# terms

id: PBO:0050893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate early response 5","termid":"PBO:0050893"}


id: PBO:0065917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 3","termid":"PBO:0065917"}


id: FYPO:0007859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the nucleus divides into two or more fragments, each enclosed by nuclear envelope and containing a DNA mass, in a cell that does not form a mitotic spindle or undergo cytokinesis. In these cells, the nucleus does not elongate into a dumbbell shape, but instead the nuclear envelope takes on a ruffled aspect and then eventually pinches into two nuclear masses.","definition_xrefs":["PMID:20967237","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"nuclear division in absence of mitotic spindle","synonyms":[{"name":"nuclear division in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"nuclear division in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"nuclear fission","type":"exact"},{"name":"nuclear fission in absence of mitotic spindle","type":"exact"},{"name":"rel syn DNA segregation in absence of mitotic spindle","type":"related"}],"termid":"FYPO:0007859"}


id: PBO:0077768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 4","termid":"PBO:0077768"}


id: PATO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's underlying structure not changing over time.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permanent","synonyms":[{"name":"permanent structure","type":"exact"}],"termid":"PATO:0002293"}


id: GO:0006789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bilirubin monoglucuronide or bilirubin diglucuronide, water-soluble derivatives of bilirubin.","definition_xrefs":["DOI:10.1016/0305-0491(80)90243-6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"bilirubin conjugation","termid":"GO:0006789"}


id: PBO:0031051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_metabolic_process_during_vegetative_growth","termid":"PBO:0031051"}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: MONDO:0015808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Folliculotropic mycosis fungoides is a rare variant of mycosis fungoides (MF), a form of cutaneous T-cell lymphoma, and is characterized by the presence of folliculotropic infiltrates in patch-plaque lesions usually involving the head and neck area.","definition_xrefs":["Orphanet:178512"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mycosis fungoides","termid":"MONDO:0009691"},{"relation_name":"is_a","term_name":"secondary catabolic mucinosis of skin","termid":"MONDO:0021655"},{"relation_name":"is_a","term_name":"mycosis fungoides variant","termid":"MONDO:0045071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"folliculotropic mycosis fungoides","secondary_identifiers":["GARD:20154","ICD9:701.8","icd11.foundation:1335995469","NCIT:C35685","MEDGEN:302080","SCTID:404109006","UMLS:C1627767"],"synonyms":[{"name":"alopecia mucinosa (t cell lymphoma)","type":"related"},{"name":"follicular mucinosis type mycosis fungoides","type":"exact"},{"name":"follicular mycosis fungoides","type":"exact"},{"name":"folliculotropic mycosis fungoides","type":"exact"},{"name":"mycosis fungoides-associated follicular mucinosis","type":"exact"}],"termid":"MONDO:0015808","xrefs":{"Monarch":{"xref_id":"0015808"}}}


id: MONDO:0035548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial jak1 deficiency","secondary_identifiers":["Orphanet:574957","ICD10CM:D84.8","UMLS:C5680361","MEDGEN:1830105"],"synonyms":[{"name":"Autosomal recessive MSMD due to partial JAK1 deficiency","type":"exact"}],"termid":"MONDO:0035548","xrefs":{"Monarch":{"xref_id":"0035548"}}}


id: MONDO:0017933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation is a mitochondrial oxidative phosphorylation disorder characterized by hypertrophic and dilated cardiomyopathy, failure to thrive, myopathy with generalized hypotonia and increased creatine kinase, developmental delay and/or regression with cerebral atrophy on brain MRI, renal manifestations including chronic renal failure, renal tubular acidosis and lactic acidosis. Additional clinical features include seizures and respiratory failure.","definition_xrefs":["Orphanet:324525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation","secondary_identifiers":["UMLS:C4749942","GARD:21442","MEDGEN:1650300"],"synonyms":[{"name":"hypertrophic cardiomyopathy and renal tubular disease due to mtDNA mutation","type":"exact"}],"termid":"MONDO:0017933","xrefs":{"Monarch":{"xref_id":"0017933"}}}


id: GO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the epithelial cells to the mesenchymal cells of the salivary gland.","definition_xrefs":["PMID:18559345","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signalling","type":"exact"}],"termid":"GO:0060683"}


id: PBO:0079583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 4","termid":"PBO:0079583"}


id: GO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRK receptor activity (obsolete GO:0005013)","synonyms":[{"name":"neurotrophin TRK receptor activity","type":"exact"}],"termid":"GO:0005013"}


id: MONDO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postsurgical hypothyroidism","secondary_identifiers":["MEDGEN:509534","DOID:1458","ICD9:244.0","SCTID:27059002","UMLS:C0154157"],"synonyms":[{"name":"post-surgical hypothyroidism","type":"exact"},{"name":"postoperative hypothyroidism","type":"exact"}],"termid":"MONDO:0002002","xrefs":{"Monarch":{"xref_id":"0002002"}}}


id: PBO:0030542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cAMP_level_during_glucose_starvation","termid":"PBO:0030542"}


id: PR:P87228
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-3-phosphoglycerate dehydrogenase SerA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3-phosphoglycerate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.07","secondary_identifiers":["UniProtKB:P87228"],"synonyms":[{"name":"3-PGDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-serA","type":"exact"}],"termid":"PR:P87228"}


id: GO:0044034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biosynthetic process - chemical reactions and pathways resulting in the formation of substances - which involves more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism biosynthetic process (obsolete GO:0044034)","synonyms":[{"name":"multi-organism biosynthesis","type":"exact"},{"name":"multi-organismal biosynthesis","type":"exact"},{"name":"multi-organismal biosynthetic process","type":"exact"}],"termid":"GO:0044034"}


id: GO:2001317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kojic acid.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"kojic acid metabolic process","termid":"GO:2001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kojic acid biosynthetic process","synonyms":[{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"C6H6O4 anabolism","type":"related"},{"name":"C6H6O4 biosynthesis","type":"related"},{"name":"C6H6O4 biosynthetic process","type":"related"},{"name":"C6H6O4 formation","type":"related"},{"name":"C6H6O4 synthesis","type":"related"},{"name":"kojic acid anabolism","type":"exact"},{"name":"kojic acid biosynthesis","type":"exact"},{"name":"kojic acid formation","type":"exact"},{"name":"kojic acid synthesis","type":"exact"}],"termid":"GO:2001317"}


id: PBO:0064139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, membrane associated tyrosine/threonine 1","termid":"PBO:0064139"}


id: MONDO:0008528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tear protein, anodal","secondary_identifiers":["MEDGEN:348829","OMIM:186890","UMLS:C1861283"],"synonyms":[{"name":"tear protein, anodal","type":"exact"}],"termid":"MONDO:0008528","xrefs":{"Monarch":{"xref_id":"0008528"}}}


id: MONDO:0006336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endometrioid adenocarcinoma that arises from the ovary and exhibits squamous differentiation. The squamous cell component often has a cytologically benign appearance.","definition_xrefs":["NCIT:C40061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian endometrioid adenocarcinoma","termid":"MONDO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","secondary_identifiers":["UMLS:C2212017","MEDGEN:389178","EFO:1000417"],"synonyms":[{"name":"ovarian adenoacanthoma","type":"exact"},{"name":"ovarian adenosquamous carcinoma","type":"exact"},{"name":"ovarian endometrioid adenocarcinoma with squamous differentiation","type":"exact"}],"termid":"MONDO:0006336","xrefs":{"Monarch":{"xref_id":"0006336"}}}


id: GO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B-1 B cell differentiation. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"regulates","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B-1 B cell differentiation","synonyms":[{"name":"regulation of B-1 B cell development","type":"related"},{"name":"regulation of B-1 B lymphocyte differentiation","type":"exact"},{"name":"regulation of B-1 B-cell differentiation","type":"exact"},{"name":"regulation of B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001924"}


id: PR:P0C016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0C016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-40S ribosomal protein S27a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.11c","synonyms":[{"name":"Spom972h-ubi3","type":"exact"}],"termid":"PR:P0C016"}


id: MONDO:0017889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucinous tubular and spindle cell renal carcinoma (obsolete MONDO:0017889)","termid":"MONDO:0017889","xrefs":{"Monarch":{"xref_id":"0017889"}}}


id: PBO:0048536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 2","termid":"PBO:0048536"}


id: PBO:0111827
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP1/OBG family","termid":"PBO:0111827"}


id: MONDO:0007186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder characterized by reflux of the gastric and/or duodenal contents into the distal esophagus. It is usually caused by incompetence of the lower esophageal sphincter. Symptoms include heartburn and acid indigestion. It may cause injury to the esophageal mucosa.","definition_xrefs":["NCIT:C26781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastroesophageal reflux disease","secondary_identifiers":["OMIM:109350","DOID:8534","EFO:0003948","MESH:D005764","SCTID:235595009","UMLS:C0017168","ICD9:530.81","MEDGEN:6553"],"synonyms":[{"name":"GERD","type":"exact"},{"name":"GERD - gastro-esophageal reflux disease","type":"exact"},{"name":"Gastresophageal reflux","type":"exact"},{"name":"acid reflux","type":"exact"},{"name":"gastro-esophageal reflux","type":"exact"},{"name":"gastroesophageal reflux","type":"exact"},{"name":"gastroesophageal reflux disease","type":"exact"},{"name":"gastroesophageal reflux, paediatric","type":"related"},{"name":"gastroesophageal reflux, pediatric","type":"related"},{"name":"ger","type":"related"}],"termid":"MONDO:0007186","xrefs":{"Monarch":{"xref_id":"0007186"}}}


id: PBO:0079394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 1","termid":"PBO:0079394"}


id: MONDO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation-related bone disorder (obsolete MONDO:0018292)","secondary_identifiers":["Orphanet:371195"],"synonyms":[{"name":"CDG-related bone disorder","type":"exact"}],"termid":"MONDO:0018292","xrefs":{"Monarch":{"xref_id":"0018292"}}}


id: GO:0015386
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80421],"is_not":false,"summary":null,"term":"GO:0015386"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in).","definition_xrefs":["TC:2.A.37.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:potassium antiporter activity","termid":"GO:0022821"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium:proton antiporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:29467","MetaCyc:TRANS-RXN-42"],"synonyms":[{"name":"potassium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015386","terms_by_termid":{"GO:0015386":null}}


id: GO:0140274
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837","SJAG_04140","SJAG_00082","SJAG_01224","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98984],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[117072,102743,111589,90356,94167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[117075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01224":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"repair of kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140274","terms_by_termid":{"GO:0140274":null,"GO:0140429":null,"GO:1904967":null}}


id: FYECO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 28 days. This medium is then replaced with nitrogen containing minimal medium and cells are allowed to recover for 10-50 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"28 days nitrogen starvation followed by 10-50 hours recovery in minimal medium","termid":"FYECO:0000241"}


id: MONDO:0016748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemangioblastoma is a rare, benign, highly vascularized tumor of the central nervous system, most often located in the cerebellum or spinal cord, presenting in adulthood and manifesting with dizziness, nausea, malaise, headache, bladder or bowel dysfunction, numbness, weakness and pain in the upper or lower extremities, and often associated with von Hippel-Lindau disease (VHL). Exceptional cases of hemangioblastoma arising outside of the central nervous system have been reported.","definition_xrefs":["Orphanet:252054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioblastoma","secondary_identifiers":["UMLS:C0206734","ICD10CM:D33.4","MedDRA:10018813","MESH:D018325","ICDO:9161/1","NCIT:C3801","GARD:8232","ONCOTREE:HMBL","MEDGEN:104929","DOID:5241"],"synonyms":[{"name":"HMBL","type":"related"},{"name":"angioblastoma","type":"exact"},{"name":"capillary hemangioblastoma","type":"exact"},{"name":"hemangioblastoma","type":"exact"}],"termid":"MONDO:0016748","xrefs":{"Monarch":{"xref_id":"0016748"}}}


id: GO:0045990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["PMID:9618445","GOC:go_curators","GOC:mah","PMID:18359269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite regulation of transcription","synonyms":[{"name":"regulation of transcription by carbon catabolites","type":"exact"}],"termid":"GO:0045990"}


id: GO:1902081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:8349590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"negatively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"down regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"down-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"downregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"inhibition of calcium ion import into sarcoplasmic reticulum","type":"narrow"}],"termid":"GO:1902081"}


id: PR:O74113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDC45-related protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10507:SF0","PRO:DNx","OMA:SCHPO01953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 45 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.02","secondary_identifiers":["UniProtKB:O74113"],"synonyms":[{"name":"Spom972h-CDC45","type":"exact"},{"name":"suppressor of nda4 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74113"}


id: MONDO:0013056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial substrate carrier disorder characterized by severe muscular hypotonia, seizures (with or without episodic apnea) beginning in the first year of life, and arrested psychomotor development (affecting mainly motor skills). Severe spasticity with hyperreflexia has also been reported. Global cerebral hypomyelination is a characteristic imaging feature of this disease.","definition_xrefs":["Orphanet:353217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 39","secondary_identifiers":["DOID:0080349","MEDGEN:414492","OMIM:612949","MESH:C567847","SCTID:726702005","UMLS:C2751855","GARD:17532"],"synonyms":[{"name":"AGC1 deficiency","type":"exact"},{"name":"DEE39","type":"exact"},{"name":"EIEE39","type":"exact"},{"name":"SLC25A12 early infantile epileptic encephalopathy","type":"exact"},{"name":"aspartate-glutamate carrier 1 deficiency","type":"related"},{"name":"developmental and epileptic encephalopathy 39","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SLC25A12","type":"exact"},{"name":"epileptic encephalopathy with global cerebral demyelination","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 39","type":"exact"},{"name":"hypomyelination, global cerebral","type":"related"},{"name":"mitochondrial aspartate-glutamate carrier 1 deficiency","type":"exact"}],"termid":"MONDO:0013056","xrefs":{"Monarch":{"xref_id":"0013056"}}}


id: PBO:0038818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21 pseudogene 1","termid":"PBO:0038818"}


id: PBO:0077735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS2 antisense RNA 1","termid":"PBO:0077735"}


id: FYPO:0000350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal actin cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"actin cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000350"}


id: MONDO:0000557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary ataxia (obsolete MONDO:0000557)","termid":"MONDO:0000557","xrefs":{"Monarch":{"xref_id":"0000557"}}}


id: PR:Q9P7T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC694.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7T7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide mononucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.03","synonyms":[{"name":"NMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMN-specific adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC694.03","type":"exact"},{"name":"protein POF1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7T7"}


id: GO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-D-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["EC:3.2.1.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"alpha-glucuronidase activity","secondary_identifiers":["MetaCyc:3.2.1.139-RXN","RHEA:20005"],"synonyms":[{"name":"alpha-D-glucosiduronate glucuronohydrolase activity","type":"related"},{"name":"alpha-glucosiduronase activity","type":"related"}],"termid":"GO:0046559"}


id: GO:0061713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The step in the formation of the neural tube, where the paired anterior neural folds are brought together and fuse at the dorsal midline.","definition_xrefs":["GOC:BHF","GOC:dph","PMID:17286298","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neural tube closure","termid":"GO:0061713"}


id: PATO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an entity or set of entities in which size increases or decreases along the extent of the entity or set.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered size","synonyms":[{"name":"gradient of size","type":"exact"}],"termid":"PATO:0005015"}


id: GO:0070268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of programmed cell death that occurs in the epidermis, morphologically and biochemically distinct from apoptosis. It leads to the formation of corneocytes, i.e. dead keratinocytes containing an amalgam of specific proteins (e.g., keratin, loricrin, SPR and involucrin) and lipids (e.g., fatty acids and ceramides), which are necessary for the function of the cornified skin layer (mechanical resistance, elasticity, water repellence and structural stability).","definition_xrefs":["GOC:krc","PMID:18846107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"keratinization","termid":"GO:0031424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cornification","secondary_identifiers":["Reactome:R-HSA-6809371"],"termid":"GO:0070268"}


id: PBO:0055956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 70","termid":"PBO:0055956"}


id: FYPO:0007019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 7-methylguanosine is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal tRNA guanosine 7-methylation","synonyms":[{"name":"normal 7-methylguanosine level in tRNA","type":"related"},{"name":"normal tRNA 7-methylguanosine formation","type":"exact"},{"name":"normal tRNA guanosine 7-methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA guanosine 7-methylation during vegetative growth","type":"exact"},{"name":"normal tRNA m7G formation","type":"exact"}],"termid":"FYPO:0007019"}


id: PBO:0062622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily G member 1 pseudogene","termid":"PBO:0062622"}


id: GO:1901716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid catabolic process","termid":"GO:1901715"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"down regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down regulation of GABA catabolic process","type":"exact"},{"name":"down regulation of GABA catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down-regulation of GABA catabolic process","type":"exact"},{"name":"down-regulation of GABA catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"downregulation of GABA catabolic process","type":"exact"},{"name":"downregulation of GABA catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolism","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolism","type":"exact"},{"name":"inhibition of GABA catabolic process","type":"exact"},{"name":"inhibition of GABA catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid catabolic process","type":"narrow"},{"name":"inhibition of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid degradation","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"negative regulation of GABA catabolic process","type":"exact"},{"name":"negative regulation of GABA catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901716"}


id: PBO:0076176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1D member 1 pseudogene 2","termid":"PBO:0076176"}


id: PBO:0084502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for prospore membrane morphogenesis; required for the proper shape of the prospore membrane (PSM) and for spore wall formation; functions cooperatively with SPO71 in PSM elongation; physically interacts with Spo71p; genetically antagonistic to SPO1, similar to SPO71; localizes to the PSM; required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis; dysferlin domain-only protein","termid":"PBO:0084502"}


id: MONDO:0015628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2A von Willebrand disease (type 2A VWD) is a subtype of type 2 VWD characterized by a bleeding disorder associated with a decrease in the affinity of the Willebrand factor (von Willebrand factor; VWF) for platelets and the subendothelium caused by a deficiency of high molecular weight VWF multimers.","definition_xrefs":["Orphanet:166084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"von Willebrand disease 2","termid":"MONDO:0013304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease type 2A","secondary_identifiers":["MEDGEN:220920","SCTID:359714009","UMLS:C1282968","GARD:17021","icd11.foundation:1009291548","NCIT:C131686"],"synonyms":[{"name":"von Willebrand disease, type 2A","type":"exact"}],"termid":"MONDO:0015628","xrefs":{"Monarch":{"xref_id":"0015628"}}}


id: MONDO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary epidermolysis bullosa associated with ocular features (obsolete MONDO:0016997)","secondary_identifiers":["Orphanet:263676"],"termid":"MONDO:0016997","xrefs":{"Monarch":{"xref_id":"0016997"}}}


id: PBO:0018172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex ubiquitin-protein ligase E3 subunit 1","termid":"PBO:0018172"}


id: FYPO:0004534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus begins earlier than normal.","definition_xrefs":["PMID:16751704","GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature ascospore release from ascus","synonyms":[{"name":"accelerated ascospore release from ascus","type":"related"},{"name":"advanced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004534"}


id: PBO:0117125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNCAIP antisense RNA 1","termid":"PBO:0117125"}


id: MONDO:1010209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, non-human animal","secondary_identifiers":["OMIA:000615"],"termid":"MONDO:1010209","xrefs":{"Monarch":{"xref_id":"1010209"}}}


id: GO:0008153
data:
  {"annotated_genes":["SJAG_02408"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73293],"is_not":false,"summary":null,"term":"GO:0008153"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-aminobenzoate, an intermediate in the synthesis of folic acid, a compound which some organisms, e.g. prokaryotes, eukaryotic microbes, and plants, can synthesize de novo. Others, notably mammals, cannot. In yeast, it is present as a factor in the B complex of vitamins.","definition_xrefs":["MetaCyc:PWY-6543","PMID:11960743","ISBN:0198506732","PMID:11377864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"para-aminobenzoic acid metabolic process","termid":"GO:0046482"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02408":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"4-aminobenzoate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"4-aminobenzoic acid biosynthesis","type":"exact"},{"name":"4-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"PABA biosynthesis","type":"exact"},{"name":"PABA biosynthetic process","type":"exact"},{"name":"p-aminobenzoic acid biosynthesis","type":"exact"},{"name":"p-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"para-aminobenzoic acid anabolism","type":"exact"},{"name":"para-aminobenzoic acid biosynthesis","type":"exact"},{"name":"para-aminobenzoic acid biosynthetic process","type":"exact"},{"name":"para-aminobenzoic acid formation","type":"exact"},{"name":"para-aminobenzoic acid synthesis","type":"exact"},{"name":"vitamin Bx biosynthesis","type":"exact"},{"name":"vitamin Bx biosynthetic process","type":"exact"}],"termid":"GO:0008153","terms_by_termid":{"GO:0008153":null}}


id: GO:0005227
data:
  {"annotated_genes":["SJAG_03895","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73416,80197],"is_not":false,"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic cation by a channel that opens when a calcium cation has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:dph","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium-activated cation channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9717383"],"synonyms":[{"name":"calcium activated cation channel activity","type":"exact"},{"name":"intracellular calcium-activated potassium channel","type":"narrow"},{"name":"polycystin","type":"narrow"}],"termid":"GO:0005227","terms_by_termid":{"GO:0005227":null}}


id: PR:Q9Y7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zuo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zuotin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.01c","synonyms":[{"name":"DnaJ-related protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"J protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-zuo1","type":"exact"},{"name":"ribosome-associated complex subunit zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7I8"}


id: PBO:0078458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 10 (non-functional)","termid":"PBO:0078458"}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: GO:1904242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12771515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"regulation of pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1904242"}


id: PBO:0067412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 523, pseudogene","termid":"PBO:0067412"}


id: GO:0010650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"positively_regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by electrical coupling","termid":"GO:0010650"}


id: PBO:0043125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 3","termid":"PBO:0043125"}


id: PBO:0026853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026853"}


id: FYPO:0006893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased inositol hexakisphosphate kinase activity","synonyms":[{"name":"reduced inositol hexakisphosphate kinase activity","type":"exact"}],"termid":"FYPO:0006893"}


id: GO:0016467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.1","TC:3.A.2.1.3"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating F-type ATPase activity (obsolete GO:0016467)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"F1-ATPase activity","type":"exact"},{"name":"hydrogen-translocating F-type ATPase activity","type":"exact"},{"name":"proton-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016467"}


id: MONDO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the zone of skin","direct_ancestors":[{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"epithelial skin neoplasm","termid":"MONDO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin carcinoma","secondary_identifiers":["UMLS:C0699893","EFO:0009259","DOID:3451","MEDGEN:195945","NCIT:C4914"],"synonyms":[{"name":"carcinoma of skin","type":"exact"},{"name":"carcinoma of the skin","type":"exact"},{"name":"carcinoma of zone of skin","type":"exact"},{"name":"non-melanoma cancer of skin","type":"exact"},{"name":"non-melanoma cancer of the skin","type":"exact"},{"name":"non-melanoma skin cancer","type":"exact"},{"name":"nonmelanoma skin cancer","type":"exact"},{"name":"skin cancer, non-melanoma","type":"exact"},{"name":"skin carcinoma","type":"exact"},{"name":"zone of skin carcinoma","type":"exact"}],"termid":"MONDO:0002656","xrefs":{"Monarch":{"xref_id":"0002656"}}}


id: GO:1900181
data:
  {"annotated_genes":["SJAG_01311","SJAG_01084"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114860],"is_not":false,"summary":null,"term":"GO:1900181"},{"annotations":[106186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to nucleus","type":"exact"},{"name":"down regulation of protein localization in cell nucleus","type":"exact"},{"name":"down regulation of protein localization in nucleus","type":"exact"},{"name":"down regulation of protein localization to nucleus","type":"exact"},{"name":"down-regulation of protein localisation to nucleus","type":"exact"},{"name":"down-regulation of protein localization in cell nucleus","type":"exact"},{"name":"down-regulation of protein localization in nucleus","type":"exact"},{"name":"down-regulation of protein localization to nucleus","type":"exact"},{"name":"downregulation of protein localisation to nucleus","type":"exact"},{"name":"downregulation of protein localization in cell nucleus","type":"exact"},{"name":"downregulation of protein localization in nucleus","type":"exact"},{"name":"downregulation of protein localization to nucleus","type":"exact"},{"name":"inhibition of protein localisation to nucleus","type":"narrow"},{"name":"inhibition of protein localization in cell nucleus","type":"narrow"},{"name":"inhibition of protein localization in nucleus","type":"narrow"},{"name":"inhibition of protein localization to nucleus","type":"narrow"},{"name":"negative regulation of protein localisation to nucleus","type":"exact"},{"name":"negative regulation of protein localization in cell nucleus","type":"exact"},{"name":"negative regulation of protein localization in nucleus","type":"exact"}],"termid":"GO:1900181","terms_by_termid":{"GO:0042308":null,"GO:1900181":null}}


id: PBO:0044016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 epsilon","termid":"PBO:0044016"}


id: MONDO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic syndrome characterized by dysplasia seen in at least 10% of the early cells of 1 cell type (either red blood cells, white blood cells, or megakaryocytes) in the bone marrow.","definition_xrefs":["doi:10.5772/intechopen.82532"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myelodysplastic syndrome with multilineage dysplasia","termid":"MONDO:0019453"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with single lineage dysplasia","secondary_identifiers":["UMLS:C2826318","MedDRA:10038269","MEDGEN:415300","icd11.foundation:149518956","EFO:0003802","Orphanet:98826","MESH:D000753","SCTID:109996008","GARD:19585","ICD9:238.72","ICDO:9980/3","NCIT:C82591","SCTID:1153345005","NCIT:C2872"],"synonyms":[{"name":"MDS with single lineage dysplasia","type":"exact"},{"name":"MDS-SLD","type":"exact"},{"name":"RA","type":"exact"},{"name":"aregenerative anaemia","type":"related"},{"name":"aregenerative anemia","type":"related"},{"name":"refractory anaemia","type":"exact"},{"name":"refractory anemia","type":"exact"}],"termid":"MONDO:0005272","xrefs":{"Monarch":{"xref_id":"0005272"}}}


id: GO:0070553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with nicotinic acid to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:12522134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"nicotinic acid receptor activity","synonyms":[{"name":"niacin receptor activity","type":"exact"}],"termid":"GO:0070553"}


id: GO:1901212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber morphogenesis","termid":"GO:1901221"},{"relation_name":"positively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber formation","synonyms":[{"name":"activation of cardiac chamber formation","type":"narrow"},{"name":"activation of heart chamber formation","type":"exact"},{"name":"positive regulation of heart chamber formation","type":"exact"},{"name":"up regulation of cardiac chamber formation","type":"exact"},{"name":"up regulation of heart chamber formation","type":"exact"},{"name":"up-regulation of cardiac chamber formation","type":"exact"},{"name":"up-regulation of heart chamber formation","type":"exact"},{"name":"upregulation of cardiac chamber formation","type":"exact"},{"name":"upregulation of heart chamber formation","type":"exact"}],"termid":"GO:1901212"}


id: PBO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine cyclodeaminase family (predicted)","termid":"PBO:0001213"}


id: PBO:0047176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 9","termid":"PBO:0047176"}


id: MONDO:0017204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxic maculopathy due to antimalarial drugs is a rare, acquired eye disease, due to long-term exposure to chloroquinine (CQ) or hydrochloroquinine (HCQ), characterized by a slowly progressive, usually non-reversible, development of bilateral atrophic bull's-eye maculopathy (progressive loss of central vision acuity, reduced color vision and central scotoma), which in severe cases can spread over the entire fundus, leading to widespread retinal atrophy and visual loss.","definition_xrefs":["Orphanet:279894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"toxic maculopathy due to antimalarial drugs","secondary_identifiers":["UMLS:C4706522","ICD10CM:H35.3","MEDGEN:1636117","SCTID:763621004"],"termid":"MONDO:0017204","xrefs":{"Monarch":{"xref_id":"0017204"}}}


id: GO:0032376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sterol transport","termid":"GO:0032373"},{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"positively_regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol transport","synonyms":[{"name":"activation of cholesterol transport","type":"narrow"},{"name":"stimulation of cholesterol transport","type":"narrow"},{"name":"up regulation of cholesterol transport","type":"exact"},{"name":"up-regulation of cholesterol transport","type":"exact"},{"name":"upregulation of cholesterol transport","type":"exact"}],"termid":"GO:0032376"}


id: GO:0052865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-deoxy-D-xylulose 5-phosphate, the 5-phospho derivative of 1-deoxy-D-xylulose. 1-deoxy-D-xylulose 5-phosphate is an intermediate in the non-mevalonate pathway and a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-deoxy-D-xylulose 5-phosphate metabolic process","termid":"GO:0052863"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-deoxy-D-xylulose 5-phosphate biosynthetic process","synonyms":[{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate anabolism","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate biosynthesis","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate biosynthetic process","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate formation","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate synthesis","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate anabolism","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate biosynthesis","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate formation","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate synthesis","type":"exact"}],"termid":"GO:0052865"}


id: PBO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 5","termid":"PBO:0043877"}


id: PBO:0038370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulated_by","termid":"PBO:0038370"}


id: PBO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_metabolism_phenotype","termid":"PBO:0031290"}


id: GO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031630"}


id: MONDO:0022745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed dust pneumoconiosis","secondary_identifiers":["UMLS:C0264436","ICD9:504","MEDGEN:78109","SCTID:32139003"],"synonyms":[{"name":"Mixed dust pneumoconiosis","type":"related"},{"name":"labrador lung","type":"related"},{"name":"mixed dust pneumoconiosis","type":"exact"}],"termid":"MONDO:0022745","xrefs":{"Monarch":{"xref_id":"0022745"}}}


id: GO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a growth hormone and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"growth hormone receptor activity","termid":"GO:0004903"}


id: PBO:0063710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5","termid":"PBO:0063710"}


id: PATO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000739 absolute enzyme function value (obsolete PATO:0000739)","termid":"PATO:0000739"}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: PATO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being partly divided into a determinate number of regions.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lobed","termid":"PATO:0001979"}


id: GO:0070515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to talin.","definition_xrefs":["PMID:8663236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-talin complex","synonyms":[{"name":"ITGA2b-ITGB3-TLN1 complex","type":"narrow"}],"termid":"GO:0070515"}


id: PBO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp2","termid":"PBO:0005698"}


id: MONDO:0012656
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85847],"is_not":false,"summary":null,"term":"MONDO:0012656"}]},"cv_name":"mondo","definition":"Lethal congenital contracture syndrome type 3 is a rare arthrogryposis syndrome characterized by clinical features identical to Lethal congenital contracture syndrome type 2 (i.e. multiple congenital contactures (typically extended elbows and flexed knees), micrognathia, anterior horn cells degeneration, skeletal muscle atrophy (mainly in the lower limbs), in the absence of hydrops, pterygia or bone fractures), but without bladder enlargement.","definition_xrefs":["Orphanet:137783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369555","GARD:12644","OMIM:611369","SCTID:715420005","MESH:C566961","DOID:0060653","UMLS:C1969655"],"synonyms":[{"name":"Israeli Bedouin type B multiple contracture syndrome","type":"exact"},{"name":"LCCS3","type":"exact"},{"name":"PIP5K1C lethal congenital contracture syndrome","type":"exact"},{"name":"lethal congenital contractural syndrome 3","type":"exact"},{"name":"lethal congenital contracture syndrome 3","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in PIP5K1C","type":"exact"},{"name":"lethal congenital contracture syndrome type 3","type":"exact"},{"name":"multiple contracture syndrome, Israeli Bedouin type B","type":"related"}],"termid":"MONDO:0012656","terms_by_termid":{"MONDO:0012656":null},"xrefs":{"Monarch":{"xref_id":"0012656"}}}


id: PBO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IB","termid":"PBO:0061547"}


id: MOD:01252
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00933. Remap to MOD:00933.","definition_xrefs":["PubMed:9448752","Unimod:319#R"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01252 5-hydro-5-methylimidazol-4-one, methylglyoxal arginine adduct (+54 amu) (obsolete MOD:01252)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:01252"}


id: PBO:0057301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514a-2","termid":"PBO:0057301"}


id: PBO:0088152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-ATPase assembly factor; functions with other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector (V0); protein abundance increases in response to DNA replication stress","termid":"PBO:0088152"}


id: PR:Q09925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine palmitoyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13693:SF3","OMA:SCHPO01765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.08","secondary_identifiers":["UniProtKB:Q09925"],"synonyms":[{"name":"SPT 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPTLC2","type":"exact"},{"name":"long chain base biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09925"}


id: MONDO:0011297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nocturnal frontal lobe epilepsy that has material basis in variation in the chromosome region 15q24.","definition_xrefs":["PMID:9758605","DOID:0060683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 2","secondary_identifiers":["GARD:15352","UMLS:C1864125","MESH:C566400","MEDGEN:351053","OMIM:603204"],"synonyms":[{"name":"ENFL2","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 2","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 2","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 2","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 2","type":"exact"}],"termid":"MONDO:0011297","xrefs":{"Monarch":{"xref_id":"0011297"}}}


id: PBO:0057772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR2117 host gene","termid":"PBO:0057772"}


id: PBO:0090241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1","termid":"PBO:0090241"}


id: MONDO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the ovary.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"},{"relation_name":"is_a","term_name":"oophoritis","termid":"MONDO:0006877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous oophoritis","secondary_identifiers":["DOID:2148","icd11.foundation:1634640694","ICD9:016.6","ICD9:016.60","MEDGEN:546959","SCTID:84194006","UMLS:C0275932"],"termid":"MONDO:0002226","xrefs":{"Monarch":{"xref_id":"0002226"}}}


id: PR:Q10270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoadenosine phosphosulfate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00955","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.06","secondary_identifiers":["UniProtKB:Q10270"],"synonyms":[{"name":"3'-phosphoadenylylsulfate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAPS reductase, thioredoxin dependent (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAdoPS reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cysH","type":"exact"}],"termid":"PR:Q10270"}


id: GO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Leu-Xaa, Met-Xaa and Phe-Xaa. Hydrolyzes elastin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase II activity (obsolete GO:0004281)","synonyms":[{"name":"pancreatic elastase 2","type":"related"},{"name":"pancreatic elastase II activity","type":"exact"}],"termid":"GO:0004281"}


id: MONDO:0004972
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.","definition_xrefs":["NCIT:C2855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"adenoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:657","ICDO:8140/0","MESH:D000236","SCTID:443416007","EFO:0000232","UMLS:C0001430","MEDGEN:125"],"synonyms":[{"name":"acinar cell adenoma","type":"narrow"},{"name":"acinar cell adenoma (morphologic abnormality)","type":"narrow"},{"name":"acinic cell adenoma","type":"exact"},{"name":"adenoma","type":"exact"},{"name":"adenoma, benign","type":"narrow"},{"name":"adenomas","type":"exact"}],"termid":"MONDO:0004972","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0004972"}}}


id: PBO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin binding protein 2","termid":"PBO:0048575"}


id: MONDO:0018690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome characterized by an abnormally dilated pupil, hypoflexia, and diaphoresis. The syndrome is usually caused by a viral or bacterial infection. The abnormally dilated pupil is caused by damage to postganglionic parasympathetic fibers innervating the eye.","definition_xrefs":["NCIT:C34357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holmes-Adie syndrome","secondary_identifiers":["GARD:5749","EFO:0004126","NORD:735","SCTID:24225004","MEDGEN:138","UMLS:C0001519","DOID:11549","MESH:D000270","OMIM:103100","Orphanet:454718"],"synonyms":[{"name":"Adie Syndrome","type":"exact"},{"name":"Adie pupil","type":"exact"},{"name":"Adie syndrome","type":"exact"},{"name":"Adie's pupil","type":"exact"},{"name":"Adie's pupil or syndrome","type":"exact"},{"name":"Adie's pupil syndrome","type":"exact"},{"name":"Adie's syndrome","type":"exact"},{"name":"Holmes-Adie syndrome","type":"exact"},{"name":"poorly Reacting pupils","type":"related"},{"name":"tonic pupil","type":"exact"},{"name":"tonic pupil-tendon areflexia syndrome","type":"exact"},{"name":"tonic, sluggishly reacting pupil and hypoactive or absent tendon reflexes","type":"related"}],"termid":"MONDO:0018690","xrefs":{"Monarch":{"xref_id":"0018690"}}}


id: GO:1902695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of metallochaperone activity.","definition_xrefs":["GOC:TermGenie","PMID:10426947","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"metallochaperone complex","termid":"GO:1902695"}


id: GO:1901619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule as a result of deprivation of nitrogen.","definition_xrefs":["GOC:TermGenie","PMID:23074192"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA methylation in response to nitrogen starvation (obsolete GO:1901619)","termid":"GO:1901619"}


id: GO:0160249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through a UDP-glucose intermediate.","definition_xrefs":["MetaCyc:PWY-5067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycogen biosynthetic process via UDP-glucose","termid":"GO:0160249"}


id: PBO:0048475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2","termid":"PBO:0048475"}


id: PBO:0049291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 10, pseudogene","termid":"PBO:0049291"}


id: GO:0090076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of skeletal muscle tissue contraction is reduced. Muscle relaxation involves the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of skeletal muscle","termid":"GO:0090076"}


id: PBO:0075186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 3","termid":"PBO:0075186"}


id: PBO:0087172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit","termid":"PBO:0087172"}


id: FYPO:0000783
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000783","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:0008815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = acetate + oxaloacetate.","definition_xrefs":["RHEA:10760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"citrate (pro-3S)-lyase activity","secondary_identifiers":["MetaCyc:CITLY-RXN","KEGG_REACTION:R00362","EC:4.1.3.6"],"synonyms":[{"name":"citrase activity","type":"related"},{"name":"citratase activity","type":"related"},{"name":"citrate aldolase activity","type":"related"},{"name":"citrate lyase","type":"narrow"},{"name":"citrate lyase activity","type":"exact"},{"name":"citrate oxaloacetate-lyase [(pro-3S)-CH2COO-->acetate]","type":"related"},{"name":"citrate oxaloacetate-lyase activity","type":"related"},{"name":"citric aldolase activity","type":"related"},{"name":"citridesmolase activity","type":"related"},{"name":"citritase activity","type":"related"}],"termid":"GO:0008815"}


id: MONDO:0011434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 5, susceptibility to","secondary_identifiers":["OMIM:604316","UMLS:C1858536","MEDGEN:347660","DOID:0111282"],"synonyms":[{"name":"PSORS5","type":"exact"},{"name":"psoriasis 5, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 5","type":"exact"}],"termid":"MONDO:0011434","xrefs":{"Monarch":{"xref_id":"0011434"}}}


id: GO:0102252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n H2O + a cellodextrin = n beta-cellobiose, releasing cellobiose from the reducing ends of the chains.","definition_xrefs":["EC:3.2.1.176","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity (reducing end)","secondary_identifiers":["MetaCyc:RXN-12420"],"termid":"GO:0102252"}


id: PBO:0071321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 5","termid":"PBO:0071321"}


id: PBO:0052859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-2","termid":"PBO:0052859"}


id: PBO:0028741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_silver","termid":"PBO:0028741"}


id: FYPO:0005675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) after cells have been exposed to methyl methanesulfonate.","definition_xrefs":["PMID:27151298","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during vegetative growth","synonyms":[{"name":"normal protein deubiquitination during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein deubiquitination following cellular response to MMS","type":"exact"},{"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein deubiquitylation following cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005675"}


id: PBO:0041810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium regulated heat stable protein 1","termid":"PBO:0041810"}


id: MONDO:0700191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrosarcoma that occurs in a chicken.","definition_xrefs":["NCIT:C134557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken fibrosarcoma","termid":"MONDO:0700191","xrefs":{"Monarch":{"xref_id":"0700191"}}}


id: GO:0034595
data:
  {"annotated_genes":["SJAG_03375","SJAG_00063","SJAG_04545","SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[74068,74198,75377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[75380,74201,75847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the 5-phosphate group of a phosphatidylinositol phosphate.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_02289":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol phosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide 5-phosphatase activity","type":"exact"},{"name":"polyphosphoinositol lipid 5-phosphatase activity","type":"exact"}],"termid":"GO:0034595","terms_by_termid":{"GO:0004439":null,"GO:0034485":null,"GO:0043813":null}}


id: PBO:0046340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase family member 5","termid":"PBO:0046340"}


id: PBO:0087195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-binding protein required for 40S ribosomal subunit biogenesis; contains an RNA recognition motif (RRM); hydrophilin essential to overcome the stress of the desiccation-rehydration process; NOP6 may be a fungal-specific gene as no homologs have been yet identified in higher eukaryotes","termid":"PBO:0087195"}


id: SO:1001287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding signal that is found many hundreds of nucleotides 3' of a redefined stop codon.","direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distant_three_prime_recoding_signal","synonyms":[{"name":"distant three prime recoding signal","type":"exact"}],"termid":"SO:1001287"}


id: PR:O60077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat-containing zfs1 target protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.03","synonyms":[{"name":"Spom972h-arz1","type":"exact"}],"termid":"PR:O60077"}


id: PBO:0085700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in ribosome biogenesis; forms a nucleolar complex with Mak21p that binds to 90S and 66S pre-ribosomes; forms a nuclear complex with Noc3p that binds to 66S pre-ribosomes; both complexes mediate intranuclear transport of ribosomal precursors; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit","termid":"PBO:0085700"}


id: GO:0040001
data:
  {"annotated_genes":["SJAG_02651","SJAG_02737","SJAG_02695","SJAG_00140","SJAG_00594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97332,117336,105239,76714,104909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of the mitotic spindle to a specific location in the cell occurs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0000226","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"establishment of mitotic spindle localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030608","GO:0030610","GO:0018986","GO:0030605","GO:0030606"],"synonyms":[{"name":"establishment of mitotic spindle localisation","type":"exact"},{"name":"mitotic spindle positioning","type":"exact"},{"name":"mitotic spindle positioning and orientation","type":"narrow"},{"name":"mitotic spindle positioning or orientation","type":"exact"},{"name":"spindle positioning during mitosis","type":"related"},{"name":"spindle positioning involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0040001","terms_by_termid":{"GO:0000132":null}}


id: PBO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf1 (predicted)","termid":"PBO:0001663"}


id: PBO:0069904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1195, pseudogene","termid":"PBO:0069904"}


id: PBO:0039677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit sigma 1","termid":"PBO:0039677"}


id: PBO:0052030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JPX transcript, XIST activator","termid":"PBO:0052030"}


id: MONDO:0022946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness progressive cataract autosomal dominant","termid":"MONDO:0022946","xrefs":{"Monarch":{"xref_id":"0022946"}}}


id: PBO:0057939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3664","termid":"PBO:0057939"}


id: MONDO:0008918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine-acylcarnitine translocase (CACT) deficiency is a life-threatening, inherited disorder of fatty acid oxidation which usually presents in the neonatal period with severe hypoketotic hypoglycemia, hyperammonemia, cardiomyopathy and/or arrhythmia, hepatic dysfunction, skeletal muscle weakness, and encephalopathy.","definition_xrefs":["Orphanet:159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"carnitine-acylcarnitine translocase deficiency","secondary_identifiers":["NANDO:1200972","NANDO:2200511","SCTID:238003000","MEDGEN:91000","OMIM:212138","MESH:C562812","UMLS:C0342791","NCIT:C133086","icd11.foundation:677949122","GARD:1123","DOID:0111585"],"synonyms":[{"name":"CACT deficiency","type":"exact"},{"name":"CACTD","type":"related"},{"name":"CARNITINE-acylcarnitine translocase deficiency","type":"related"},{"name":"Cact deficiency","type":"related"},{"name":"carnitine-acylcarnitine translocase deficiency","type":"exact"}],"termid":"MONDO:0008918","xrefs":{"Monarch":{"xref_id":"0008918"}}}


id: MONDO:0007483
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86388],"is_not":false,"summary":null,"term":"MONDO:0007483"}]},"cv_name":"mondo","definition":"Acropigmentation of Dohi is a genodermatosis characterized by the presence of hyperpigmented and hypopigmented macules, principally located on the extremities and limbs.","definition_xrefs":["Orphanet:41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reticulate pigment disorder","termid":"MONDO:0000118"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"ADAR-related type 1 interferonopathy","termid":"MONDO:0700261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyschromatosis symmetrica hereditaria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C118435","OMIM:127400","GARD:334","DOID:0060257","SCTID:239085000","UMLS:C0406775","MEDGEN:96071","MESH:C535729"],"synonyms":[{"name":"DSH","type":"related"},{"name":"DSH1","type":"exact"},{"name":"RAD","type":"exact"},{"name":"acropigmentation of Dohi","type":"exact"},{"name":"dyschromatosis symmetrica hereditaria","type":"exact"},{"name":"dyschromatosis symmetrica hereditaria 1","type":"related"},{"name":"familial reticulate acropigmentation of Dohi","type":"related"},{"name":"reticulate acropigmentation of Dohi","type":"exact"},{"name":"symmetric dyschromatosis of the extremities","type":"related"}],"termid":"MONDO:0007483","terms_by_termid":{"MONDO:0007483":null},"xrefs":{"Monarch":{"xref_id":"0007483"}}}


id: GO:0016636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["EC:1.3.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016636"}


id: GO:0102224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-N,N'-diacetylbacillosamine + H2O = 2,4-diacetamido-2,4,6-trideoxy-alpha-D-mannopyranose + GDP + H+.","definition_xrefs":["RHEA:46316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"GDP-2,4-diacetamido-2,4,6-trideoxy-alpha-D-glucopyranose hydrolase/2-epimerase activity","secondary_identifiers":["MetaCyc:RXN-12236"],"termid":"GO:0102224"}


id: GO:0032532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the length of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus organization","termid":"GO:0032530"},{"relation_name":"is_a","term_name":"regulation of cell projection size","termid":"GO:0032536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microvillus length","termid":"GO:0032532"}


id: FYPO:0005429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G2 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G2 phase","synonyms":[{"name":"decreased UV-damage excision repair during G2 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G2 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0005429"}


id: GO:2000136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"}


id: FYPO:0004996
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}],"single_locus_phenotype":[{"annotations":[119622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to a specific location on a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":2,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abnormal protein localization to chromosome","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"abnormal protein localisation to chromosome","type":"exact"}],"termid":"FYPO:0004996","terms_by_termid":{"FYPO:0001132":null,"FYPO:0004718":null,"FYPO_EXT:0000001":null}}


id: GO:0034959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the attainment of the full functional capacity of endothelin by conversion of Big-endothelin substrate into mature endothelin.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"endothelin maturation","termid":"GO:0034959"}


id: PBO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 1","termid":"PBO:0060422"}


id: GO:0033481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate metabolic process","termid":"GO:0019586"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galacturonate biosynthetic process","synonyms":[{"name":"galacturonate anabolism","type":"exact"},{"name":"galacturonate biosynthesis","type":"exact"},{"name":"galacturonate formation","type":"exact"},{"name":"galacturonate synthesis","type":"exact"}],"termid":"GO:0033481"}


id: FYECO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lead ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Pb ions","synonyms":[{"name":"lead ions added","type":"exact"}],"termid":"FYECO:0000036"}


id: MONDO:0014732
data:
  {"annotated_genes":["SJAG_04966","SJAG_01772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86304,86305],"is_not":false,"summary":null,"term":"MONDO:0014732"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the VPS11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"VPS11-related neurological disorder","termid":"MONDO:0100617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01772":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:466934","GARD:17837","OMIM:616683","DOID:0060796","UMLS:C4225247","MEDGEN:905068"],"synonyms":[{"name":"HLD12","type":"exact"},{"name":"VPS11 leukodystrophy","type":"exact"},{"name":"VPS11-related autosomal recessive hypomyelinating leukodystrophy","type":"related"},{"name":"VPS11-related autosomal recessive hypomyelinating leukoencephalopathy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 12","type":"exact"},{"name":"leukodystrophy caused by mutation in VPS11","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 12","type":"exact"},{"name":"leukodystrophy, hypomyelinating, type 12","type":"exact"}],"termid":"MONDO:0014732","terms_by_termid":{"MONDO:0014732":null},"xrefs":{"Monarch":{"xref_id":"0014732"}}}


id: GO:0030994
data:
  {"annotated_genes":["SJAG_01774","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90090,100515],"is_not":false,"summary":null,"term":"GO:0030994"}]},"cv_name":"biological_process","definition":"Dissolution of the primary septum during cell separation.","definition_xrefs":["PMID:12665550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary cell septum disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrolysis of primary cell septum","type":"exact"},{"name":"primary cell septum hydrolysis","type":"exact"},{"name":"primary septum hydrolysis","type":"broad"}],"termid":"GO:0030994","terms_by_termid":{"GO:0030994":null}}


id: PBO:0068469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 46, pseudogene","termid":"PBO:0068469"}


id: GO:0004693
data:
  {"annotated_genes":["SJAG_03061","SJAG_03967","SJAG_00342","SJAG_03421","SJAG_01000","SJAG_01825","SJAG_00150","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58395,59087,71987,76627,78687,79855,79943,80456],"is_not":false,"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["PMID:7877684","GOC:rn","PMID:9841670","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase activity","termid":"GO:0097472"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01000":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0003674","GO:0140096","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2514854","Reactome:R-HSA-6805109","Reactome:R-HSA-69754","Reactome:R-HSA-69756","Reactome:R-HSA-4088024","Reactome:R-HSA-380278","Reactome:R-HSA-2294600","Reactome:R-HSA-174079","Reactome:R-HSA-68944","Reactome:R-HSA-180047","Reactome:R-HSA-2245218","Reactome:R-HSA-2220971","Reactome:R-HSA-2990882","Reactome:R-HSA-9008412","Reactome:R-HSA-187959","Reactome:R-HSA-2172183","Reactome:R-HSA-174122","Reactome:R-HSA-174132","Reactome:R-HSA-3788705","Reactome:R-HSA-5195402","Reactome:R-HSA-1912391","Reactome:R-HSA-2984220","Reactome:R-HSA-5244669","Reactome:R-HSA-1226094","Reactome:R-HSA-2468287","Reactome:R-HSA-187916","Reactome:R-HSA-188390","Reactome:R-HSA-174251","Reactome:R-HSA-9009282","Reactome:R-HSA-187948","GO:0016537","Reactome:R-HSA-2430533","Reactome:R-HSA-1226095","Reactome:R-HSA-6797606","Reactome:R-HSA-9624800","Reactome:R-HSA-5692755","Reactome:R-HSA-2468293","Reactome:R-HSA-187520","Reactome:R-HSA-4086410","Reactome:R-HSA-69005","Reactome:R-HSA-6793661","Reactome:R-HSA-69227","Reactome:R-HSA-9686521","EC:2.7.11.22"],"synonyms":[{"name":"ATP:cyclin phosphotransferase activity","type":"related"},{"name":"CDK","type":"related"},{"name":"CDK activity","type":"exact"},{"name":"CDK, catalytic subunit activity","type":"exact"},{"name":"Cdk-activating protein kinase activity","type":"related"},{"name":"D-type cyclin kinase activity","type":"narrow"},{"name":"cdc2 kinase activity","type":"narrow"},{"name":"cdk-activating kinase activity","type":"related"},{"name":"cyclin D-cdk6 kinase activity","type":"narrow"},{"name":"cyclin D-dependent kinase activity","type":"narrow"},{"name":"cyclin E kinase activity","type":"narrow"},{"name":"cyclin-A associated kinase activity","type":"narrow"},{"name":"cyclin-dependent kinase 6 activity","type":"narrow"},{"name":"cyclin-dependent kinase activity","type":"broad"},{"name":"cyclin-dependent kinase-2 activity","type":"narrow"},{"name":"cyclin-dependent kinase-4 activity","type":"narrow"},{"name":"cyclin-dependent protein kinase activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"neuronal cdc2-like kinase activity","type":"narrow"}],"termid":"GO:0004693","terms_by_termid":{"GO:0004693":null}}


id: GO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region where the mating projection meets the bulk of the cell, in unicellular fungi exposed to mating pheromone.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection base","synonyms":[{"name":"base of shmoo tip","type":"narrow"},{"name":"conjugation tube base","type":"narrow"}],"termid":"GO:0001400"}


id: PBO:0069704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 984, pseudogene","termid":"PBO:0069704"}


id: PBO:0059943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 29","termid":"PBO:0059943"}


id: GO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"positively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair placode formation","termid":"GO:0061169"}


id: PBO:0111903
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0111903"}


id: PBO:0078478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 2-1","termid":"PBO:0078478"}


id: PBO:0060190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 8","termid":"PBO:0060190"}


id: MONDO:0007226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-nystagmus-cerebellar ataxia syndrome is characterized by brachydactyly, nystagmus and cerebellar ataxia. Intellectual deficit and strabismus are also reported in some patients.","definition_xrefs":["Orphanet:1246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-nystagmus-cerebellar ataxia syndrome","secondary_identifiers":["GARD:971","UMLS:C1862099","MEDGEN:350589","ICD9:759.89","OMIM:113400","SCTID:205828009","MESH:C566192"],"synonyms":[{"name":"Biemond syndrome","type":"exact"},{"name":"Biemond syndrome type 1","type":"related"},{"name":"brachydactyly - nystagmus - cerebellar ataxia","type":"related"},{"name":"brachydactyly, nystagmus and cerebellar ataxia","type":"related"},{"name":"brachydactyly-NYSTAGMUS-cerebellar ataxia","type":"related"}],"termid":"MONDO:0007226","xrefs":{"Monarch":{"xref_id":"0007226"}}}


id: FYPO:0001069
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119658,119659,119657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more mitotic cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of cell cycle phase","termid":"FYPO:0000408"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased duration of mitotic cell cycle phase during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle phase","type":"exact"}],"termid":"FYPO:0001069","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 25","termid":"PBO:0071302"}


id: PATO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 90 degrees to another entity.","definition_xrefs":["thesaurus.math:thesaurus.math"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right angle to","termid":"PATO:0001321"}


id: MONDO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast lower-outer quadrant cancer","secondary_identifiers":["MEDGEN:509327","UMLS:C0153553","ICD9:174.5","SCTID:188155002","DOID:13972"],"synonyms":[{"name":"malignant neoplasm of lower-outer quadrant of female breast","type":"exact"}],"termid":"MONDO:0001850","xrefs":{"Monarch":{"xref_id":"0001850"}}}


id: PBO:0073960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 9","termid":"PBO:0073960"}


id: PBO:0052019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 8","termid":"PBO:0052019"}


id: PBO:0030055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_adenylyl_cyclase_activity","termid":"PBO:0030055"}


id: PBO:0084899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transporter; major substrates are adenosine 5'-phosphosulfate (APS) and 3'-phospho-adenosine 5'-phosphosulfate (PAPS); member of the mitochondrial carrier family; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084899"}


id: GO:0034807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + C1 unit = hydroxymethoxybenzo(a)pyrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene methyltransferase activity (obsolete GO:0034807)","termid":"GO:0034807"}


id: PBO:0051200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-4","termid":"PBO:0051200"}


id: GO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of organic substances into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore. An organic substance is a molecular entity that contains carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance transport (obsolete GO:0071702)","termid":"GO:0071702"}


id: FYPO:0004481
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119908,119920],"is_not":false,"summary":null,"term":"FYPO:0004481"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow at high temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"abolished cell population growth at high temperature","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta","sty1delta"],"synonyms":[{"name":"abolished cell population growth at high temperature during mitotic cell cycle","type":"related"},{"name":"abolished growth at high temperature","type":"broad"},{"name":"abolished vegetative cell population growth at high temperature","type":"exact"},{"name":"cell population growth at high temperature abolished","type":"exact"},{"name":"heat sensitive","type":"related"},{"name":"hypersensitive to high temperature","type":"related"},{"name":"sensitive to heat","type":"related"},{"name":"sensitive to high temperature","type":"related"},{"name":"sensitive to high temperature during vegetative growth","type":"related"},{"name":"temperature sensitive","type":"related"}],"termid":"FYPO:0004481","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0004481":null}}


id: PBO:0065755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase, muscle associated","termid":"PBO:0065755"}


id: MONDO:0022357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital acardia","secondary_identifiers":["ICD9:759.89","SCTID:205834002","MEDGEN:91032","GARD:9823","UMLS:C0344580"],"synonyms":[{"name":"acardia","type":"exact"},{"name":"congenital absence of the heart","type":"related"}],"termid":"MONDO:0022357","xrefs":{"Monarch":{"xref_id":"0022357"}}}


id: PBO:0057293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 511","termid":"PBO:0057293"}


id: GO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrokinin and transmitting the signal within the cell to induce a change in cell activity. Pyrokinins are a group of insect neuropeptides that share the common C-terminal pentapeptide sequence Phe-X-Pro-Arg-Leu-NH2 (X = S, T, K, A, or G). They play a central role in diverse physiological processes including stimulation of gut motility, production and release of sex pheromones, diapause, and pupariation.","definition_xrefs":["PMID:19186060","PMID:12951076","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"pyrokinin receptor activity","synonyms":[{"name":"PK receptor activity","type":"exact"}],"termid":"GO:0036401"}


id: GO:0045056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"transcytosis","secondary_identifiers":["Wikipedia:Transcytosis"],"termid":"GO:0045056"}


id: PBO:0031018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_cell_cycle_phase_transition","termid":"PBO:0031018"}


id: PBO:0003370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human MAPK organizer 1 (MORG1) family (predicted)","termid":"PBO:0003370"}


id: PBO:0072510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 39","termid":"PBO:0072510"}


id: PBO:0088943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhoD-like superfamily","termid":"PBO:0088943"}


id: MONDO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"marginal corneal ulcer","secondary_identifiers":["MEDGEN:509765","SCTID:47398006","UMLS:C0155067","ICD9:370.01","DOID:10441","icd11.foundation:2035123281"],"termid":"MONDO:0001034","xrefs":{"Monarch":{"xref_id":"0001034"}}}


id: PBO:0056348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 6","termid":"PBO:0056348"}


id: GO:0047483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-alpha-D-ribose 1-diphosphate + ATP + H2O + imidazol-4-ylacetate = 1-(5-phosphoribosyl)imidazol-4-ylacetate + ADP + diphosphate + 2 H+ + phosphate.","definition_xrefs":["RHEA:16485","EC:6.3.4.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"imidazoleacetate-phosphoribosyldiphosphate ligase activity","secondary_identifiers":["MetaCyc:6.3.4.8-RXN","KEGG_REACTION:R04068"],"synonyms":[{"name":"5-phosphoribosylimidazoleacetate synthetase activity","type":"related"},{"name":"imidazoleacetate:5-phosphoribosyl-diphosphate ligase (ADP- and diphosphate-forming)","type":"related"}],"termid":"GO:0047483"}


id: MONDO:0100147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic intellectual disability disorder that is characterized by significant neurodevelopmental disabilities with limited to absent speech, behavioral issues, and craniofacial anomalies. Most distinctive features are neurodevelopmental with invariably severely limited speech, cleft or high arched palate, dental anomalies (crowding, macrodontia, abnormal shape), and behavioral issues with or without bone or brain anomalies.","definition_xrefs":["PMID:29436146","PMID:31021519","PMID:17377962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"SATB2 associated disorder","secondary_identifiers":["GARD:22326","Orphanet:576278"],"synonyms":[{"name":"SAS","type":"exact"},{"name":"SATB2 associated disorder","type":"exact"},{"name":"SATB2-associated syndrome","type":"exact"}],"termid":"MONDO:0100147","xrefs":{"Monarch":{"xref_id":"0100147"}}}


id: PBO:0112880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydrolipoamide dehydrogenase (e3 component of oxoglutarate dehydrogenase complex) Dld1","termid":"PBO:0112880"}


id: MONDO:0018226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile epileptic-dyskinetic encephalopathy is a monogenic disease with epilepsy characterized by developmental delay and infantile spasms in the first months of life, followed by chorea and generalized dystonia and progressing to quadriplegic dyskinesia, recurrent status dystonicus, intractable focal epilepsy and severe intellectual disability.","definition_xrefs":["Orphanet:364063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete ARX-related epileptic encephalopathy (obsolete MONDO:0015921)","termid":"MONDO:0015921"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"infantile epileptic-dyskinetic encephalopathy","secondary_identifiers":["UMLS:C4552072","MEDGEN:1637882","GARD:17582","MESH:C567924"],"termid":"MONDO:0018226","xrefs":{"Monarch":{"xref_id":"0018226"}}}


id: PBO:0054534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1934","termid":"PBO:0054534"}


id: MONDO:0009921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly-postaxial polydactyly syndrome associates, in chromosomally normal neonates, holoprosencephaly, severe facial dysmorphism, postaxial polydactyly and other congenital abnormalities, suggestive of trisomy 13.","definition_xrefs":["Orphanet:2166"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly-postaxial polydactyly syndrome","secondary_identifiers":["NCIT:C125418","OMIM:264480","SCTID:716091000","UMLS:C1849649","GARD:344","MEDGEN:340382","MESH:C535829"],"synonyms":[{"name":"PSEUDOTRISOMY 13 syndrome","type":"related"},{"name":"Young-Maders syndrome","type":"related"},{"name":"holoprosencephaly polydactyly syndrome","type":"related"},{"name":"holoprosencephaly-polydactyly syndrome","type":"related"},{"name":"pseudo trisomy 13 syndrome","type":"related"},{"name":"pseudo-trisomy 13 syndrome","type":"exact"}],"termid":"MONDO:0009921","xrefs":{"Monarch":{"xref_id":"0009921"}}}


id: MONDO:0016520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Klippel-Feil Syndrome is characterized by improper segmentation of cervical segments resulting in congenitally fused cervical vertebrae.","definition_xrefs":["Orphanet:2345"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated Klippel-Feil syndrome (obsolete MONDO:0016520)","synonyms":[{"name":"Klippel-Feil malformation","type":"exact"},{"name":"Klippel-Feil sequence","type":"exact"},{"name":"congenital cervical vertebral fusion","type":"exact"},{"name":"congenital fused cervical segments","type":"exact"},{"name":"nonsyndromic Klippel-Feil syndrome","type":"exact"}],"termid":"MONDO:0016520","xrefs":{"Monarch":{"xref_id":"0016520"}}}


id: PBO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 5","termid":"PBO:0070448"}


id: MONDO:0850449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute biphenotypic leukemia that is characterized by blasts that also carry the translocation t(9;22)(q34.1;q11.2) by karyotypic analysis or the BCR-ABL1 translocation by FISH or PCR.","definition_xrefs":["DOID:0081036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute biphenotypic leukemia","termid":"MONDO:0020322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"mixed phenotype acute leukemia with BCR-ABL1","termid":"MONDO:0850449","xrefs":{"Monarch":{"xref_id":"0850449"}}}


id: PBO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously expressed prefoldin like chaperone","termid":"PBO:0080118"}


id: MONDO:1012730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital malformation syndrome presenting with unilateral craniofacial abnormalities that occurs in cats.","definition_xrefs":["PMID:22610383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemifacial microsomia, domestic cat","secondary_identifiers":["OMIA:001690-9685"],"synonyms":[{"name":"type III hemifacial microsomia, domestic cat","type":"related"}],"termid":"MONDO:1012730","xrefs":{"Monarch":{"xref_id":"1012730"}}}


id: PBO:0003168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit (predicted)","termid":"PBO:0003168"}


id: PBO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 40","termid":"PBO:0050130"}


id: PBO:0063973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 7","termid":"PBO:0063973"}


id: MONDO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy due to drug","secondary_identifiers":["SCTID:7339009","DOID:14184","UMLS:C0154762","MEDGEN:509649","ICD9:357.6"],"termid":"MONDO:0001904","xrefs":{"Monarch":{"xref_id":"0001904"}}}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: GO:0048648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to environmental and/or genetic cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination","termid":"GO:0048648"}


id: GO:0061457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from the mesonephros to the male gonad, contributing to its development.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric cell migration involved in male gonad development","termid":"GO:0061457"}


id: RO:HOM0000024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a duplication preceding a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_out-paralogy_relationship_with","synonyms":[{"name":"alloparalogy","type":"exact"},{"name":"out-paralogous to","type":"exact"},{"name":"outparalogy","type":"exact"}],"termid":"RO:HOM0000024"}


id: GO:0050982
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108827],"is_not":false,"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events by which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0050982","terms_by_termid":{"GO:0050982":null}}


id: RO:HOM0000001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that results from common evolutionary origin.","direct_ancestors":[{"relation_name":"is_a","term_name":"shares_ancestor_with","termid":"RO:0002158"},{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homology_relationship_with","synonyms":[{"name":"homologous to","type":"exact"}],"termid":"RO:HOM0000001"}


id: PBO:0066324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RC3H1 divergent transcript","termid":"PBO:0066324"}


id: MONDO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinopathy (obsolete MONDO:0000149)","termid":"MONDO:0000149","xrefs":{"Monarch":{"xref_id":"0000149"}}}


id: GO:0016834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for carbon-carbon lyases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-carbon lyase activity (obsolete GO:0016834)","synonyms":[{"name":"other carbon-carbon lyase activity","type":"exact"}],"termid":"GO:0016834"}


id: GO:0032650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050721","GO:0050705"],"synonyms":[{"name":"regulation of IL-1 alpha production","type":"exact"},{"name":"regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032650"}


id: PBO:0044940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHCR24 divergent transcript","termid":"PBO:0044940"}


id: PBO:0036550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi rhomboid protease Rbd2","termid":"PBO:0036550"}


id: PBO:0045478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin related protein 2","termid":"PBO:0045478"}


id: GO:0015098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of molybdate (MoO4 2-) ions from one side of a membrane to the other. Molybdate is the bivalent anion derived from molybdic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"molybdate ion transmembrane transporter activity","synonyms":[{"name":"molybdate transporter activity","type":"exact"}],"termid":"GO:0015098"}


id: GO:0097375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal sensory neuron is a sensory neuron that project to the spinal cord.","definition_xrefs":["GOC:pr","CL:0009000","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal sensory neuron axon guidance","termid":"GO:0097375"}


id: MONDO:0020209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hyperopia and astigmatism (obsolete MONDO:0020209)","secondary_identifiers":["Orphanet:98621"],"termid":"MONDO:0020209","xrefs":{"Monarch":{"xref_id":"0020209"}}}


id: GO:0016607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.","definition_xrefs":["PMID:28977640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"nuclear speck","synonyms":[{"name":"nuclear speckle","type":"exact"},{"name":"nuclear speckles","type":"exact"},{"name":"speckle domain","type":"narrow"},{"name":"speckle focus","type":"related"},{"name":"splicing speckle","type":"exact"}],"termid":"GO:0016607"}


id: GO:0045012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A major histocompatibility complex class II receptor. These display processed antigens from virally-infected or transformed cells. Class-II-positive cells ('antigen-presenting cells') can take up antigens from outside by endocytosis, degrade them into small peptides, and re-export the peptides (now bound to MHC class II protein) to the cell surface. These peptide-MHC class II complexes can then be recognized by specific CD4+ lymphocytes.","definition_xrefs":["ISBN:0879694971","ISBN:081533642X"],"gene_count":0,"genotype_count":0,"name":"obsolete MHC class II receptor activity (obsolete GO:0045012)","synonyms":[{"name":"MHC class II receptor activity","type":"exact"},{"name":"class II major histocompatibility complex antigen","type":"related"},{"name":"major histocompatibility complex class II receptor","type":"exact"}],"termid":"GO:0045012"}


id: GO:1905430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:18984164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glycine","termid":"GO:1905429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glycine","synonyms":[{"name":"cellular response to Gly","type":"exact"},{"name":"cellular response to aminoacetic acid","type":"exact"},{"name":"cellular response to aminoethanoic acid","type":"exact"},{"name":"cellular response to glycin","type":"exact"}],"termid":"GO:1905430"}


id: GO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation","synonyms":[{"name":"activation of mesenchymal cell proliferation","type":"narrow"},{"name":"stimulation of mesenchymal cell proliferation","type":"narrow"},{"name":"up regulation of mesenchymal cell proliferation","type":"exact"},{"name":"up-regulation of mesenchymal cell proliferation","type":"exact"},{"name":"upregulation of mesenchymal cell proliferation","type":"exact"}],"termid":"GO:0002053"}


id: PBO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD27 antisense RNA 1","termid":"PBO:0042313"}


id: PBO:0045214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C7","termid":"PBO:0045214"}


id: PBO:0071288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 11","termid":"PBO:0071288"}


id: PBO:0004983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene (predicted)","termid":"PBO:0004983"}


id: PBO:0059316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L55","termid":"PBO:0059316"}


id: PR:Q9UTA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C25B8.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.12c","synonyms":[{"name":"Spom972h-SPAC25B8.12c","type":"exact"}],"termid":"PR:Q9UTA6"}


id: GO:1901024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyphenylacetate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"4-hydroxyphenylacetate metabolic process","termid":"GO:1901022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyphenylacetate biosynthetic process","synonyms":[{"name":"4-hydroxyphenylacetate anabolism","type":"exact"},{"name":"4-hydroxyphenylacetate biosynthesis","type":"exact"},{"name":"4-hydroxyphenylacetate formation","type":"exact"},{"name":"4-hydroxyphenylacetate synthesis","type":"exact"}],"termid":"GO:1901024"}


id: PBO:0077316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 52","termid":"PBO:0077316"}


id: PR:000027715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spi1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:18422602","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1","synonyms":[{"name":"SPI1","type":"related"},{"name":"spi1","type":"exact"}],"termid":"PR:000027715"}


id: PBO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho2","termid":"PBO:0048215"}


id: MONDO:0011707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial dyskinesia and facial myokymia (obsolete MONDO:0011707)","termid":"MONDO:0011707","xrefs":{"Monarch":{"xref_id":"0011707"}}}


id: MONDO:0033558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation, immune dysregulation, and eosinophilia","secondary_identifiers":["UMLS:C5436572","OMIM:618999","MEDGEN:1750270"],"synonyms":[{"name":"AIIDE","type":"related"},{"name":"AUTOINFLAMMATION, IMMUNE DYSREGULATION, AND EOSINOPHILIA","type":"related"},{"name":"Atopic Dermatitis, Enteritis, Colitis, and Eosinophilia","type":"related"}],"termid":"MONDO:0033558","xrefs":{"Monarch":{"xref_id":"0033558"}}}


id: GO:0043907
data:
  {"annotated_genes":["SJAG_01259"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106301],"is_not":false,"summary":null,"term":"GO:0043907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-tRNA(Pro) + H2O = tRNA(Pro) + L-cysteine + H+.","definition_xrefs":["RHEA:25351","PMID:15886196","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"Cys-tRNA(Pro) deacylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.n2"],"synonyms":[{"name":"Cys-tRNA(Pro) deacetylase activity","type":"exact"},{"name":"Cys-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043907","terms_by_termid":{"GO:0043907":null}}


id: PBO:0077169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2","termid":"PBO:0077169"}


id: PBO:0061967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AG member 1","termid":"PBO:0061967"}


id: PBO:0056362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6","termid":"PBO:0056362"}


id: PR:O43081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC947.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C947.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.06c","synonyms":[{"name":"Spom972h-SPBC947.06c","type":"exact"}],"termid":"PR:O43081"}


id: FYECO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cobalt chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CoCl2","synonyms":[{"name":"+ cobalt chloride","type":"exact"}],"termid":"FYECO:0000311"}


id: PBO:0083389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps HRT1, a verified gene that encodes an SCF ubiquitin ligase subunit","termid":"PBO:0083389"}


id: PBO:0109401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 28, pseudogene","termid":"PBO:0109401"}


id: MONDO:0020319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloblastic leukemia without maturation (obsolete MONDO:0020319)","termid":"MONDO:0020319","xrefs":{"Monarch":{"xref_id":"0020319"}}}


id: MONDO:0002984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cutaneous lesion composed of eosinophilic histiocytes, which are often multinucleated. The lesions are yellow-brown papules affecting any part of the body. Patients are usually adult men. The prognosis is excellent. -- 2003","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytosis","termid":"MONDO:0002637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"reticulohistiocytic granuloma","secondary_identifiers":["SCTID:404162004","MEDGEN:48431","ICD9:277.89","UMLS:C0035290","DOID:4394","MESH:D015616","NCIT:C3356"],"synonyms":[{"name":"Reticulohistiocytoma","type":"exact"},{"name":"reticulohistiocytic granuloma (morphologic abnormality)","type":"exact"},{"name":"solitary Reticulohistiocytoma","type":"exact"},{"name":"solitary histiocytoma","type":"related"},{"name":"solitary reticulohistiocytoma","type":"exact"},{"name":"solitary reticulohistiocytosis","type":"related"}],"termid":"MONDO:0002984","xrefs":{"Monarch":{"xref_id":"0002984"}}}


id: GO:0007338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The union of male and female gametes to form a zygote.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single fertilization","secondary_identifiers":["Reactome:R-HSA-1187000"],"synonyms":[{"name":"zygote biosynthesis","type":"related"},{"name":"zygote formation","type":"related"}],"termid":"GO:0007338"}


id: MONDO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic progeroid syndrome (obsolete MONDO:0031689)","secondary_identifiers":["Orphanet:363245","ICD10CM:E34.8"],"termid":"MONDO:0031689","xrefs":{"Monarch":{"xref_id":"0031689"}}}


id: MONDO:1012412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 polysaccharide storage myopathy, non-human animal","termid":"MONDO:1011801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 polysaccharide storage myopathy, horse","secondary_identifiers":["OMIA:001537-9796"],"termid":"MONDO:1012412","xrefs":{"Monarch":{"xref_id":"1012412"}}}


id: MONDO:0005341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most frequently seen skin cancer. It arises from basal cells of the epidermis and pilosebaceous units. Clinically it is divided into the following types: nodular, ulcerative, superficial, multicentric, erythematous, and sclerosing or morphea-like. More than 95% of these carcinomas occur in patients over 40. They develop on hair-bearing skin, most commonly on sun-exposed areas. Approximately 85% are found on the head and neck and the remaining 15% on the trunk and extremities. Basal cell carcinoma usually grows in a slow and indolent fashion. However, if untreated, the tumor may invade the subcutaneous fat, skeletal muscle and bone. Distant metastases are rare. Excision, curettage and irradiation cure most basal cell carcinomas.","definition_xrefs":["NCIT:C2921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"basal cell carcinoma","termid":"MONDO:0020804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin basal cell carcinoma","secondary_identifiers":["CSP:2000-2719","HP:0002671","ICDO:8090/3","ONCOTREE:BCC","DOID:2513","MEDGEN:1648304","SCTID:254701007","UMLS:C4721806"],"synonyms":[{"name":"BCC","type":"broad"},{"name":"basal cell cancer","type":"broad"},{"name":"basal cell carcinoma","type":"broad"},{"name":"basal cell carcinoma of skin","type":"exact"},{"name":"basal cell carcinoma of the skin","type":"exact"},{"name":"basal cell epithelioma","type":"exact"},{"name":"basal cell skin carcinoma","type":"exact"},{"name":"basal cell tumor","type":"broad"},{"name":"basal cell tumour","type":"broad"},{"name":"basal cell tumour (morphologic abnormality)","type":"broad"},{"name":"epithelioma basal cell","type":"related"},{"name":"malignant basal cell tumour","type":"broad"},{"name":"malignant basal cell tumour (morphologic abnormality)","type":"broad"},{"name":"skin basal cell cancer","type":"exact"},{"name":"skin basal cell carcinoma","type":"exact"}],"termid":"MONDO:0005341","xrefs":{"Monarch":{"xref_id":"0005341"}}}


id: PBO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1","termid":"PBO:0051088"}


id: PBO:0089651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein (RNP) complex Utp502","termid":"PBO:0089651"}


id: PBO:0044906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DET1 partner of COP1 E3 ubiquitin ligase","termid":"PBO:0044906"}


id: GO:0019097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial small ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm mitochondrial rRNA localization","termid":"GO:0019095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"pole plasm mitochondrial srRNA localization","secondary_identifiers":["GO:0048119"],"synonyms":[{"name":"establishment and maintenance of mitochondrial localization in pole plasm","type":"exact"},{"name":"oocyte pole plasm mitochondrial srRNA localization","type":"exact"},{"name":"pole plasm mitochondrial srRNA localisation","type":"exact"}],"termid":"GO:0019097"}


id: PBO:0089721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation inhibitor","termid":"PBO:0089721"}


id: FYPO:0007534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the threonine residue at position 4 the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["PMID:30282034","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD threonine 4 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0007534"}


id: PR:O60062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met6 gene.","definition_xrefs":["UniProtKB:O60062","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.11","synonyms":[{"name":"Spom972h-met6","type":"exact"},{"name":"homoserine O-trans-acetylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60062"}


id: PBO:0030101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_histidine_level","termid":"PBO:0030101"}


id: MONDO:0034926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with entropion (obsolete MONDO:0034926)","secondary_identifiers":["Orphanet:519270"],"termid":"MONDO:0034926","xrefs":{"Monarch":{"xref_id":"0034926"}}}


id: GO:0006661
data:
  {"annotated_genes":["SJAG_00999","SJAG_01863","SJAG_04165","SJAG_00295","SJAG_02913","SJAG_02289","SJAG_04337","SJAG_02523","SJAG_00053","SJAG_05278","SJAG_04930","SJAG_01148","SJAG_03170","SJAG_04119","SJAG_02613","SJAG_02488","SJAG_03801","SJAG_03066","SJAG_06383","SJAG_05327","SJAG_01227","SJAG_04975","SJAG_03131","SJAG_03292","SJAG_02804","SJAG_02321","SJAG_03506","SJAG_00846","SJAG_06425","SJAG_01860","SJAG_00114","SJAG_00068","SJAG_01416","SJAG_03672","SJAG_04537","SJAG_01570","SJAG_04545","SJAG_00296","SJAG_01571","SJAG_01236","SJAG_00063","SJAG_01876","SJAG_03878","SJAG_03115","SJAG_02776","SJAG_00831","SJAG_04924","SJAG_05330","SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76961,80618,92993,117398,119217],"is_not":false,"summary":null,"term":"GO:0006661"},{"annotations":[92202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[104074,72213,58367,58357,60813,70238,73517,73890,57895,75934,77526,78598,104136,73110,75905,75339,63789,58253,78263,93356,78237,76832,63395,77847,77855,62740,87787,89910,78024,76816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[90768,104741],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[91576,111520,93585,97053,111645,118858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[61838,71829,63370,61686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[117924],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00068":null,"SJAG_00114":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00999":null,"SJAG_01148":null,"SJAG_01227":null,"SJAG_01236":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01860":null,"SJAG_01863":null,"SJAG_01876":null,"SJAG_02289":null,"SJAG_02321":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02613":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03131":null,"SJAG_03170":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04930":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1660499","Reactome:R-HSA-1660516","Reactome:R-HSA-1483226","Reactome:R-HSA-1660514","GO:0046489","Reactome:R-HSA-1483248","Reactome:R-HSA-1660517"],"synonyms":[{"name":"PtdIns biosynthesis","type":"exact"},{"name":"PtdIns biosynthetic process","type":"exact"},{"name":"phosphatidylinositol anabolism","type":"exact"},{"name":"phosphatidylinositol biosynthesis","type":"exact"},{"name":"phosphatidylinositol formation","type":"exact"},{"name":"phosphatidylinositol synthesis","type":"exact"},{"name":"phosphoinositide biosynthesis","type":"exact"},{"name":"phosphoinositide biosynthetic process","type":"exact"}],"termid":"GO:0006661","terms_by_termid":{"GO:0006506":null,"GO:0006661":null,"GO:0036092":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PBO:0061186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Ser (TGA) 1-1","termid":"PBO:0061186"}


id: PBO:0048244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12E","termid":"PBO:0048244"}


id: MONDO:0016479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 7","termid":"MONDO:0016944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver-Russell syndrome due to 7p11.2p13 microduplication","secondary_identifiers":["UMLS:C5679840","GARD:20603","Orphanet:231137","MEDGEN:1826059"],"synonyms":[{"name":"Silver-Russell syndrome due to 7p11.2-p13 microduplication","type":"exact"},{"name":"Silver-Russell syndrome due to dup(7)(p11.2p13)","type":"exact"},{"name":"Silver-Russell syndrome due to trisomy 7p11.2-p13","type":"exact"},{"name":"Silver-Russell syndrome due to trisomy 7p11.2p13","type":"exact"}],"termid":"MONDO:0016479","xrefs":{"Monarch":{"xref_id":"0016479"}}}


id: PBO:0061885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer mitochondrial membrane lipid metabolism regulator OPA3","termid":"PBO:0061885"}


id: MONDO:0000786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus domestica.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete plum allergy (obsolete MONDO:0000786)","secondary_identifiers":["DOID:0060511"],"synonyms":[{"name":"Prunus domestica allergic disease","type":"exact"},{"name":"Prunus domestica caused allergic disease","type":"exact"},{"name":"Prunus domestica fruit allergy","type":"exact"},{"name":"allergy of Prunus domestica","type":"exact"}],"termid":"MONDO:0000786","xrefs":{"Monarch":{"xref_id":"0000786"}}}


id: MONDO:0013440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2P (LGMD2P) is a form of limb-girdle muscular dystrophy characterized by slowly-progressive mainly proximal muscle weakness presenting in early childhood (with difficulties walking and climbing stairs) and mild to severe intellectual disability. Additional manifestations reported include microcephaly, mild increase in thigh or calf muscles, and contractures of the ankles.","definition_xrefs":["Orphanet:280333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type C","termid":"MONDO:0000173"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0024322","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2P","secondary_identifiers":["DOID:0110293","GARD:12541","MEDGEN:1386785","UMLS:C4511963","OMIM:613818"],"synonyms":[{"name":"DAG1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2P","type":"exact"},{"name":"MDDGC9","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in DAG1","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2P","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 2P","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C9","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 9","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy limb-girdle DAG1-related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, limb-girdle, Dag1-related","type":"related"}],"termid":"MONDO:0013440","xrefs":{"Monarch":{"xref_id":"0013440"}}}


id: PBO:0091146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC12C2.01c ortholog, syntenic position","termid":"PBO:0091146"}


id: GO:1903787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"negatively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione biosynthetic process","synonyms":[{"name":"down regulation of glutathione anabolism","type":"exact"},{"name":"down regulation of glutathione biosynthesis","type":"exact"},{"name":"down regulation of glutathione biosynthetic process","type":"exact"},{"name":"down regulation of glutathione formation","type":"exact"},{"name":"down regulation of glutathione synthesis","type":"exact"},{"name":"down-regulation of glutathione anabolism","type":"exact"},{"name":"down-regulation of glutathione biosynthesis","type":"exact"},{"name":"down-regulation of glutathione biosynthetic process","type":"exact"},{"name":"down-regulation of glutathione formation","type":"exact"},{"name":"down-regulation of glutathione synthesis","type":"exact"},{"name":"downregulation of glutathione anabolism","type":"exact"},{"name":"downregulation of glutathione biosynthesis","type":"exact"},{"name":"downregulation of glutathione biosynthetic process","type":"exact"},{"name":"downregulation of glutathione formation","type":"exact"},{"name":"downregulation of glutathione synthesis","type":"exact"},{"name":"inhibition of glutathione anabolism","type":"narrow"},{"name":"inhibition of glutathione biosynthesis","type":"narrow"},{"name":"inhibition of glutathione biosynthetic process","type":"narrow"},{"name":"inhibition of glutathione formation","type":"narrow"},{"name":"inhibition of glutathione synthesis","type":"narrow"},{"name":"negative regulation of glutathione anabolism","type":"exact"},{"name":"negative regulation of glutathione biosynthesis","type":"exact"},{"name":"negative regulation of glutathione formation","type":"exact"},{"name":"negative regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903787"}


id: PBO:0041794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping actin protein of muscle Z-line subunit alpha 3","termid":"PBO:0041794"}


id: PBO:0077661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10b","termid":"PBO:0077661"}


id: GO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a myeloid leukocyte.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte mediated immunity","synonyms":[{"name":"myeloid leucocyte immune effector process","type":"exact"},{"name":"myeloid leucocyte mediated immunity","type":"exact"},{"name":"myeloid leukocyte immune effector process","type":"exact"}],"termid":"GO:0002444"}


id: GO:0010544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet activation","termid":"GO:0010544"}


id: PATO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling wood.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/ligneous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligneous","termid":"PATO:0002348"}


id: FYPO:0003966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to salt stress","synonyms":[{"name":"increased protein accumulation during cellular response to salt stress","type":"related"},{"name":"increased protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003966"}


id: MONDO:1012372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive ataxia with head tremor and seizures, non-human animal","termid":"MONDO:1011875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia with head tremor and seizures, dog","secondary_identifiers":["OMIA:001363-9615"],"termid":"MONDO:1012372","xrefs":{"Monarch":{"xref_id":"1012372"}}}


id: GO:0032525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the rostro-caudal axis of a somite, prior to the morphological formation of a somite boundary.","definition_xrefs":["GOC:bf","PMID:16326386","PMID:17360776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"anterior/posterior axis specification","termid":"GO:0009948"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite rostral/caudal axis specification","synonyms":[{"name":"somite rostrocaudal axis specification","type":"exact"},{"name":"somite rostrocaudal polarity","type":"related"}],"termid":"GO:0032525"}


id: PBO:0085994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for viability in rich media of cells lacking mitochondrial DNA; mutants have an invasive growth defect with elongated morphology; induced by amino acid starvation; ICY1 has a paralog, ATG41, that arose from the whole genome duplication","termid":"PBO:0085994"}


id: PR:Q9USU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIA subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02933","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIA large subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.09","secondary_identifiers":["UniProtKB:Q9USU9"],"synonyms":[{"name":"Spom972h-GTF2A1","type":"exact"},{"name":"TFIIA large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USU9"}


id: MONDO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ARC syndrome (obsolete MONDO:0000444)","synonyms":[{"name":"pericyte cell syndromic disease","type":"exact"}],"termid":"MONDO:0000444","xrefs":{"Monarch":{"xref_id":"0000444"}}}


id: FYPO:0001481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity does not increase as a result of a nutrient stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"},{"relation_name":"is_a","term_name":"abnormal cellular response to nutrient","termid":"FYPO:0001484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001320","FYPO:0001985","FYPO:0000707","FYPO:0000298","FYPO:0000652","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity increase abolished during cellular response to nutrient","synonyms":[{"name":"absent increase in trehalase activity following nutrient stimulus","type":"exact"},{"name":"neutral trehalase activity increase abolished during cellular response to nutrient","type":"exact"},{"name":"trehalase activity increase abolished during cellular response to nutrient","type":"broad"}],"termid":"FYPO:0001481"}


id: PBO:0036379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofusin, mitochondrial dynamin family fusion GTPase protein (predicted)","termid":"PBO:0036379"}


id: FYPO:0004163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability upon glucose starvation","synonyms":[{"name":"increased cell population viability upon glucose starvation","type":"exact"},{"name":"increased viability during glucose starvation","type":"exact"},{"name":"increased viability upon glucose depletion","type":"exact"},{"name":"increased viability upon glucose deprivation","type":"exact"},{"name":"increased viability upon glucose limitation","type":"related"}],"termid":"FYPO:0004163"}


id: GO:0005290
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79473,97713],"is_not":false,"summary":null,"term":"GO:0005290"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-histidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0005290","terms_by_termid":{"GO:0005290":null}}


id: MOD:00308
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an L-glutamine residue to form a carboxyl-terminal L-glutamimide.","definition_xrefs":["Unimod:23#Q","PubMed:12771378","RESID:AA0303","PubMed:14593103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamimide","synonyms":[{"name":"(3S)-3-aminopiperidine-2,6-dione","type":"exact"},{"name":"2-aminopentanimide","type":"exact"},{"name":"3-amino-2,6-piperidinedione","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"L-glutamimide","type":"exact"},{"name":"alpha-aminoglutarimide","type":"exact"}],"termid":"MOD:00308"}


id: PBO:0064762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like pseudogene","termid":"PBO:0064762"}


id: GO:1900778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A biosynthetic process (obsolete GO:1900778)","synonyms":[{"name":"fumiquinazoline A anabolism","type":"exact"},{"name":"fumiquinazoline A biosynthesis","type":"exact"},{"name":"fumiquinazoline A formation","type":"exact"},{"name":"fumiquinazoline A synthesis","type":"exact"}],"termid":"GO:1900778"}


id: MONDO:0006312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, localized, nodular and well-circumscribed neoplasm usually seen as a congenital neoplasm or in the first year of life. It is characterized by a biphasic growth pattern and is composed of small, undifferentiated mesenchymal cells associated with branching thin-walled vessels and more mature neoplastic spindle cells with abundant eosinophilic cytoplasm in a collagenous stroma.","definition_xrefs":["NCIT:C7052"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"excluded_subClassOf","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign perivascular tumor","termid":"MONDO:0003342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibroma","secondary_identifiers":["ICDO:8824/0","MEDGEN:220420","ONCOTREE:MF","UMLS:C1266121","MESH:D047708","DOID:4386","EFO:1000389"],"synonyms":[{"name":"infantile hemangiopericytoma","type":"related"},{"name":"lipoleiomyoma","type":"exact"},{"name":"myofibroma","type":"exact"},{"name":"myofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006312","xrefs":{"Monarch":{"xref_id":"0006312"}}}


id: MONDO:1011489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 3 deficiency that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 3 deficiency, non-human animal","termid":"MONDO:1011421"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 3 deficiency, rabbit","secondary_identifiers":["OMIA:000155-9986"],"synonyms":[{"name":"C3 deficiency, rabbit","type":"exact"}],"termid":"MONDO:1011489","xrefs":{"Monarch":{"xref_id":"1011489"}}}


id: PBO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 1","termid":"PBO:0044079"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: GO:0031383
data:
  {"annotated_genes":["SJAG_03453","SJAG_01794","SJAG_02379","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93839,111753,91205,90225,88244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mating projection biogenesis","type":"related"}],"termid":"GO:0031383","terms_by_termid":{"GO:1902917":null}}


id: GO:0014825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the fundus of stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fundus is the portion of the stomach that lies above the cardiac notch.","definition_xrefs":["MA:0001612","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal stomach smooth muscle contraction","termid":"GO:0014847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}


id: MONDO:0017332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma gangrenosum-acne-suppurative hidradenitis syndrome","secondary_identifiers":["GARD:21139","MEDGEN:1681766","Orphanet:289478","UMLS:C5191642"],"synonyms":[{"name":"pash syndrome","type":"exact"}],"termid":"MONDO:0017332","xrefs":{"Monarch":{"xref_id":"0017332"}}}


id: PBO:0076279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 2 like","termid":"PBO:0076279"}


id: GO:0140105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-10 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11244051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-10-mediated signaling pathway","synonyms":[{"name":"IL-10-mediated signaling pathway","type":"exact"},{"name":"interleukin-10-mediated signalling pathway","type":"exact"}],"termid":"GO:0140105"}


id: MONDO:0020324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intravascular large B-cell lymphoma (IVLBCL) is a very rare form of diffuse large B-cell lymphoma characterized by the selective growth of lymphoma cells within the lumina of small blood vessels (especially the capillaries) that most often presents with a wide range of clinical manifestations (as potentially any tissue can be involved), with patients from Western countries more frequently manifesting with neurological and cutaneous symptoms while patients from Asian countries more frequently displaying hepatosplenomegaly and thrombocytopenia. IVLBCL is characterized by an absence of lymphadenopathy, an aggressive clinical course and a poor prognosis.","definition_xrefs":["Orphanet:98839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"intravascular large B-cell lymphoma","secondary_identifiers":["MedDRA:10069643","ONCOTREE:IVBCL","icd11.foundation:952730197","SCTID:255102004","NCIT:C4342","UMLS:C0334660","ICD9:202.80","MEDGEN:90821","DOID:0081311","GARD:19590","ICDO:9712/3"],"synonyms":[{"name":"IVBCL","type":"related"},{"name":"Tappeiner-Pfleger disease","type":"exact"},{"name":"angioendotheliomatosis proliferans systemisata","type":"exact"},{"name":"angiotropic large cell lymphoma","type":"exact"},{"name":"angiotropic lymphoma","type":"exact"},{"name":"intravascular B-cell lymphoma","type":"exact"},{"name":"intravascular large B-cell lymphoma","type":"exact"},{"name":"intravascular lymphomatosis","type":"exact"},{"name":"malignant angioendotheliomatosis","type":"exact"}],"termid":"MONDO:0020324","xrefs":{"Monarch":{"xref_id":"0020324"}}}


id: GO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oleic acid, the 18-carbon monounsaturated fatty acid (9Z)-octadec-9-enoic acid.","definition_xrefs":["GOC:lp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"oleic acid binding","termid":"GO:0070538"}


id: MONDO:0002653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A premalignant condition morphologically characterized by the presence of the characteristic Paget cells in the intraepithelial tissue of the penis. It presents as a smooth raised reddish area that may or may not be painful. -- 2003","definition_xrefs":["NCIT:C27817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile carcinoma","termid":"MONDO:0006360"},{"relation_name":"is_a","term_name":"extramammary Paget disease","termid":"MONDO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Paget disease of the penis","secondary_identifiers":["UMLS:C0221286","MEDGEN:66374","Orphanet:398053","DOID:3448","GARD:21638","SCTID:398768004"],"synonyms":[{"name":"Paget disease of the penis","type":"exact"},{"name":"Paget's disease of penis","type":"exact"},{"name":"Paget's disease of the penis","type":"exact"},{"name":"adenocarcinoma of penis","type":"exact"},{"name":"adenocarcinoma of the penis","type":"related"},{"name":"penile adenocarcinoma","type":"exact"},{"name":"penis Paget disease","type":"exact"},{"name":"penis Paget's disease","type":"related"},{"name":"penis adenocarcinoma","type":"exact"},{"name":"penis mammary Paget's disease","type":"exact"}],"termid":"MONDO:0002653","xrefs":{"Monarch":{"xref_id":"0002653"}}}


id: MONDO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifactorial disease of cattle resulting from complex interactions between environmental factors, host factors, and pathogens. The environmental factors act as stressors adversely affecting the immune system and other host defenses and enhancing transmission of infecting agents.","definition_xrefs":["MESH:D048090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine respiratory disease complex","secondary_identifiers":["EFO:0007180"],"termid":"MONDO:0005678","xrefs":{"Monarch":{"xref_id":"0005678"}}}


id: MONDO:1011130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis, non-human animal","termid":"MONDO:1010284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allergic rhinitis, cattle","secondary_identifiers":["OMIA:000027-9913"],"termid":"MONDO:1011130","xrefs":{"Monarch":{"xref_id":"1011130"}}}


id: PBO:0057020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 107","termid":"PBO:0057020"}


id: GO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoxetine stimulus. Fluoxetine increases the extracellular level of the neurotransmitter serotonin by inhibiting its reuptake into the presynaptic cell, increasing the level of serotonin available to bind to the postsynaptic receptor.","definition_xrefs":["GOC:ef","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antidepressant","termid":"GO:0036276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluoxetine","synonyms":[{"name":"response to SSRI","type":"related"},{"name":"response to selective serotonin reuptake inhibitor","type":"related"}],"termid":"GO:0014076"}


id: PBO:0070581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 47","termid":"PBO:0070581"}


id: MONDO:0011009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, congenital, with severe central nervous system atrophy and absence of large myelinated fibers","secondary_identifiers":["MESH:C563378","MEDGEN:331338","UMLS:C1832665","OMIM:601170"],"synonyms":[{"name":"muscular dystrophy, congenital, with severe central nervous system atrophy and absence of large myelinated fibers","type":"exact"}],"termid":"MONDO:0011009","xrefs":{"Monarch":{"xref_id":"0011009"}}}


id: MOD:01976
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(poly-3-hydroxybutyrate)-L-serine.","definition_xrefs":["RESID:AA0618","PubMed:17659252","PubMed:20004640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O3-(poly-3-hydroxybutyrate)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[([(3R)-3-hydroxybutanoyl]oxy)-poly([(3R)-3-methyl-1-oxopropane-1,3-diyl]oxy)]propanoic acid","type":"exact"},{"name":"MOD_RES O3-poly(beta-hydroxybutyryl)lysine","type":"exact"},{"name":"O3-(poly-3-hydroxybutyrate)-L-serine","type":"exact"},{"name":"O3-poly(3-hydroxybutanoate)serine","type":"exact"},{"name":"O3-poly(3-hydroxybutanoic acid)serine","type":"exact"},{"name":"O3-poly(3-hydroxybutyrate)serine","type":"exact"},{"name":"O3-poly(3-hydroxybutyric acid)serine","type":"exact"},{"name":"O3-poly(beta-hydroxybutyrate)serine","type":"exact"},{"name":"O3-poly[(R)-3-hydroxybutyrate]serine","type":"exact"}],"termid":"MOD:01976"}


id: PBO:0059317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57","termid":"PBO:0059317"}


id: MONDO:0018918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma of the gallbladder (GBC) is the most common and aggressive form of biliary tract cancer (BTC) usually arising in the fundus of the gallbladder, rapidly metastasizing to lymph nodes and distant sites.","definition_xrefs":["Orphanet:56044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct neoplasm","termid":"MONDO:0021385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"carcinoma of gallbladder and extrahepatic biliary tract","secondary_identifiers":["UMLS:C5566557","MedDRA:10007426","GARD:18850","MEDGEN:1797980"],"synonyms":[{"name":"carcinoma of gallbladder and EBT","type":"exact"}],"termid":"MONDO:0018918","xrefs":{"Monarch":{"xref_id":"0018918"}}}


id: GO:0019331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of ammonium (NH4) to nitrogen (N2) in the absence of oxygen, using nitrite (NO2) as the electron acceptor. It is suggested that hydroxylamine and ammonium are combined to yield hydrazine, which is subsequently oxidized to N2.","definition_xrefs":["MetaCyc:P303-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"anaerobic respiration, using ammonium as electron donor","secondary_identifiers":["Wikipedia:Anammox"],"synonyms":[{"name":"anaerobic ammonium oxidation","type":"broad"},{"name":"anammox","type":"exact"}],"termid":"GO:0019331"}


id: MOD:01161
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes oxygen atoms from a residue without the removal of hydrogen atoms.","definition_xrefs":["PubMed:14235557","Unimod:447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reduced residue","termid":"MOD:01472"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxygenated residue","synonyms":[{"name":"Deoxy","type":"related"},{"name":"dOxyRes","type":"exact"},{"name":"reduction","type":"related"}],"termid":"MOD:01161"}


id: PBO:0028388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_glyoxal","termid":"PBO:0028388"}


id: MONDO:0040753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycobacterium tuberculosis infection that does not induce infectious expression of the disease in the affected person, although it can cause continuous immune response generated towards TB antigens; person having LTBI are asymptomatic and acting as a reservoir of active tuberculosis tuberculosis cases and Mycobacterium tuberculosis and run a 5-10% risk of reactivating tuberculosis throughout their lives.","definition_xrefs":["PMID:32553039","PMID:29770066","PMID:33847703","PMID:33564476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent tuberculosis infection","secondary_identifiers":["MESH:D055985","UMLS:C1609538","SCTID:11999007","MEDGEN:294255"],"synonyms":[{"name":"LTBI","type":"exact"},{"name":"inactive TB","type":"exact"},{"name":"inactive tuberculosis","type":"exact"},{"name":"tuberculosis infection latent","type":"exact"}],"termid":"MONDO:0040753","xrefs":{"Monarch":{"xref_id":"0040753"}}}


id: PBO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (predicted)","termid":"PBO:0002248"}


id: MONDO:0013426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Loeys-Dietz syndrome","termid":"MONDO:0018954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"aneurysm-osteoarthritis syndrome","secondary_identifiers":["MEDGEN:462437","UMLS:C3151087","OMIM:613795","GARD:10997","DOID:0070237","Orphanet:284984"],"synonyms":[{"name":"LDS3","type":"related"},{"name":"Loeys-Dietz syndrome 3","type":"related"},{"name":"Loeys-Dietz syndrome type 3","type":"exact"},{"name":"Loeys-Dietz syndrome with osteoarthritis","type":"related"},{"name":"Loeys-Dietz syndrome, type 1C","type":"related"},{"name":"Loeys-Dietz syndrome, type 1C (formerly)","type":"related"},{"name":"Loeys-Dietz syndrome, type 1C, formerly","type":"related"},{"name":"Loeys-Dietz syndrome, type 3","type":"related"},{"name":"aneurysm - osteoarthritis syndrome","type":"related"},{"name":"aneurysm-osteoarthritis syndrome","type":"exact"},{"name":"aneurysms-osteoarthritis syndrome","type":"related"}],"termid":"MONDO:0013426","xrefs":{"Monarch":{"xref_id":"0013426"}}}


id: SO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is not in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct","termid":"SO:0001514"}


id: PBO:0047817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N3 pseudogene 1","termid":"PBO:0047817"}


id: MONDO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disorder that involves plasma protein metabolism malfunction.","definition_xrefs":["DOID:2345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"plasma protein metabolism disease","secondary_identifiers":["ICD9:273.8","MEDGEN:840208","UMLS:C3875058"],"termid":"MONDO:0002273","xrefs":{"Monarch":{"xref_id":"0002273"}}}


id: GO:0000052
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"citrulline metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"citrulline metabolism","type":"exact"}],"termid":"GO:0000052","terms_by_termid":{"GO:0019240":null}}


id: GO:0006459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete binding unfolded ER proteins (obsolete GO:0006459)","synonyms":[{"name":"binding unfolded ER proteins","type":"exact"}],"termid":"GO:0006459"}


id: PBO:0090932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi 4,6-pyruvylated galactose (PvGal) residue biosynthesis protein Pvg2","termid":"PBO:0090932"}


id: PBO:0076805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 2","termid":"PBO:0076805"}


id: GO:1903111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:24339919","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"},{"relation_name":"is_a","term_name":"negative regulation of single strand break repair","termid":"GO:1903517"},{"relation_name":"negatively_regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-strand break repair via homologous recombination","synonyms":[{"name":"down regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"down-regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"downregulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"inhibition of single-strand break repair via homologous recombination","type":"narrow"}],"termid":"GO:1903111"}


id: MONDO:0008755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian disease characterized by congenital alopecia, early-onset epilepsy, intellectual disability and speech delay. Large stature, delayed bone development and abnormal electroencephalogram have also been associated.","definition_xrefs":["Orphanet:2574"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moynahan syndrome","secondary_identifiers":["MEDGEN:120535","MESH:C537052","OMIM:203600","UMLS:C0265328","GARD:606"],"synonyms":[{"name":"Moynahan alopecia syndrome","type":"related"},{"name":"alopecia epilepsy oligophrenia syndrome of Moynahan","type":"related"},{"name":"alopecia-epilepsy-intellectual disability syndrome, Moynahan type","type":"exact"},{"name":"alopecia-epilepsy-oligophrenia syndrome of Moynahan","type":"related"}],"termid":"MONDO:0008755","xrefs":{"Monarch":{"xref_id":"0008755"}}}


id: MONDO:0042458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Trichinella spiralis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichinellosis","termid":"MONDO:0019444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Trichinella spiralis infectious disease","secondary_identifiers":["UMLS:C3887668","SCTID:88264003","MEDGEN:854509"],"synonyms":[{"name":"Trichinella spiralis caused disease or disorder","type":"exact"},{"name":"Trichinella spiralis disease or disorder","type":"exact"},{"name":"infection by larvae of Trichinella spiralis","type":"exact"},{"name":"infection caused by larvae of Trichinella spiralis","type":"related"},{"name":"trichinelliasis caused by Trichinella spiralis","type":"related"},{"name":"trichinellosis caused by Trichinella spiralis","type":"related"},{"name":"trichiniasis caused by Trichinella spiralis","type":"related"},{"name":"trichinosis caused by Trichinella spiralis","type":"related"}],"termid":"MONDO:0042458","xrefs":{"Monarch":{"xref_id":"0042458"}}}


id: MONDO:0859305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with eye movement abnormalities and ataxia","secondary_identifiers":["OMIM:620094","UMLS:C5774241","DOID:0081275","MEDGEN:1824014"],"termid":"MONDO:0859305","xrefs":{"Monarch":{"xref_id":"0859305"}}}


id: PBO:0015254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 ubiquitin-like conjugating enzyme Atg7","termid":"PBO:0015254"}


id: MONDO:0015294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrogenic systemic fibrosis (NSF) is a rare systemic fibrosing condition observed in renally impaired patients and characterized by a hardening and thickening of the skin with fibrotic plaques or papules, pruritus, joint pain and stiffness, muscle weakness, limitation of range of motion, and yellowed eyes. It is generally associated with administration of gadolinium-based magnetic resonance imaging contrast agents (GBCA) in patients with kidney disease.","definition_xrefs":["Orphanet:137617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nephrogenic systemic fibrosis","secondary_identifiers":["UMLS:C3888044","MedDRA:10067467","MESH:D054989","NORD:1498","SCTID:424114000","MEDGEN:854737","NCIT:C84920","ICD9:588.89","icd11.foundation:1537082562","GARD:9725"],"synonyms":[{"name":"NFD","type":"related"},{"name":"NSF","type":"related"},{"name":"nephrogenic fibrosing dermopathy","type":"exact"}],"termid":"MONDO:0015294","xrefs":{"Monarch":{"xref_id":"0015294"}}}


id: PBO:0077757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 20 like","termid":"PBO:0077757"}


id: PBO:0081635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 563","termid":"PBO:0081635"}


id: PBO:0058073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4291","termid":"PBO:0058073"}


id: PBO:0030149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-glutamyltransferase_activity","termid":"PBO:0030149"}


id: PR:G2TRQ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam9 gene.","definition_xrefs":["UniProtKB:G2TRQ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L36, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.18","synonyms":[{"name":"Spom972h-tam9","type":"exact"},{"name":"transcripts altered in meiosis protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ8"}


id: PBO:0056970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26a-1","termid":"PBO:0056970"}


id: GO:2000503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of natural killer cell chemotaxis","termid":"GO:2000501"},{"relation_name":"positively_regulates","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell chemotaxis","termid":"GO:2000503"}


id: PBO:0086877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcriptional activator; interacts with G1-specific transcription factor MBF and G1-specific promoters; MSA2 has a paralog, MSA1, that arose from the whole genome duplication","termid":"PBO:0086877"}


id: PBO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Lsk1","termid":"PBO:0002304"}


id: MONDO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of liver and intrahepatic biliary tract (obsolete MONDO:0018530)","secondary_identifiers":["Orphanet:424933"],"synonyms":[{"name":"rare epithelial tumor of liver and IBT","type":"exact"}],"termid":"MONDO:0018530","xrefs":{"Monarch":{"xref_id":"0018530"}}}


id: GO:0044360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated potassium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of voltage-gated potassium channel activity in another organism (obsolete GO:0044360)","synonyms":[{"name":"modulation of voltage-gated potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044360"}


id: GO:0090156
data:
  {"annotated_genes":["SJAG_04550"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73407],"is_not":false,"summary":null,"term":"GO:0090156"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sphingolipids within a cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular sphingolipid homeostasis","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cellular sphingolipid homeostasis","type":"exact"}],"termid":"GO:0090156","terms_by_termid":{"GO:0090156":null}}


id: PR:O59715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsd1 gene.","definition_xrefs":["UniProtKB:O59715","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid delta(4)-desaturase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.07c","synonyms":[{"name":"Spom972h-dsd1","type":"exact"},{"name":"delta 4-(E)-sphingolipid desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dihydroceramide desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59715"}


id: GO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + FMNH(2) + O2 = acetaldehyde + FMN + H2O + H+ + nitrite.","definition_xrefs":["RHEA:26458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitronate monooxygenase (FMN-linked) activity","secondary_identifiers":["KEGG_REACTION:R00025"],"termid":"GO:0036434"}


id: MONDO:0008936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia and neurosensory deafness","secondary_identifiers":["UMLS:C1859304","OMIM:212850","MEDGEN:395224","MESH:C565869"],"synonyms":[{"name":"cerebellar ataxia and neurosensory deafness","type":"exact"}],"termid":"MONDO:0008936","xrefs":{"Monarch":{"xref_id":"0008936"}}}


id: PBO:0026918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rRNA_modification","termid":"PBO:0026918"}


id: GO:0071267
data:
  {"annotated_genes":["SJAG_02689","SJAG_04425","SJAG_03881","SJAG_03614","SJAG_00309","SJAG_02293","SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58783,77278,78230,78680,79590,80470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[98881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"Any process that generates L-methionine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid salvage","termid":"GO:0043102"},{"relation_name":"is_a","term_name":"L-methionine biosynthetic process","termid":"GO:0071265"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null,"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-methionine salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0071267","terms_by_termid":{"GO:0019284":null,"GO:0019509":null}}


id: PBO:0109627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 2 (pseudogene)","termid":"PBO:0109627"}


id: PBO:0045424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 4","termid":"PBO:0045424"}


id: PBO:0085529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S28, no bacterial homolog; has an extraribosomal function in autoregulation, in which Rps28Bp binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; RPS28B has a paralog, RPS28A, that arose from the whole genome duplication","termid":"PBO:0085529"}


id: GO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0000430"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"positive regulation of transcription by glucose","termid":"GO:0046016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"}],"termid":"GO:0000432"}


id: RO:0008507
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_on","termid":"RO:0008507"}


id: GO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Binding of a diffusible ligand to a T cell receptor as part of a signaling process.","definition_xrefs":["GOC:jid","GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand binding to T cell receptor (obsolete GO:0023007)","synonyms":[{"name":"ligand binding to T cell receptor","type":"exact"}],"termid":"GO:0023007"}


id: PBO:0057588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892a","termid":"PBO:0057588"}


id: RO:0002596
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_regulating","termid":"RO:0002596"}


id: MOD:01319
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:12422359","PubMed:11510821","Unimod:176#H","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to histidine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01319"}


id: GO:0052759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trinitrophenol hydride Meisenheimer complex + H- = trinitrophenol dihydride Meisenheimer complex (aci form). Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["UM-BBD_reactionID:r1066","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme F420-dependent 2,4,6-trinitrophenol hydride reductase activity (obsolete GO:0052759)","synonyms":[{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol-hydride-Meisenheimer-complex hydride transferase activity","type":"exact"}],"termid":"GO:0052759"}


id: GO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of the floral organs with reference to the central axis of the flower.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"establishment of plant organ orientation","termid":"GO:0090707"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of floral organ orientation","termid":"GO:0048559"}


id: GO:0090275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatostatin secretion","termid":"GO:0090273"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"somatostatin secretion","termid":"GO:0070253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of somatostatin secretion","termid":"GO:0090275"}


id: RO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_across","termid":"RO:0002021"}


id: MONDO:0011652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic neurodevelopmental disorder characterized by neonatal hypotonia, global developmental delay, normal to accelerated growth, absent to severely delayed speech, and minor dysmorphic features. Phelan-McDermid syndrome can be caused by a deletion at chromosome 22q13 or by mutation in the SHANK3 gene.","definition_xrefs":["Orphanet:48652","OMIM:606232"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chromosome 22q deletion","termid":"MONDO:0022760"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phelan-McDermid syndrome","secondary_identifiers":["UMLS:C1853490","NORD:1573","DECIPHER:20","ICD9:758.39","GARD:10130","NCIT:C157124","MEDGEN:339994","MESH:C536801","SCTID:699310000","DOID:0080354"],"synonyms":[{"name":"22q13 deletion","type":"narrow"},{"name":"22q13.3 deletion syndrome","type":"related"},{"name":"PHMDS","type":"exact"},{"name":"Phelan McDermid syndrome","type":"exact"},{"name":"Phelan-McDermid syndrome","type":"exact"},{"name":"chromosome 22Q13.3 deletion syndrome","type":"related"},{"name":"deletion 22q13.3 syndrome","type":"related"},{"name":"monosomy 22q13","type":"narrow"},{"name":"monosomy type 22q13","type":"narrow"},{"name":"telomeric 22Q13 monosomy syndrome","type":"related"}],"termid":"MONDO:0011652","xrefs":{"Monarch":{"xref_id":"0011652"}}}


id: GO:0019901
data:
  {"annotated_genes":["SJAG_06592","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[71371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase binding","termid":"GO:0019900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein kinase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019901","terms_by_termid":{"GO:0034236":null,"GO:0043424":null}}


id: PBO:0038456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis antagonizing transcription factor","termid":"PBO:0038456"}


id: PBO:0053502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 485","termid":"PBO:0053502"}


id: PBO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase Gln1","termid":"PBO:0001060"}


id: GO:0005954
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins.","definition_xrefs":["PMID:20668654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calcium- and calmodulin-dependent protein kinase complex","synonyms":[{"name":"CAMK2","type":"exact"},{"name":"CaMKII","type":"related"},{"name":"calcium/calmodulin-dependent protein kinase complex","type":"exact"}],"termid":"GO:0005954"}


id: GO:0102784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: lutein + 2 O2 = 3-hydroxy-beta-ionone + 3-hydroxy-alpha-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lutein oxygenase activity (obsolete GO:0102784)","termid":"GO:0102784"}


id: PBO:0008159
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the phenotypes attributed to imp1 in PMID:18692466 have since been attributed to a truncated allele of SPAC11E3.05","termid":"PBO:0008159"}


id: GO:0044416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host defense response (obsolete GO:0044416)","synonyms":[{"name":"activation by symbiont of host defense response","type":"exact"},{"name":"activation of host defense response","type":"exact"},{"name":"induction by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host defense response","type":"related"},{"name":"stimulation by symbiont of host defense response","type":"related"},{"name":"up regulation by symbiont of host defense response","type":"related"},{"name":"up-regulation by symbiont of host defense response","type":"related"},{"name":"upregulation by symbiont of host defense response","type":"related"}],"termid":"GO:0044416"}


id: GO:0036031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the guanylyltransferase enzyme responsible for adding a 7-methylguanosine cap on pre-mRNA becomes associated with the RNA polymerase II holoenzyme complex and the 5' end of a transcript.","definition_xrefs":["GOC:bf","GOC:rb","PMID:10594013"],"gene_count":0,"genotype_count":0,"name":"obsolete recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:0036031)","synonyms":[{"name":"capping enzyme targeting to RNA polymerase II","type":"exact"},{"name":"recruitment of guanylyltransferase to RNA polymerase II holoenzyme complex","type":"exact"}],"termid":"GO:0036031"}


id: PBO:0084180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; involved in regulation of chromatin structure in both transcribed and silenced chromosomal regions; affects transcriptional elongation; has a role in regulation of Ty1 transposition; interacts physically and functionally with Chromatin Assembly Factor-1 (CAF-1)","termid":"PBO:0084180"}


id: PATO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is less than 180 degrees to another entity.","definition_xrefs":["maths.org:maths.org"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex angle to","termid":"PATO:0001053"}


id: GO:0140133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which a symbiont inhibits or disrupts cytokine production in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23083102"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host cytokine production (obsolete GO:0140133)","synonyms":[{"name":"negative regulation by symbiont of host cytokine production","type":"exact"},{"name":"suppression by symbiont of host cytokine production","type":"exact"},{"name":"suppression by symbiont of host cytokine secretion","type":"related"}],"termid":"GO:0140133"}


id: PBO:0092033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine (uga), mitochondrial","termid":"PBO:0092033"}


id: GO:1904895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ESCRT complex.","definition_xrefs":["GOC:pad","PMID:21118109","GO_REF:0000079","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ESCRT complex assembly","synonyms":[{"name":"ESCRT complex formation","type":"exact"},{"name":"endosomal sorting complex required for transport assembly","type":"exact"},{"name":"endosomal sorting complex required for transport formation","type":"exact"}],"termid":"GO:1904895"}


id: PBO:0065683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTTG1 regulator of sister chromatid separation, securin","termid":"PBO:0065683"}


id: PBO:0089475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, unknown specificity, implicated in sulfur compound metabolism","termid":"PBO:0089475"}


id: MONDO:0040502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial glucocorticoid deficiency","termid":"MONDO:0008733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid deficiency 5","secondary_identifiers":["MEDGEN:1614419","OMIM:617825","UMLS:C4540522","GARD:16257"],"synonyms":[{"name":"GCCD5","type":"related"},{"name":"glucocorticoid deficiency 5","type":"exact"}],"termid":"MONDO:0040502","xrefs":{"Monarch":{"xref_id":"0040502"}}}


id: PBO:0072191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 8","termid":"PBO:0072191"}


id: GO:0047251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylthioacetohydroximate + UDP-D-glucose = desulfoglucotropeolin + UDP.","definition_xrefs":["EC:2.4.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"thiohydroximate beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.195-RXN","RHEA:13757"],"synonyms":[{"name":"N-hydroxythioamide S-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-hydroxy-2-phenylethanethioamide S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:thiohydroximate S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:thiohydroximate glucosyltransferase activity","type":"related"},{"name":"desulfoglucosinolate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"thiohydroximate S-glucosyltransferase activity","type":"related"},{"name":"thiohydroximate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-thiohydroximate glucosyltransferase activity","type":"related"}],"termid":"GO:0047251"}


id: PBO:0081088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 18","termid":"PBO:0081088"}


id: FYPO:0008081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the growth of a population of cells is decreased relative to normal in the vegetative growth phase of the life cycle when the population is co-cultured with wild-type cells. Decreased growth may reflect a reduced growth rate (i.e. slower growth), growth that occurs to a lesser extent than normal, or both.","definition_xrefs":["PMID:36302945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0000139","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"decreased vegetative cell population growth when co-cultured with wild-type cells","synonyms":[{"name":"adaptive growth","type":"related"}],"termid":"FYPO:0008081"}


id: PBO:0071713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 11","termid":"PBO:0071713"}


id: PBO:0090582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 3, Pup3","termid":"PBO:0090582"}


id: PBO:0085636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in homologous recombination; attenuates resection of DNA double-strand break ends and stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis and UV induced sister chromatid recombination; phosphorylation by Cdc28p in G2/M phase promotes Rad52p ring interaction that leads to superstructure formation","termid":"PBO:0085636"}


id: GO:0038185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a bile acid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10334992","PMID:36409000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nuclear receptor-mediated bile acid signaling pathway","synonyms":[{"name":"BAR signaling pathway","type":"related"},{"name":"FXR signaling pathway","type":"exact"},{"name":"farnesoid X receptor signaling pathway","type":"exact"},{"name":"intracellular bile acid receptor signaling pathway","type":"exact"},{"name":"nuclear bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038185"}


id: PBO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 115","termid":"PBO:0044828"}


id: GO:0102211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-O-(4-deoxy-beta-L-threo-hex-4-enopyranuronosyl)-alpha-L-rhamnopyranose(1-) + H2O = (4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate + alpha-L-rhamnopyranose.","definition_xrefs":["EC:3.2.1.172","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"unsaturated rhamnogalacturonyl hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12174","RHEA:30927"],"termid":"GO:0102211"}


id: FYPO:0000086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus. Cells stop growing (and may die) at a concentration of tacrolimus that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tacrolimus","synonyms":[{"name":"hypersensitive to tacrolimus","type":"exact"},{"name":"sensitive to FK506","type":"exact"},{"name":"sensitive to tacrolimus during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during vegetative growth","type":"exact"}],"termid":"FYPO:0000086"}


id: MONDO:0100470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coughing, wheezing, or shortness of breath that is triggered by allergens, infection, or other irritants.","definition_xrefs":["NCIT:C113673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive airway disease","secondary_identifiers":["SCTID:991000119106","MEDGEN:811342","UMLS:C3714497"],"synonyms":[{"name":"hyperactive airway disease","type":"exact"},{"name":"reactive airway disease (AQ)","type":"exact"}],"termid":"MONDO:0100470","xrefs":{"Monarch":{"xref_id":"0100470"}}}


id: PBO:0077754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 6","termid":"PBO:0077754"}


id: MONDO:0700066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the FKRP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"disorder of protein O-glycosylation","termid":"MONDO:0017741"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"myopathy caused by variation in FKRP","synonyms":[{"name":"FKRP myopathy","type":"exact"},{"name":"FKRP-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in FKRP","type":"exact"}],"termid":"MONDO:0700066","xrefs":{"Monarch":{"xref_id":"0700066"}}}


id: PBO:0004659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein, histone chaperone Hip1","termid":"PBO:0004659"}


id: PR:O42658
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pterin-4-alpha-carbinolamine dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01871","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin-4-alpha-carbinolamine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.04","secondary_identifiers":["UniProtKB:O42658"],"synonyms":[{"name":"4-alpha-hydroxy-tetrahydropterin dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PCD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PHS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCBD1","type":"exact"},{"name":"overlapping meiotic transcript 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pterin carbinolamine dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42658"}


id: PBO:0071379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 2","termid":"PBO:0071379"}


id: PBO:0079830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream master lncRNA of the inflammatory chemokine locus","termid":"PBO:0079830"}


id: MONDO:0008700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acheiropodia is an extremely rare developmental disorder characterized by bilateral, congenital and complete amputation of the distal extremities (amputation of distal epiphysis of the humerus, distal portion of the tibial diaphysis, aplasia of the radius, ulna, fibula) and aplasia of hands and feet (aplasia of carpal, metacarpal, tarsal, metatarsal and phalangeal bones). Rarely, an ectopic bone can be found at the distal end of the humerus. No other systemic manifestations have been reported and the disorder follows an autosomal recessive pattern of inheritance.","definition_xrefs":["Orphanet:931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiropody","secondary_identifiers":["MEDGEN:120547","UMLS:C0265559","MESH:C536014","DOID:0050603","GARD:376","OMIM:200500","SCTID:177504007"],"synonyms":[{"name":"ACHP","type":"related"},{"name":"acheiropodia","type":"exact"},{"name":"acheiropody","type":"exact"},{"name":"acheiropody, Brazilian type","type":"related"},{"name":"horn-Kolb syndrome","type":"exact"}],"termid":"MONDO:0008700","xrefs":{"Monarch":{"xref_id":"0008700"}}}


id: MONDO:0013904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy-dystroglycanopathy, type A in which the cause of the disease is a mutation in the POMGNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy caused by variation in POMGNT2","termid":"MONDO:0700075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 8","secondary_identifiers":["MEDGEN:766727","UMLS:C3553813","DOID:0111231","OMIM:614830","GARD:15846"],"synonyms":[{"name":"MDDGA8","type":"related"},{"name":"POMGNT2 muscular dystrophy-dystroglycanopathy, type A","type":"exact"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, Gtdc2-related","type":"related"},{"name":"muscle-eye-brain-POMGNT2 related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 8","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 8","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies, type A, 8","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, type A caused by mutation in POMGNT2","type":"exact"}],"termid":"MONDO:0013904","xrefs":{"Monarch":{"xref_id":"0013904"}}}


id: PBO:0065533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre T cell antigen receptor alpha","termid":"PBO:0065533"}


id: SO:1000042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant where a monocentric element is caused by the fusion of two chromosome arms.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compound_chromosome","synonyms":[{"name":"compound chromosome","type":"exact"}],"termid":"SO:1000042"}


id: PBO:0056359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 1 interacting protein 1 like","termid":"PBO:0056359"}


id: PBO:0077850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 1","termid":"PBO:0077850"}


id: PBO:0078325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRDN antisense RNA 1","termid":"PBO:0078325"}


id: GO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannan, a group of polysaccharides containing a backbone composed of a polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"mannan metabolic process","synonyms":[{"name":"mannan metabolism","type":"exact"}],"termid":"GO:0010412"}


id: PBO:0068045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 350","termid":"PBO:0068045"}


id: MONDO:0019398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rigid spine muscular dystrophy 1","termid":"MONDO:0011271"},{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"desmin-related myopathy with Mallory body-like inclusions","secondary_identifiers":["MEDGEN:898925","Orphanet:84132","GARD:16732","icd11.foundation:998522839","UMLS:C4275073"],"synonyms":[{"name":"early-onset desmin-related myopathy","type":"exact"}],"termid":"MONDO:0019398","xrefs":{"Monarch":{"xref_id":"0019398"}}}


id: MONDO:0009727
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87100,87101],"is_not":false,"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","definition":"A lethal perinatal bone dysplasia characterized by limb shortening, normal sized skull with cleft palate, hitchhiker thumbs, distinctive facial dysmorphism and radiographic skeletal features, caused by mutations in the diastrophic dysplasia sulfate transporter gene.","definition_xrefs":["Orphanet:56304"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"SLC26A2-related skeletal dysplasia","termid":"MONDO:0100592"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"atelosteogenesis type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:338072","ICD10CM:Q77.5","SCTID:254055004","ICD9:756.9","OMIM:256050","MESH:C535395","GARD:8329","UMLS:C1850554"],"synonyms":[{"name":"AO2","type":"exact"},{"name":"AOII","type":"exact"},{"name":"De 50A Chapelle dysplasia","type":"related"},{"name":"De la Chapelle dysplasia","type":"related"},{"name":"atelosteogenesis II","type":"related"},{"name":"atelosteogenesis type 2","type":"exact"},{"name":"atelosteogenesis type II","type":"exact"},{"name":"atelosteogenesis, type 2","type":"related"},{"name":"atelosteogenesis, type II","type":"related"},{"name":"neonatal osseous dysplasia 1","type":"related"},{"name":"neonatal osseous dysplasia type 1","type":"exact"}],"termid":"MONDO:0009727","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0009727"}}}


id: GO:0016723
data:
  {"annotated_genes":["SJAG_04459","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74917,79405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the metal ion is reduced and NAD+ or NADP+ acts as an electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.16.1.-"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, reducing metal ions, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016723","terms_by_termid":{"GO:0030586":null}}


id: PBO:0087365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific homolog of the CDC3/10/11/12 family of genes; meiotic septin expressed at high levels during meiotic divisions and ascospore formation; the yeast CDC3/10/11/12 family is a family of bud neck microfilament genes","termid":"PBO:0087365"}


id: MONDO:0006732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal movements, including hyperkinesis; hypokinesia; tremor; and dystonia, associated with the use of certain medications or drugs. Muscles of the face, trunk, neck, and extremities are most commonly affected. Tardive dyskinesia refers to abnormal hyperkinetic movements of the muscles of the face, tongue, and neck associated with the use of neuroleptic agents (see antipsychotic agents). (Adams et al., Principles of Neurology, 6th ed, p1199)","definition_xrefs":["MESH:D004409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced dyskinesia","secondary_identifiers":["ICD9:333.99","MEDGEN:3935","SCTID:102448004","EFO:1000904","UMLS:C0013386","MedDRA:10013916"],"termid":"MONDO:0006732","xrefs":{"Monarch":{"xref_id":"0006732"}}}


id: GO:0098899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the spine apparatus membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"spine apparatus lumen","termid":"GO:0098899"}


id: FYPO:0001092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the binding of a gene product to another substance. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"binding phenotype","synonyms":[{"name":"fission yeast binding phenotype","type":"exact"}],"termid":"FYPO:0001092"}


id: PBO:0065526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 1","termid":"PBO:0065526"}


id: PBO:0059287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 2","termid":"PBO:0059287"}


id: GO:1905578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERBB3 signaling pathway.","definition_xrefs":["GOC:als","PMID:27353365","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"regulates","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ERBB3 signaling pathway","synonyms":[{"name":"regulation of ERBB3 signalling pathway","type":"exact"},{"name":"regulation of HER3 signaling pathway","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:1905578"}


id: GO:0046861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a glyoxysome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane","termid":"GO:0005778"},{"relation_name":"part_of","term_name":"glyoxysome","termid":"GO:0009514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glyoxysomal membrane","synonyms":[{"name":"glyoxysome membrane","type":"exact"}],"termid":"GO:0046861"}


id: GO:1901004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["GOC:TermGenie","PMID:1409592","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone-6 metabolic process (obsolete GO:1901004)","synonyms":[{"name":"coenzyme Q6 metabolic process","type":"exact"},{"name":"coenzyme Q6 metabolism","type":"exact"},{"name":"ubiquinone-6 metabolism","type":"exact"}],"termid":"GO:1901004"}


id: GO:0021689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar molecular layer. This process pertains to the physical shaping of a rudimentary structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer structural organization","synonyms":[{"name":"cerebellar molecular layer structural organisation","type":"exact"}],"termid":"GO:0021689"}


id: PBO:0085656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrion organization; functions with Nca2p to regulate mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) of the Fo-F1 ATP synthase; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the vacuole; member of the SUN family; expression induced in cells treated with the mycotoxin patulin; NCA3 has a paralog, UTH1, that arose from the whole genome duplication","termid":"PBO:0085656"}


id: PBO:0059223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 5 (gene/pseudogene)","termid":"PBO:0059223"}


id: GO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"positive regulation of VLDL remodeling","type":"exact"},{"name":"positive regulation of VLDL remodelling","type":"exact"},{"name":"positive regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010902"}


id: FYPO:0005251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tellurite (TeO3(2-)) ions. Cells stop growing (and may die) at a concentration of tellurite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tellurite","synonyms":[{"name":"hypersensitive to tellurite","type":"exact"},{"name":"sensitive to tellurite during mitotic cell cycle","type":"related"},{"name":"sensitive to tellurite during vegetative growth","type":"exact"},{"name":"sensitive to tellurite ions","type":"exact"}],"termid":"FYPO:0005251"}


id: MOD:01346
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-hexosyl-L-asparagine.","definition_xrefs":["PubMed:11112526","Unimod:41#N","PubMed:6540775","PubMed:15279557","PubMed:11567090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-hexosylated asparagine","synonyms":[{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"}],"termid":"MOD:01346"}


id: PBO:0052706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 7","termid":"PBO:0052706"}


id: MONDO:1010191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of uridine monophosphate synthase that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"},{"relation_name":"is_a","term_name":"anemia, non-human animal","termid":"MONDO:1012981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficiency of uridine monophosphate synthase, non-human animal","secondary_identifiers":["OMIA:000262"],"termid":"MONDO:1010191","xrefs":{"Monarch":{"xref_id":"1010191"}}}


id: GO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the epoxidation of double bonds of the arachidonoyl moiety of anandamide.","definition_xrefs":["PMID:21289075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"anandamide epoxidase activity","synonyms":[{"name":"arachidonoylethanolamide epoxidase activity","type":"exact"}],"termid":"GO:0062186"}


id: FYPO:0003949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfite reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal sulfite reductase activity","termid":"FYPO:0003948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased sulfite reductase activity","synonyms":[{"name":"decreased sulphite reductase activity","type":"exact"},{"name":"reduced sulfite reductase activity","type":"exact"}],"termid":"FYPO:0003949"}


id: PATO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000736 dysfunctional value (obsolete PATO:0000736)","termid":"PATO:0000736"}


id: PR:O13857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1A6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.03c","synonyms":[{"name":"Spom972h-SPAC1A6.03c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13857"}


id: GO:0097436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["PO_REF:00009","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into dormancy","synonyms":[{"name":"induction of dormancy","type":"exact"}],"termid":"GO:0097436"}


id: PBO:0046759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 1","termid":"PBO:0046759"}


id: PBO:0084599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL199C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKL198C","termid":"PBO:0084599"}


id: PBO:0034803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy serine/threonine protein kinase Atg1","termid":"PBO:0034803"}


id: SO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A family of RNAs are found as part of the enigmatic vault ribonucleoprotein complex. The complex consists of a major vault protein (MVP), two minor vault proteins (VPARP and TEP1), and several small untranslated RNA molecules. It has been suggested that the vault complex is involved in drug resistance.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Vault_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:vault_RNA","type":"exact"},{"name":"vault RNA","type":"exact"}],"termid":"SO:0000404"}


id: GO:0006352
data:
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Transcription initiation includes abortive initiation events, which occur when the first few nucleotides are repeatedly synthesized and then released, and ends when promoter clearance takes place.","definition_xrefs":["GOC:jid","GOC:txnOH","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":176,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00067":null,"SJAG_00087":null,"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00184":null,"SJAG_00202":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00349":null,"SJAG_00421":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00540":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00634":null,"SJAG_00641":null,"SJAG_00650":null,"SJAG_00692":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00741":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00758":null,"SJAG_00766":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00872":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00901":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00995":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01207":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01523":null,"SJAG_01562":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01710":null,"SJAG_01711":null,"SJAG_01712":null,"SJAG_01713":null,"SJAG_01744":null,"SJAG_01765":null,"SJAG_01771":null,"SJAG_01804":null,"SJAG_01808":null,"SJAG_01827":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02101":null,"SJAG_02170":null,"SJAG_02174":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02600":null,"SJAG_02691":null,"SJAG_02747":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03007":null,"SJAG_03014":null,"SJAG_03033":null,"SJAG_03035":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03120":null,"SJAG_03145":null,"SJAG_03206":null,"SJAG_03211":null,"SJAG_03255":null,"SJAG_03285":null,"SJAG_03289":null,"SJAG_03354":null,"SJAG_03366":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03618":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03900":null,"SJAG_03944":null,"SJAG_03956":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04614":null,"SJAG_04647":null,"SJAG_04654":null,"SJAG_04705":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04766":null,"SJAG_04820":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04977":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05313":null,"SJAG_05331":null,"SJAG_05339":null,"SJAG_05341":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"DNA-templated transcription initiation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001123"],"synonyms":[{"name":"DNA-dependent RNA polymerase complex assembly at promoter","type":"exact"},{"name":"DNA-dependent transcription, initiation","type":"exact"},{"name":"DNA-templated transcription, initiation","type":"exact"},{"name":"initiation of DNA-dependent transcription","type":"exact"},{"name":"initiation of transcription, DNA-dependent","type":"exact"},{"name":"transcription initiation factor activity","type":"related"},{"name":"transcription initiation from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription initiation, DNA-dependent","type":"related"}],"termid":"GO:0006352","terms_by_termid":{"GO:0001174":null,"GO:0001188":null,"GO:0006361":null,"GO:0006367":null,"GO:0006384":null,"GO:0006391":null,"GO:0045815":null,"GO:0045899":null,"GO:0051123":null,"GO:0060261":null,"GO:0070898":null}}


id: PBO:0057330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520e","termid":"PBO:0057330"}


id: PBO:0040854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S6 pseudogene 1","termid":"PBO:0040854"}


id: PBO:0058849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8078","termid":"PBO:0058849"}


id: GO:0043962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0043962)","termid":"GO:0043962"}


id: PBO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ortholog qualifier","termid":"PBO:0006313"}


id: MONDO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eye disorder that results from vitamin A deficiency, with basis in disruption of maintenance of the specialized epithelial surfaces, leading to atrophic changes in the normal mucosal surface, with loss of goblet cells, and replacement of the normal epithelium by an inappropriate keratinized stratified squamous epithelium. In addition, the substantia propria of the cornea breaks down and liquefies, resulting in keratomalacia.","definition_xrefs":["Wikipedia:Keratomalacia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratomalacia","secondary_identifiers":["MESH:C536156","DOID:11267","SCTID:85149007","icd11.foundation:497316188","UMLS:C0152455","ICD9:371.45","MEDGEN:57777"],"termid":"MONDO:0001250","xrefs":{"Monarch":{"xref_id":"0001250"}}}


id: GO:2000149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in ventricular septum morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis (obsolete GO:2000149)","termid":"GO:2000149"}


id: PR:O14351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-xylulose reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C30D10.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.05c","secondary_identifiers":["UniProtKB:O14351"],"synonyms":[{"name":"Spom972h-DCXR","type":"exact"}],"termid":"PR:O14351"}


id: MONDO:1030005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatic mosaic condition caused by a postzygotic mutation (c.1234 C>T p.Leu412Phe) in the SMO gene. Two overlapping clinical syndromes associated with this variant in SMO have been reported; Curry-Jones Syndrome (MIM:601707) and Happle-Tinschert Syndrome. The syndrome is characterized by cutaneous and skeletal manifestations such as linear hypo‐ or hyperpigmented lesions, basaloid follicular hamartomas, palmoplantar pitting, atrophoderma, hypertrichosis, polydactyly or syndactyly, rib anomalies (rudimentary ribs), and limb‐length anomalies. Craniofacial and dental abnormalities such as dysmorphic facies, macrocephaly, craniosynostosis, jaw tumors (ameloblastoma) have also been reported. Additional abnormalities impacting the gastrointestinal, cerebral, ophthalmic, and gonadal organs should also be considered. Some of these features include anal anomaly, colonic adenocarcinoma, severe constipation, myelofibrosis and smooth muscle hamartomas, malrotation, medulloblastoma, cerebral malformations, developmental delay, cataract, microphthalmia, coloboma, glaucoma, and cryptorchidism.","definition_xrefs":["PMID:32413283","PMID:30497210","PMID:31120550","PMID:27236920","PMID:7606318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic SMO syndrome","termid":"MONDO:1030005","xrefs":{"Monarch":{"xref_id":"1030005"}}}


id: PBO:0073398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 1","termid":"PBO:0073398"}


id: GO:0099011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a neuronal dense core vesicle by fusion of the granule with the plasma membrane of a neuron in response to increased cytosolic calcium levels.","definition_xrefs":["PMID:17553987","GOC:kmv","PMID:24653208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neuronal dense core vesicle exocytosis","termid":"GO:0099011"}


id: FYPO:0000690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased oxidoreductase activity","synonyms":[{"name":"reduced oxidoreductase activity","type":"exact"}],"termid":"FYPO:0000690"}


id: GO:0106334
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119334],"is_not":false,"summary":null,"term":"GO:0106334"}]},"cv_name":"molecular_function","definition":"Catalysis of the conversion of a 3'-deoxyribose phosphate in DNA to a 3'-phosphate.","definition_xrefs":["PMID:22375014","PMID:21276450","RHEA:65764","PMID:22084197","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-deoxyribose phosphate lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-dRP lyase","type":"related"},{"name":"3'-dRP lyase activity","type":"related"}],"termid":"GO:0106334","terms_by_termid":{"GO:0106334":null}}


id: MONDO:0975758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvenular haemangioma","secondary_identifiers":["MEDGEN:725856","Orphanet:675369","UMLS:C1304506"],"termid":"MONDO:0975758","xrefs":{"Monarch":{"xref_id":"0975758"}}}


id: FYPO:0005086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at small nucleolar RNA (snoRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at snoRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at snoRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at snoRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at snoRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005086"}


id: PBO:0059727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 1","termid":"PBO:0059727"}


id: GO:1900360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pentasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pentasaccharide transport","termid":"GO:1900360"}


id: MONDO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the supraglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:C3545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"supraglottis neoplasm","termid":"MONDO:0004427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis cancer","secondary_identifiers":["ICD10CM:C32.1","SCTID:187842004","ICD9:161.1","MEDGEN:57561","UMLS:C0153484","DOID:13476"],"synonyms":[{"name":"Ca larynx - supraglottis","type":"exact"},{"name":"cancer of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of extrinsic larynx","type":"exact"},{"name":"malignant neoplasm of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of supraglottis","type":"exact"},{"name":"malignant neoplasm of the supraglottis","type":"exact"},{"name":"malignant supraglottic neoplasm","type":"exact"},{"name":"malignant supraglottic part of larynx neoplasm","type":"exact"},{"name":"malignant supraglottic tumor","type":"exact"},{"name":"malignant supraglottic tumour","type":"exact"},{"name":"malignant supraglottis neoplasm","type":"exact"},{"name":"malignant supraglottis tumor","type":"exact"},{"name":"malignant supraglottis tumour","type":"exact"},{"name":"malignant tumor of supraglottis","type":"exact"},{"name":"malignant tumor of the supraglottis","type":"exact"},{"name":"malignant tumour of supraglottis","type":"exact"},{"name":"malignant tumour of the supraglottis","type":"exact"},{"name":"supraglottic part of larynx cancer","type":"exact"}],"termid":"MONDO:0001724","xrefs":{"Monarch":{"xref_id":"0001724"}}}


id: MOD:01492
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["Unimod:533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"(18)O isotope tagged reagent","termid":"MOD:01430"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ115","type":"related"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01492"}


id: PBO:0071408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 14","termid":"PBO:0071408"}


id: PBO:0080690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 2","termid":"PBO:0080690"}


id: PATO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow","termid":"PATO:0000324"}


id: PBO:0086789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; predicted to be palmitoylated","termid":"PBO:0086789"}


id: GO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body associated with the histone gene locus that is thought to contain all of the factors necessary for histone mRNA transcription and pre-mRNA processing. In Drosophila, U7 snRNP is located in the histone locus body rather than the distinct Cajal body.","definition_xrefs":["PMID:18927579","PMID:19620235","PMID:16533947","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"histone locus body","synonyms":[{"name":"HLB","type":"exact"}],"termid":"GO:0035363"}


id: MONDO:0006486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma derived from melanocytes of the uveal tract. It is the most common primary intraocular tumor in the United States and Western Europe. Similar to melanoma of the skin, it is rare in Africa and Asia. Diagnostic procedures include ophthalmoscopic exam, fluorescein angiography and ultrasound. Treatment includes: surgical excision of the eye, iridocyclectomy and tumor resection. Recent treatments also include radiotherapy or photo coagulation. Classification of uveal melanomas recognizes four cell types within these tumors: epithelioid, intermediate, mixed cell, and spindle cell types. The spindle cell type uveal melanomas are further sub-classified as spindle cell type A and spindle cell type B.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"uveal melanoma","secondary_identifiers":["MESH:C536494","NCIT:C7712","UMLS:C0220633","Orphanet:39044","MedDRA:10061252","GARD:8621","ONCOTREE:UM","EFO:1000616","MEDGEN:65077","OMIM:155720","DOID:6039"],"synonyms":[{"name":"choroidal melanoma","type":"related"},{"name":"intraocular melanoma","type":"exact"},{"name":"iris melanoma","type":"narrow"},{"name":"melanoma (disease) of uvea","type":"exact"},{"name":"melanoma of the uvea","type":"exact"},{"name":"melanoma of uvea","type":"exact"},{"name":"melanoma, uveal, malignant","type":"exact"},{"name":"uvea melanoma","type":"exact"},{"name":"uvea melanoma (disease)","type":"exact"},{"name":"uveal melanoma","type":"exact"}],"termid":"MONDO:0006486","xrefs":{"Monarch":{"xref_id":"0006486"}}}


id: PBO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae COQ8","termid":"PBO:0004301"}


id: PBO:0070040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1337, pseudogene","termid":"PBO:0070040"}


id: PBO:0031532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031532"}


id: MONDO:0006688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occupational lung disorder caused by exposure to cotton dust. It occurs more commonly in workers in the textile industry. Signs and symptoms include chest tightness, cough and wheezing. The symptoms tend to get worse at the beginning of the week and subside by the end of the week.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"byssinosis","secondary_identifiers":["MEDGEN:2769","GARD:5976","ICD9:504","UMLS:C0006542","MedDRA:10006822","MESH:D002095","DOID:10323","EFO:1000851","NCIT:C84605","SCTID:13151001","ICD10CM:J66.0"],"synonyms":[{"name":"Monday morning fever","type":"related"},{"name":"cotton dust pneumoconiosis","type":"exact"},{"name":"cotton mill fever","type":"exact"},{"name":"flax-dressers' disease","type":"exact"},{"name":"pneumoconiosis from cotton dust","type":"exact"},{"name":"stripper's asthma","type":"exact"},{"name":"textile worker's lung","type":"narrow"}],"termid":"MONDO:0006688","xrefs":{"Monarch":{"xref_id":"0006688"}}}


id: MONDO:0034082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete necrobiosis lipoidica (obsolete MONDO:0034082)","termid":"MONDO:0034082","xrefs":{"Monarch":{"xref_id":"0034082"}}}


id: PBO:0071969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B2","termid":"PBO:0071969"}


id: PBO:0117261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Pam17","termid":"PBO:0117261"}


id: FYPO:0007682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, exploratory movement, or disassembly of the Cdc42-containing cortical polarity patch is abnormal during mating.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"abnormal cortical polarity patch dynamics during mating","synonyms":[{"name":"abnormal cortical polarity patch dynamics during conjugation with cellular fusion","type":"exact"},{"name":"altered cortical polarity patch dynamics during mating","type":"exact"}],"termid":"FYPO:0007682"}


id: GO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of B cell anergy","termid":"GO:0002672"},{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell anergy","termid":"GO:0002917"},{"relation_name":"positively_regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral B cell anergy","synonyms":[{"name":"activation of peripheral B cell anergy","type":"narrow"},{"name":"stimulation of peripheral B cell anergy","type":"narrow"},{"name":"up regulation of peripheral B cell anergy","type":"exact"},{"name":"up-regulation of peripheral B cell anergy","type":"exact"},{"name":"upregulation of peripheral B cell anergy","type":"exact"}],"termid":"GO:0002919"}


id: PATO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a round end, the centre of which is depressed.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blunt","termid":"PATO:0001950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retuse","termid":"PATO:0001974"}


id: MONDO:0013101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 2","secondary_identifiers":["OMIM:613058","UMLS:C2751606","MEDGEN:442769"],"synonyms":[{"name":"BCC2","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0013101","xrefs":{"Monarch":{"xref_id":"0013101"}}}


id: MOD:01670
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-methyl-L-lysine.","definition_xrefs":["PubMed:16091367","PubMed:16195462","RESID:AA0524","PubMed:17260957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"halogenated lysine","termid":"MOD:01672"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-chloro-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(chloroamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-chlorolysine","type":"exact"},{"name":"N6-chloro-L-lysine","type":"exact"},{"name":"N6ClLys","type":"exact"},{"name":"epsilon-chlorolysine","type":"exact"},{"name":"lysine chloramine","type":"exact"}],"termid":"MOD:01670"}


id: PBO:0064636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate amidotransferase pseudogene 2","termid":"PBO:0064636"}


id: PR:O13999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug155 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 155 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.04c","synonyms":[{"name":"Spom972h-mug155","type":"exact"}],"termid":"PR:O13999"}


id: PBO:0076608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D26 antisense RNA 1","termid":"PBO:0076608"}


id: GO:0097261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin A4 + glutathione = eoxin C4.","definition_xrefs":["PMID:18184802","PMID:18647347","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"eoxin C4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161768"],"termid":"GO:0097261"}


id: GO:2000014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosperm development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosperm development","termid":"GO:2000014"}


id: GO:0097414
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion, 5 to 15 micrometers in diameter, with a dense core surrounded by a halo of 10 to 20 nm wide radially oriented alpha-synuclein fibrils.","definition_xrefs":["NIF_Subcellular:sao4749542545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"classical Lewy body","synonyms":[{"name":"brainstem Lewy body","type":"related"}],"termid":"GO:0097414"}


id: MONDO:0016499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of Guillain-Barré syndrome characterized by acute post-ganglionic sympathetic and parasympathetic failure presenting several weeks after acute infection with gastrointestinal symptoms (abdominal pain, vomiting, constipation, diarrhea, gastroparesis, ileus), orthostatic hypotension, erectile dysfunction, urinary frequency, urgency or retention, vasomotor instability with acrocyanosis and reduced salivation, lacrimation and sweating.","definition_xrefs":["Orphanet:231457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune autonomic ganglionopathy","secondary_identifiers":["MEDGEN:746161","UMLS:C2315246","GARD:20617","SCTID:430042004"],"synonyms":[{"name":"AAG","type":"exact"},{"name":"acute panautonomic GBS","type":"exact"},{"name":"acute panautonomic Guillain-Barre syndrome","type":"exact"},{"name":"acute panautonomic Guillain-Barré syndrome","type":"exact"},{"name":"acute panautonomic neuropathy","type":"exact"},{"name":"acute pandysautonomia","type":"exact"},{"name":"autoimmune autonomic neuropathy","type":"exact"},{"name":"idiopathic subacute autonomic neuropathy","type":"exact"}],"termid":"MONDO:0016499","xrefs":{"Monarch":{"xref_id":"0016499"}}}


id: GO:0032483
data:
  {"annotated_genes":["SJAG_04329","SJAG_03488"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70301,75265],"is_not":false,"summary":null,"term":"GO:0032483"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rab protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rab protein signal transduction","termid":"GO:0032482"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Rab protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032483","terms_by_termid":{"GO:0032483":null}}


id: PBO:0081370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 208","termid":"PBO:0081370"}


id: PBO:0077256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 7","termid":"PBO:0077256"}


id: PBO:0078950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 2-1","termid":"PBO:0078950"}


id: GO:0004477
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76104,76935],"is_not":false,"summary":null,"term":"GO:0004477"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate.","definition_xrefs":["EC:3.5.4.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"methenyltetrahydrofolate cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-200740","MetaCyc:METHENYLTHFCYCLOHYDRO-RXN","Reactome:R-HSA-200661","RHEA:23700","Reactome:R-HSA-6801328"],"synonyms":[{"name":"5,10-methenyl-THF cyclohydrolase activity","type":"exact"},{"name":"5,10-methenyltetrahydrofolate 5-hydrolase (decyclizing)","type":"related"},{"name":"citrovorum factor cyclodehydrase activity","type":"related"},{"name":"formyl-methenyl-methylenetetrahydrofolate synthetase (combined)","type":"related"}],"termid":"GO:0004477","terms_by_termid":{"GO:0004477":null}}


id: PBO:0091756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2049892delT","termid":"PBO:0091756"}


id: MONDO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A genetic disease that is the result of one or more abnormal alleles and may be dominant (a single copy of the abnormal allele is sufficient to give rise to the disease), semi-dominant, or recessive (requiring both copies of the gene to have an abnormal allele).","definition_xrefs":["DOID:0050177","DO:wk,ls"],"gene_count":0,"genotype_count":0,"name":"obsolete monogenic disease (obsolete MONDO:0000275)","termid":"MONDO:0000275","xrefs":{"Monarch":{"xref_id":"0000275"}}}


id: GO:1900339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from formic acid","termid":"GO:1900339"}


id: MONDO:0012192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Permanent neonatal diabetes mellitus-pancreatic and cerebellar agenesis syndrome is characterized by neonatal diabetes mellitus associated with cerebellar and/or pancreatic agenesis.","definition_xrefs":["Orphanet:65288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"neonatal diabetes mellitus","termid":"MONDO:0016391"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0020022","MONDO:0005015"],"is_obsolete":false,"name":"permanent neonatal diabetes mellitus-pancreatic and cerebellar agenesis syndrome","secondary_identifiers":["GARD:16670","MESH:C563796","OMIM:609069","MEDGEN:332288","UMLS:C1836780"],"synonyms":[{"name":"diabetes mellitus, permanent neonatal, with cerebellar agenesis","type":"related"},{"name":"paca","type":"related"},{"name":"pancreatic and cerebellar agenesis","type":"exact"}],"termid":"MONDO:0012192","xrefs":{"Monarch":{"xref_id":"0012192"}}}


id: FYPO:0005569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the establishment or maintenance of cell polarity is abnormal when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0005568"],"is_obsolete":false,"name":"abnormal cell polarity during G0 to G1 transition","synonyms":[{"name":"abnormal cell polarity during cell cycle re-entry","type":"exact"},{"name":"abnormal cell polarity during cell quiescence to G1 transition","type":"exact"},{"name":"abnormal cell polarity during exit from cell quiescence","type":"exact"},{"name":"abnormal cell polarity during quiescence to G1 transition","type":"exact"},{"name":"abnormal cell polarity during recovery from quiescence","type":"exact"},{"name":"abnormal cell polarity process during G0 to G1 transition","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during G0 to G1 transition","type":"exact"},{"name":"cell polarity defects during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005569"}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: MONDO:0031014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the body fundic mucosa of the stomach. It results from the development of autoantibodies against the parietal and chief cells. It is associated with the presence of intestinal metaplasia and an increased risk of developing gastric carcinoma.","definition_xrefs":["NCIT:C95752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune gastritis","secondary_identifiers":["MEDGEN:854482","UMLS:C3887639","DOID:0040090","icd11.foundation:248006617"],"synonyms":[{"name":"autoimmune gastritis (disease)","type":"exact"}],"termid":"MONDO:0031014","xrefs":{"Monarch":{"xref_id":"0031014"}}}


id: GO:0034204
data:
  {"annotated_genes":["SJAG_01470","SJAG_02897","SJAG_00576","SJAG_02516","SJAG_03209","SJAG_02581","SJAG_02957","SJAG_00587","SJAG_01731","SJAG_00589","SJAG_02943","SJAG_00018","SJAG_03050","SJAG_04734","SJAG_00669","SJAG_03774","SJAG_01945","SJAG_05209","SJAG_01095","SJAG_02114","SJAG_06440","SJAG_02132","SJAG_00230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102697,68999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[77366,94784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[90876,90874,60066,90875,75156,73393,90877,90882,74898,109891,72512,73233,90880,99832,90879,90878,90881,101646,102576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[73569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The translocation, or flipping, of lipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"regulation of membrane lipid distribution","termid":"GO:0097035"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03209":null,"SJAG_03774":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"intramembrane lipid transfer","type":"exact"}],"termid":"GO:0034204","terms_by_termid":{"GO:0017121":null,"GO:0034203":null,"GO:0045332":null,"GO:0140331":null}}


id: FYPO:0003460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose level during cellular response to oxidative stress","synonyms":[{"name":"decreased cellular trehalose level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during oxidative stress response","type":"exact"},{"name":"decreased cellular trehalose level during vegetative growth and during cellular response to oxidative stress","type":"exact"},{"name":"decreased cellular trehalose level in response to oxidative stress","type":"exact"},{"name":"decreased trehalose accumulation during cellular response to oxidative stress","type":"related"},{"name":"reduced cellular trehalose level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0003460"}


id: PR:O59824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent zinc metalloprotease FtsH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent zinc metalloprotease YME1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.04c","secondary_identifiers":["UniProtKB:O59824"],"synonyms":[{"name":"Spom972h-ftsH","type":"exact"}],"termid":"PR:O59824"}


id: GO:0106062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exit from meiosis.","definition_xrefs":["GOC:al","PMID:11493649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exit from meiosis","termid":"GO:0106060"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle phase transition","termid":"GO:1901995"},{"relation_name":"positively_regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of exit from meiosis","termid":"GO:0106062"}


id: PBO:0086923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyridoxine (pyridoxamine) phosphate oxidase; has homologs in E. coli and Myxococcus xanthus; transcription is under the general control of nitrogen metabolism","termid":"PBO:0086923"}


id: MONDO:1011899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar degeneration, non-human animal","secondary_identifiers":["OMIA:002454"],"termid":"MONDO:1011899","xrefs":{"Monarch":{"xref_id":"1011899"}}}


id: PATO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000896 f2 fertility value (obsolete PATO:0000896)","termid":"PATO:0000896"}


id: PBO:0053304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28A pseudogene 1","termid":"PBO:0053304"}


id: PBO:0073443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor proline and glutamine rich pseudogene 1","termid":"PBO:0073443"}


id: PBO:0058553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6132","termid":"PBO:0058553"}


id: PBO:0062383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 1 pseudogene","termid":"PBO:0062383"}


id: MONDO:1012915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis that occurs in Rhesus monkey due to a mutation in the TARDBP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis, non-human animal","termid":"MONDO:1012954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, TARDBP-related, Rhesus monkey","secondary_identifiers":["OMIA:002492-9544"],"termid":"MONDO:1012915","xrefs":{"Monarch":{"xref_id":"1012915"}}}


id: GO:0003269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation (obsolete GO:0003269)","synonyms":[{"name":"BMP signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"BMP signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003269"}


id: GO:2001097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a laminaritrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"laminaritriose transport","termid":"GO:2001097"}


id: FYPO:0001267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur when the cell is subject to a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear export","termid":"FYPO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished nuclear export during cellular hypotonic salinity response","synonyms":[{"name":"abolished nuclear export during cellular hypotonic salinity response during mitotic cell cycle","type":"related"},{"name":"absent nuclear export during cellular hypotonic salinity response","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished during vegetative growth","type":"exact"},{"name":"nuclear export in response to salt starvation abolished","type":"exact"}],"termid":"FYPO:0001267"}


id: MONDO:0008319
data:
  {"annotated_genes":["SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85517],"is_not":false,"summary":null,"term":"MONDO:0008319"}]},"cv_name":"mondo","definition":"Erythropoietic protoporphyria caused by a compound heterozygous or homozygous mutation in the gene encoding ferrochelatase (FECH) on chromosome 18q21.","definition_xrefs":["OMIM:177000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal erythropoietic protoporphyria","termid":"MONDO:0019263"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005093","MONDO:0004335","MONDO:0019142","MONDO:0005066"],"is_obsolete":false,"name":"protoporphyria, erythropoietic, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1643471","NANDO:1200815","NANDO:2201266","NCIT:C84698","UMLS:C4692546"],"synonyms":[{"name":"EPP","type":"related"},{"name":"EPP1","type":"exact"},{"name":"erythrohepatic protoporphyria","type":"related"},{"name":"erythropoietic protoporphyria","type":"broad"},{"name":"ferrochelatase deficiency","type":"exact"},{"name":"heme synthetase deficiency","type":"exact"},{"name":"protoporphyria, erythropoietic","type":"broad"},{"name":"protoporphyria, erythropoietic, 1","type":"exact"}],"termid":"MONDO:0008319","terms_by_termid":{"MONDO:0008319":null},"xrefs":{"Monarch":{"xref_id":"0008319"}}}


id: GO:0098736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the force of heart muscle contraction.","definition_xrefs":["GOC:BHF","PMID:17242280","GOC:dos","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction","termid":"GO:0098736"}


id: GO:0110104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of generating multiple mRNA molecules with variable 3'-end length formation from a given pre-mRNA by differential use of cleavage and polyadenylation signals (pA signals).","definition_xrefs":["PMID:28453393","PMID:29276085","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"mRNA alternative polyadenylation","termid":"GO:0110104"}


id: PBO:0003380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage response protein (predicted)","termid":"PBO:0003380"}


id: GO:0035477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angioblast cell migration involved in selective angioblast sprouting.","definition_xrefs":["PMID:19815777","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035477"}


id: GO:0071502
data:
  {"annotated_genes":["SJAG_02381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91169],"is_not":false,"summary":null,"term":"GO:0071502"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to temperature stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to thermal stimulus","type":"exact"}],"termid":"GO:0071502","terms_by_termid":{"GO:0071502":null}}


id: PBO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_S-phase_DNA_damage_checkpoint","termid":"PBO:0031419"}


id: PBO:0084457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase in the N-linked glycosylation pathway; catalyzes two consecutive steps in N-linked glycosylation pathway; mutants exhibit temperature-sensitive growth and abnormal accumulation of lipid-linked oligosaccharide Man2GlcNAc2-PP-Dol; mutations of human ALG2 cause congenital myasthenic syndrome; human ALG2 complements temperature sensitivity and dolichol-linked oligosaccharide biosynthesis defect of alg2-1 mutant, but mutant form from a patient with CDG-Ii fails to complement","termid":"PBO:0084457"}


id: GO:0071317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"}


id: GO:0051783
data:
  {"annotated_genes":["SJAG_03327","SJAG_02058","SJAG_04259","SJAG_00266","SJAG_02380","SJAG_03681","SJAG_04287","SJAG_04999","SJAG_04968","SJAG_01330","SJAG_02498","SJAG_04884","SJAG_00364","SJAG_04126","SJAG_02169","SJAG_01805","SJAG_03126","SJAG_01082","SJAG_02451","SJAG_00666","SJAG_01680","SJAG_01679","SJAG_02712","SJAG_02336","SJAG_03353","SJAG_03438","SJAG_04699","SJAG_01297","SJAG_03048","SJAG_01837","SJAG_00883","SJAG_04573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[116290,107603,112349,99950,104256,108633,91080,114170,114658],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[106693,114886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[106990,114648,116449,89416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[110289,114889,115948,102160,99791,106695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[94561],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[108348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[114175],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[117069],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[94166,111763,98056,102469,100504,102742,115158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[89418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[101700],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[97294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0040020"},{"annotations":[111315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007088"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02058":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02712":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051783","terms_by_termid":{"GO:0007088":null,"GO:0007094":null,"GO:0010845":null,"GO:0010846":null,"GO:0040020":null,"GO:0045128":null,"GO:0045842":null,"GO:0051598":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: MONDO:0800455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Birt-Hogg-Dube syndrome caused by the mutations in PRDM10.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Birt-Hogg-Dube syndrome","termid":"MONDO:0800444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome 2","secondary_identifiers":["OMIM:620459","UMLS:C5830676","MEDGEN:1841312"],"synonyms":[{"name":"BHD2","type":"exact"}],"termid":"MONDO:0800455","xrefs":{"Monarch":{"xref_id":"0800455"}}}


id: PBO:0026664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026664"}


id: GO:0052228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host protein (obsolete GO:0052228)","termid":"GO:0052228"}


id: MONDO:0019804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital tracheomalacia is a rare condition where the trachea is soft and flexible causing the tracheal wall to collapse when exhaling, coughing or crying, that usually presents in infancy, and that is characterized by stridor and noisy breathing or upper respiratory infections. Tracheomalacia improves by the age of 18-24 months.","definition_xrefs":["Orphanet:95430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital tracheomalacia","secondary_identifiers":["HP:0002779","NANDO:2200195","MedDRA:10010654","icd11.foundation:303133490","UMLS:C0392109","MEDGEN:140261","SCTID:95467005","NORD:2028","DOID:0060313","NCIT:C98634","ICD9:748.3","icd11.foundation:1616705280","GARD:10515","MESH:D055090"],"synonyms":[{"name":"Congenital Tracheomalacia","type":"exact"},{"name":"congenital major airway collapse","type":"exact"},{"name":"congenital tracheomalacia","type":"exact"},{"name":"tracheomalacia","type":"related"},{"name":"tracheomalacia, congenital","type":"exact"},{"name":"type 1 tracheomalacia","type":"related"}],"termid":"MONDO:0019804","xrefs":{"Monarch":{"xref_id":"0019804"}}}


id: GO:0044027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide associated with the transcription start site of genes.","definition_xrefs":["Wikipedia:Cpg_island","PMID:11898023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression, epigenetic","termid":"GO:0045814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of gene expression via chromosomal CpG island methylation","synonyms":[{"name":"DNA hypermethylation of CG island","type":"related"},{"name":"DNA hypermethylation of CpG island","type":"exact"},{"name":"epigenetic regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"hypermethylation of CpG island","type":"exact"},{"name":"maintenance of DNA methylation","type":"broad"},{"name":"negative regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"negative regulation of gene expression via CpG island methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CG dinucleotide methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CpG dinucleotide methylation","type":"exact"},{"name":"negative regulation of gene expression via chromosomal DNA cytosine methylation","type":"exact"}],"termid":"GO:0044027"}


id: PBO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm2","termid":"PBO:0003515"}


id: PBO:0060378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin regulatory factor","termid":"PBO:0060378"}


id: GO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactoyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["RHEA:34691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactoyl-CoA dehydratase activity","secondary_identifiers":["MetaCyc:LACTOYL-COA-DEHYDRATASE-RXN","EC:4.2.1.54","UM-BBD_reactionID:r0086"],"synonyms":[{"name":"acrylyl coenzyme A hydratase activity","type":"related"},{"name":"lactoyl coenzyme A dehydratase activity","type":"related"},{"name":"lactoyl-CoA hydro-lyase (acryloyl-CoA-forming)","type":"related"},{"name":"lactoyl-CoA hydro-lyase activity","type":"related"},{"name":"lactyl CoA dehydratase activity","type":"related"},{"name":"lactyl-coenzyme A dehydrase activity","type":"related"}],"termid":"GO:0018819"}


id: MONDO:0012715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 12","secondary_identifiers":["UMLS:C2673676","MEDGEN:388698","OMIM:611706"],"synonyms":[{"name":"MGR12","type":"exact"},{"name":"migraine with or without aura, susceptibility to, 12","type":"exact"},{"name":"migraine, with or without aura, susceptibility to, 12","type":"exact"}],"termid":"MONDO:0012715","xrefs":{"Monarch":{"xref_id":"0012715"}}}


id: PBO:0046976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM86B2 divergent transcript","termid":"PBO:0046976"}


id: FYPO:0001787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of sterol binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal lipid binding","termid":"FYPO:0006942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal sterol binding","synonyms":[{"name":"normal cholesterol binding","type":"narrow"},{"name":"normal ergosterol binding","type":"narrow"}],"termid":"FYPO:0001787"}


id: GO:1900639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asperfuranone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asperfuranone biosynthetic process","termid":"GO:1900637"},{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"asperfuranone biosynthetic process","termid":"GO:1900554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of asperfuranone biosynthetic process","synonyms":[{"name":"activation of asperfuranone anabolism","type":"exact"},{"name":"activation of asperfuranone biosynthesis","type":"exact"},{"name":"activation of asperfuranone biosynthetic process","type":"narrow"},{"name":"activation of asperfuranone formation","type":"exact"},{"name":"activation of asperfuranone synthesis","type":"exact"},{"name":"positive regulation of asperfuranone anabolism","type":"exact"},{"name":"positive regulation of asperfuranone biosynthesis","type":"exact"},{"name":"positive regulation of asperfuranone formation","type":"exact"},{"name":"positive regulation of asperfuranone synthesis","type":"exact"},{"name":"up regulation of asperfuranone anabolism","type":"exact"},{"name":"up regulation of asperfuranone biosynthesis","type":"exact"},{"name":"up regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"up regulation of asperfuranone formation","type":"exact"},{"name":"up regulation of asperfuranone synthesis","type":"exact"},{"name":"up-regulation of asperfuranone anabolism","type":"exact"},{"name":"up-regulation of asperfuranone biosynthesis","type":"exact"},{"name":"up-regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"up-regulation of asperfuranone formation","type":"exact"},{"name":"up-regulation of asperfuranone synthesis","type":"exact"},{"name":"upregulation of asperfuranone anabolism","type":"exact"},{"name":"upregulation of asperfuranone biosynthesis","type":"exact"},{"name":"upregulation of asperfuranone biosynthetic process","type":"exact"},{"name":"upregulation of asperfuranone formation","type":"exact"},{"name":"upregulation of asperfuranone synthesis","type":"exact"}],"termid":"GO:1900639"}


id: PBO:0088044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme involved in ERAD; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway; ER-associated protein degradation is also known as ERAD","termid":"PBO:0088044"}


id: MONDO:0800428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dengue shock syndrome, susceptibility to","secondary_identifiers":["UMLS:C3280585","MEDGEN:482215"],"termid":"MONDO:0800428","xrefs":{"Monarch":{"xref_id":"0800428"}}}


id: PBO:0055531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2966","termid":"PBO:0055531"}


id: PBO:0056363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK6 divergent transcript","termid":"PBO:0056363"}


id: PBO:0081882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 830","termid":"PBO:0081882"}


id: GO:0043375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell becomes committed to becoming a CD8-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"is_a","term_name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","termid":"GO:0043369"},{"relation_name":"part_of","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD8-positive, alpha-beta T cell fate commitment","type":"exact"},{"name":"CD8-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD8-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD8-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0043375"}


id: GO:0036034
data:
  {"annotated_genes":["SJAG_00973","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88566,106066],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mediator complex. The mediator complex is a protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:17641689","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036034","terms_by_termid":{"GO:2001178":null}}


id: PR:Q9P7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03873","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.16c","secondary_identifiers":["UniProtKB:Q9P7K8"],"synonyms":[{"name":"Spom972h-SUPT4H1","type":"exact"},{"name":"chromatin elongation factor spt4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K8"}


id: PBO:0058405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4775","termid":"PBO:0058405"}


id: PBO:0052152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 2","termid":"PBO:0052152"}


id: SO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One arm of a compound chromosome.","direct_ancestors":[{"relation_name":"is_a","term_name":"compound_chromosome","termid":"SO:1000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compound_chromosome_arm","synonyms":[{"name":"compound chromosome arm","type":"exact"}],"termid":"SO:0000060"}


