in_formation_of"}


id: MOD:01428
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (13)C labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(13)C isotope tagged reagent","termid":"MOD:01428"}


id: MONDO:0013126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartter syndrome, type 4B (obsolete MONDO:0013126)","termid":"MONDO:0013126","xrefs":{"Monarch":{"xref_id":"0013126"}}}


id: MONDO:0008016
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86039,86040],"is_not":false,"summary":null,"term":"MONDO:0008016"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"trismus-pseudocamptodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111603","OMIM:158300","MEDGEN:78540","MESH:C535857","Orphanet:3377","SCTID:8757006","UMLS:C0265226","GARD:2621","ICD9:759.89"],"synonyms":[{"name":"DA7","type":"related"},{"name":"Dutch-Kentucky syndrome","type":"exact"},{"name":"Hecht syndrome","type":"exact"},{"name":"Hecht-Beals syndrome","type":"exact"},{"name":"arthrogryposis distal type 7","type":"related"},{"name":"arthrogryposis, distal, type 7","type":"related"},{"name":"distal arthrogryposis type 7","type":"exact"},{"name":"mouth, inability to open completely, and short finger-flexor tendons","type":"related"},{"name":"trismus-pseudocamptodactyly syndrome","type":"exact"}],"termid":"MONDO:0008016","terms_by_termid":{"MONDO:0008016":null},"xrefs":{"Monarch":{"xref_id":"0008016"}}}


id: PBO:0015653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-level_fluctuates_during","termid":"PBO:0015653"}


id: PBO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase","termid":"PBO:0001482"}


id: MONDO:0014580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the DPP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant primary microcephaly","termid":"MONDO:0007988"},{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 33","secondary_identifiers":["OMIM:616311","UMLS:C4225375","GARD:16082","DOID:0070063","MEDGEN:899389"],"synonyms":[{"name":"DPP6 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD33","type":"exact"},{"name":"autosomal dominant intellectual disability 33","type":"exact"},{"name":"autosomal dominant mental retardation 33","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 33","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in DPP6","type":"exact"},{"name":"intellectual disability, autosomal dominant 33","type":"exact"},{"name":"intellectual disability, autosomal dominant type 33","type":"exact"},{"name":"mental retardation, autosomal dominant 33","type":"related"},{"name":"mental retardation, autosomal dominant type 33","type":"exact"}],"termid":"MONDO:0014580","xrefs":{"Monarch":{"xref_id":"0014580"}}}


id: GO:0015473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A porin that acts in the assembly of fimbria together with fimbrial chaperone.","definition_xrefs":["TC:1.B.11.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fimbrial usher porin activity","termid":"GO:0015473"}


id: PBO:0082858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); hydrophilic homodimeric protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Golgi transport vesicles","termid":"PBO:0082858"}


id: PBO:0063611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 2","termid":"PBO:0063611"}


id: PATO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a teardrop.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulbous","synonyms":[{"name":" bulblike","type":"exact"},{"name":"bulb-shaped","type":"exact"},{"name":"swollen","type":"related"}],"termid":"PATO:0002210"}


id: PBO:0077051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB antisense RNA 2","termid":"PBO:0077051"}


id: PBO:0065151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 3","termid":"PBO:0065151"}


id: PBO:0042143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3 pseudogene 1","termid":"PBO:0042143"}


id: PBO:0026815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_binding_specificity","termid":"PBO:0026815"}


id: FYPO:0002035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase type I activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA topoisomerase type I activity","termid":"FYPO:0002034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA topoisomerase type I activity","synonyms":[{"name":"reduced DNA topoisomerase type I activity","type":"exact"}],"termid":"FYPO:0002035"}


id: GO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"negatively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of receptor recycling","synonyms":[{"name":"down regulation of receptor recycling","type":"exact"},{"name":"down-regulation of receptor recycling","type":"exact"},{"name":"downregulation of receptor recycling","type":"exact"},{"name":"inhibition of receptor recycling","type":"narrow"}],"termid":"GO:0001920"}


id: MONDO:0004775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iridocyclitis","termid":"MONDO:0004773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lens-induced iridocyclitis","secondary_identifiers":["ICD9:364.23","DOID:9388","MEDGEN:573082","SCTID:70461003","UMLS:C0339320"],"synonyms":[{"name":"lens-induced iridocyclitis","type":"exact"}],"termid":"MONDO:0004775","xrefs":{"Monarch":{"xref_id":"0004775"}}}


id: MONDO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media with thin, watery and sterile effusion.","definition_xrefs":["DOID:11557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute serous otitis media","secondary_identifiers":["ICD9:381.01","MEDGEN:509955","SCTID:194240006","UMLS:C0155415","ICD10CM:H65.0"],"synonyms":[{"name":"acute non-suppurative otitis media - serous","type":"exact"}],"termid":"MONDO:0001312","xrefs":{"Monarch":{"xref_id":"0001312"}}}


id: MONDO:0011384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 1","secondary_identifiers":["UMLS:C1858967","OMIM:603918","MEDGEN:395143"],"synonyms":[{"name":"Hyt1","type":"related"},{"name":"hypertension, essential, susceptibility to, 1","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011384","xrefs":{"Monarch":{"xref_id":"0011384"}}}


id: PBO:0109513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UCA1 antisense RNA 1","termid":"PBO:0109513"}


id: GO:0035888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + H2O + isoguanine = NH4+ + xanthine.","definition_xrefs":["RHEA:47720","PMID:21604715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"isoguanine deaminase activity","secondary_identifiers":["MetaCyc:RXN0-6708"],"synonyms":[{"name":"2-hydroxyadenine deaminase activity","type":"exact"},{"name":"2-oxoadenine deaminase activity","type":"exact"}],"termid":"GO:0035888"}


id: PBO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 1","termid":"PBO:0061567"}


id: PATO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001102 absolute stiffness value (obsolete PATO:0001102)","termid":"PATO:0001102"}


id: PBO:0038479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 4","termid":"PBO:0038479"}


id: MONDO:0011952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 7","secondary_identifiers":["OMIM:608031","UMLS:C1842674","MEDGEN:334136","DOID:0060199","GARD:10500","MESH:C564300"],"synonyms":[{"name":"ALS7","type":"exact"},{"name":"amyotrophic lateral sclerosis 7","type":"exact"}],"termid":"MONDO:0011952","xrefs":{"Monarch":{"xref_id":"0011952"}}}


id: PBO:0067894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 196","termid":"PBO:0067894"}


id: PBO:0053682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 869","termid":"PBO:0053682"}


id: MONDO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the gallbladder. Representative examples include Kaposi sarcoma, leiomyosarcoma, and rhabdomyosarcoma.","definition_xrefs":["NCIT:C5736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder sarcoma","secondary_identifiers":["UMLS:C1333757","DOID:4058","MEDGEN:232227"],"synonyms":[{"name":"gall bladder sarcoma","type":"exact"},{"name":"gallbladder sarcoma","type":"exact"},{"name":"malignant mesenchymal tumor of gallbladder","type":"exact"},{"name":"malignant mesenchymal tumour of gallbladder","type":"exact"},{"name":"sarcoma of gall bladder","type":"exact"},{"name":"sarcoma of gallbladder","type":"exact"},{"name":"sarcoma of the gallbladder","type":"exact"}],"termid":"MONDO:0002857","xrefs":{"Monarch":{"xref_id":"0002857"}}}


id: GO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of hairs in the imaginal disc-derived wing along a proximal-distal axis, such that each cell of the wing produces one wing hair which points in a distal direction.","definition_xrefs":["PMID:11239465","GOC:dph","GOC:ascb_2009","GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of imaginal disc-derived wing hair orientation","synonyms":[{"name":"establishment of wing hair orientation","type":"exact"}],"termid":"GO:0001737"}


id: PBO:0091787
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Premature Initiation of Mitosis","termid":"PBO:0091787"}


id: FYECO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a microtubule depolymerizing drug was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ microtubule depolymerizing drugs","synonyms":[{"name":"+ MBC","type":"narrow"}],"termid":"FYECO:0000235"}


id: PR:Q9Y7N5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7N5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.08c","synonyms":[{"name":"Spom972h-wtf16","type":"exact"}],"termid":"PR:Q9Y7N5"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: GO:0002949
data:
  {"annotated_genes":["SJAG_04182","SJAG_04201","SJAG_02863","SJAG_06560","SJAG_00865","SJAG_04700","SJAG_00378"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58915,79135,98638,99817,101499],"is_not":false,"summary":null,"term":"GO:0002949"},{"annotations":[75895,119012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["PMID:21183954","GOC:imk","GOC:mah","PMID:23258706","PMID:19287007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_00865":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070526"],"synonyms":[{"name":"t6A biosynthesis","type":"exact"},{"name":"t6A biosynthetic process","type":"exact"},{"name":"t6A tRNA modification","type":"exact"},{"name":"threonylcarbamoyladenosine anabolism","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthesis","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthetic process","type":"exact"},{"name":"threonylcarbamoyladenosine formation","type":"exact"},{"name":"threonylcarbamoyladenosine synthesis","type":"exact"}],"termid":"GO:0002949","terms_by_termid":{"GO:0002949":null,"GO:0072670":null}}


id: MONDO:0006285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the major salivary glands. It usually originates in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C5975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"},{"relation_name":"is_a","term_name":"salivary gland carcinoma ex pleomorphic adenoma","termid":"MONDO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"major salivary gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["MEDGEN:233655","UMLS:C1334550","EFO:1000345"],"synonyms":[{"name":"carcinoma ex pleomorphic adenoma of Major salivary gland","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma of the Major salivary gland","type":"exact"},{"name":"major salivary gland carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"major salivary gland salivary gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006285","xrefs":{"Monarch":{"xref_id":"0006285"}}}


id: GO:2000572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-4-dependent isotype switching to IgE isotypes.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching to IgE isotypes","termid":"GO:0048295"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-dependent isotype switching to IgE isotypes","termid":"GO:2000571"},{"relation_name":"positively_regulates","term_name":"interleukin-4-dependent isotype switching to IgE isotypes","termid":"GO:0035708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4-dependent isotype switching to IgE isotypes","synonyms":[{"name":"positive regulation of IL-4-dependent isotype switching to IgE isotypes","type":"exact"}],"termid":"GO:2000572"}


id: GO:0036080
data:
  {"annotated_genes":["SJAG_00339","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[72183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleotide-sugar from one side of a membrane to the other. Purine nucleotide-sugars are purine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["PMID:19948734","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar transmembrane transporter activity","termid":"GO:0005338"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"purine nucleotide-sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0036080","terms_by_termid":{"GO:0005457":null,"GO:0005458":null}}


id: MONDO:0001967
data:
  {"annotated_genes":["SJAG_03077","SJAG_04148","SJAG_04950","SJAG_03051"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","definition":"A congenital disorder characterized by the presence of extremely hypoplastic gonads preventing the development of secondary sex characteristics.","definition_xrefs":["NCIT:C61420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03051":null,"SJAG_03077":null,"SJAG_04148":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006059","GARD:2538","ICD9:758.6","MEDGEN:9075","SCTID:205681004","UMLS:C0018051","DOID:14447"],"synonyms":[{"name":"gonadal dysgenesis syndrome","type":"exact"}],"termid":"MONDO:0001967","terms_by_termid":{"MONDO:0013689":null,"MONDO:0030736":null,"MONDO:0054850":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0001967"}}}


id: GO:0141178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids the effects of recognition by host  complement by altering molecules on the symbiont surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22825444","PMID:25537831","PMID:34887398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host complement","synonyms":[{"name":"symbiont-mediated evasion of host complement","type":"exact"}],"termid":"GO:0141178"}


id: MONDO:0032888
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87171],"is_not":false,"summary":null,"term":"MONDO:0032888"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with brain anomalies and with or without vertebral or cardiac anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684772","OMIM:618731","UMLS:C5231481"],"synonyms":[{"name":"NEDBAVC","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH BRAIN ANOMALIES AND WITH OR WITHOUT VERTEBRAL OR CARDIAC ANOMALIES","type":"related"}],"termid":"MONDO:0032888","terms_by_termid":{"MONDO:0032888":null},"xrefs":{"Monarch":{"xref_id":"0032888"}}}


id: MONDO:0002728
data:
  {"annotated_genes":["SJAG_04213","SJAG_05313","SJAG_04755","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85549,85550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87685,87686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"An aggressive malignant embryonal neoplasm usually occurring during childhood. It is characterized by the presence of large cells with abundant cytoplasm, large eccentric nucleus, and a prominent nucleolus and it is associated with abnormalities of chromosome 22. It can arise from the central nervous system, kidney, and the soft tissues. The prognosis is poor.","definition_xrefs":["NCIT:C3808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200057","MESH:D018335","ONCOTREE:MRT","DOID:3672","GARD:7572","ICDO:8963/3","Orphanet:69077","UMLS:C0206743","EFO:0005701","MEDGEN:64646"],"synonyms":[{"name":"malignant rhabdoid tumor","type":"exact"},{"name":"malignant rhabdoid tumour","type":"exact"},{"name":"rhabdoid cancer","type":"related"},{"name":"rhabdoid sarcoma","type":"exact"},{"name":"rhabdoid tumor","type":"exact"}],"termid":"MONDO:0002728","terms_by_termid":{"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0002728"}}}


id: PBO:0040719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 like","termid":"PBO:0040719"}


id: FYPO:0000944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a normal morphology (i.e. size, shape, or structure). An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spore morphology","termid":"FYPO:0000943"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"inviable spore with normal morphology","synonyms":[{"name":"lethal; spore with normal morphology","type":"exact"},{"name":"spore germination abolished, normal spore morphology","type":"related"}],"termid":"FYPO:0000944"}


id: PBO:0049486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 2","termid":"PBO:0049486"}


id: MONDO:0010081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic stenosis, membranous","secondary_identifiers":["MESH:C564793","OMIM:271950","UMLS:C1848979","GARD:18242","MEDGEN:336468"],"synonyms":[{"name":"subaortic stenosis, membranous","type":"exact"}],"termid":"MONDO:0010081","xrefs":{"Monarch":{"xref_id":"0010081"}}}


id: PBO:0052889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-12, pseudogene","termid":"PBO:0052889"}


id: PBO:0051167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-50 (pseudogene)","termid":"PBO:0051167"}


id: GO:0060277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stop, prevents or decreases transcription as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0060277)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter during G1 phase of mitotic cell cycle","type":"related"},{"name":"negative regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0060277"}


id: PBO:0067815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 117","termid":"PBO:0067815"}


id: GO:0098869
data:
  {"annotated_genes":["SJAG_04632","SJAG_05181","SJAG_04399","SJAG_04823","SJAG_00141","SJAG_02515","SJAG_01199","SJAG_01734","SJAG_03303","SJAG_01216","SJAG_00489","SJAG_04788","SJAG_04403","SJAG_01162","SJAG_00668","SJAG_02630","SJAG_04125","SJAG_03166","SJAG_03623","SJAG_04953","SJAG_03653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57614,63762,65648,68532,69112,107171],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[118684,95559,105417,109216,100363,117761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[89337,89759,65337,61055,69281,74688,58106,99632,93497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular oxidant detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098869","terms_by_termid":{"GO:0019430":null,"GO:0061692":null,"GO:0098869":null}}


id: MONDO:0040870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of polydipsia characterized by excessive fluid intake in the absence of physiological stimuli to drink.","definition_xrefs":["Wikipedia:Primary_polydipsia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary polydipsia","termid":"MONDO:0040870","xrefs":{"Monarch":{"xref_id":"0040870"}}}


id: GO:1902429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of water channel activity.","definition_xrefs":["PMID:22095752","GOC:TermGenie","GOC:nhn"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of water channel activity (obsolete GO:1902429)","synonyms":[{"name":"activation of aquaporin","type":"narrow"},{"name":"activation of water channel activity","type":"narrow"},{"name":"aquaporin activation","type":"narrow"},{"name":"positive regulation of aquaporin","type":"narrow"},{"name":"up regulation of aquaporin","type":"narrow"},{"name":"up regulation of water channel activity","type":"exact"},{"name":"up-regulation of aquaporin","type":"narrow"},{"name":"up-regulation of water channel activity","type":"exact"},{"name":"upregulation of aquaporin","type":"narrow"},{"name":"upregulation of water channel activity","type":"exact"}],"termid":"GO:1902429"}


id: MONDO:0014493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatic mutation in the CTLA4 gene resulting in only a single functional gene. Haploinsufficiency for CTLA4 is associated with autoimmune lymphoproliferative syndrome, type V.","definition_xrefs":["NCIT:C126341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency","secondary_identifiers":["UMLS:C4015214","Orphanet:436159","OMIM:616100","GARD:12316","MEDGEN:863651"],"synonyms":[{"name":"ALPS due to CTLA4 haploinsufficiency","type":"exact"},{"name":"ALPS type 5","type":"exact"},{"name":"ALPS type V","type":"exact"},{"name":"ALPS5","type":"related"},{"name":"CHAI","type":"exact"},{"name":"CTLA-4 haploinsufficiency with autoimmune infiltration disease","type":"exact"},{"name":"CTLA4 haploinsufficiency","type":"exact"},{"name":"CTLA4 haploinsufficiency with autoimmune infiltration","type":"related"},{"name":"autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type 5","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type V","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 5","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type V","type":"related"},{"name":"chai","type":"exact"},{"name":"immune dysregulation with autoimmunity, immunodeficiency, and lymphoproliferation","type":"exact"}],"termid":"MONDO:0014493","xrefs":{"Monarch":{"xref_id":"0014493"}}}


id: MONDO:0018801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital bilateral absence of the vas deferens (CBAVD) is a condition leading to male infertility.","definition_xrefs":["Orphanet:48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bilateral absence of vas deferens","secondary_identifiers":["MEDGEN:400764","OMIMPS:277180","SCTID:275416002","GARD:5461","DOID:0111862","MedDRA:10010670","UMLS:C1865433","ICD9:752.89"],"synonyms":[{"name":"congenital bilateral agenesis of vas deferens","type":"exact"},{"name":"congenital bilateral aplasia of vas deferens","type":"exact"}],"termid":"MONDO:0018801","xrefs":{"Monarch":{"xref_id":"0018801"}}}


id: MONDO:1012765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the CNGA1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, CNGA1-related, dog","secondary_identifiers":["OMIA:001977-9615"],"termid":"MONDO:1012765","xrefs":{"Monarch":{"xref_id":"1012765"}}}


id: GO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-3 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-3 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-3_receptor"],"synonyms":[{"name":"IL-3 receptor activity","type":"exact"},{"name":"IL-3R","type":"exact"}],"termid":"GO:0004912"}


id: PBO:0052500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 12","termid":"PBO:0052500"}


id: PBO:0069756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1039, pseudogene","termid":"PBO:0069756"}


id: GO:0097651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phosphatidylinositol 3-kinase complex that contains a catalytic and a regulatory subunit of a phosphatidylinositol 3-kinase (PI3K) enzyme, plus one or more adaptor proteins. Class I PI3Ks phosphorylate phosphatidylinositol [PI], phosphatidylinositol-4-phosphate [PI(4)P] and phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2], and are divided into subclasses A and B according to the type of adaptor subunit with which they associate. The class I PI3K subfamily of genes comprises members in vertebrates, worm and fly, but none in yeast.","definition_xrefs":["PMID:24587488","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex","termid":"GO:0005942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class I","synonyms":[{"name":"class I PI3K complex","type":"exact"},{"name":"class I phosphatidylinositol 3-kinase complex","type":"exact"}],"termid":"GO:0097651"}


id: MONDO:0007861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated cloverleaf skull syndrome is a form of craniosynostosis involving multiple sutures (coronal, lambdoidal, sagittal and metopic) characterized by a trilobular skull of varying severity (frontal towering and bossing, temporal bulging and a flat posterior skull), dysmorphic features (downslanting palpebral fissures, midface hypoplasia, and extreme proptosis) and that is complicated by hydrocephalus, cerebral venous hypertension, developmental delay/intellectual disability and hind brain herniation.","definition_xrefs":["Orphanet:2343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated craniosynostosis","termid":"MONDO:0015337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated cloverleaf skull syndrome","secondary_identifiers":["GARD:3115","MESH:C536884","OMIM:148800","MEDGEN:98141","SCTID:254022009","UMLS:C0432126"],"synonyms":[{"name":"KLEEBLATTSCHAEDEL","type":"related"},{"name":"Kleeblattschadel","type":"related"},{"name":"Kleeblattschaedel deformity syndrome","type":"related"},{"name":"Kleeblattschaedel syndrome","type":"related"},{"name":"Kleeblattschaedel-deformity syndrome","type":"related"},{"name":"cloverleaf skull","type":"related"},{"name":"cloverleaf skull syndrome","type":"related"},{"name":"isolated cloverleaf skull syndrome","type":"exact"}],"termid":"MONDO:0007861","xrefs":{"Monarch":{"xref_id":"0007861"}}}


id: PBO:0051864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly enzyme pseudogene 1","termid":"PBO:0051864"}


id: PBO:0077905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosylprotein sulfotransferase 1","termid":"PBO:0077905"}


id: GO:1903779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rph","GO_REF:0000058","GOC:TermGenie","GOC:BHF","PMID:12967627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac conduction","secondary_identifiers":["Reactome:R-HSA-5578768","Reactome:R-HSA-5578775"],"termid":"GO:1903779"}


id: MONDO:0015132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency predominantly affecting antibody production (obsolete MONDO:0015132)","secondary_identifiers":["icd11.foundation:85074116","Orphanet:101977"],"termid":"MONDO:0015132","xrefs":{"Monarch":{"xref_id":"0015132"}}}


id: GO:0072176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephric duct over time, from its initial formation to a mature structure. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct development","termid":"GO:0072176"}


id: GO:0008554
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73811],"is_not":false,"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out); by a phosphorylative mechanism.","definition_xrefs":["PMID:9224683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:7.2.2.3"],"synonyms":[{"name":"Na(+)-exporting ATPase activity","type":"broad"},{"name":"Na(+)-transporting ATPase activity","type":"broad"},{"name":"Na+-exporting ATPase activity","type":"broad"},{"name":"Na+-transporting ATPase activity","type":"broad"},{"name":"sodium exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transport ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008554","terms_by_termid":{"GO:0008554":null}}


id: FYPO:0005049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at RNA polymerase II promoters is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","termid":"FYPO:0005051"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II promoter during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II promoter during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA pol II promoter during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II promoter during nitrogen deprivation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II promoter nitrogen starvation","type":"exact"}],"termid":"FYPO:0005049"}


id: PBO:0055760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA activated by TGF-beta","termid":"PBO:0055760"}


id: PBO:0081315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 99","termid":"PBO:0081315"}


id: PATO:0001682
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to exert an attractive or repulsive force on other entities.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Magnetism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnetism","termid":"PATO:0001682"}


id: GO:0008655
data:
  {"annotated_genes":["SJAG_04709","SJAG_00533","SJAG_03362","SJAG_04067","SJAG_03708","SJAG_04264","SJAG_00957","SJAG_04354","SJAG_01970","SJAG_04712","SJAG_05029","SJAG_04713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91011],"is_not":false,"summary":null,"term":"GO:0008655"},{"annotations":[93330,68266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88807],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903931"},{"annotations":[98096,114203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[99887,110833,110832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[87815,88803,92329,68265,93331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[92330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates a pyrimidine-containing compound, a nucleobase, nucleoside, nucleotide or nucleic acid that contains a pyrimidine base, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00957":null,"SJAG_01970":null,"SJAG_03362":null,"SJAG_03708":null,"SJAG_04067":null,"SJAG_04264":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04712":null,"SJAG_04713":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine salvage","type":"related"}],"termid":"GO:0008655","terms_by_termid":{"GO:0006223":null,"GO:0008655":null,"GO:0036172":null,"GO:0043097":null,"GO:0044206":null,"GO:0044211":null,"GO:1903931":null}}


id: MONDO:1011848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, non-human animal","secondary_identifiers":["OMIA:000662"],"termid":"MONDO:1011848","xrefs":{"Monarch":{"xref_id":"1011848"}}}


id: PBO:0055880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 4C","termid":"PBO:0055880"}


id: PBO:0055517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2951","termid":"PBO:0055517"}


id: MONDO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vestibulocochlear nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"retrocochlear disease","termid":"MONDO:0002453"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibulocochlear nerve disorder","secondary_identifiers":["UMLS:C0001163","MEDGEN:1724","MESH:D000160","NCIT:C27207","ICD9:388.5","SCTID:77949003","DOID:12657"],"synonyms":[{"name":"acoustic nerve disease","type":"exact"},{"name":"acoustic nerve disorder","type":"exact"},{"name":"acoustic nerve disorder NOS","type":"exact"},{"name":"disease of vestibulocochlear nerve","type":"exact"},{"name":"disease or disorder of vestibulocochlear nerve","type":"exact"},{"name":"disorder of acoustic nerve","type":"exact"},{"name":"disorder of acoustovestibular nerve","type":"related"},{"name":"disorder of eighth nerve","type":"related"},{"name":"disorder of the vestibulocochlear nerve","type":"related"},{"name":"disorder of vestibulocochlear nerve","type":"exact"},{"name":"vestibulocochlear nerve disease","type":"exact"},{"name":"vestibulocochlear nerve disease or disorder","type":"exact"},{"name":"vestibulocochlear nerve disorder","type":"exact"}],"termid":"MONDO:0001563","xrefs":{"Monarch":{"xref_id":"0001563"}}}


id: PR:Q92344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.06","synonyms":[{"name":"Spom972h-fta5","type":"exact"},{"name":"sim4 complex subunit fta5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92344"}


id: MOD:01122
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dCytidinyl","termid":"MOD:01122"}


id: GO:1990901
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell pole distal from the most recent cell division.","definition_xrefs":["GOC:jh2","PMID:10231492","PMID:8226658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"old cell pole","termid":"GO:1990901"}


id: GO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branches of the fetal placental villi are generated and organized. The villous part of the placenta is called the labyrinth layer.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in labyrinthine layer morphogenesis","termid":"GO:0060670"}


id: PBO:0091685
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated non-conserved ORF in low complexity region","termid":"PBO:0091685"}


id: MONDO:0003253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign granular cell tumor that arises from the vulva.","definition_xrefs":["NCIT:C40328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar granular cell tumor","secondary_identifiers":["DOID:5043","UMLS:C1520083","MEDGEN:276992"],"synonyms":[{"name":"granular cell tumor of mammalian vulva","type":"exact"},{"name":"granular cell tumour of mammalian vulva","type":"exact"},{"name":"mammalian vulva granular cell tumor","type":"exact"},{"name":"mammalian vulva granular cell tumour","type":"exact"},{"name":"vulvar granular cell tumor","type":"exact"}],"termid":"MONDO:0003253","xrefs":{"Monarch":{"xref_id":"0003253"}}}


id: PR:O74925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protein pep3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.02","secondary_identifiers":["UniProtKB:O74925"],"synonyms":[{"name":"Spom972h-VPS18","type":"exact"},{"name":"vacuolar protein sorting-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74925"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"}],"termid":"GO:0120332"}


id: PBO:0086225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that functions in mitochondrial copper homeostasis; mitochondrial intermembrane space protein; essential for functional cytochrome oxidase expression; homologous to Cox17p; contains twin cysteine-x9-cysteine motifs","termid":"PBO:0086225"}


id: PBO:0112975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, Alg7","termid":"PBO:0112975"}


id: PBO:0031585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_G418","termid":"PBO:0031585"}


id: PBO:0083600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; identified by fungal homology and RT-PCR","termid":"PBO:0083600"}


id: FYPO:0004861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal galactomannan level","termid":"FYPO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell wall galactomannan level","synonyms":[{"name":"normal cell wall galactomannan accumulation","type":"related"},{"name":"normal cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004861"}


id: FYPO:0004994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of meiosis I","synonyms":[{"name":"delayed meiosis I","type":"exact"},{"name":"delayed onset of first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004994"}


id: GO:0098912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which atrial cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane depolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial cardiac muscle cell depolarization","type":"broad"},{"name":"atrial depolarization","type":"related"},{"name":"electrocardiogram PR interval","type":"related"}],"termid":"GO:0098912"}


id: MONDO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pupil disorder","termid":"MONDO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"abnormal pupillary function","secondary_identifiers":["HP:0007686","DOID:11518","ICD9:379.40","UMLS:C0917967","ICD9:379.49","MEDGEN:214629","SCTID:72124005"],"synonyms":[{"name":"abnormal pupillary function","type":"exact"},{"name":"abnormal pupillary function (disease)","type":"exact"}],"termid":"MONDO:0001303","xrefs":{"Monarch":{"xref_id":"0001303"}}}


id: GO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"}


id: PBO:0004121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase involved in translation Mtg1 (predicted)","termid":"PBO:0004121"}


id: GO:0070087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chromo shadow domain, a protein domain that is distantly related, and found in association with, the chromo domain.","definition_xrefs":["InterPro:IPR008251","GOC:vk","GOC:BHF","PMID:7667093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chromo shadow domain binding","synonyms":[{"name":"chromoshadow domain binding","type":"exact"}],"termid":"GO:0070087"}


id: PBO:0046076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 1","termid":"PBO:0046076"}


id: PBO:0041730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II inhibitor 1","termid":"PBO:0041730"}


id: PBO:0027404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0027404"}


id: PBO:0089581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5","termid":"PBO:0089581"}


id: GO:0097654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that is capable of fusing intracellular vesicles to the plasma membrane of platelets for exocytosis of alpha-granules or dense granules. Contains isoforms of VAMP, SNAP and syntaxin proteins. Ternary SNARE complexes interact in a circular array to form ring complexes or channels around the membrane fusion. A common composition in human is VAMP-8, SNAP-23 and syntaxin-2 or -4.","definition_xrefs":["PMID:19450911","PMID:12130530","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet SNARE complex","termid":"GO:0097654"}


id: PR:Q10244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.14","secondary_identifiers":["UniProtKB:Q10244"],"synonyms":[{"name":"Spom972h-PXMP2","type":"exact"}],"termid":"PR:Q10244"}


id: GO:0050630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-isoeugenol + S-adenosyl-L-methionine = (E)-isomethyleugenol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:17081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(iso)eugenol O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.146","MetaCyc:2.1.1.146-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:isoeugenol O-methyltransferase activity","type":"related"},{"name":"isoeugenol O-methyltransferase activity","type":"exact"}],"termid":"GO:0050630"}


id: PBO:0003239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Gtp1 (predicted)","termid":"PBO:0003239"}


id: GO:0035744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a T-helper 1 cell.","definition_xrefs":["GOC:BHF","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell cytokine production","termid":"GO:0035743"},{"relation_name":"part_of","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"T-helper 1 cell cytokine production","synonyms":[{"name":"Th1 cell cytokine production","type":"exact"}],"termid":"GO:0035744"}


id: SO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA_gene","termid":"SO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA_gene","synonyms":[{"name":"mitochondrial large subunit rRNA gene","type":"exact"},{"name":"rRNA 21S gene","type":"exact"},{"name":"rRNA_21S_gene","type":"exact"}],"termid":"SO:0002364"}


id: PBO:0073208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3G","termid":"PBO:0073208"}


id: PBO:0045498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 2","termid":"PBO:0045498"}


id: GO:0035936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of testosterone into the circulatory system. Testosterone is an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4-C-5.","definition_xrefs":["GOC:sl","PMID:12606499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"testosterone secretion","termid":"GO:0035936"}


id: PBO:0044248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and zona pellucida like domains 1","termid":"PBO:0044248"}


id: GO:0019115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzaldehyde + NAD(P)+ + H2O = benzoate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzaldehyde dehydrogenase [NAD(P)+] activity (obsolete GO:0019115)","termid":"GO:0019115"}


id: MONDO:0010214
data:
  {"annotated_genes":["SJAG_04791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86986],"is_not":false,"summary":null,"term":"MONDO:0010214"}]},"cv_name":"mondo","definition":"Xeroderma pigmentosum variant is a milder subtype of xeroderma pigmentosum (XP), a rare genetic photodermatosis characterized by severe sun sensitivity and an increased risk of skin cancer.","definition_xrefs":["Orphanet:90342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"xeroderma pigmentosum variant type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536766","UMLS:C1848410","OMIM:278750","GARD:5630","DOID:0110847","NCIT:C141367","MEDGEN:376352"],"synonyms":[{"name":"XPV","type":"exact"},{"name":"photosensitivity with defective DNA synthesis","type":"exact"},{"name":"xeroderma pigmentosum variant","type":"related"},{"name":"xeroderma pigmentosum variant type","type":"exact"},{"name":"xeroderma pigmentosum with normal DNA repair rates","type":"exact"},{"name":"xeroderma pigmentosum, variant type","type":"related"}],"termid":"MONDO:0010214","terms_by_termid":{"MONDO:0010214":null},"xrefs":{"Monarch":{"xref_id":"0010214"}}}


id: MONDO:1010724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phenylketonuria that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria, non-human animal","termid":"MONDO:1010114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylketonuria, pig","secondary_identifiers":["OMIA:002293-9823"],"termid":"MONDO:1010724","xrefs":{"Monarch":{"xref_id":"1010724"}}}


id: PBO:0027183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027183"}


id: PBO:0091662
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 0.46","termid":"PBO:0091662"}


id: GO:0050160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + orsellinate depside = 2 o-orsellinate + H+.","definition_xrefs":["EC:3.1.1.40","RHEA:19549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"orsellinate-depside hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00054","MetaCyc:ORSELLINATE-DEPSIDE-HYDROLASE-RXN"],"synonyms":[{"name":"lecanorate hydrolase activity","type":"related"}],"termid":"GO:0050160"}


id: GO:0035770
data:
  {"annotated_genes":["SJAG_01026","SJAG_00474","SJAG_01650","SJAG_02263","SJAG_02213","SJAG_03283","SJAG_03696","SJAG_00759","SJAG_03214","SJAG_02638","SJAG_04407","SJAG_03424","SJAG_02573","SJAG_01479","SJAG_04640","SJAG_00391","SJAG_03277","SJAG_01222","SJAG_16457","SJAG_03276","SJAG_16454","SJAG_03954","SJAG_02239","SJAG_02164","SJAG_04480","SJAG_00507","SJAG_00544","SJAG_00285","SJAG_03498","SJAG_05010","SJAG_03023","SJAG_01436","SJAG_01317","SJAG_01512","SJAG_03157","SJAG_02469","SJAG_02419","SJAG_03113","SJAG_01159","SJAG_04772","SJAG_03460","SJAG_02628","SJAG_04672","SJAG_01625","SJAG_04427","SJAG_01548","SJAG_01897","SJAG_03762","SJAG_00686","SJAG_04350","SJAG_03132","SJAG_03070","SJAG_01053","SJAG_02540","SJAG_02663","SJAG_00423","SJAG_01822","SJAG_02808","SJAG_01954","SJAG_04744","SJAG_03876","SJAG_01910","SJAG_01761","SJAG_00966","SJAG_03597","SJAG_04880","SJAG_05694","SJAG_02995","SJAG_03901","SJAG_02592","SJAG_04342"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115506,96391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015030"},{"annotations":[74332,93371,75030,114006,92910,105946,95147,111457,94722,77016,91905,94914,79302,89839,105687,97461,90663,99283,96440,90545,90621,110262,87871,90255,117676,88706,100290,79741,106040,70947,90675,105578,106039,73367,72928,110364,113711,93370,90051,94913,89509,90712,98142,107313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[79322,78154,79888,71464,74671,76324,76974,77936,95950,70752,74144,70358,80032,70569,80394,72153,79307,75898,90053,80070,73158,110265,115536,74695,116996,113267,73518,76156,79120,90666,80029,77948,74995,77014,100292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.","definition_xrefs":["GOC:sp","PMID:16520386","GOC:go_curators","PMID:20368989","PMID:21436445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01761":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03901":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA granule","type":"narrow"},{"name":"RNP granule","type":"exact"},{"name":"mRNP granule","type":"exact"}],"termid":"GO:0035770","terms_by_termid":{"GO:0000932":null,"GO:0010494":null,"GO:0015030":null}}


id: GO:0061873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell contraction.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"hepatic stellate cell contraction","termid":"GO:0061872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell contraction","termid":"GO:0061873"}


id: PBO:0079784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A5","termid":"PBO:0079784"}


id: MONDO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placental site trophoblastic tumor (obsolete MONDO:0006911)","termid":"MONDO:0006911","xrefs":{"Monarch":{"xref_id":"0006911"}}}


id: GO:0042247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of a follicular epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity of follicular epithelium","termid":"GO:0042247"}


id: GO:0097338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a clozapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to clozapine","termid":"GO:0097338"}


id: GO:1900534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"palmitic acid metabolic process","termid":"GO:1900533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"palmitic acid catabolic process","termid":"GO:1900534"}


id: GO:0000272
data:
  {"annotated_genes":["SJAG_02076","SJAG_04327","SJAG_01171","SJAG_02649","SJAG_03444","SJAG_06309","SJAG_01561","SJAG_03646","SJAG_05001","SJAG_00115","SJAG_03824","SJAG_03851","SJAG_02131","SJAG_03295","SJAG_00667","SJAG_00620","SJAG_01017","SJAG_01783","SJAG_01888","SJAG_02478","SJAG_04963"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58752,67399,96467,96468,108775,116017],"is_not":false,"summary":null,"term":"GO:0000272"},{"annotations":[119884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[100512,94381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[70901,75401,77267,71045,73662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[103669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[80168,72692,73494,73828,79100,72234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["PMID:33139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_02131":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_03851":null,"SJAG_04327":null,"SJAG_04963":null,"SJAG_05001":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"polysaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:24699070":null},"secondary_identifiers":["GO:0044244"],"synonyms":[{"name":"multicellular organismal polysaccharide catabolic process","type":"narrow"},{"name":"polysaccharide breakdown","type":"exact"},{"name":"polysaccharide catabolism","type":"exact"},{"name":"polysaccharide degradation","type":"exact"}],"termid":"GO:0000272","terms_by_termid":{"GO:0000272":null,"GO:0005980":null,"GO:0009251":null,"GO:0030995":null,"GO:0044347":null,"GO:0061723":null}}


id: GO:0034071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + aminoglycoside = ADP + phosphoaminoglycoside.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside phosphotransferase activity","secondary_identifiers":["EC:2.7.1.190"],"synonyms":[{"name":"aminoglycoside kinase activity","type":"exact"}],"termid":"GO:0034071"}


id: PBO:0081117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 6","termid":"PBO:0081117"}


id: MONDO:0004791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lipid storage disease (obsolete MONDO:0004791)","termid":"MONDO:0004791","xrefs":{"Monarch":{"xref_id":"0004791"}}}


id: GO:0046093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxycytidine metabolic process","termid":"GO:0046092"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside biosynthetic process","termid":"GO:0046126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxycytidine biosynthetic process","synonyms":[{"name":"deoxycytidine anabolism","type":"exact"},{"name":"deoxycytidine biosynthesis","type":"exact"},{"name":"deoxycytidine formation","type":"exact"},{"name":"deoxycytidine synthesis","type":"exact"}],"termid":"GO:0046093"}


id: PBO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2A","termid":"PBO:0042568"}


id: GO:0045155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons from the CoQH2-cytochrome c reductase complex and the cytochrome c oxidase complex.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity (obsolete GO:0045155)","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome c","type":"narrow"}],"termid":"GO:0045155"}


id: MOD:00262
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a peptide bond between a C-terminal L-glutamic acid residue and a free L-tyrosine.","definition_xrefs":["RESID:AA0257","ChEBI:21477","PubMed:6387372","PubMed:8093886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-glutamyl)-L-tyrosine","synonyms":[{"name":"(S,S)-2-(2-aminopentanedio-1-yl)amino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"L-glutamyl L-tyrosine","type":"exact"},{"name":"N-(L-glutamyl)-L-tyrosine","type":"exact"},{"name":"SITE Involved in polymerization","type":"exact"}],"termid":"MOD:00262"}


id: MONDO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A suppurative otitis media which is an inflammatory disease of the middle ear cleft characterized by the presence of a persisting perforation within the pars tensa of the tympanic membrane, intermittent profuse muco-purulent otorrhea and gradually progressive conductive hearing loss of more than 12 weeks duration. It is caused by episodes of upper respiratory infections.","definition_xrefs":["DOID:14435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suppurative otitis media","termid":"MONDO:0005975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic tubotympanic suppurative otitis media","secondary_identifiers":["ICD9:382.1","MEDGEN:509966","UMLS:C0155440","ICD10CM:H66.1","SCTID:87665008","icd11.foundation:1770220148"],"termid":"MONDO:0001964","xrefs":{"Monarch":{"xref_id":"0001964"}}}


id: PBO:0081983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 9","termid":"PBO:0081983"}


id: PBO:0073355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family C member 1","termid":"PBO:0073355"}


id: FYPO:0006688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which transversion mutations occur at a higher frequency than normal.","definition_xrefs":["PMID:14599746","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mutator","termid":"FYPO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased transversion frequency","termid":"FYPO:0006688"}


id: PBO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0001320"}


id: SO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a transcript that has a translational frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"translationally_frameshifted","termid":"SO:0000887"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_transcript_with_translational_frameshift","synonyms":[{"name":"gene with transcript with translational frameshift","type":"exact"}],"termid":"SO:0000712"}


id: FYPO:0001529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GTP binding","termid":"FYPO:0001528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased GTP binding","synonyms":[{"name":"reduced GTP binding","type":"exact"}],"termid":"FYPO:0001529"}


id: GO:0051712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"positively_regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of killing of cells of another organism","secondary_identifiers":["GO:0052330","GO:0052388","GO:0052501","GO:0052518","GO:0052529"],"synonyms":[{"name":"activation by organism of apoptotic programmed cell death in other organism during symbiotic interaction","type":"related"},{"name":"activation of killing of cells of another organism","type":"narrow"},{"name":"enhancement of other organism programmed cell death by organism","type":"related"},{"name":"positive regulation of killing of cells of other organism","type":"exact"},{"name":"stimulation of killing of cells of another organism","type":"narrow"},{"name":"up regulation of killing of cells of another organism","type":"exact"},{"name":"up-regulation of killing of cells of another organism","type":"exact"},{"name":"upregulation of killing of cells of another organism","type":"exact"}],"termid":"GO:0051712"}


id: PBO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 divergent transcript","termid":"PBO:0044160"}


id: PBO:0027756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_calcium_ion","termid":"PBO:0027756"}


id: PBO:0050736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 22","termid":"PBO:0050736"}


id: MONDO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the testis and is not associated with lymphoma in another anatomic site.","definition_xrefs":["NCIT:C6810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular lymphoma","secondary_identifiers":["SCTID:277664004","DOID:12253","UMLS:C0349644","ICD9:186.9","MEDGEN:138110","ONCOTREE:TLYM"],"synonyms":[{"name":"TLYM","type":"related"},{"name":"lymphoma of testis","type":"exact"},{"name":"lymphoma of the testis","type":"exact"},{"name":"malignant lymphoma of testis","type":"exact"},{"name":"primary testicular lymphoma","type":"exact"},{"name":"testicular lymphoma","type":"exact"}],"termid":"MONDO:0001472","xrefs":{"Monarch":{"xref_id":"0001472"}}}


id: MONDO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cockayne syndrome A (obsolete MONDO:0008997)","termid":"MONDO:0008997","xrefs":{"Monarch":{"xref_id":"0008997"}}}


id: MONDO:0011332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dyserythropoiesis, congenital, with ultrastructurally normal erythroblast heterochromatin","secondary_identifiers":["UMLS:C3807235","MEDGEN:813565","OMIM:603529"],"synonyms":[{"name":"Dyserythropoiesis, congenital, with ultrastructurally normal erythroblast heterochromatin","type":"exact"}],"termid":"MONDO:0011332","xrefs":{"Monarch":{"xref_id":"0011332"}}}


id: PBO:0034583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex,_with_protein_mislocalized_to_vacuole,_during_vegetative_growth","termid":"PBO:0034583"}


id: GO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"negatively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorylation","synonyms":[{"name":"down regulation of phosphorylation","type":"exact"},{"name":"down-regulation of phosphorylation","type":"exact"},{"name":"downregulation of phosphorylation","type":"exact"},{"name":"inhibition of phosphorylation","type":"narrow"}],"termid":"GO:0042326"}


id: MONDO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the testis. The majority of cases arise from teratomas or spermatocytic seminomas.","definition_xrefs":["NCIT:C6359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis sarcoma","secondary_identifiers":["MEDGEN:234943","DOID:4062","UMLS:C1336727"],"synonyms":[{"name":"sarcoma of testis","type":"exact"},{"name":"sarcoma of the testis","type":"exact"},{"name":"testicular sarcoma","type":"exact"},{"name":"testis sarcoma","type":"exact"}],"termid":"MONDO:0002861","xrefs":{"Monarch":{"xref_id":"0002861"}}}


id: PR:O94705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox9 gene.","definition_xrefs":["UniProtKB:O94705","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.05c","synonyms":[{"name":"Spom972h-cox9","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94705"}


id: PBO:0054517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1917","termid":"PBO:0054517"}


id: PBO:0069108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 356, pseudogene","termid":"PBO:0069108"}


id: PBO:0028423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_meiosis","termid":"PBO:0028423"}


id: GO:0004644
data:
  {"annotated_genes":["SJAG_01814"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72128],"is_not":false,"summary":null,"term":"GO:0004644"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + N1-(5-phospho-D-ribosyl)glycinamide = tetrahydrofolate + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide.","definition_xrefs":["EC:2.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01814":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GART-RXN","Reactome:R-HSA-73813","RHEA:15053"],"synonyms":[{"name":"10-formyltetrahydrofolate:5'-phosphoribosylglycinamide N-formyltransferase activity","type":"related"},{"name":"2-amino-N-ribosylacetamide 5'-phosphate transformylase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide transformylase activity","type":"related"},{"name":"5,10-methenyltetrahydrofolate:2-amino-N-ribosylacetamide ribonucleotide transformylase activity","type":"related"},{"name":"GAR TFase activity","type":"related"},{"name":"GAR formyltransferase activity","type":"related"},{"name":"GAR transformylase activity","type":"related"},{"name":"GART activity","type":"related"},{"name":"glycinamide ribonucleotide transformylase activity","type":"related"}],"termid":"GO:0004644","terms_by_termid":{"GO:0004644":null}}


id: PBO:0038339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_added","termid":"PBO:0038339"}


id: PBO:0080259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 22 pseudogene","termid":"PBO:0080259"}


id: PR:O94484
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.03","synonyms":[{"name":"Spom972h-SPCC417.03","type":"exact"}],"termid":"PR:O94484"}


id: PBO:0067494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 629, pseudogene","termid":"PBO:0067494"}


id: MONDO:0001100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive enlargement of one or both breasts. Causes include pregnancy, obesity, and penicillamine therapy. It may result in neck, back, and shoulder pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophy of breast","secondary_identifiers":["ICD10CM:N62","SCTID:372281005","DOID:10688","UMLS:C0020565","icd11.foundation:2078176266","NCIT:C3125","MEDGEN:43789","ICD9:611.1"],"synonyms":[{"name":"breast Hypertrophy","type":"exact"},{"name":"breasts enlarged","type":"exact"},{"name":"drug-induced gigantomastia (subtype)","type":"related"},{"name":"gestational gigantomastia (subtype)","type":"related"},{"name":"gigantomastia","type":"exact"},{"name":"hypertrophy of the breast","type":"exact"},{"name":"idiopathic gigantomastia (subtype)","type":"related"},{"name":"juvenile gigantomastia (subtype)","type":"related"},{"name":"large breast","type":"exact"},{"name":"macromastia","type":"exact"},{"name":"medication-induced gigantomastia (subtype)","type":"related"},{"name":"pregnancy-induced gigantomastia (subtype)","type":"related"},{"name":"puberty-induced gigantomastia (subtype)","type":"related"}],"termid":"MONDO:0001100","xrefs":{"Monarch":{"xref_id":"0001100"}}}


id: MONDO:0014445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the LZTFL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"LZTFL1-related ciliopathy","termid":"MONDO:1040046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 17","secondary_identifiers":["MEDGEN:811538","UMLS:C3714980","DOID:0110139","GARD:16041","OMIM:615994"],"synonyms":[{"name":"BBS17","type":"exact"},{"name":"Bardet-Biedl syndrome 17","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in LZTFL1","type":"exact"},{"name":"Bardet-Biedl syndrome type 17","type":"exact"},{"name":"LZTFL1 Bardet-Biedl syndrome","type":"exact"}],"termid":"MONDO:0014445","xrefs":{"Monarch":{"xref_id":"0014445"}}}


id: GO:0016158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = D-myo-inositol 1,2,4,5,6-pentakisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"3-phytase activity","secondary_identifiers":["RHEA:16989","MetaCyc:RXN0-1001"],"synonyms":[{"name":"1-phytase activity","type":"related"},{"name":"myo-inositol-hexakisphosphate 3-phosphohydrolase activity","type":"related"},{"name":"myo-inositol-hexaphosphate 3-phosphohydrolase activity","type":"exact"},{"name":"phytase activity","type":"broad"},{"name":"phytate 1-phosphatase activity","type":"related"},{"name":"phytate 3-phosphatase activity","type":"exact"}],"termid":"GO:0016158"}


id: PBO:0076955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 3","termid":"PBO:0076955"}


id: PBO:0027119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_azygotic_meiosis_II","termid":"PBO:0027119"}


id: MONDO:0012626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the CEP290 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 4","secondary_identifiers":["UMLS:C1970161","DOID:0070118","OMIM:611134","GARD:15509","MEDGEN:410003"],"synonyms":[{"name":"CEP290 Meckel syndrome","type":"exact"},{"name":"MKS4","type":"exact"},{"name":"Meckel syndrome 4","type":"related"},{"name":"Meckel syndrome caused by mutation in CEP290","type":"exact"},{"name":"Meckel syndrome, type 4","type":"exact"},{"name":"Meckel-Gruber syndrome, type 4","type":"exact"},{"name":"Meckel-like Cerebrorenodigital syndrome","type":"related"}],"termid":"MONDO:0012626","xrefs":{"Monarch":{"xref_id":"0012626"}}}


id: PBO:0031843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system_morphology","termid":"PBO:0031843"}


id: PR:O74544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtr2 gene.","definition_xrefs":["UniProtKB:O74544","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"Spom972h-gtr2","type":"exact"}],"termid":"PR:O74544"}


id: PBO:0042496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 16","termid":"PBO:0042496"}


id: GO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + glyoxylate + H2O = 3-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:10500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-ethylmalate synthase activity","secondary_identifiers":["MetaCyc:3-ETHYLMALATE-SYNTHASE-RXN","EC:2.3.3.7","KEGG_REACTION:R01180"],"synonyms":[{"name":"2-ethyl-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"3-ethylmalate glyoxylate-lyase (CoA-butanoylating) activity","type":"related"},{"name":"butanoyl-CoA:glyoxylate C-butanoyltransferase (thioester-hydrolysing, 1-carboxypropyl-forming)","type":"related"}],"termid":"GO:0050441"}


id: GO:1902800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphodiesterase I activity.","definition_xrefs":["PMID:24559510","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclease activity","termid":"GO:0032075"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphodiesterase I activity","synonyms":[{"name":"activation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"activation of 5'-phosphodiesterase activity","type":"related"},{"name":"activation of 5'NPDE activity","type":"related"},{"name":"activation of PDE I activity","type":"narrow"},{"name":"activation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"narrow"},{"name":"activation of 5'-NPDase activity","type":"related"},{"name":"activation of 5'-PDE activity","type":"related"},{"name":"activation of 5'-PDase activity","type":"related"},{"name":"activation of 5'-exonuclease activity","type":"related"},{"name":"activation of alkaline phosphodiesterase activity","type":"related"},{"name":"activation of exonuclease I activity","type":"related"},{"name":"activation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"narrow"},{"name":"activation of oligonucleate 5'-nucleotidohydrolase activity","type":"narrow"},{"name":"activation of orthophosphoric diester phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphodiesterase I activity","type":"narrow"},{"name":"positive regulation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"exact"},{"name":"positive regulation of 5'-NPDase activity","type":"related"},{"name":"positive regulation of 5'-PDE activity","type":"related"},{"name":"positive regulation of 5'-PDase activity","type":"related"},{"name":"positive regulation of 5'-exonuclease activity","type":"related"},{"name":"positive regulation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"positive regulation of 5'-phosphodiesterase activity","type":"related"},{"name":"positive regulation of 5'NPDE activity","type":"related"},{"name":"positive regulation of PDE I activity","type":"exact"},{"name":"positive regulation of alkaline phosphodiesterase activity","type":"related"},{"name":"positive regulation of exonuclease I activity","type":"related"},{"name":"positive regulation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"exact"},{"name":"positive regulation of oligonucleate 5'-nucleotidohydrolase activity","type":"exact"},{"name":"positive regulation of orthophosphoric diester phosphohydrolase activity","type":"exact"},{"name":"up regulation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"exact"},{"name":"up regulation of 5'-NPDase activity","type":"related"},{"name":"up regulation of 5'-PDE activity","type":"related"},{"name":"up regulation of 5'-PDase activity","type":"related"},{"name":"up regulation of 5'-exonuclease activity","type":"related"},{"name":"up regulation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"up regulation of 5'-phosphodiesterase activity","type":"related"},{"name":"up regulation of 5'NPDE activity","type":"related"},{"name":"up regulation of PDE I activity","type":"exact"},{"name":"up regulation of alkaline phosphodiesterase activity","type":"related"},{"name":"up regulation of exonuclease I activity","type":"related"},{"name":"up regulation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"exact"},{"name":"up regulation of oligonucleate 5'-nucleotidohydrolase activity","type":"exact"},{"name":"up regulation of orthophosphoric diester phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphodiesterase I activity","type":"exact"},{"name":"up-regulation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"exact"},{"name":"up-regulation of 5'-NPDase activity","type":"related"},{"name":"up-regulation of 5'-PDE activity","type":"related"},{"name":"up-regulation of 5'-PDase activity","type":"related"},{"name":"up-regulation of 5'-exonuclease activity","type":"related"},{"name":"up-regulation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"up-regulation of 5'-phosphodiesterase activity","type":"related"},{"name":"up-regulation of 5'NPDE activity","type":"related"},{"name":"up-regulation of PDE I activity","type":"exact"},{"name":"up-regulation of alkaline phosphodiesterase activity","type":"related"},{"name":"up-regulation of exonuclease I activity","type":"related"},{"name":"up-regulation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"exact"},{"name":"up-regulation of oligonucleate 5'-nucleotidohydrolase activity","type":"exact"},{"name":"up-regulation of orthophosphoric diester phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphodiesterase I activity","type":"exact"},{"name":"upregulation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"exact"},{"name":"upregulation of 5'-NPDase activity","type":"related"},{"name":"upregulation of 5'-PDE activity","type":"related"},{"name":"upregulation of 5'-PDase activity","type":"related"},{"name":"upregulation of 5'-exonuclease activity","type":"related"},{"name":"upregulation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"upregulation of 5'-phosphodiesterase activity","type":"related"},{"name":"upregulation of 5'NPDE activity","type":"related"},{"name":"upregulation of PDE I activity","type":"exact"},{"name":"upregulation of alkaline phosphodiesterase activity","type":"related"},{"name":"upregulation of exonuclease I activity","type":"related"},{"name":"upregulation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"exact"},{"name":"upregulation of oligonucleate 5'-nucleotidohydrolase activity","type":"exact"},{"name":"upregulation of orthophosphoric diester phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphodiesterase I activity","type":"exact"}],"termid":"GO:1902800"}


id: PBO:0067559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 712, pseudogene","termid":"PBO:0067559"}


id: PBO:0060737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 2","termid":"PBO:0060737"}


id: MOD:01135
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex-HexNAc","termid":"MOD:01135"}


id: GO:0033756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Oplophorus luciferin + O2 = oxidized Oplophorus luciferin + CO2 + hnu.","definition_xrefs":["EC:1.13.12.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Oplophorus-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:20417","MetaCyc:RXN-3361"],"synonyms":[{"name":"Oplophorus luciferase activity","type":"related"},{"name":"Oplophorus-luciferin:oxygen 2-oxidoreductase (decarboxylating) activity","type":"related"}],"termid":"GO:0033756"}


id: PBO:0016898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug35","termid":"PBO:0016898"}


id: PBO:0066210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 3","termid":"PBO:0066210"}


id: GO:0033495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ferulate, (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferulate metabolic process","termid":"GO:0033494"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ferulate biosynthetic process","synonyms":[{"name":"ferulate anabolism","type":"exact"},{"name":"ferulate biosynthesis","type":"exact"},{"name":"ferulate formation","type":"exact"},{"name":"ferulate synthesis","type":"exact"}],"termid":"GO:0033495"}


id: MONDO:0100055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intraosseous spindle cell rhabdomyosarcoma characterized by the fusion of the EWSR1 or FUS gene with the TFCP2 gene, or the MEIS1 gene with the NCOA2 gene.","definition_xrefs":["NCIT:C178236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intraosseous spindle cell rhabdomyosarcoma with TFCP2/NCOA2 rearrangements","secondary_identifiers":["MEDGEN:1791329","UMLS:C5554888"],"synonyms":[{"name":"intraosseous rhabdomyosarcoma defined by FUS-TFCP2 fusion","type":"related"},{"name":"intraosseous rhabdomyosarcoma with FUS-TFCP2 fusion","type":"narrow"}],"termid":"MONDO:0100055","xrefs":{"Monarch":{"xref_id":"0100055"}}}


id: GO:0016665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, an iron-sulfur protein, oxygen, NAD or NADP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors (obsolete GO:0016665)","synonyms":[{"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors","type":"exact"}],"termid":"GO:0016665"}


id: MONDO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary polyadenomatosis is characterized by the presence in both breasts of multiple voluminous fibroadenomas with heterogeneous echo patterns.","definition_xrefs":["Orphanet:50920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple fibroadenoma of the breast","secondary_identifiers":["OMIM:615554","MEDGEN:816248","UMLS:C3809918"],"synonyms":[{"name":"MFAB","type":"related"},{"name":"mammary polyadenomatosis","type":"exact"},{"name":"multiple fibroadenomas of the breast","type":"related"}],"termid":"MONDO:0014249","xrefs":{"Monarch":{"xref_id":"0014249"}}}


id: PBO:0050612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 4","termid":"PBO:0050612"}


id: PBO:0090736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1","termid":"PBO:0090736"}


id: FYPO:0004653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0004803","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of actomyosin contractile ring contraction","synonyms":[{"name":"delayed actomyosin contractile ring contraction","type":"exact"},{"name":"delayed onset of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"delayed onset of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"delayed onset of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"delayed onset of mitotic contractile ring contraction","type":"exact"},{"name":"increased dwell time before actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0004653"}


id: PBO:0055186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2610","termid":"PBO:0055186"}


id: GO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction pathway (obsolete GO:0052525)","synonyms":[{"name":"activation by host of symbiont signal transduction pathway","type":"narrow"},{"name":"stimulation by host of symbiont signal transduction pathway","type":"narrow"},{"name":"up regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"up-regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"upregulation by host of symbiont signal transduction pathway","type":"exact"}],"termid":"GO:0052525"}


id: PBO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 2","termid":"PBO:0070864"}


id: GO:0030518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a steroid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone receptor signaling pathway","termid":"GO:0043401"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated steroid hormone signaling pathway","synonyms":[{"name":"intracellular steroid hormone receptor signaling pathway","type":"exact"},{"name":"steroid hormone receptor signaling pathway","type":"broad"},{"name":"steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0030518"}


id: PBO:0068485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 67, pseudogene","termid":"PBO:0068485"}


id: GO:0141152
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62976,69614],"is_not":false,"summary":null,"term":"GO:0141152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:11092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0047952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R00842","EC:1.1.1.8","MetaCyc:1.1.1.8-RXN"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"NAD-L-glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-alpha-glycerophosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-linked glycerol 3-phosphate dehydrogenase activity","type":"exact"},{"name":"NADH-dihydroxyacetone phosphate reductase activity","type":"exact"},{"name":"alpha-glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"alpha-glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol 1-phosphate dehydrogenase activity","type":"broad"},{"name":"glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase [NAD+] activity","type":"exact"},{"name":"glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0141152","terms_by_termid":{"GO:0141152":null}}


id: GO:0002653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"down regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"down-regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"downregulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"inhibition of tolerance induction dependent upon immune response","type":"narrow"},{"name":"negative regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002653"}


id: PBO:0076070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STRA6 like, pseudogene","termid":"PBO:0076070"}


id: MONDO:0100067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell rhabdomyosarcoma occurring in children.","definition_xrefs":["NCIT:C123397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood spindle cell rhabdomyosarcoma","secondary_identifiers":["MEDGEN:882003","UMLS:C4055242"],"termid":"MONDO:0100067","xrefs":{"Monarch":{"xref_id":"0100067"}}}


id: GO:0030808
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide anabolism","type":"exact"},{"name":"regulation of nucleotide biosynthesis","type":"exact"},{"name":"regulation of nucleotide formation","type":"exact"},{"name":"regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030808","terms_by_termid":{"GO:1905707":null}}


id: GO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"D-xylose transmembrane transport","synonyms":[{"name":"D-xylose transport","type":"related"}],"termid":"GO:0015753"}


id: PBO:0083189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YJL225C","termid":"PBO:0083189"}


id: GO:0015131
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88768],"is_not":false,"summary":null,"term":"GO:0015131"}]},"cv_name":"molecular_function","definition":"Enables the transfer of oxaloacetate, the anion of oxobutanedioic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"oxaloacetate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015131","terms_by_termid":{"GO:0015131":null}}


id: GO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a glycoprotein from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein transmembrane transporter activity (obsolete GO:0034437)","synonyms":[{"name":"glycoprotein transporter activity","type":"related"}],"termid":"GO:0034437"}


id: PBO:0054233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1615","termid":"PBO:0054233"}


id: PBO:0069919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1211, pseudogene","termid":"PBO:0069919"}


id: PBO:0012276
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc-Fifteen-Interacting C2 domain","termid":"PBO:0012276"}


id: PBO:0053768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1013","termid":"PBO:0053768"}


id: PBO:0062877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthodenticle homeobox 1","termid":"PBO:0062877"}


id: PBO:0068438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 8, pseudogene","termid":"PBO:0068438"}


id: GO:0000104
data:
  {"annotated_genes":["SJAG_01671","SJAG_00203","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[76378,66524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.","definition_xrefs":["RHEA:16357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"succinate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0019739","KEGG_REACTION:R00412"],"synonyms":[{"name":"fumarate dehydrogenase activity","type":"exact"},{"name":"fumarate reductase activity","type":"exact"},{"name":"fumaric hydrogenase activity","type":"related"},{"name":"succinate oxidoreductase activity","type":"exact"},{"name":"succinic acid dehydrogenase activity","type":"exact"},{"name":"succinic dehydrogenase activity","type":"broad"},{"name":"succinodehydrogenase activity","type":"exact"},{"name":"succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:0000104","terms_by_termid":{"GO:0008177":null,"GO:0016156":null}}


id: GO:0036384
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114351],"is_not":false,"summary":null,"term":"GO:0036384"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP + H2O = CMP + phosphate.","definition_xrefs":["GOC:al","RHEA:64880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"CDP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDP diphosphatase activity","type":"broad"},{"name":"CDPase activity","type":"exact"},{"name":"cytidine diphosphatase activity","type":"exact"},{"name":"cytidine-diphosphatase activity","type":"exact"}],"termid":"GO:0036384","terms_by_termid":{"GO:0036384":null}}


id: GO:0044248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular catabolic process (obsolete GO:0044248)","synonyms":[{"name":"cellular breakdown","type":"exact"},{"name":"cellular catabolism","type":"exact"},{"name":"cellular degradation","type":"exact"}],"termid":"GO:0044248"}


id: PBO:0054967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2381","termid":"PBO:0054967"}


id: PBO:0088399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L14","termid":"PBO:0088399"}


id: GO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hepatocyte growth factor","synonyms":[{"name":"response to HGF stimulus","type":"exact"},{"name":"response to hepatocyte growth factor stimulus","type":"exact"}],"termid":"GO:0035728"}


id: PBO:0074630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 25","termid":"PBO:0074630"}


id: MONDO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","secondary_identifiers":["MESH:C538120","OMIM:235750","MEDGEN:341065","UMLS:C1856111","MESH:C565517"],"synonyms":[{"name":"Hirschsprung disease polydactyly heart disease","type":"related"},{"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","type":"exact"}],"termid":"MONDO:0009343","xrefs":{"Monarch":{"xref_id":"0009343"}}}


id: GO:0014868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which cross bridges are broken and reformed during filament sliding as part of the regulation of the velocity of shortening in skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cross bridge cycling involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014868"}


id: PR:Q9HE00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metaxin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.04","secondary_identifiers":["UniProtKB:Q9HE00"],"synonyms":[{"name":"Spom972h-MTX2","type":"exact"}],"termid":"PR:Q9HE00"}


id: PBO:0012560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 subunit Pre5 (predicted)","termid":"PBO:0012560"}


id: PBO:0058506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5696","termid":"PBO:0058506"}


id: GO:0075184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont infection cushion formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"infection cushion formation","termid":"GO:0075183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of infection cushion formation","synonyms":[{"name":"regulation of infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075184"}


id: PBO:0003945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 gamma subunit (predicted)","termid":"PBO:0003945"}


id: PBO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Avt5","termid":"PBO:0003220"}


id: PBO:0043748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 2","termid":"PBO:0043748"}


id: PBO:0039889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 44","termid":"PBO:0039889"}


id: MONDO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase deficiency","secondary_identifiers":["Orphanet:309120","SCTID:82319005","GARD:21318","UMLS:C0268635","MEDGEN:541378"],"termid":"MONDO:0017714","xrefs":{"Monarch":{"xref_id":"0017714"}}}


id: MONDO:0022173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 11","termid":"MONDO:0016932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11q trisomy","secondary_identifiers":["GARD:20882","MEDGEN:167075","MESH:C538297","Orphanet:262923","UMLS:C0795842"],"synonyms":[{"name":"11q duplication","type":"exact"},{"name":"11q trisomy","type":"exact"},{"name":"Duplication 11q","type":"exact"},{"name":"chromosome 11q duplication","type":"exact"},{"name":"partial duplication of chromosome 11q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 11","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 11","type":"exact"},{"name":"partial trisomy 11q","type":"exact"},{"name":"partial trisomy of chromosome 11q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 11","type":"exact"},{"name":"trisomy 11q","type":"exact"}],"termid":"MONDO:0022173","xrefs":{"Monarch":{"xref_id":"0022173"}}}


id: PBO:0038578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 2, BRISC complex subunit","termid":"PBO:0038578"}


id: MONDO:0859569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Braddock-Carey syndrome","termid":"MONDO:0031646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Braddock-Carey syndrome 1","secondary_identifiers":["UMLS:C5774188","MEDGEN:1823961","OMIM:619980"],"termid":"MONDO:0859569","xrefs":{"Monarch":{"xref_id":"0859569"}}}


id: PBO:0091367
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rad51delta single mutant","termid":"PBO:0091367"}


id: FYPO:0007201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization to the site of cell division is decreased.","definition_xrefs":["PMID:30201262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of actin cortical patch localization","termid":"FYPO:0006176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of actin cortical patch localization to cell division site","synonyms":[{"name":"decreased rate of actin cortical patch localisation to cell division site","type":"exact"},{"name":"decreased rate of actin cortical patch localization to cell division site during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cortical patch localization to cell division site during vegetative growth","type":"exact"},{"name":"decreased rate of actin cortical patch movement to cell division site","type":"related"},{"name":"decreased rate of actin patch localization to cell division site","type":"exact"},{"name":"reduced rate of actin cortical patch localization to cell division site","type":"exact"}],"termid":"FYPO:0007201"}


id: GO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-12 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 receptor activity","synonyms":[{"name":"IL-12 receptor activity","type":"exact"},{"name":"IL-12R","type":"exact"}],"termid":"GO:0016517"}


id: PR:000027538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste11 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11","synonyms":[{"name":"STE11","type":"related"},{"name":"STEX","type":"related"},{"name":"ste11","type":"exact"}],"termid":"PR:000027538"}


id: PBO:0032720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spherical_cell_with_cell_lysis","termid":"PBO:0032720"}


id: GO:0140831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-asparagine(out) + Na+(out) = H+(out) + L-asparagine(in) + Na+(in).","definition_xrefs":["PMID:10619430","PMID:11742981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine transmembrane transporter activity","termid":"GO:0015182"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-asparagine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71131"],"termid":"GO:0140831"}


id: SO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of characterized repeat sequences.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000187 repeat_family (obsolete SO:0000187)","termid":"SO:0000187"}


id: PR:Q9US04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyltranspeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.09","secondary_identifiers":["UniProtKB:Q9US04"],"synonyms":[{"name":"Spom972h-GGT1","type":"exact"},{"name":"gamma-glutamyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US04"}


id: GO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of exocyst assembly.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocyst assembly","termid":"GO:0001928"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"negatively_regulates","term_name":"exocyst assembly","termid":"GO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0065003","GO:0044085","GO:0140056","GO:0016192"],"is_obsolete":false,"name":"negative regulation of exocyst assembly","synonyms":[{"name":"down regulation of exocyst assembly","type":"exact"},{"name":"down-regulation of exocyst assembly","type":"exact"},{"name":"downregulation of exocyst assembly","type":"exact"},{"name":"inhibition of exocyst assembly","type":"narrow"}],"termid":"GO:0001929"}


id: GO:0001732
data:
  {"annotated_genes":["SJAG_04744","SJAG_00662","SJAG_04981","SJAG_03472","SJAG_02628","SJAG_02164","SJAG_04891","SJAG_03147","SJAG_02376","SJAG_02390","SJAG_02995","SJAG_04900"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59209,59643,59909,62488,63986,64173,68837,69855,72298,75473,97208,99288],"is_not":false,"summary":null,"term":"GO:0001732"}]},"cv_name":"biological_process","definition":"Joining of the large ribosomal subunit with the translation preinitiation complex, with release of IF2/eIF2 and IF3/eIF3 or IF5B/eIF5B. This leaves the functional ribosome at the AUG, with the methionyl/formyl-methionyl-tRNA positioned at the P site.","definition_xrefs":["PMID:29735639","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_02164":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0002181","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"formation of cytoplasmic translation initiation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic translation initiation complex assembly","type":"exact"},{"name":"formation of translation initiation complex","type":"broad"},{"name":"translation initiation complex assembly","type":"broad"}],"termid":"GO:0001732","terms_by_termid":{"GO:0001732":null}}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: SO:1000185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant effect, causing an intron to be gained by the processed transcript; usually a result of a donor acceptor mutation (SO:1000072).","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000185 sequence_variant_causes_intron_gain (obsolete SO:1000185)","synonyms":[{"name":"mutation causes intron gain","type":"related"},{"name":"sequence variant causes intron gain","type":"exact"}],"termid":"SO:1000185"}


id: PBO:0113136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General post-initiation mitochondrial translation factor; peripherally associated with the matrix side of the mitochondrial inner membrane; interacts with mitoribosomal proteins in actively translating cells; human ortholog TACO1 complements the yeast null mutant","termid":"PBO:0113136"}


id: PR:O14116
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C328.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.01c","secondary_identifiers":["UniProtKB:O14116"],"synonyms":[{"name":"Spom972h-XPO5","type":"exact"}],"termid":"PR:O14116"}


id: GO:1903655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 2 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:19328067","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903655)","termid":"GO:1903655"}


id: GO:0009049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor by an aspartic endopeptidase mechanism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartic-type signal peptidase activity (obsolete GO:0009049)","synonyms":[{"name":"aspartic-type signal peptidase activity","type":"exact"}],"termid":"GO:0009049"}


id: GO:0043959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-beta-methylmalyl-CoA = glyoxylate + propanoyl-CoA.","definition_xrefs":["RHEA:38259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-erythro-3-methylmalyl-CoA lyase activity","synonyms":[{"name":"HpcH/HpaI aldolase","type":"related"}],"termid":"GO:0043959"}


id: MOD:01022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2-piperidinecarboxylic acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-piperidinecarboxylic acid","synonyms":[{"name":"Pip","type":"exact"}],"termid":"MOD:01022"}


id: GO:0070172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"positively_regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tooth mineralization","termid":"GO:0070172"}


id: PBO:0076905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 261","termid":"PBO:0076905"}


id: PR:Q9P7X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein PSF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03092","PANTHER:PTHR12914:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein psf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.09","secondary_identifiers":["UniProtKB:Q9P7X6"],"synonyms":[{"name":"Spom972h-GINS1","type":"exact"}],"termid":"PR:Q9P7X6"}


id: FYPO:0007637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:33434270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin mobility","synonyms":[{"name":"decreased chromatin mobility during mitotic cell cycle","type":"related"},{"name":"decreased chromatin mobility during vegetative growth","type":"exact"},{"name":"decreased chromatin motility","type":"exact"},{"name":"decreased chromatin movement","type":"exact"},{"name":"reduced chromatin mobility","type":"exact"}],"termid":"FYPO:0007637"}


id: PBO:0049727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 8","termid":"PBO:0049727"}


id: GO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"}


id: MONDO:0009872
data:
  {"annotated_genes":["SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87438],"is_not":false,"summary":null,"term":"MONDO:0009872"}]},"cv_name":"mondo","definition":"Bjrnstad syndrome is characterized by congenital sensorineural hearing loss and pili torti. Less than fifty cases have been reported so far. The hearing loss usually becomes evident very early in life, often in the first year. Pili torti, a condition in which the hair shaft is flattened and twisted, makes the hair very brittle and patients develop hair loss in the first two years of life. Bjrnstad syndrome is transmitted as an autosomal recessive condition. It is caused by mutations in the BCS1L gene. Mutations in this gene also cause GRACILE syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bjornstad syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:123","OMIM:262000","GARD:22","MESH:C537633","DOID:0050677","UMLS:C0266006","MEDGEN:82728"],"synonyms":[{"name":"BJS","type":"related"},{"name":"BJörnstad syndrome","type":"related"},{"name":"Bjornstad syndrome","type":"exact"},{"name":"Björnstad Syndrome","type":"exact"},{"name":"PTD","type":"related"},{"name":"PTND","type":"related"},{"name":"deafness and pili torti, Bjornstad type","type":"related"},{"name":"deafness-pili torti-hypogonadism syndrome","type":"exact"},{"name":"pili torti and nerve deafness","type":"related"},{"name":"pili torti-sensorineural hearing loss","type":"related"}],"termid":"MONDO:0009872","terms_by_termid":{"MONDO:0009872":null},"xrefs":{"Monarch":{"xref_id":"0009872"}}}


id: GO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"specification of animal organ identity","termid":"GO:0010092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ induction","synonyms":[{"name":"induction of an organ","type":"exact"}],"termid":"GO:0001759"}


id: PBO:0045687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 7","termid":"PBO:0045687"}


id: PBO:0053521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 515","termid":"PBO:0053521"}


id: PBO:0041108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 1","termid":"PBO:0041108"}


id: FYPO:0000490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion organization","termid":"FYPO:0000809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrial genome maintenance","synonyms":[{"name":"loss of mitochondrial DNA","type":"narrow"},{"name":"mitochondrial DNA depletion","type":"narrow"},{"name":"mitochondrial genome maintenance: abnormal","type":"related"}],"termid":"FYPO:0000490"}


id: GO:0047845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxylimonoate + H2O = deoxylimononate D-ring-lactone + H+.","definition_xrefs":["EC:3.1.1.46","RHEA:14997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"deoxylimonate A-ring-lactonase activity","secondary_identifiers":["MetaCyc:DEOXYLIMONATE-A-RING-LACTONASE-RXN","KEGG_REACTION:R03803"],"synonyms":[{"name":"deoxylimonate A-ring-lactonohydrolase activity","type":"related"}],"termid":"GO:0047845"}


id: PR:P78860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.15c","secondary_identifiers":["UniProtKB:P78860"],"synonyms":[{"name":"21S rRNA (uridine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ2","type":"exact"}],"termid":"PR:P78860"}


id: MOD:00325
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-beta-methylthioasparagine.","definition_xrefs":["RESID:AA0320","Unimod:39#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-beta-methylthioasparagine","synonyms":[{"name":"(2R,3Xi)-2-amino-3-(methylsulfanyl)-4-butanediamic acid","type":"exact"},{"name":"2,4-diamino-3-(methylsulfanyl)-4-oxobutanoic acid","type":"exact"},{"name":"3-(methylthio)-L-asparagine","type":"exact"},{"name":"3-carboxamido-S-methyl-cysteine","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"Methylthio","type":"related"},{"name":"beta-(methylthio)asparagine","type":"exact"}],"termid":"MOD:00325"}


id: MONDO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the pupil.","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pupil disorder","secondary_identifiers":["SCTID:68633000","MEDGEN:11038","DOID:238","UMLS:C0034124"],"synonyms":[{"name":"disease of pupil","type":"exact"},{"name":"disease or disorder of pupil","type":"exact"},{"name":"disorder of pupil","type":"exact"},{"name":"pupil disease","type":"exact"},{"name":"pupil disease or disorder","type":"exact"},{"name":"pupillary disorder","type":"exact"}],"termid":"MONDO:0002285","xrefs":{"Monarch":{"xref_id":"0002285"}}}


id: MONDO:1011343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perceptual disorders that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"},{"relation_name":"is_a","term_name":"psychiatric disorder, non-human animal","termid":"MONDO:1011351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perceptual disorders, non-human animal","termid":"MONDO:1011343","xrefs":{"Monarch":{"xref_id":"1011343"}}}


id: MONDO:0013293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the PRSS56 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 6","secondary_identifiers":["DOID:0060835","UMLS:C3150757","GARD:18628","MEDGEN:462107","OMIM:613517"],"synonyms":[{"name":"MCOP6","type":"exact"},{"name":"PRSS56 isolated microphthalmia","type":"exact"},{"name":"isolated microphthalmia caused by mutation in PRSS56","type":"exact"},{"name":"isolated microphthalmia type 6","type":"exact"},{"name":"microphthalmia, isolated 6","type":"related"},{"name":"microphthalmia, isolated type 6","type":"exact"},{"name":"microphthalmia, posterior nonsyndromic","type":"related"},{"name":"posterior nonsyndromic microphthalmia","type":"exact"}],"termid":"MONDO:0013293","xrefs":{"Monarch":{"xref_id":"0013293"}}}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: PBO:0077922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 13","termid":"PBO:0077922"}


id: PBO:0044180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNBL1 pseudogene 1","termid":"PBO:0044180"}


id: PBO:0081230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYND10 antisense RNA 1","termid":"PBO:0081230"}


id: MONDO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoproterenol-mediated vasodilatation","secondary_identifiers":["OMIM:600801","UMLS:C1833276","MEDGEN:331475"],"synonyms":[{"name":"isoproterenol-mediated vasodilatation","type":"exact"}],"termid":"MONDO:0010937","xrefs":{"Monarch":{"xref_id":"0010937"}}}


id: GO:0140373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of one or more ubiquitin groups to a lysine residue at position 14 of the histone.","definition_xrefs":["GOC:mah","PMID:31468675"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K14 ubiquitination (obsolete GO:0140373)","synonyms":[{"name":"histone H3 ubiquitination at K14","type":"exact"},{"name":"histone H3-K14 ubiquitylation","type":"exact"},{"name":"histone H3K14 ubiquitination","type":"exact"}],"termid":"GO:0140373"}


id: MONDO:0010326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the ARHGEF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 46","secondary_identifiers":["MEDGEN:337255","MESH:C564513","OMIM:300436","UMLS:C1845526","DOID:0112055","GARD:22677"],"synonyms":[{"name":"ARHGEF6 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX46","type":"related"},{"name":"intellectual disability, X-linked 46","type":"exact"},{"name":"intellectual disability, X-linked type 46","type":"exact"},{"name":"mental retardation, X-linked 46","type":"related"},{"name":"mental retardation, X-linked 46, X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked type 46","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in ARHGEF6","type":"exact"}],"termid":"MONDO:0010326","xrefs":{"Monarch":{"xref_id":"0010326"}}}


id: MONDO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious viral infection caused by the mumps virus. Symptoms include swollen and tender parotid glands, fever, muscle aches and fatigue. Due to vaccination programs, mumps has become a rare disease.","definition_xrefs":["NCIT:C29888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mumps infectious disease","secondary_identifiers":["DOID:10264","ICD10CM:B26","EFO:0007383","ICD9:072","SCTID:36989005","UMLS:C0026780","MEDGEN:44521","MESH:D009107","MESH:D019351","MONDO:0005863"],"synonyms":[{"name":"Mumps virus caused disease or disorder","type":"exact"},{"name":"Mumps virus disease or disorder","type":"exact"},{"name":"Mumps virus infectious disease","type":"exact"},{"name":"epidemic parotitis","type":"exact"},{"name":"mumps","type":"exact"},{"name":"mumps virus infectious disease","type":"related"}],"termid":"MONDO:0000989","xrefs":{"Monarch":{"xref_id":"0000989"}}}


id: MOD:00586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to pyridyl thiol","synonyms":[{"name":"PET","type":"related"},{"name":"phosphorylation to pyridyl thiol","type":"related"}],"termid":"MOD:00586"}


id: PBO:0088783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Atf31","termid":"PBO:0088783"}


id: PBO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA transporter (predicted)","termid":"PBO:0003709"}


id: PBO:0087467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a replication-pausing checkpoint complex; Tof1p-Mrc1p-Csm3p acts at the stalled replication fork to promote sister chromatid cohesion after DNA damage, facilitating gap repair of damaged DNA; interacts with the MCM helicase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087467"}


id: GO:0034734
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the TFIIIC complex, observed in human. The complex is poorly characterized, but contains the 250-kDa form of HsBdp1, and is thought to include nuclear factor 1 (NF1). It stimulates binding by human TFIIIC2 and is required for transcription activity.","definition_xrefs":["GOC:mah","PMID:11433012","PMID:15096501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"},{"relation_name":"part_of","term_name":"transcription factor TFIIIC complex","termid":"GO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIC1 complex","termid":"GO:0034734"}


id: GO:0034790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (+)-(3S,4R)-cis-3,4-dihydroxy-3,4-dihydrofluorene = 3,4-dihydroxyfluorene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,4-dihydroxy-3,4-dihydrofluorene dehydrogenase activity (obsolete GO:0034790)","termid":"GO:0034790"}


id: PBO:0044891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1 pseudogene 2","termid":"PBO:0044891"}


id: PBO:0090946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein disulfide isomerase Pdi4","termid":"PBO:0090946"}


id: PBO:0088621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase Hac1","termid":"PBO:0088621"}


id: GO:0008300
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isoprenoid catabolic process","references_by_uniquename":{"GO_REF:0000104":null},"secondary_identifiers":["GO:0016097"],"synonyms":[{"name":"isoprenoid breakdown","type":"exact"},{"name":"isoprenoid catabolism","type":"exact"},{"name":"isoprenoid degradation","type":"exact"},{"name":"polyisoprenoid breakdown","type":"narrow"},{"name":"polyisoprenoid catabolic process","type":"narrow"},{"name":"polyisoprenoid catabolism","type":"narrow"},{"name":"polyisoprenoid degradation","type":"narrow"},{"name":"polyterpene catabolic process","type":"narrow"},{"name":"polyterpene catabolism","type":"narrow"}],"termid":"GO:0008300","terms_by_termid":{"GO:0016095":null}}


id: PBO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 15","termid":"PBO:0070342"}


id: PBO:0027188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_F-actin_level_in_actomyosin_contractile_ring_during_early_mitosis","termid":"PBO:0027188"}


id: PBO:0051109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-46","termid":"PBO:0051109"}


id: PBO:0050753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 15","termid":"PBO:0050753"}


id: PBO:0076628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TANK binding kinase 1","termid":"PBO:0076628"}


id: PBO:0068198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 505","termid":"PBO:0068198"}


id: GO:0004683
data:
  {"annotated_genes":["SJAG_02249","SJAG_01855","SJAG_03486","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73692,75553,93928,116880],"is_not":false,"summary":null,"term":"GO:0004683"}]},"cv_name":"molecular_function","definition":"Calmodulin-dependent catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate. This activity require the presence of calcium-bound calmodulin.","definition_xrefs":["PMID:11264466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01855":null,"SJAG_02249":null,"SJAG_02858":null,"SJAG_03486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0016740","GO:0003674","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004684","Reactome:R-HSA-9617583","GO:0004685","Reactome:R-HSA-9618750","Reactome:R-HSA-442749","Reactome:R-HSA-9619367","GO:0004688","Reactome:R-HSA-9619355","Reactome:R-HSA-9619478","Reactome:R-HSA-9006992","Reactome:R-HSA-9619783","Reactome:R-HSA-9619125","Reactome:R-HSA-416320","EC:2.7.11.17","Reactome:R-HSA-111912","Reactome:R-HSA-111915"],"synonyms":[{"name":"ATP:caldesmon O-phosphotransferase activity","type":"narrow"},{"name":"ATP:protein phosphotransferase (Ca2+/calmodulin-dependent) activity","type":"related"},{"name":"CAM PKII","type":"related"},{"name":"Ca2+/CaM-dependent kinase activity","type":"exact"},{"name":"Ca2+/calmodulin-dependent microtubule-associated protein 2 kinase activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase 1 activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase II activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase IV activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase activity","type":"related"},{"name":"Ca2+/calmodulin-dependent protein kinase kinase activity","type":"narrow"},{"name":"Ca2+/calmodulin-dependent protein kinase kinase beta activity","type":"narrow"},{"name":"CaM kinase II activity","type":"narrow"},{"name":"CaM kinase activity","type":"related"},{"name":"CaM-regulated serine/threonine kinase activity","type":"related"},{"name":"CaMKI","type":"related"},{"name":"CaMKII","type":"related"},{"name":"CaMKIV","type":"related"},{"name":"CaMKKalpha","type":"related"},{"name":"CaMKKbeta","type":"related"},{"name":"STK20","type":"related"},{"name":"calcium- and calmodulin-dependent protein kinase activity","type":"exact"},{"name":"calcium/calmodulin-dependent protein kinase type II activity","type":"narrow"},{"name":"caldesmon kinase (phosphorylating) activity","type":"narrow"},{"name":"calmodulin regulated protein kinase activity","type":"exact"},{"name":"calmodulin-dependent kinase II activity","type":"narrow"},{"name":"calmodulin-dependent protein kinase I activity","type":"narrow"},{"name":"calmodulin-dependent protein kinase activity","type":"exact"},{"name":"microtubule-associated protein 2 kinase activity","type":"related"},{"name":"multifunctional calcium- and calmodulin-regulated protein kinase activity","type":"related"},{"name":"multifunctional calcium/calmodulin regulated protein kinase activity","type":"related"}],"termid":"GO:0004683","terms_by_termid":{"GO:0004683":null}}


id: MONDO:0018718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vascular tumor with associated anomalies (obsolete MONDO:0018718)","secondary_identifiers":["Orphanet:458827"],"termid":"MONDO:0018718","xrefs":{"Monarch":{"xref_id":"0018718"}}}


id: GO:1902351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an imidacloprid stimulus.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23922869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to imidacloprid","termid":"GO:1902351"}


id: GO:2001273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import in response to insulin stimulus (obsolete GO:2001273)","synonyms":[{"name":"regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001273"}


id: PATO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000302 relative speed value (obsolete PATO:0000302)","termid":"PATO:0000302"}


id: PBO:0077913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 4","termid":"PBO:0077913"}


id: MONDO:0019001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biotin-responsive basal ganglia disease (obsolete MONDO:0019001)","termid":"MONDO:0019001","xrefs":{"Monarch":{"xref_id":"0019001"}}}


id: PR:Q9UT75
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA dimethylallyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00683","PANTHER:PTHR11088:SF21","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dimethylallyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.15","secondary_identifiers":["UniProtKB:Q9UT75"],"synonyms":[{"name":"IPP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TRIT1","type":"exact"},{"name":"isopentenyl-diphosphate: tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT75"}


id: PBO:0079232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC7B antisense RNA 1","termid":"PBO:0079232"}


id: FYPO:0003303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the post-anaphase array of microtubules is present in an abnormal location.","definition_xrefs":["PomBase:mah","PMID:9348288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"mislocalized post-anaphase array","synonyms":[{"name":"mislocalised post-anaphase array","type":"exact"},{"name":"mislocalized PAA","type":"exact"},{"name":"mislocalized post-anaphase array during mitotic cell cycle","type":"related"},{"name":"mislocalized post-anaphase array during vegetative growth","type":"exact"},{"name":"mislocalized post-anaphase microtubule array","type":"exact"}],"termid":"FYPO:0003303"}


id: GO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal amino acid with a broad specificity.","definition_xrefs":["EC:3.4.16.5"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase C activity (obsolete GO:0004186)","synonyms":[{"name":"carboxypeptidase C activity","type":"exact"},{"name":"carboxypeptidase Y activity","type":"related"},{"name":"cathepsin A activity","type":"narrow"},{"name":"deamidase","type":"related"},{"name":"lysosomal carboxypeptidase A","type":"narrow"},{"name":"lysosomal protective protein activity","type":"narrow"},{"name":"serine carboxypeptidase I activity","type":"related"},{"name":"serine-type carboxypeptidase I activity","type":"related"},{"name":"vacuolar carboxypeptidase Y","type":"narrow"}],"termid":"GO:0004186"}


id: MONDO:0006548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial Dermatosis, also known as facial dermatoses, is related tolipogranulomatosis. An important gene associated with Facial Dermatosis isCCNE1(cyclin E1). The drugsbetamethasoneandbetamethasone acetatehave been mentioned in the context of this disorder.","definition_xrefs":["EFO:1000698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"facial dermatosis","secondary_identifiers":["DOID:3134","MEDGEN:8760","UMLS:C0015456","MESH:D005148"],"termid":"MONDO:0006548","xrefs":{"Monarch":{"xref_id":"0006548"}}}


id: PBO:0002853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga3","termid":"PBO:0002853"}


id: FYPO:0001229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of all or part of the cell cortex is abnormal. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["GO:0005938","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cortex morphology","termid":"FYPO:0001229"}


id: GO:1901183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of camalexin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of phytoalexin biosynthetic process","termid":"GO:0052322"},{"relation_name":"positively_regulates","term_name":"camalexin biosynthetic process","termid":"GO:0010120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of camalexin biosynthetic process","synonyms":[{"name":"activation of camalexin anabolism","type":"exact"},{"name":"activation of camalexin biosynthesis","type":"exact"},{"name":"activation of camalexin biosynthetic process","type":"narrow"},{"name":"activation of camalexin formation","type":"exact"},{"name":"activation of camalexin synthesis","type":"exact"},{"name":"positive regulation of camalexin anabolism","type":"exact"},{"name":"positive regulation of camalexin biosynthesis","type":"exact"},{"name":"positive regulation of camalexin formation","type":"exact"},{"name":"positive regulation of camalexin synthesis","type":"exact"},{"name":"up regulation of camalexin anabolism","type":"exact"},{"name":"up regulation of camalexin biosynthesis","type":"exact"},{"name":"up regulation of camalexin biosynthetic process","type":"exact"},{"name":"up regulation of camalexin formation","type":"exact"},{"name":"up regulation of camalexin synthesis","type":"exact"},{"name":"up-regulation of camalexin anabolism","type":"exact"},{"name":"up-regulation of camalexin biosynthesis","type":"exact"},{"name":"up-regulation of camalexin biosynthetic process","type":"exact"},{"name":"up-regulation of camalexin formation","type":"exact"},{"name":"up-regulation of camalexin synthesis","type":"exact"},{"name":"upregulation of camalexin anabolism","type":"exact"},{"name":"upregulation of camalexin biosynthesis","type":"exact"},{"name":"upregulation of camalexin biosynthetic process","type":"exact"},{"name":"upregulation of camalexin formation","type":"exact"},{"name":"upregulation of camalexin synthesis","type":"exact"}],"termid":"GO:1901183"}


id: PBO:0077379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 120B","termid":"PBO:0077379"}


id: GO:1903349
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94982],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"Any membrane that is part of an omegasome.","definition_xrefs":["GOC:TermGenie","PMID:18725538","GOC:mf","PMID:24591649","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"omegasome","termid":"GO:1990462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"omegasome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903349","terms_by_termid":{"GO:0097629":null}}


id: GO:1900715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of violaceol I biosynthetic process","termid":"GO:1900713"},{"relation_name":"positively_regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of violaceol I biosynthetic process","synonyms":[{"name":"activation of violaceol I anabolism","type":"exact"},{"name":"activation of violaceol I biosynthesis","type":"exact"},{"name":"activation of violaceol I biosynthetic process","type":"narrow"},{"name":"activation of violaceol I formation","type":"exact"},{"name":"activation of violaceol I synthesis","type":"exact"},{"name":"positive regulation of violaceol I anabolism","type":"exact"},{"name":"positive regulation of violaceol I biosynthesis","type":"exact"},{"name":"positive regulation of violaceol I formation","type":"exact"},{"name":"positive regulation of violaceol I synthesis","type":"exact"},{"name":"up regulation of violaceol I anabolism","type":"exact"},{"name":"up regulation of violaceol I biosynthesis","type":"exact"},{"name":"up regulation of violaceol I biosynthetic process","type":"exact"},{"name":"up regulation of violaceol I formation","type":"exact"},{"name":"up regulation of violaceol I synthesis","type":"exact"},{"name":"up-regulation of violaceol I anabolism","type":"exact"},{"name":"up-regulation of violaceol I biosynthesis","type":"exact"},{"name":"up-regulation of violaceol I biosynthetic process","type":"exact"},{"name":"up-regulation of violaceol I formation","type":"exact"},{"name":"up-regulation of violaceol I synthesis","type":"exact"},{"name":"upregulation of violaceol I anabolism","type":"exact"},{"name":"upregulation of violaceol I biosynthesis","type":"exact"},{"name":"upregulation of violaceol I biosynthetic process","type":"exact"},{"name":"upregulation of violaceol I formation","type":"exact"},{"name":"upregulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900715"}


id: PBO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1 like","termid":"PBO:0050847"}


id: PBO:0030144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_L-thialysine","termid":"PBO:0030144"}


id: PBO:0089237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase Mdh1","termid":"PBO:0089237"}


id: GO:1990353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex. In D. melanogaster, it regulates ubiquitination and proteolysis of the BMP receptor Thickveins in cystoblasts, potentially by controlling Tkv ubiquitination and degradation.","definition_xrefs":["GOC:bhm","PMID:21145463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Fused-Smurf ubiquitin ligase complex","termid":"GO:1990353"}


id: MONDO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative spinal disease that can involve any part of the vertebra, the intervertebral disk, and the surrounding soft tissue.","definition_xrefs":["MESH:D055009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of bone structure","termid":"MONDO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis","secondary_identifiers":["ICD10CM:M47","SCTID:48210000","ICD9:721.9","ICD9:721.3","MEDGEN:21295","UMLS:C0038019","SCTID:8847002","DOID:2247"],"synonyms":[{"name":"lumbar spondylosis with myelopathy","type":"exact"},{"name":"lumbosacral spondylosis without myelopathy","type":"exact"},{"name":"spondylogenic compression of lumbar spinal cord","type":"exact"},{"name":"spondylogenic compression of thoracic spinal cord","type":"exact"},{"name":"spondylosis with myelopathy","type":"exact"},{"name":"thoracic or lumbar spondylosis with myelopathy","type":"exact"}],"termid":"MONDO:0002253","xrefs":{"Monarch":{"xref_id":"0002253"}}}


id: PBO:0044309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 4","termid":"PBO:0044309"}


id: PBO:0057288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 508","termid":"PBO:0057288"}


id: MONDO:0014417
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86651,86652],"is_not":false,"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 38 (SCA38) is a subtype of autosomal dominant cerebellar ataxia type 3 characterized by the adult-onset (average age: 40 years) of truncal ataxia, gait disturbance and gaze-evoked nystagmus. The disease is slowly progressive with dysarthria and limb ataxia following. Additional manifestations include diplopia and axonal neuropathy.","definition_xrefs":["Orphanet:423296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002525","MONDO:0002039","MONDO:0005066"],"is_obsolete":false,"name":"spinocerebellar ataxia type 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615957","DOID:0050985","MEDGEN:1379865","GARD:12369","SCTID:734021001","UMLS:C4518337"],"synonyms":[{"name":"SCA38","type":"exact"},{"name":"spinocerebellar ataxia 38","type":"related"},{"name":"spinocerebellar ataxia type 38","type":"exact"}],"termid":"MONDO:0014417","terms_by_termid":{"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0014417"}}}


id: MOD:00176
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(phosphoribosyl dephospho-coenzyme A)-L-serine.","definition_xrefs":["PubMed:180526","PubMed:11052675","RESID:AA0167","Unimod:395#S","PubMed:179809","PubMed:10924139","PubMed:368065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","synonyms":[{"name":"MOD_RES O-(phosphoribosyl dephospho-coenzyme A)serine","type":"exact"},{"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-(phosphate-5-ribosyl-alpha-2-adenosine-5-diphosphate pantetheine)-L-serine","type":"exact"},{"name":"O3-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-2'-(5''-phosphoribosyl-3'-dephosphocoenzyme A)-L-serine","type":"exact"},{"name":"OPRibdPCoASer","type":"exact"},{"name":"PhosphoribosyldephosphoCoA","type":"related"},{"name":"phosphoribosyl dephospho-coenzyme A","type":"related"}],"termid":"MOD:00176"}


id: MONDO:0013191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the INF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 5","secondary_identifiers":["GARD:15636","MEDGEN:413315","DOID:0111130","MESH:C567687","OMIM:613237","UMLS:C2750475"],"synonyms":[{"name":"FSGS5","type":"exact"},{"name":"INF2 focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 5","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in INF2","type":"exact"},{"name":"focal segmental glomerulosclerosis type 5","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 5","type":"related"}],"termid":"MONDO:0013191","xrefs":{"Monarch":{"xref_id":"0013191"}}}


id: MOD:01476
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an 2'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-fluoro-L-phenylalanine","synonyms":[{"name":"2-fluorophenylalanine","type":"exact"},{"name":"o-fluorophenylalanine","type":"exact"},{"name":"ortho-fluorophenylalanine","type":"exact"}],"termid":"MOD:01476"}


id: MONDO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"eyelid degenerative disorder","secondary_identifiers":["ICD9:374.50","SCTID:1112003","UMLS:C0155209","DOID:10120","MEDGEN:509851"],"synonyms":[{"name":"eyelid neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyelid","type":"exact"}],"termid":"MONDO:0000941","xrefs":{"Monarch":{"xref_id":"0000941"}}}


id: GO:0051461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of corticotropin hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of corticotropin secretion","termid":"GO:0051459"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"corticotropin secretion","termid":"GO:0051458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of corticotropin secretion","synonyms":[{"name":"activation of adrenocorticotropin secretion","type":"narrow"},{"name":"positive regulation of ACTH secretion","type":"exact"},{"name":"positive regulation of adrenocorticotropic hormone secretion","type":"exact"},{"name":"positive regulation of adrenocorticotropin secretion","type":"exact"},{"name":"positive regulation of adrenotropic hormone secretion","type":"exact"},{"name":"positive regulation of adrenotropin secretion","type":"exact"},{"name":"positive regulation of corticotropic hormone secretion","type":"exact"},{"name":"stimulation of adrenocorticotropin secretion","type":"narrow"},{"name":"up regulation of adrenocorticotropin secretion","type":"exact"},{"name":"up-regulation of adrenocorticotropin secretion","type":"exact"},{"name":"upregulation of adrenocorticotropin secretion","type":"exact"}],"termid":"GO:0051461"}


id: GO:1902141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16496115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to inositol","termid":"GO:1902140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to inositol","termid":"GO:1902141"}


id: GO:0050607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formaldehyde + mycothiol + NAD+ = S-formylmycothiol + NADH + H+.","definition_xrefs":["EC:1.1.1.306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mycothiol-dependent formaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.66-RXN","RHEA:28502"],"synonyms":[{"name":"NAD/factor-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"formaldehyde:NAD+ oxidoreductase (mycothiol-formylating)","type":"exact"}],"termid":"GO:0050607"}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: PBO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin","termid":"PBO:0042930"}


id: SO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that exists (or existed) in nature.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"natural","termid":"SO:0000782"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"extrachromosomal_mobile_genetic_element","termid":"SO:0001038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural_transposable_element","synonyms":[{"name":"natural transposable element","type":"exact"}],"termid":"SO:0000797"}


id: PBO:0047076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member E, pseudogene","termid":"PBO:0047076"}


id: MONDO:0060641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without seizures and gait abnormalities","secondary_identifiers":["UMLS:C4693391","OMIM:617864","MEDGEN:1645968"],"synonyms":[{"name":"NEDSGA","type":"related"},{"name":"neurodevelopmental disorder with or without seizures and gait abnormalities","type":"exact"}],"termid":"MONDO:0060641","xrefs":{"Monarch":{"xref_id":"0060641"}}}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: PBO:0047234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member F","termid":"PBO:0047234"}


id: GO:0140624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein catabolic pathway which selectively extracts ER-resident membrane proteins exported to the Golgi and endosomes for degradation by cytosolic proteasomes. It begins with phosphorylation of the ER-resident membrane protein, which triggers export of the protein from the ER to the Golgi and endosomes, followed by polyubiquitination by the Dsc E3 ubiquitin ligase complex and extraction of the ubiquitinated target, and ends with proteasomal degradation.","definition_xrefs":["PMID:31368600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"EGAD pathway","termid":"GO:0140624"}


id: PBO:0068645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 26, pseudogene","termid":"PBO:0068645"}


id: PBO:0053543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 548","termid":"PBO:0053543"}


id: PBO:0004247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reiske ISP-associated protein, ubiquinol-cytochrome-c reductase complex subunit Qcr10 (predicted)","termid":"PBO:0004247"}


id: GO:1900832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-leucine.","definition_xrefs":["GOC:TermGenie","PMID:10918062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-leucine metabolic process","termid":"GO:1900831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-leucine catabolic process","synonyms":[{"name":"D-leucine breakdown","type":"exact"},{"name":"D-leucine catabolism","type":"exact"},{"name":"D-leucine degradation","type":"exact"}],"termid":"GO:1900832"}


id: PBO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase","termid":"PBO:0042805"}


id: PBO:0046010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 5","termid":"PBO:0046010"}


id: PBO:0054886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2300","termid":"PBO:0054886"}


id: PBO:0040869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMF antisense RNA 1","termid":"PBO:0040869"}


id: GO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18037263","PMID:19801898","PMID:11805081","PMID:29571981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"symbiont-mediated activation of host programmed cell death","termid":"GO:0052042"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host apoptosis","secondary_identifiers":["GO:0033669","GO:0060139","GO:0039651","GO:0052030"],"synonyms":[{"name":"activation by organism of host apoptosis","type":"exact"},{"name":"activation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"activation by symbiont of host apoptosis","type":"narrow"},{"name":"induction by organism of host apoptotic programmed cell death","type":"exact"},{"name":"induction by symbiont of host apoptosis","type":"exact"},{"name":"positive regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"positive regulation by symbiont of host apoptosis","type":"narrow"},{"name":"positive regulation by symbiont of host apoptotic process","type":"exact"},{"name":"positive regulation by virus of host apoptosis","type":"narrow"},{"name":"stimulation by symbiont of host apoptosis","type":"narrow"},{"name":"up regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up regulation by symbiont of host apoptosis","type":"exact"},{"name":"up-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up-regulation by symbiont of host apoptosis","type":"exact"},{"name":"upregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"upregulation by symbiont of host apoptosis","type":"exact"}],"termid":"GO:0052151"}


id: GO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrate","termid":"GO:0010167"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to reactive nitrogen species","termid":"GO:1902170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrate","termid":"GO:0071249"}


id: PBO:0003661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/EH/EF hand domain protein Ucp8","termid":"PBO:0003661"}


id: PBO:0054195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1570","termid":"PBO:0054195"}


id: GO:2000868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrone secretion","termid":"GO:2000867"},{"relation_name":"negatively_regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrone secretion","synonyms":[{"name":"negative regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"negative regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000868"}


id: GO:0106003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in modulation of signaling and synaptic function in the brain, predominantly in the cerebral cortex and hippocampus. Forms dimers and multimers of amyloid beta peptide 40 and peptide 42 (proteolytic cleavage products of amyloid beta A4 protein, also known as amyloid beta precursor protein). Mostly found in the extracellular space with a proportion occurring as membrane-bound species. Influences synaptic plasticity through various receptors, mediates dendritic spine loss leading to decreased synapse density, inhibits long-term potentiation (LTP) and enhances long-term depression (LTD). Soluble multimeric form is the main pathogenic species linked to Alzheimer's disease.","definition_xrefs":["PMID:18568035","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"amyloid-beta complex","synonyms":[{"name":"ADDL complex","type":"narrow"},{"name":"Abeta complex","type":"exact"},{"name":"Abeta-derived diffusible ligand complex","type":"narrow"},{"name":"amyloid beta complex","type":"exact"},{"name":"amyloid beta dimer","type":"narrow"},{"name":"amyloid beta heterodimer","type":"narrow"},{"name":"amyloid beta heterooligomer","type":"narrow"},{"name":"amyloid beta heterotrimer","type":"narrow"},{"name":"amyloid beta homodimer","type":"narrow"},{"name":"amyloid beta homooligomer","type":"narrow"},{"name":"amyloid beta homotrimer","type":"narrow"},{"name":"amyloid beta oligomer","type":"narrow"},{"name":"amyloid beta trimer","type":"narrow"},{"name":"amyloid-beta protein 40 complex","type":"narrow"},{"name":"amyloid-beta protein 40/42 complex","type":"narrow"},{"name":"amyloid-beta protein 42 complex","type":"narrow"},{"name":"beta amyloid complex","type":"exact"},{"name":"beta-amyloid complex","type":"exact"},{"name":"betaA complex","type":"exact"},{"name":"heterodimer of amyloid beta protein","type":"narrow"},{"name":"heterooligomer of amyloid beta protein","type":"narrow"},{"name":"heterotrimer of amyloid beta protein","type":"narrow"},{"name":"homodimer of amyloid beta protein","type":"narrow"},{"name":"homooligomer of amyloid beta protein","type":"narrow"},{"name":"homotrimer of amyloid beta protein","type":"narrow"}],"termid":"GO:0106003"}


id: MONDO:0011233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Axenfeld-Rieger syndrome in which the cause of the disease is a mutation in the FOXC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Axenfeld-Rieger syndrome","termid":"MONDO:0019187"},{"relation_name":"is_a","term_name":"FOXC1-related anterior segment dysgenesis","termid":"MONDO:0100235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Axenfeld-Rieger syndrome type 3","secondary_identifiers":["OMIM:602482","DOID:0110122","GARD:9626","ICD9:743.44","SCTID:22155002","UMLS:C2678503","MEDGEN:394534"],"synonyms":[{"name":"Axenfeld anomaly","type":"related"},{"name":"Axenfeld-Rieger anomaly","type":"related"},{"name":"Axenfeld-Rieger anomaly with Cardiac defects and/Or sensorineural hearing loss","type":"related"},{"name":"Axenfeld-Rieger anomaly with or without Cardiac defects and/or sensorineural hearing loss","type":"related"},{"name":"Axenfeld-Rieger anomaly with or without cardiac defects and/or sensorineural hearing loss","type":"exact"},{"name":"Axenfeld-Rieger syndrome caused by mutation in FOXC1","type":"exact"},{"name":"Axenfeld-Rieger syndrome type 3","type":"exact"},{"name":"Axenfeld-Rieger syndrome, type 3","type":"related"},{"name":"FOXC1 Axenfeld-Rieger syndrome","type":"exact"},{"name":"RIEG3","type":"exact"},{"name":"Rieger anomaly","type":"related"},{"name":"Rieger syndrome type 3","type":"exact"},{"name":"Rieger syndrome, type 3","type":"related"},{"name":"anterior chamber Cleavage syndrome","type":"related"},{"name":"anterior chamber cleavage syndrome","type":"exact"},{"name":"anterior segment mesenchymal dysgenesis","type":"related"}],"termid":"MONDO:0011233","xrefs":{"Monarch":{"xref_id":"0011233"}}}


id: PBO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 5","termid":"PBO:0072222"}


id: GO:0009449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid metabolic process","termid":"GO:0009448"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gamma-aminobutyric acid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-888568"],"synonyms":[{"name":"4-aminobutanoate biosynthesis","type":"exact"},{"name":"4-aminobutanoate biosynthetic process","type":"exact"},{"name":"4-aminobutyrate biosynthesis","type":"exact"},{"name":"4-aminobutyrate biosynthetic process","type":"exact"},{"name":"GABA biosynthesis","type":"exact"},{"name":"GABA biosynthetic process","type":"exact"},{"name":"gamma-aminobutyric acid anabolism","type":"exact"},{"name":"gamma-aminobutyric acid biosynthesis","type":"exact"},{"name":"gamma-aminobutyric acid formation","type":"exact"},{"name":"gamma-aminobutyric acid synthesis","type":"exact"}],"termid":"GO:0009449"}


id: GO:0097640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-ornithine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-ornithine import across plasma membrane","secondary_identifiers":["GO:1903411"],"synonyms":[{"name":"L-ornithine import into cell","type":"exact"}],"termid":"GO:0097640"}


id: PBO:0042741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein P","termid":"PBO:0042741"}


id: PBO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 41","termid":"PBO:0044354"}


id: PBO:0079874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 1","termid":"PBO:0079874"}


id: PBO:0064737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 73","termid":"PBO:0064737"}


id: GO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of any organ involved in hematopoiesis (also known as hemopoiesis) or lymphoid cell activation over time, from its formation to the mature structure. Such development includes differentiation of resident cell types (stromal cells) and of migratory cell types dependent on the unique microenvironment afforded by the organ for their proper differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic or lymphoid organ development","synonyms":[{"name":"haematopoietic or lymphoid organ development","type":"exact"},{"name":"haemopoietic or lymphoid organ development","type":"exact"},{"name":"hemopoietic or lymphoid organ development","type":"exact"}],"termid":"GO:0048534"}


id: GO:0034077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["ISBN:0911910123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butanediol metabolic process","synonyms":[{"name":"butanediol metabolism","type":"exact"},{"name":"butylene glycol metabolic process","type":"exact"},{"name":"butylene glycol metabolism","type":"exact"}],"termid":"GO:0034077"}


id: GO:1904087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epiboly involved in gastrulation with mouth forming second.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epiboly involved in gastrulation with mouth forming second","termid":"GO:1904086"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epiboly involved in gastrulation with mouth forming second","synonyms":[{"name":"down regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"down-regulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"downregulation of epiboly involved in gastrulation with mouth forming second","type":"exact"},{"name":"inhibition of epiboly involved in gastrulation with mouth forming second","type":"narrow"}],"termid":"GO:1904087"}


id: PBO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 2","termid":"PBO:0075250"}


id: PR:G2TRL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.20 gene.","definition_xrefs":["UniProtKB:G2TRL8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CUNK4.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.20","synonyms":[{"name":"Spom972h-SPACUNK4.20","type":"exact"}],"termid":"PR:G2TRL8"}


id: FYPO:0000656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is abnormal, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding phenotype","termid":"FYPO:0000653"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA binding","termid":"FYPO:0000656"}


id: PBO:0053014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 1","termid":"PBO:0053014"}


id: PBO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.6","termid":"PBO:0000240"}


id: PBO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBB receptor feedback inhibitor 1","termid":"PBO:0046532"}


id: GO:1902648
data:
  {"annotated_genes":["SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117924],"is_not":false,"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process.","definition_xrefs":["PMID:22562153","GOC:di","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010513"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","termid":"GO:1902646"},{"relation_name":"positively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","termid":"GO:1902635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"narrow"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:1902648","terms_by_termid":{"GO:1902648":null}}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: FYPO:0004480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased during a cellular response to micafungin.","definition_xrefs":["PMID:16928959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to micafungin","synonyms":[{"name":"decreased transcription from CDRE promoter during cellular response to micafungin","type":"exact"},{"name":"decreased transcription from CDRE promoter in response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to micafungin during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to micafungin","type":"exact"}],"termid":"FYPO:0004480"}


id: PBO:0057219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378g","termid":"PBO:0057219"}


id: GO:0031649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism produces heat, thereby raising its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat generation","termid":"GO:0031649"}


id: MONDO:0011040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, Anhalt type","secondary_identifiers":["OMIM:601344","MEDGEN:318632","UMLS:C1832464","MESH:C563348"],"synonyms":[{"name":"spinal dysplasia, Anhalt type","type":"exact"}],"termid":"MONDO:0011040","xrefs":{"Monarch":{"xref_id":"0011040"}}}


id: MONDO:0015810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous T-cell lymphoma","termid":"MONDO:0015816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous CD4+ small/medium-sized pleomorphic T-cell lymphoma","secondary_identifiers":["UMLS:C5680503","ICD10CM:C84.4","Orphanet:178522","GARD:20156","MEDGEN:1842165"],"termid":"MONDO:0015810","xrefs":{"Monarch":{"xref_id":"0015810"}}}


id: MONDO:0009242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brittle cornea syndrome is a form of Ehlers-Danlos syndrome characterized by a severe ocular manifestations due to extreme corneal thinning and fragility with rupture in the absence of significant trauma, and progression to blindness. Extraocular manifestations comprise deafness, developmental hip dysplasia, and joint hypermobility.","definition_xrefs":["Orphanet:90354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"brittle cornea syndrome","secondary_identifiers":["GARD:1019","MESH:C536198","OMIMPS:229200","SCTID:719096006","DOID:14775"],"synonyms":[{"name":"BCS1","type":"related"},{"name":"EDS VIB (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6B (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6b","type":"related"},{"name":"brittle cornea syndrome","type":"exact"},{"name":"brittle cornea syndrome 1","type":"related"},{"name":"brittle cornea syndrome 2","type":"narrow"},{"name":"brittle cornea syndrome type 1","type":"exact"},{"name":"kyphoscoliosis type","type":"exact"},{"name":"type VIB Ehlers-Danlos syndrome","type":"exact"}],"termid":"MONDO:0009242","xrefs":{"Monarch":{"xref_id":"0009242"}}}


id: MONDO:0009299
data:
  {"annotated_genes":["SJAG_04950","SJAG_03051","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","definition":"46,XX gonadal dysgenesis (46,XX GD) is a primary ovarian defect leading to premature ovarian failure (POF) in otherwise normal 46,XX females as a result of failure of the gonads to develop or due to resistance to gonadotrophin stimulation.","definition_xrefs":["Orphanet:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03051":null,"SJAG_04148":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"46 XX gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:14450","icd11.foundation:1742528605","UMLS:C0685837","OMIMPS:233300","MEDGEN:146899","NCIT:C120197","SCTID:95198001","GARD:5671","NANDO:2200384","MESH:D023961"],"synonyms":[{"name":"46,XX complete gonadal dysgenesis","type":"exact"},{"name":"46,XX gonadal dysgenesis","type":"exact"},{"name":"46,XX ovarian dysgenesis","type":"exact"},{"name":"46,XX pure gonadal dysgenesis","type":"exact"},{"name":"FSH-RO","type":"exact"},{"name":"XX female gonadal dysgenesis","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XX-GD","type":"exact"},{"name":"follicular stimulating hormone-resistant ovaries","type":"exact"},{"name":"hypergonadotropic ovarian dysgenesis","type":"exact"},{"name":"ovarian dysgenesis","type":"related"}],"termid":"MONDO:0009299","terms_by_termid":{"MONDO:0013689":null,"MONDO:0030736":null,"MONDO:0054850":null},"xrefs":{"Monarch":{"xref_id":"0009299"}}}


id: PBO:0076497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonyl-tRNA synthetase 3","termid":"PBO:0076497"}


id: PBO:0074351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 1A","termid":"PBO:0074351"}


id: GO:0044073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism effects a change in translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host translation (obsolete GO:0044073)","synonyms":[{"name":"modification by symbiont of host translation","type":"exact"},{"name":"modulation of host translation by symbiont","type":"exact"},{"name":"regulation by symbiont of host translation","type":"exact"}],"termid":"GO:0044073"}


id: PBO:0047477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 4","termid":"PBO:0047477"}


id: GO:0075278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of telium development","termid":"GO:0075276"},{"relation_name":"negatively_regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of telium development","termid":"GO:0075278"}


id: MONDO:0013551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 47","secondary_identifiers":["NORD:1993","NCIT:C164224","UMLS:C3279738","GARD:15749","OMIM:614066","DOID:0110799","MEDGEN:481368"],"synonyms":[{"name":"AP4B1 hereditary spastic paraplegia","type":"exact"},{"name":"CPSQ5","type":"exact"},{"name":"SPG47","type":"exact"},{"name":"Spastic Paraplegia 47","type":"exact"},{"name":"autosomal recessive spastic paraplegia 47","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 5","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 5, formerly","type":"related"},{"name":"hereditary spastic paraplegia 47","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in AP4B1","type":"exact"},{"name":"hereditary spastic paraplegia type 47","type":"exact"},{"name":"spastic paraplegia 47, autosomal recessive","type":"related"},{"name":"spastic quadriplegic cerebral palsy 5","type":"exact"}],"termid":"MONDO:0013551","xrefs":{"Monarch":{"xref_id":"0013551"}}}


id: FYPO:0005599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of meiosis I","synonyms":[{"name":"delayed meiosis I progression","type":"related"},{"name":"increased duration of first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiosis I progression","type":"exact"},{"name":"prolonged meiosis I","type":"exact"}],"termid":"FYPO:0005599"}


id: GO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["LIGAND:C03367","PubChem_Compound:439991","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"6-alpha-maltosylglucose metabolic process","synonyms":[{"name":"6-alpha-maltosylglucose metabolism","type":"exact"},{"name":"isopanose metabolic process","type":"exact"},{"name":"isopanose metabolism","type":"exact"}],"termid":"GO:0051679"}


id: MOD:00594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 113.047678 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"}


id: PBO:0055577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3013","termid":"PBO:0055577"}


id: PBO:0114486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs","termid":"PBO:0114486"}


id: MONDO:0006771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tongue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossitis","secondary_identifiers":["EFO:1000951","ICD9:529.0","MESH:D005928","MedDRA:10018386","ICD10CM:K14.0","DOID:1456","icd11.foundation:843084384","SCTID:45534005","MEDGEN:6618","UMLS:C0017675"],"synonyms":[{"name":"inflammation of tongue","type":"exact"},{"name":"tongue inflammation","type":"exact"}],"termid":"MONDO:0006771","xrefs":{"Monarch":{"xref_id":"0006771"}}}


id: FYPO:0000580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"},{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ascospore wall biogenesis","synonyms":[{"name":"abnormal ascospore wall organization","type":"related"},{"name":"abnormal spore wall formation","type":"related"},{"name":"abnormal spore wall organization","type":"related"},{"name":"spore wall formation: abnormal","type":"related"}],"termid":"FYPO:0000580"}


id: PBO:0041550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 63","termid":"PBO:0041550"}


id: PBO:0041571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 202","termid":"PBO:0041571"}


id: GO:1900668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of endocrocin biosynthetic process","termid":"GO:1900667"},{"relation_name":"negatively_regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of endocrocin biosynthetic process","synonyms":[{"name":"down regulation of endocrocin anabolism","type":"exact"},{"name":"down regulation of endocrocin biosynthesis","type":"exact"},{"name":"down regulation of endocrocin biosynthetic process","type":"exact"},{"name":"down regulation of endocrocin formation","type":"exact"},{"name":"down regulation of endocrocin synthesis","type":"exact"},{"name":"down-regulation of endocrocin anabolism","type":"exact"},{"name":"down-regulation of endocrocin biosynthesis","type":"exact"},{"name":"down-regulation of endocrocin biosynthetic process","type":"exact"},{"name":"down-regulation of endocrocin formation","type":"exact"},{"name":"down-regulation of endocrocin synthesis","type":"exact"},{"name":"downregulation of endocrocin anabolism","type":"exact"},{"name":"downregulation of endocrocin biosynthesis","type":"exact"},{"name":"downregulation of endocrocin biosynthetic process","type":"exact"},{"name":"downregulation of endocrocin formation","type":"exact"},{"name":"downregulation of endocrocin synthesis","type":"exact"},{"name":"inhibition of endocrocin anabolism","type":"exact"},{"name":"inhibition of endocrocin biosynthesis","type":"exact"},{"name":"inhibition of endocrocin biosynthetic process","type":"narrow"},{"name":"inhibition of endocrocin formation","type":"exact"},{"name":"inhibition of endocrocin synthesis","type":"exact"},{"name":"negative regulation of endocrocin anabolism","type":"exact"},{"name":"negative regulation of endocrocin biosynthesis","type":"exact"},{"name":"negative regulation of endocrocin formation","type":"exact"},{"name":"negative regulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900668"}


id: PBO:0058942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 1","termid":"PBO:0058942"}


id: PBO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl ester lipase pseudogene","termid":"PBO:0042708"}


id: PBO:0076247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUV39H2 histone lysine methyltransferase","termid":"PBO:0076247"}


id: GO:0008322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond to release a C-terminal amino acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X carboxypeptidase activity (obsolete GO:0008322)","synonyms":[{"name":"Pro-X carboxypeptidase activity","type":"exact"}],"termid":"GO:0008322"}


id: PBO:0075917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 9","termid":"PBO:0075917"}


id: PBO:0041112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binder of sperm protein homolog 1","termid":"PBO:0041112"}


id: GO:0043968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A acetylation (obsolete GO:0043968)","termid":"GO:0043968"}


id: PBO:0034032
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_message_for_curators","termid":"PBO:0034032"}


id: PBO:0054443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1840","termid":"PBO:0054443"}


id: GO:0006627
data:
  {"annotated_genes":["SJAG_02809","SJAG_04533","SJAG_01004","SJAG_04641","SJAG_03648","SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70253,77211,78569,80336,80567,102568],"is_not":false,"summary":null,"term":"GO:0006627"}]},"cv_name":"biological_process","definition":"The cleavage of peptide bonds in proteins, usually near the N terminus, contributing to the process of import into the mitochondrion. Several different peptidases mediate cleavage of proteins destined for different mitochondrial compartments.","definition_xrefs":["PMID:12191769","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein processing","termid":"GO:0034982"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01004":null,"SJAG_02397":null,"SJAG_02809":null,"SJAG_03648":null,"SJAG_04533":null,"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"protein processing involved in protein targeting to mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial processing","type":"broad"},{"name":"mitochondrial protein processing during import","type":"related"}],"termid":"GO:0006627","terms_by_termid":{"GO:0006627":null}}


id: GO:1990741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the non-selective, energy-independent passage of cations across a lipid bilayer down a concentration gradient.","definition_xrefs":["Wikipedia:Ion_channel#Classification_by_type_of_ions","GOC:pr","ISBN:0878937420"],"gene_count":0,"genotype_count":0,"name":"obsolete non-selective cation channel activity (obsolete GO:1990741)","synonyms":[{"name":"nonselective cation channel activity","type":"exact"}],"termid":"GO:1990741"}


id: PBO:0068789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 26, pseudogene","termid":"PBO:0068789"}


id: GO:0047278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin-glucuronoside = bilirubin + bilirubin-bisglucuronoside.","definition_xrefs":["RHEA:16885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"bilirubin-glucuronoside glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00062"],"synonyms":[{"name":"bilirubin glucuronoside glucuronosyltransferase activity","type":"exact"},{"name":"bilirubin monoglucuronide transglucuronidase activity","type":"exact"},{"name":"bilirubin-glucuronoside:bilirubin-glucuronoside D-glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0047278"}


id: GO:0071511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity involved in conjugation with cellular fusion (obsolete GO:0071511)","synonyms":[{"name":"conjugation with cellular fusion, inactivation of MAPK activity","type":"exact"},{"name":"conjugation with cellular fusion, termination of MAPK activity","type":"exact"},{"name":"inactivation of MAPK activity involved in mating response","type":"related"},{"name":"termination of MAPK activity during conjugation with cellular fusion","type":"exact"}],"termid":"GO:0071511"}


id: MONDO:0022676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract - glaucoma (obsolete MONDO:0022676)","termid":"MONDO:0022676","xrefs":{"Monarch":{"xref_id":"0022676"}}}


id: PBO:0110230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1/2 complex WD repeat protein Wat1/Lst8","termid":"PBO:0110230"}


id: FYPO:0004493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division to produce daughter cells that are smaller than normal, which then die.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh","PMID:8367300"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, small cell","synonyms":[{"name":"inviable after spore germination, single cell division, decreased cell size","type":"exact"},{"name":"inviable after spore germination, single cell division, reduced cell size","type":"exact"},{"name":"inviable following spore germination, single cell division, small cell","type":"exact"},{"name":"inviable germinated spore, single cell division, small cell","type":"exact"},{"name":"lethal after spore germination, single cell division, small cell","type":"exact"}],"termid":"FYPO:0004493"}


id: PBO:0061127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin B","termid":"PBO:0061127"}


id: PBO:0058647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6776","termid":"PBO:0058647"}


id: PBO:0085391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane metalloid/H+ antiporter; member of bile/arsenite/riboflavin transporter (BART) superfamily; transports arsenite and antimonite; required for resistance to arsenic compounds; transcription is activated by Arr1p in the presence of arsenite; protein displays 10 transmembrane segments with cytoplasmically oriented N- and C-terminal domains","termid":"PBO:0085391"}


id: GO:0015829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of valine, 2-amino-3-methylbutanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"valine transport","synonyms":[{"name":"L-valine transport","type":"narrow"}],"termid":"GO:0015829"}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: MONDO:0015985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Bone dysplasia Azouz type is a form of generalized enchondromatosis with involvement of the spine (so called spondyloenchondromatosis). Spondyloenchondromatosis is a very rare skeletal dysplasia characterized by severe platyspondyly, and mild involvement of hands and feet.","definition_xrefs":["Orphanet:1844"],"gene_count":0,"genotype_count":0,"name":"obsolete bone dysplasia, Azouz type (obsolete MONDO:0015985)","secondary_identifiers":["SCTID:720566004","GARD:920","icd11.foundation:2054115498"],"synonyms":[{"name":"bone dysplasia Azouz type","type":"related"}],"termid":"MONDO:0015985","xrefs":{"Monarch":{"xref_id":"0015985"}}}


id: PBO:0055961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 74B","termid":"PBO:0055961"}


id: MONDO:0012587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 7","secondary_identifiers":["UMLS:C1970439","MEDGEN:370258","OMIM:610948"],"synonyms":[{"name":"Hyt7","type":"related"},{"name":"hypertension, essential, susceptibility to, 7","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 7","type":"exact"}],"termid":"MONDO:0012587","xrefs":{"Monarch":{"xref_id":"0012587"}}}


id: PBO:0086042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; green fluorescent protein (GFP)-fusion localizes to the ER; null mutant displays increased levels of spontaneous Rad52p foci; IRC23 has a paralog, BSC2, that arose from the whole genome duplication","termid":"PBO:0086042"}


id: SO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 3 modification where the modification is the acetylation of the residue.","definition_xrefs":["SO:ke","EBI:nj","ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_3_acetylation_site","synonyms":[{"name":"H3ac","type":"exact"},{"name":"histone 3 acetylation site","type":"exact"}],"termid":"SO:0001973"}


id: PBO:0091967
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cut Eight suppressing Kinase","termid":"PBO:0091967"}


id: MONDO:0005353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The excessive use of marijuana with associated psychological symptoms and impairment in social or occupational functioning.","definition_xrefs":["EFO:0004218"],"gene_count":0,"genotype_count":0,"name":"obsolete marijuana dependence (obsolete MONDO:0005353)","termid":"MONDO:0005353","xrefs":{"Monarch":{"xref_id":"0005353"}}}


id: PBO:0057935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3661","termid":"PBO:0057935"}


id: GO:0051030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA, small nuclear ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"snRNA transport","termid":"GO:0051030"}


id: MONDO:1012111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, horse","secondary_identifiers":["OMIA:000519-9796"],"termid":"MONDO:1012111","xrefs":{"Monarch":{"xref_id":"1012111"}}}


id: PR:Q9C108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1E7.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1E7.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.01c","synonyms":[{"name":"Spom972h-SPAPB1E7.01c","type":"exact"}],"termid":"PR:Q9C108"}


id: PBO:0077246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 6","termid":"PBO:0077246"}


id: PBO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAB1 pseudogene 1","termid":"PBO:0060426"}


id: PBO:0077172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 1","termid":"PBO:0077172"}


id: FYPO:0009114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle remains monopolar when formed, with microtubules emanating from only one pole, for longer than wild-type, but eventually reaches bipolarity.","definition_xrefs":["PMID:25057016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar mitotic spindle","termid":"FYPO:0000276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000120","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0000631","FYPO:0002399","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"transient monopolar mitotic spindle","synonyms":[{"name":"monopolar mitotic spindle that eventually reaches bipolarity","type":"exact"},{"name":"temporary monopolar mitotic spindle","type":"exact"}],"termid":"FYPO:0009114"}


id: GO:0098699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a presynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of presynapse","termid":"GO:0099181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of presynaptic actin cytoskeleton","termid":"GO:0098699"}


id: MONDO:0011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T-box 24 (obsolete MONDO:0011763)","secondary_identifiers":["OMIM:607044"],"termid":"MONDO:0011763","xrefs":{"Monarch":{"xref_id":"0011763"}}}


id: GO:0015883
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The directed movement of flavin-adenine dinucleotide (FAD) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"FAD transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"flavin adenine dinucleotide transport","type":"exact"},{"name":"flavin-adenine dinucleotide transport","type":"exact"}],"termid":"GO:0015883","terms_by_termid":{"GO:1990548":null}}


id: MONDO:0017716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of carnitine cycle and carnitine transport","secondary_identifiers":["UMLS:C5681080","icd11.foundation:890605309","Orphanet:309130","MEDGEN:1842227","GARD:21320","NANDO:1200969"],"termid":"MONDO:0017716","xrefs":{"Monarch":{"xref_id":"0017716"}}}


id: PBO:0042802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine phosphotransferase 1","termid":"PBO:0042802"}


id: PBO:0074803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13H","termid":"PBO:0074803"}


id: PBO:0047266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member A","termid":"PBO:0047266"}


id: PBO:0058501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-1","termid":"PBO:0058501"}


id: PBO:0065431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 4","termid":"PBO:0065431"}


id: PBO:0034644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_upon_nitrogen_starvation","termid":"PBO:0034644"}


id: MONDO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Softening and degeneration of the CARTILAGE. Pathological processes involving the chondral tissue (CARTILAGE).","definition_xrefs":["EFO:0005802"],"gene_count":0,"genotype_count":0,"name":"obsolete cartilage disease (obsolete MONDO:0005569)","secondary_identifiers":["SCTID:50927007","MESH:D002357","ICD9:733.99","DOID:1222"],"synonyms":[{"name":"cartilage disorder","type":"exact"},{"name":"cartilage tissue disease","type":"exact"},{"name":"cartilage tissue disease or disorder","type":"exact"},{"name":"chondropathy","type":"exact"},{"name":"disease of cartilage tissue","type":"exact"},{"name":"disease or disorder of cartilage tissue","type":"exact"},{"name":"disorder of cartilage tissue","type":"exact"}],"termid":"MONDO:0005569","xrefs":{"Monarch":{"xref_id":"0005569"}}}


id: GO:0042343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole glucosinolates. Glucosinolates are sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan; indoles are biologically active substances based on 2,3-benzopyrrole, formed during the catabolism of tryptophan.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"indole glucosinolate metabolic process","synonyms":[{"name":"indole glucosinolate metabolism","type":"exact"}],"termid":"GO:0042343"}


id: MONDO:0008711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Goodman syndrome is an extremely rare genetic disorder characterized by marked malformations of the head and face (essentially acrocephaly), abnormalities of the hands and feet (polydactyly, syndactyly, clinodactyly, camptodactyly, ulnar deviation), and congenital heart disease. There have been no further descriptions in the literature since 1979. Goodman syndrome could be a variant of Carpenter syndrome.","definition_xrefs":["Orphanet:65798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalopolysyndactyly","termid":"MONDO:0000078"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Goodman syndrome","secondary_identifiers":["SCTID:720600004","GARD:2549","UMLS:C0265303","MEDGEN:78551","MESH:C537287","OMIM:201020"],"synonyms":[{"name":"ACPS 4","type":"exact"},{"name":"ACPS4","type":"exact"},{"name":"Goodman camptodactyly","type":"related"},{"name":"Goodman syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 4","type":"exact"},{"name":"acrocephalopolysyndactyly type IV","type":"related"}],"termid":"MONDO:0008711","xrefs":{"Monarch":{"xref_id":"0008711"}}}


id: PBO:0044389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily B member 6","termid":"PBO:0044389"}


id: MONDO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hereditary ataxia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary ataxia (obsolete MONDO:0015956)","termid":"MONDO:0015956","xrefs":{"Monarch":{"xref_id":"0015956"}}}


id: PBO:0057793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-2","termid":"PBO:0057793"}


id: GO:1990314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin-like growth factor stimulus.","definition_xrefs":["PMID:20042609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to insulin-like growth factor stimulus","synonyms":[{"name":"cellular response to insulin-like growth factor","type":"exact"}],"termid":"GO:1990314"}


id: PBO:0045951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 7","termid":"PBO:0045951"}


id: PBO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecto-NOX disulfide-thiol exchanger 2","termid":"PBO:0046333"}


id: GO:1990533
data:
  {"annotated_genes":["SJAG_02601","SJAG_04283"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107544,116416],"is_not":false,"summary":null,"term":"GO:1990533"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of one subunit known as Dom34 or Pelota that has similarity to translation termination factor eRF1, and another subunit, Hbs1, that is a GTPase with similarity to translation termination factor eRF3. The Dom34-Hbs1 complex has a role in cotranslational mRNA quality control by promoting ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, facilitating no-go decay and nonstop decay.","definition_xrefs":["PMID:21102444","PMID:20890290","PMID:22503425","GOC:mcc","PMID:21448132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02601":null,"SJAG_04283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dom34-Hbs1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dom34:Hbs1 complex","type":"exact"}],"termid":"GO:1990533","terms_by_termid":{"GO:1990533":null}}


id: PBO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human C9orf64","termid":"PBO:0016057"}


id: PBO:0058491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5685","termid":"PBO:0058491"}


id: GO:1904262
data:
  {"annotated_genes":["SJAG_00824","SJAG_00209","SJAG_00991","SJAG_05346","SJAG_00457","SJAG_01142","SJAG_02765","SJAG_01983","SJAG_03486","SJAG_04910","SJAG_03355","SJAG_02231","SJAG_03974","SJAG_03678","SJAG_01184","SJAG_03799","SJAG_03089","SJAG_00875","SJAG_03501","SJAG_03072","SJAG_00169","SJAG_04249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73958,73979,80302,88373,93690,96456,99234,99934,101816,103376,105505,107520,109649,110054,113547,114364,114966,116519,116875,117434,118433,118625],"is_not":false,"summary":null,"term":"GO:1904262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","PMID:25366275","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of TOR signaling","termid":"GO:0032007"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"negatively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03974":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TORC1 signal transduction","type":"exact"},{"name":"down regulation of TORC1 signaling","type":"exact"},{"name":"down-regulation of TORC1 signal transduction","type":"exact"},{"name":"down-regulation of TORC1 signaling","type":"exact"},{"name":"downregulation of TORC1 signal transduction","type":"exact"},{"name":"downregulation of TORC1 signaling","type":"exact"},{"name":"inhibition of TORC1 signal transduction","type":"narrow"},{"name":"inhibition of TORC1 signaling","type":"narrow"},{"name":"negative regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1904262","terms_by_termid":{"GO:1904262":null}}


id: MONDO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A conventional osteosarcoma characterized by the presence of spindle shaped cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrosarcomatous osteosarcoma","secondary_identifiers":["ICDO:9182/3","NCIT:C4020","MEDGEN:79012","UMLS:C0279602","ONCOTREE:FIOS","DOID:7603"],"synonyms":[{"name":"FIOS","type":"related"},{"name":"fibroblastic osteogenic sarcoma","type":"exact"},{"name":"fibroblastic osteosarcoma","type":"exact"},{"name":"fibroblastic osteosarcoma (morphologic abnormality)","type":"exact"},{"name":"fibrosarcomatous osteogenic sarcoma","type":"exact"},{"name":"fibrosarcomatous osteosarcoma","type":"exact"}],"termid":"MONDO:0004301","xrefs":{"Monarch":{"xref_id":"0004301"}}}


id: GO:0032151
data:
  {"annotated_genes":["SJAG_01277","SJAG_00663","SJAG_04375","SJAG_03374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98254,100478,101321,104282],"is_not":false,"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A heterooligomeric septin complex that acts during mitotic cell division.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin complex","termid":"GO:0031105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_03374":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitotic septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032151","terms_by_termid":{"GO:0032151":null}}


id: GO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"narrow"}],"termid":"GO:0030613"}


id: MONDO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of psammoma bodies that predominate over the meningeal cells.","definition_xrefs":["NCIT:C4331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psammomatous meningioma","secondary_identifiers":["MEDGEN:90815","UMLS:C0334607","DOID:7210","ICDO:9533/0"],"synonyms":[{"name":"psammomatous meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004143","xrefs":{"Monarch":{"xref_id":"0004143"}}}


id: GO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alcohol from one side of a membrane to the other. An alcohol is any carbon compound that contains a hydroxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}


id: MONDO:0010223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recessive X-linked ichthyosis","termid":"MONDO:0010622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"ichthyosis, X-linked, without steroid sulfatase deficiency","secondary_identifiers":["MEDGEN:341213","UMLS:C1848387","OMIM:300001","MESH:C564729","GARD:15250"],"synonyms":[{"name":"ichthyosis, X-linked, without steroid sulfatase deficiency","type":"exact"}],"termid":"MONDO:0010223","xrefs":{"Monarch":{"xref_id":"0010223"}}}


id: MONDO:1010784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyoderma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma, non-human animal","termid":"MONDO:1010142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma, dog","secondary_identifiers":["OMIA:001877-9615"],"termid":"MONDO:1010784","xrefs":{"Monarch":{"xref_id":"1010784"}}}


id: SO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that is segregating in one or more natural populations of a species.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allele","termid":"SO:0001023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_sequence_variant","synonyms":[{"name":"polymorphic sequence variant","type":"exact"}],"termid":"SO:0001025"}


id: GO:0033957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages in the backbone of lambda-carrageenan, resulting in the tetrasaccharide alpha-D-Galp2,6S2-(1->3)-beta-D-Galp2S-(1->4)-alpha-D-Galp2,6S2-(1->3)-D-Galp2S.","definition_xrefs":["EC:3.2.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"lambda-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.162-RXN"],"synonyms":[{"name":"endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase activity","type":"related"}],"termid":"GO:0033957"}


id: PBO:0026681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_maltose_carbon_source","termid":"PBO:0026681"}


id: PBO:0086264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates ubiquitination of Rsp5p; has a WW domain consensus motif of PPPSY (residues 131-135) that mediates binding of Rsp5p to Ubp2p; contains an UBA domain; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086264"}


id: GO:0019592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol catabolic process","termid":"GO:0019407"},{"relation_name":"is_a","term_name":"mannitol metabolic process","termid":"GO:0019594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mannitol catabolic process","synonyms":[{"name":"mannitol breakdown","type":"exact"},{"name":"mannitol catabolism","type":"exact"},{"name":"mannitol degradation","type":"exact"}],"termid":"GO:0019592"}


id: MONDO:0020601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Viral encephalitis that is transmitted by mosquitos.","definition_xrefs":["NCIT:C34823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosquito-borne viral encephalitis","secondary_identifiers":["UMLS:C0751098","MEDGEN:152945"],"synonyms":[{"name":"mosquito-borne viral encephalitis","type":"exact"}],"termid":"MONDO:0020601","xrefs":{"Monarch":{"xref_id":"0020601"}}}


id: PBO:0087948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4E; mRNA cap binding protein and subunit of the mRNA cap-binding complex (eIF4F) along with eIF4A (Tif1p/Tif2p) and eIF4G (Tif4631p/Tif4632p), that mediates cap-dependent translation; required with eIF4G for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; protein abundance increases in response to DNA replication stress; human homolog EIF4E can complement the cdc33 null mutant","termid":"PBO:0087948"}


id: PBO:0059163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercaptopyruvate sulfurtransferase","termid":"PBO:0059163"}


id: PBO:0082695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore-associated Ndc80 complex; conserved coiled-coil protein involved in chromosome segregation, spindle checkpoint activity, and kinetochore assembly and clustering; evolutionarily conserved; complex members include Ndc80p, Nuf2p, Scp24p, and Spc25p; modified by sumoylation","termid":"PBO:0082695"}


id: PBO:0081687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 608","termid":"PBO:0081687"}


id: GO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of octopamine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"octopamine secretion","termid":"GO:0061539"}


id: MONDO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign neoplasm that arises from the Bartholin gland and is characterized by the presence of clustered glands and tubules lined by mucin-secreting epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartholin gland benign neoplasm","termid":"MONDO:0002193"},{"relation_name":"is_a","term_name":"vulvar glandular neoplasm","termid":"MONDO:0002198"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin gland adenoma","secondary_identifiers":["DOID:5382","MEDGEN:267025","UMLS:C1511048","NCIT:C40299"],"synonyms":[{"name":"Bartholin gland adenoma","type":"exact"},{"name":"Bartholin's gland adenoma","type":"exact"},{"name":"major vestibular gland adenoma","type":"exact"}],"termid":"MONDO:0003419","xrefs":{"Monarch":{"xref_id":"0003419"}}}


id: GO:0061058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061058"}


id: PBO:0079683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3D","termid":"PBO:0079683"}


id: PBO:0049134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein pathway suppressor 2","termid":"PBO:0049134"}


id: GO:1905691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a lipid particle into its constituent components.","definition_xrefs":["GOC:pr","GOC:TermGenie","GO_REF:0000079","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet disassembly","synonyms":[{"name":"adiposome disassembly","type":"exact"},{"name":"lipid body disassembly","type":"exact"},{"name":"lipid droplet reserve breakdown","type":"exact"},{"name":"lipid particle disassembly","type":"exact"}],"termid":"GO:1905691"}


id: GO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.","definition_xrefs":["PMID:17572649","GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ossification","secondary_identifiers":["Wikipedia:Ossification"],"synonyms":[{"name":"bone biosynthesis","type":"exact"},{"name":"bone formation","type":"exact"},{"name":"osteogenesis","type":"exact"}],"termid":"GO:0001503"}


id: PBO:0069080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 327, pseudogene","termid":"PBO:0069080"}


id: GO:0003371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration","termid":"GO:0003371"}


id: PBO:0116851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin remodelling factor Iws1","termid":"PBO:0116851"}


id: GO:0060298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of sarcomere organization","termid":"GO:0060297"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of sarcomere organization","synonyms":[{"name":"positive regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060298"}


id: MONDO:0957279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auditory neuropathy, autosomal dominant 2","secondary_identifiers":["UMLS:C5830542","OMIM:620384","MEDGEN:1841178"],"termid":"MONDO:0957279","xrefs":{"Monarch":{"xref_id":"0957279"}}}


id: MONDO:0014064
data:
  {"annotated_genes":["SJAG_03490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85497],"is_not":false,"summary":null,"term":"MONDO:0014064"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the UQCRB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03490":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554606","GARD:15911","DOID:0080112","MEDGEN:767520","OMIM:615158"],"synonyms":[{"name":"MC3DN3","type":"related"},{"name":"UQCRB mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 3","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in UQCRB","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 3","type":"related"}],"termid":"MONDO:0014064","terms_by_termid":{"MONDO:0014064":null},"xrefs":{"Monarch":{"xref_id":"0014064"}}}


id: PBO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human hAGO2","termid":"PBO:0005094"}


id: FYPO:0006401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more 2'-deoxyribonucleoside triphosphates (dNTPs) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular dNTP level","synonyms":[{"name":"decreased cellular dNTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dNTP level during vegetative growth","type":"exact"},{"name":"decreased dNTP accumulation","type":"related"},{"name":"reduced cellular dNTP level","type":"exact"}],"termid":"FYPO:0006401"}


id: PBO:0031281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transport_phenotype","termid":"PBO:0031281"}


id: GO:0006154
data:
  {"annotated_genes":["SJAG_02959","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87934,87935],"is_not":false,"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine metabolic process","termid":"GO:0046085"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"adenosine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006156"],"synonyms":[{"name":"adenosine breakdown","type":"exact"},{"name":"adenosine catabolism","type":"exact"},{"name":"adenosine degradation","type":"exact"},{"name":"adenosine phosphorolysis","type":"related"}],"termid":"GO:0006154","terms_by_termid":{"GO:0006154":null}}


id: GO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte costimulation","termid":"GO:0031294"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"T cell costimulation","secondary_identifiers":["Reactome:R-HSA-388841"],"synonyms":[{"name":"T cell co-stimulation","type":"exact"},{"name":"T lymphocyte costimulation","type":"exact"},{"name":"T-cell co-stimulation","type":"exact"},{"name":"T-cell costimulation","type":"exact"},{"name":"T-lymphocyte costimulation","type":"exact"}],"termid":"GO:0031295"}


id: PBO:0091950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase jmj4","termid":"PBO:0091950"}


id: PBO:0031076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony_(obsolete_FYPO:0000299)","termid":"PBO:0031076"}


id: PBO:0016589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha ketoglutarate dependent xanthine dioxygenase Xan1","termid":"PBO:0016589"}


id: PBO:0073211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4C","termid":"PBO:0073211"}


id: PBO:0076263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVOP like","termid":"PBO:0076263"}


id: MONDO:0859526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 109 with lymphoproliferation","secondary_identifiers":["OMIM:620282","UMLS:C5830346","MEDGEN:1840982"],"termid":"MONDO:0859526","xrefs":{"Monarch":{"xref_id":"0859526"}}}


id: GO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bundle of His over time, from its formation to the mature structure. The bundle of His is part of the His-Purkinje system that transmits signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"},{"relation_name":"part_of","term_name":"His-Purkinje system development","termid":"GO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His development","synonyms":[{"name":"atrioventricular bundle development","type":"exact"}],"termid":"GO:0003166"}


id: PBO:0077748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll interacting protein","termid":"PBO:0077748"}


id: GO:0020006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubular network of extensions from the symbiont-containing vacuole membrane that protrude into the host cytoplasm.","definition_xrefs":["PMID:3528173","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole membrane","termid":"GO:0020005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuolar membrane network","synonyms":[{"name":"parasitophorous vacuolar membrane network","type":"exact"},{"name":"symbiont-containing vacuole membrane network","type":"exact"},{"name":"tubulovesicular network","type":"narrow"}],"termid":"GO:0020006"}


id: FYECO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hexestrol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ hexestrol","termid":"FYECO:0000348"}


id: PBO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-clumped_colony_morphology_(obsolete_FYPO:0000153)","termid":"PBO:0031277"}


id: GO:0038198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with auxin and transmitting the signal in the cell to initiate a change in cell activity. Auxin is a plant hormone (phytohormone).","definition_xrefs":["PMID:15917797","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"auxin receptor activity","termid":"GO:0038198"}


id: PBO:0067319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 405, pseudogene","termid":"PBO:0067319"}


id: GO:2000913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of galactoglucomannan catabolic process","termid":"GO:2000912"},{"relation_name":"negatively_regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of galactoglucomannan catabolic process","synonyms":[{"name":"negative regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000913"}


id: GO:0018583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl-2,3-diol + O2 = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O.","definition_xrefs":["EC:1.13.11.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biphenyl-2,3-diol 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN","RHEA:14413","UM-BBD_enzymeID:r0390"],"synonyms":[{"name":"2,3-dihydroxybiphenyl 1,2-dioxygenase activity","type":"broad"},{"name":"2,3-dihydroxybiphenyl dioxygenase activity","type":"broad"},{"name":"biphenyl-2,3-diol dioxygenase activity","type":"related"},{"name":"biphenyl-2,3-diol:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0018583"}


id: GO:0061912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The macroautophagy process in which specific structures are targeted by the autophagy process.","definition_xrefs":["PMID:22966490","PMID:20484971","PMID:21997368"],"gene_count":0,"genotype_count":0,"name":"obsolete selective autophagy (obsolete GO:0061912)","termid":"GO:0061912"}


id: PBO:0046611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K11 member 1","termid":"PBO:0046611"}


id: PBO:0109311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in liver cancer 1","termid":"PBO:0109311"}


id: PBO:0003843
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.3","termid":"PBO:0003843"}


id: PBO:0078777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 3-1","termid":"PBO:0078777"}


id: GO:0010710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen catabolic process","synonyms":[{"name":"regulation of collagen breakdown","type":"exact"},{"name":"regulation of collagen catabolism","type":"exact"},{"name":"regulation of collagen degradation","type":"exact"}],"termid":"GO:0010710"}


id: MONDO:0012212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant syndrome caused by mutations in the TGFBR1 gene. It is characterized by vascular abnormalities (aortic and arterial aneurysms, aortic dissection, and tortuosity of the arteries), hypertelorism, bifid uvula, and early fusion of the skull bones.","definition_xrefs":["NCIT:C75119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Loeys-Dietz syndrome","termid":"MONDO:0018954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Loeys-Dietz syndrome 1","secondary_identifiers":["OMIM:609192","GARD:9458","MEDGEN:1646567","Orphanet:97295","UMLS:C4551955","DOID:0070235"],"synonyms":[{"name":"Furlong syndrome","type":"exact"},{"name":"LDS1","type":"related"},{"name":"Loeys-Dietz aortic aneurysm syndrome","type":"related"},{"name":"Loeys-Dietz syndrome 1","type":"exact"},{"name":"Loeys-Dietz syndrome caused by mutation in TGFBR1","type":"exact"},{"name":"Loeys-Dietz syndrome type 1","type":"exact"},{"name":"TGFBR1 Loeys-Dietz syndrome","type":"exact"},{"name":"aortic aneurysm, familial thoracic 5","type":"related"}],"termid":"MONDO:0012212","xrefs":{"Monarch":{"xref_id":"0012212"}}}


id: MONDO:0850223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endocarditis that is characterized by Libman-Sacks vegetations, is common in patients with systemic lupus erythematosus and is commonly complicated with embolic cerebrovascular disease.","definition_xrefs":["DOID:0080740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"endocarditis","termid":"MONDO:0005025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Libman-Sacks endocarditis","secondary_identifiers":["UMLS:C0242380","MEDGEN:69175"],"termid":"MONDO:0850223","xrefs":{"Monarch":{"xref_id":"0850223"}}}


id: MONDO:0022560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder that affects women with a history of uterine leiomyoma, which is found to metastasise within extrauterine sites.The disease develops as a proliferation of multiple nodules composed of smooth muscle cells.The most frequent site of metastasis is the lungs, although other areas may also be affected as well, including some atypical locations, e.g. the heart or spinal cord.","definition_xrefs":["PMID:28426767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign metastasizing leiomyoma","secondary_identifiers":["UMLS:C1511090","MEDGEN:307261"],"termid":"MONDO:0022560","xrefs":{"Monarch":{"xref_id":"0022560"}}}


id: MONDO:0011988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency characterized by neutrophilia with severe neutrophil dysfunction, leukocytosis, a predisposition to bacterial infections and poor wound healing, including an absence of pus in infected areas.","definition_xrefs":["Orphanet:183707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutrophil immunodeficiency syndrome","secondary_identifiers":["icd11.foundation:1459690929","GARD:17087","UMLS:C1842398","MEDGEN:374920","DOID:0112064","OMIM:608203","MESH:C564275","SCTID:723443003"],"synonyms":[{"name":"immunodeficiency 73A with defective neutrophil chemotaxix and leukocytosis","type":"exact"},{"name":"neutrophil immunodeficiency syndrome","type":"exact"}],"termid":"MONDO:0011988","xrefs":{"Monarch":{"xref_id":"0011988"}}}


id: GO:0019217
data:
  {"annotated_genes":["SJAG_03130","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[75484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01402":null,"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0006632"],"synonyms":[{"name":"regulation of fatty acid metabolism","type":"exact"}],"termid":"GO:0019217","terms_by_termid":{"GO:0010510":null,"GO:0045717":null}}


id: PBO:0057462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 581","termid":"PBO:0057462"}


id: MONDO:0010671
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86318],"is_not":false,"summary":null,"term":"MONDO:0010671"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"microphthalmia, Lenz type","termid":"MONDO:0018924"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, syndromic 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:85275","ICD9:759.89","MESH:C537464","SCTID:438504004","MESH:C564457","GARD:15304","UMLS:C0796016","MEDGEN:162898","SCTID:717222003","OMIM:309800","DOID:0111799"],"synonyms":[{"name":"ANOP1, formerly","type":"exact"},{"name":"Lenz dysplasia","type":"exact"},{"name":"Lenz microphthalmia syndrome","type":"exact"},{"name":"MAA, formerly","type":"exact"},{"name":"MCOPS1","type":"exact"},{"name":"MCOPS4","type":"exact"},{"name":"MCOPS4, formerly","type":"exact"},{"name":"microphthalmia syndromic 4","type":"exact"},{"name":"microphthalmia with ankyloblepharon and intellectual disability","type":"exact"},{"name":"microphthalmia with ankyloblepharon and mental retardation","type":"exact"},{"name":"microphthalmia, syndromic 1","type":"exact"},{"name":"microphthalmia, syndromic 4, formerly","type":"exact"},{"name":"microphthalmia, syndromic type 1","type":"exact"},{"name":"syndromic microphthalmia type 4","type":"exact"}],"termid":"MONDO:0010671","terms_by_termid":{"MONDO:0010671":null},"xrefs":{"Monarch":{"xref_id":"0010671"}}}


id: PBO:0047442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor Ia","termid":"PBO:0047442"}


id: PBO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 34","termid":"PBO:0080069"}


id: PBO:0070973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 11","termid":"PBO:0070973"}


id: PBO:0070328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y4","termid":"PBO:0070328"}


id: GO:2000519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell activation","termid":"GO:2000517"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell activation","synonyms":[{"name":"positive regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000519"}


id: FYPO:0001657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal serine import","synonyms":[{"name":"abnormal L-serine import","type":"exact"},{"name":"abnormal L-serine import across plasma membrane","type":"exact"},{"name":"abnormal serine import during mitotic cell cycle","type":"related"},{"name":"abnormal serine import during vegetative growth","type":"exact"},{"name":"abnormal serine import into cell","type":"exact"},{"name":"abnormal serine uptake","type":"exact"}],"termid":"FYPO:0001657"}


id: PBO:0041643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 I","termid":"PBO:0041643"}


id: GO:0021797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain anterior/posterior pattern specification","synonyms":[{"name":"forebrain anterior-posterior pattern specification","type":"exact"}],"termid":"GO:0021797"}


id: GO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A respiratory chain located in the plasma membrane of a cell; made up of the protein complexes that form the electron transport system (the respiratory chain), associated with the plasma membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["GOC:curators","GOC:mah","GOC:imk","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respirasome (obsolete GO:0070470)","synonyms":[{"name":"plasma membrane electron transport chain","type":"exact"},{"name":"plasma membrane respiratory chain","type":"exact"}],"termid":"GO:0070470"}


id: PBO:0090789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat component Erp5/Erp6/Erp1","termid":"PBO:0090789"}


id: PBO:0040638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BASP1 antisense RNA 1","termid":"PBO:0040638"}


id: PBO:0077303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 42","termid":"PBO:0077303"}


id: GO:0009666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the outer membrane of a plastid.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plastid outer membrane organization","synonyms":[{"name":"plastid outer membrane organisation","type":"exact"},{"name":"plastid outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0009666"}


id: PBO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutA divalent cation tolerance homolog","termid":"PBO:0044241"}


id: MONDO:0009591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metachromatic leukodystrophy is an inherited condition characterized by the accumulation of fats called sulfatides in cells, especially cells of the nervous system. This accumulation results in progressive destruction of white matter of the brain, which consists of nerve fibers covered by myelin.Affected individuals experience progressive deterioration of intellectual functions and motor skills, such as the ability to walk. They also develop loss of sensation in the extremities, incontinence, seizures, paralysis, inability to speak, blindness, and hearing loss. Eventually they lose awareness of their surroundings and become unresponsive. This condition is inherited in an autosomal recessive pattern and is caused by mutations in the ARSA and PSAP genes.","definition_xrefs":["GARD:0003230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0002039","MONDO:0002561","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"metachromatic leukodystrophy, juvenile form","secondary_identifiers":["MEDGEN:155528","NANDO:2201203","OMIM:250100","SCTID:44359008","NANDO:1200080","UMLS:C0751276","Orphanet:309263","GARD:21329"],"synonyms":[{"name":"ARSA deficiency","type":"related"},{"name":"MLD","type":"related"},{"name":"MLD, juvenile form","type":"exact"},{"name":"Mld","type":"related"},{"name":"arylsulfatase A deficiency","type":"related"},{"name":"arylsulfatase A deficiency, juvenile form","type":"exact"},{"name":"cerebral sclerosis diffuse metachromatic form","type":"related"},{"name":"cerebral sclerosis, diffuse, metachromatic form","type":"related"},{"name":"cerebroside sulfatase deficiency","type":"related"},{"name":"leukodystrophy metachromatic","type":"related"},{"name":"metachromatic leukodystrophy","type":"related"},{"name":"metachromatic leukodystrophy, adult","type":"related"},{"name":"metachromatic leukodystrophy, juvenile","type":"related"},{"name":"metachromatic leukodystrophy, juvenile form","type":"exact"},{"name":"metachromatic leukodystrophy, late infantile","type":"related"},{"name":"metachromatic leukoencephalopathy","type":"related"},{"name":"pseudoarylsulfatase A deficiency","type":"related"},{"name":"sulfatide lipidosis","type":"related"}],"termid":"MONDO:0009591","xrefs":{"Monarch":{"xref_id":"0009591"}}}


id: PATO:0000842
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000842 absolute auditory threshold value (obsolete PATO:0000842)","termid":"PATO:0000842"}


id: PBO:0036290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule plus-end binding protein, EB1 family Mal3","termid":"PBO:0036290"}


id: PBO:0068717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 6, pseudogene","termid":"PBO:0068717"}


id: GO:0034877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + acceptor + H2O = 2-hydroxyisonicotinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate dehydrogenase activity (obsolete GO:0034877)","termid":"GO:0034877"}


id: MONDO:0016745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse leptomeningeal melanocytosis is a rare tumor of meninges arising from leptomeningeal melanocytes, characterized by diffuse infiltration of the leptomeninges (pia mater and arachnoidea) anywhere in the central nervous system. Clinical features may include stillbirth, intracranial hypertension and hydrocephalus, seizure, ataxia, syringomyelia, cranial nerve palsy, intracranial hemorrhage, sphincter dysfunction and neuropsychiatric symptoms. Transformation into malignant melanoma of the central nervous system was reported. It may be associated with congenital nevi, as a part of neurocutaneous melanosis.","definition_xrefs":["Orphanet:252031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of meninges","termid":"MONDO:0016743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse leptomeningeal melanocytosis","secondary_identifiers":["GARD:20739","UMLS:C4749348","MEDGEN:1651380"],"synonyms":[{"name":"DLM","type":"exact"},{"name":"leptomeningeal melanomatosis","type":"broad"}],"termid":"MONDO:0016745","xrefs":{"Monarch":{"xref_id":"0016745"}}}


id: PBO:0110264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex large subunit Rpb1","termid":"PBO:0110264"}


id: GO:0031218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in arabinogalactans.","definition_xrefs":["GOC:mlg","EC:3.2.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arabinogalactan endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.89-RXN"],"synonyms":[{"name":"arabinogalactan 4-beta-D-galactanohydrolase activity","type":"related"},{"name":"arabinogalactanase activity","type":"exact"},{"name":"endo-1,4-beta-galactanase activity","type":"exact"},{"name":"galactanase activity","type":"exact"}],"termid":"GO:0031218"}


id: PR:P25457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01432","PANTHER:PTHR11524:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.07","secondary_identifiers":["UniProtKB:P25457"],"synonyms":[{"name":"Spom972h-RPL7","type":"exact"}],"termid":"PR:P25457"}


id: MONDO:0007749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive infantile hypercalcemia (obsolete MONDO:0007749)","termid":"MONDO:0007749","xrefs":{"Monarch":{"xref_id":"0007749"}}}


id: PATO:0001013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001013 absolute intensity value (obsolete PATO:0001013)","termid":"PATO:0001013"}


id: GO:0170007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a lipid droplet with an endoplasmic reticulum membrane, via membrane lipid binding, to establish membrane contact sites and mediate exchange and communication.","definition_xrefs":["PMID:35389430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"endoplasmic reticulum-lipid droplet tether activity","termid":"GO:0170007"}


id: PBO:0036515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get4 (predicted)","termid":"PBO:0036515"}


id: GO:0060090
data:
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