# terms

id: GO:0019520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"aldonic acid metabolic process","synonyms":[{"name":"aldonic acid metabolism","type":"exact"}],"termid":"GO:0019520"}


id: PBO:0029255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_DNA_replication","termid":"PBO:0029255"}


id: PR:Q9P6J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02335","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized deaminase C1683.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.02","secondary_identifiers":["UniProtKB:Q9P6J8"],"synonyms":[{"name":"Spom972h-ADA","type":"exact"}],"termid":"PR:Q9P6J8"}


id: PBO:0045307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 alpha","termid":"PBO:0045307"}


id: GO:0000049
data:
  {"annotated_genes":["SJAG_03584","SJAG_04409","SJAG_00195","SJAG_01248","SJAG_04856","SJAG_02637","SJAG_01704","SJAG_02288","SJAG_03629","SJAG_01877","SJAG_04993","SJAG_02352","SJAG_00488","SJAG_01797","SJAG_03545","SJAG_02615","SJAG_02977","SJAG_03626","SJAG_04285","SJAG_01302","SJAG_00325","SJAG_00358","SJAG_02263","SJAG_04175","SJAG_04680","SJAG_01314","SJAG_03071","SJAG_02042","SJAG_01074","SJAG_04700","SJAG_00579","SJAG_00466","SJAG_00936","SJAG_04756","SJAG_02099","SJAG_04762","SJAG_04181","SJAG_04582","SJAG_00886","SJAG_03932","SJAG_02661","SJAG_00169","SJAG_03461"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58975,59163,60818,60855,61221,61505,62174,63233,63721,64414,68030,68282,69351,69492,71047,71539,72194,72593,72728,72739,72837,73278,73873,73998,77171,77899,79181,79838,79937,88089,94841,95075,98843,102631,103256,106159,108522,110058,112541,113260,118320],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[97585,105794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to a transfer RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00195":null,"SJAG_00325":null,"SJAG_00358":null,"SJAG_00466":null,"SJAG_00488":null,"SJAG_00579":null,"SJAG_00886":null,"SJAG_00936":null,"SJAG_01074":null,"SJAG_01248":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01704":null,"SJAG_01797":null,"SJAG_01877":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02263":null,"SJAG_02288":null,"SJAG_02352":null,"SJAG_02615":null,"SJAG_02637":null,"SJAG_02661":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03461":null,"SJAG_03545":null,"SJAG_03584":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03932":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04582":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04756":null,"SJAG_04762":null,"SJAG_04856":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000946"],"synonyms":[{"name":"base pairing with tRNA","type":"narrow"}],"termid":"GO:0000049","terms_by_termid":{"GO:0000049":null,"GO:1990856":null}}


id: PR:Q9UTS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlc1 gene.","definition_xrefs":["UniProtKB:Q9UTS6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.08","synonyms":[{"name":"Spom972h-dlc1","type":"exact"},{"name":"TCTEX-1 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS6"}


id: PBO:0044012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 1","termid":"PBO:0044012"}


id: GO:0160052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic cell cycle process in which the nuclear envelope, including nuclear pores, is equally distributed to the two daughter cells during the mitotic cell cycle.","definition_xrefs":["PMID:24184107","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear envelope segregation","references_by_uniquename":{"PMID:24184107":null},"termid":"GO:0160052"}


id: GO:0071268
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of homocysteine, 2-amino-4-sulfanylbutanoic acid.","definition_xrefs":["GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"homocysteine metabolic process","termid":"GO:0050667"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"homocysteine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homocysteine anabolism","type":"exact"},{"name":"homocysteine biosynthesis","type":"exact"},{"name":"homocysteine formation","type":"exact"},{"name":"homocysteine synthesis","type":"exact"}],"termid":"GO:0071268","terms_by_termid":{"GO:0071269":null}}


id: PBO:0048587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 1","termid":"PBO:0048587"}


id: GO:0034464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ciliary protein complex involved in cilium biogenesis. It consists of at least seven Bardet-Biedl syndrome (BBS) proteins and BBIP10. It moves in association with IFT trains through cilia (likely as an IFT-A/B adaptor or cargo), and is required for the integrity of IFT-A and IFT-B.","definition_xrefs":["PMID:15231740","GOC:BHF","GOC:cilia","PMID:17574030","PMID:26498262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BBSome","synonyms":[{"name":"Bardet-Biedl syndrome complex","type":"exact"}],"termid":"GO:0034464"}


id: PBO:0088123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar integral membrane protein required for efflux of amino acids; required for efflux of amino acids during autophagic body breakdown in the vacuole; null mutation causes a gradual loss of viability during starvation","termid":"PBO:0088123"}


id: GO:0072316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of alpha-glucans in the ascus wall that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-glucan catabolic process involved in ascospore release from ascus (obsolete GO:0072316)","synonyms":[{"name":"alpha-glucan breakdown involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan catabolism involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan degradation involved in ascospore release from ascus","type":"exact"}],"termid":"GO:0072316"}


id: GO:0044543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in zymogen activation in another organism (obsolete GO:0044543)","synonyms":[{"name":"envenomation resulting in zymogen activation in other organism","type":"exact"}],"termid":"GO:0044543"}


id: FYPO:0000282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a high temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at high temperature (obsolete FYPO:0000282)","synonyms":[{"name":"cell viable at high temperature","type":"exact"},{"name":"viable cell at high temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at high temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0000282"}


id: PBO:0055711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMBR1 domain containing 1","termid":"PBO:0055711"}


id: PBO:0029101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sulfate_import","termid":"PBO:0029101"}


id: MONDO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the peritoneum","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneum cancer","secondary_identifiers":["DOID:1725","UMLS:C0153467","ICD9:158.9","SCTID:363492001","ICD9:158.8","NCIT:C3538","ICD9:159.8","MEDGEN:102270"],"synonyms":[{"name":"cancer of peritoneum","type":"exact"},{"name":"cancer of the peritoneum","type":"exact"},{"name":"malignant neoplasm of peritoneum","type":"exact"},{"name":"malignant peritoneal neoplasm","type":"exact"},{"name":"malignant peritoneum neoplasm","type":"exact"},{"name":"peritoneal cancer","type":"exact"},{"name":"peritoneal cavity cancer","type":"exact"},{"name":"peritoneal neoplasm","type":"related"},{"name":"peritoneum cancer","type":"exact"}],"termid":"MONDO:0002087","xrefs":{"Monarch":{"xref_id":"0002087"}}}


id: MONDO:0006323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of testicular cancers that begin in the germ cells (cells that give rise to sperm). Nonseminomas are identified by the type of cell in which they begin and include embryonal carcinoma, teratoma, choriocarcinoma, and yolk sac carcinoma.","definition_xrefs":["EFO:1000401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-seminomatous lesion","secondary_identifiers":["MEDGEN:233785","UMLS:C1335059"],"termid":"MONDO:0006323","xrefs":{"Monarch":{"xref_id":"0006323"}}}


id: PBO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Mob2","termid":"PBO:0005169"}


id: PBO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.85","termid":"PBO:0003840"}


id: PBO:0072972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 2","termid":"PBO:0072972"}


id: MONDO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acquired immunodeficiency","secondary_identifiers":["MEDGEN:1843453","GARD:21359","icd11.foundation:609223181","Orphanet:310050","UMLS:C0596032"],"termid":"MONDO:0017769","xrefs":{"Monarch":{"xref_id":"0017769"}}}


id: PBO:0052382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF23 and PAQR5 antisense RNA 1","termid":"PBO:0052382"}


id: GO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse structural plasticity. Synapse structural plasticity is a type of cytoskeletal remodeling; this remodeling is induced by stimuli that can lead to long term potentiation and it can be activity-dependent or -independent. Examples of cytoskeletal changes include the formation of new spines and increase in spine size; this can be accompanied by the insertion of greater numbers of glutamate (or other neurotransmitter) receptors into the post-synaptic membrane.","definition_xrefs":["PMID:11063967","PMID:14976517","PMID:9884123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structural plasticity","synonyms":[{"name":"regulation of synaptic structural plasticity","type":"exact"}],"termid":"GO:0051823"}


id: MONDO:0007279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 17q24.","definition_xrefs":["PMID:7704021","DOID:0110260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerulean cataract","termid":"MONDO:0020374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 7","secondary_identifiers":["GARD:15046","OMIM:115660"],"synonyms":[{"name":"CCA1","type":"narrow"},{"name":"CTRCT7","type":"exact"},{"name":"cataract 7","type":"exact"},{"name":"cataract 7, cerulean type","type":"related"},{"name":"cataract type 7","type":"exact"},{"name":"cataract, congenital, cerulean type, 1","type":"related"},{"name":"cerulean type cataract 7","type":"narrow"},{"name":"congenital cerulean type cataract 1","type":"narrow"}],"termid":"MONDO:0007279","xrefs":{"Monarch":{"xref_id":"0007279"}}}


id: PBO:0075841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 2","termid":"PBO:0075841"}


id: GO:0045578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of B cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"negatively_regulates","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell differentiation","synonyms":[{"name":"down regulation of B cell differentiation","type":"exact"},{"name":"down-regulation of B cell differentiation","type":"exact"},{"name":"downregulation of B cell differentiation","type":"exact"},{"name":"inhibition of B cell differentiation","type":"narrow"},{"name":"negative regulation of B cell development","type":"related"},{"name":"negative regulation of B lymphocyte differentiation","type":"exact"},{"name":"negative regulation of B-cell differentiation","type":"exact"},{"name":"negative regulation of B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045578"}


id: PBO:0013004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion","termid":"PBO:0013004"}


id: PBO:0059285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42","termid":"PBO:0059285"}


id: GO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction","secondary_identifiers":["NIF_Subcellular:sao1124888485","Wikipedia:Neuromuscular_junction"],"synonyms":[{"name":"NMJ","type":"related"},{"name":"motor endplate","type":"related"}],"termid":"GO:0031594"}


id: GO:0009213
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate catabolic process","termid":"GO:0009149"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009213","terms_by_termid":{"GO:0046081":null}}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["UniProtKB:Q10413","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: GO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-hydroxyproline from one side of a membrane to the other.","definition_xrefs":["PMID:14502423","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-hydroxyproline transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-6784213"],"synonyms":[{"name":"4-hydroxyproline transmembrane transporter activity","type":"broad"}],"termid":"GO:0034590"}


id: PBO:0066185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 8A","termid":"PBO:0066185"}


id: GO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the provision of a combination of complex inanimate and social stimulations in the organism's housing environment.","definition_xrefs":["PMID:25934034","GOC:sl","PMID:23644055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to environmental enrichment","synonyms":[{"name":"response to the introduction of novel objects","type":"narrow"}],"termid":"GO:0090648"}


id: GO:0042758
data:
  {"annotated_genes":["SJAG_04570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114150],"is_not":false,"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:20043225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"long-chain fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acid breakdown","type":"exact"},{"name":"long-chain fatty acid catabolism","type":"exact"},{"name":"long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042758","terms_by_termid":{"GO:0042758":null}}


id: MONDO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurodevelopmental disorder with brain, liver, and lung abnormalities (obsolete MONDO:0060722)","termid":"MONDO:0060722","xrefs":{"Monarch":{"xref_id":"0060722"}}}


id: PBO:0029836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_bundles_present_in_increased_numbers","termid":"PBO:0029836"}


id: GO:0021860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a pyramidal neuron from its initial formation to its mature state.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"pyramidal neuron differentiation","termid":"GO:0021859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramidal neuron development","synonyms":[{"name":"projection neuron development","type":"broad"}],"termid":"GO:0021860"}


id: PBO:0053267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A1","termid":"PBO:0053267"}


id: GO:0030201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heparan sulfate proteoglycans, which consist of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid, the former being either sulfated or deacetylated on its amino group as well as sulfated on one of its hydroxyl groups, and the latter being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids.","definition_xrefs":["PMID:27241222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan metabolic process","synonyms":[{"name":"heparan sulfate proteoglycan metabolism","type":"exact"},{"name":"heparan sulphate proteoglycan metabolic process","type":"exact"},{"name":"heparan sulphate proteoglycan metabolism","type":"exact"},{"name":"heparin proteoglycan metabolic process","type":"related"}],"termid":"GO:0030201"}


id: PBO:0027556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_conjugation_frequency","termid":"PBO:0027556"}


id: PBO:0050082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 2","termid":"PBO:0050082"}


id: PBO:0065060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl endopeptidase like","termid":"PBO:0065060"}


id: PBO:0011121
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Chromsome segregation in Meiosis","termid":"PBO:0011121"}


id: MONDO:0004239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of cervical squamous cell carcinoma characterized by the presence of keratin pearls. Intercellular bridges and cytoplasmic keratinization are usually present.","definition_xrefs":["NCIT:C40187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"},{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical keratinizing squamous cell carcinoma","secondary_identifiers":["DOID:7483","MEDGEN:309255","UMLS:C1517658"],"synonyms":[{"name":"cervical keratinizing squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004239","xrefs":{"Monarch":{"xref_id":"0004239"}}}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: PBO:0091300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091300"}


id: GO:0110059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:23072816","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell differentiation","termid":"GO:0110059"}


id: MONDO:0032757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 41","secondary_identifiers":["GARD:16353","MEDGEN:1680404","OMIM:618449","DOID:0111858","UMLS:C5193103"],"synonyms":[{"name":"CILD41","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 41","type":"related"}],"termid":"MONDO:0032757","xrefs":{"Monarch":{"xref_id":"0032757"}}}


id: PBO:0050020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP alpha 1","termid":"PBO:0050020"}


id: PBO:0064577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POT1 antisense RNA 1","termid":"PBO:0064577"}


id: PBO:0038453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase","termid":"PBO:0038453"}


id: PBO:0090556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone for ribosomal protein Rpl4, TPR repeat protein Acl4","termid":"PBO:0090556"}


id: MONDO:0012251
data:
  {"annotated_genes":["SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85554],"is_not":false,"summary":null,"term":"MONDO:0012251"}]},"cv_name":"mondo","definition":"MEDNIK syndrome, previously known as Erythrokeratodermia Variabilis type 3 (EKV3), is characterized by intellectual deficit, enteropathy, sensorineural hearing loss, peripheral neuropathy, lamellar and erythrodermic ichthyosis, and keratodermia (MEDNIK stands for Mental retardation, Enteropathy, Deafness, peripheral Neuropathy, Ichtyosis, Keratodermia).","definition_xrefs":["Orphanet:171851"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"},{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"MEDNIK syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:322893","GARD:17072","MESH:C563739","SCTID:722035007","UMLS:C1836330","DOID:0060483","OMIM:609313"],"synonyms":[{"name":"MEDNIK","type":"related"},{"name":"erythrokeratodermia variabilis 3","type":"exact"},{"name":"erythrokeratodermia variabilis, Kamouraska type","type":"exact"},{"name":"intellectual disability, enteropathy, deafness, neuropathy, ichthyosis, keratodermia","type":"exact"},{"name":"intellectual disability, enteropathy, deafness, peripheral neuropathy, ichthyosis, and keratoderma","type":"related"},{"name":"intellectual disability-enteropathy-deafness-peripheral neuropathy-ichthyosis-keratodermia syndrome","type":"exact"},{"name":"mental retardation, enteropathy, deafness, neuropathy, ichthyosis, keratodermia","type":"exact"},{"name":"mental retardation, enteropathy, deafness, peripheral neuropathy, ichthyosis, and keratoderma","type":"related"}],"termid":"MONDO:0012251","terms_by_termid":{"MONDO:0012251":null},"xrefs":{"Monarch":{"xref_id":"0012251"}}}


id: PBO:0066468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 5","termid":"PBO:0066468"}


id: GO:0019484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"beta-alanine metabolic process","termid":"GO:0019482"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"beta-alanine catabolic process","synonyms":[{"name":"beta-alanine breakdown","type":"exact"},{"name":"beta-alanine catabolism","type":"exact"},{"name":"beta-alanine degradation","type":"exact"}],"termid":"GO:0019484"}


id: PBO:0069517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 786, pseudogene","termid":"PBO:0069517"}


id: GO:0047930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosaminate = 2-dehydro-3-deoxy-D-gluconate + NH3.","definition_xrefs":["EC:4.3.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucosaminate ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.21-RXN","RHEA:12488","GO:0050443"],"synonyms":[{"name":"2-amino-2-deoxy-D-gluconate ammonia-lyase activity","type":"related"},{"name":"2-amino-2-deoxy-D-gluconate hydro-lyase (deaminating) activity","type":"related"},{"name":"D-glucosaminate ammonia-lyase (isomerizing; 2-dehydro-3-deoxy-D-gluconate-forming)","type":"related"},{"name":"D-glucosaminate ammonia-lyase activity","type":"related"},{"name":"D-glucosaminate dehydratase activity","type":"related"},{"name":"D-glucosaminic acid dehydrase activity","type":"related"},{"name":"acetylenemonocarboxylic acid hydrase activity","type":"related"},{"name":"aminodeoxygluconate ammonia-lyase activity","type":"exact"},{"name":"aminodeoxygluconate dehydratase activity","type":"exact"},{"name":"glucosaminic dehydrase activity","type":"related"}],"termid":"GO:0047930"}


id: PR:O13745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb1 gene.","definition_xrefs":["UniProtKB:O13745","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.11c","synonyms":[{"name":"RNA polymerase II transcription factor B 73 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p73 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tfb1","type":"exact"}],"termid":"PR:O13745"}


id: GO:0001408
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"}]},"cv_name":"biological_process","definition":"The directed movement of guanine nucleotides, GTP, GDP, and/or GMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"guanine nucleotide transport","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0001408","terms_by_termid":{"GO:1903790":null}}


id: PR:Q9UUB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu18 gene.","definition_xrefs":["UniProtKB:Q9UUB3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.11","synonyms":[{"name":"Spom972h-meu18","type":"exact"}],"termid":"PR:Q9UUB3"}


id: PBO:0088369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase","termid":"PBO:0088369"}


id: PBO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optineurin","termid":"PBO:0061906"}


id: PBO:0003649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog8 (predicted)","termid":"PBO:0003649"}


id: SO:0000492
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including D-heptamer, D-spacer and D-nonamer in 5' of D-region of a D-gene or D-sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_gene_recombination_feature","synonyms":[{"name":"D gene recombination feature","type":"exact"}],"termid":"SO:0000492"}


id: PBO:0057178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 329-2","termid":"PBO:0057178"}


id: GO:0046148
data:
  {"annotated_genes":["SJAG_03173","SJAG_03961","SJAG_01192","SJAG_01786","SJAG_05283","SJAG_00626","SJAG_04397","SJAG_00699","SJAG_02896","SJAG_01372","SJAG_01155","SJAG_01841","SJAG_04515","SJAG_03862","SJAG_02876","SJAG_04944","SJAG_04984","SJAG_04109","SJAG_00097"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78723,80413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[100605,105565,114263,98582,112262,74719,101454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[57244,64868,59216,60294,80283,63182,67811,63044],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[71779,77161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pigment anabolism","type":"exact"},{"name":"pigment biosynthesis","type":"exact"},{"name":"pigment formation","type":"exact"},{"name":"pigment synthesis","type":"exact"}],"termid":"GO:0046148","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: PBO:0003237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein Uvi15","termid":"PBO:0003237"}


id: PR:Q09759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.02c","synonyms":[{"name":"Spom972h-tim15","type":"exact"}],"termid":"PR:Q09759"}


id: GO:1901519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone B metabolic process","synonyms":[{"name":"aspyridone B metabolism","type":"exact"}],"termid":"GO:1901519"}


id: PATO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated","termid":"PATO:0001154"}


id: MONDO:0030438
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86584,86585],"is_not":false,"summary":null,"term":"MONDO:0030438"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112333","OMIM:619527","MEDGEN:1794197","UMLS:C5561987"],"synonyms":[{"name":"PCH16","type":"exact"}],"termid":"MONDO:0030438","terms_by_termid":{"MONDO:0030438":null},"xrefs":{"Monarch":{"xref_id":"0030438"}}}


id: GO:1904053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GOC:pad","GOC:PARL","PMID:22020285","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"positively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"activation of protein targeting to vacuole involved in autophagy","type":"narrow"},{"name":"up regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"up-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"upregulation of protein targeting to vacuole involved in autophagy","type":"exact"}],"termid":"GO:1904053"}


id: PBO:0084274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the biogenesis of ER-derived COPII transport vesicles; interacts with Yif1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; human homolog YIPF5 can complement yeast yip1 mutant","termid":"PBO:0084274"}


id: PBO:0038373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_route","termid":"PBO:0038373"}


id: MONDO:0010613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired metabolic disease that has its basis in the disruption of glycerol kinase activity.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn glycerol kinase deficiency","secondary_identifiers":["UMLS:C0268418","SCTID:124322002","Orphanet:308993","DOID:0060363","GARD:21311","MEDGEN:82803","OMIM:307030","NANDO:2200505"],"synonyms":[{"name":"GK deficiency","type":"related"},{"name":"GK1 deficiency","type":"related"},{"name":"GKD","type":"related"},{"name":"glycerol kinase deficiency","type":"exact"},{"name":"glycerol kinase deficiency, X-linked recessive","type":"exact"},{"name":"hyperglycerolemia","type":"related"},{"name":"inborn error of glycerol kinase activity","type":"exact"},{"name":"inborn glycerol kinase activity disorder","type":"exact"},{"name":"rare inborn error of glycerol kinase activity","type":"exact"}],"termid":"MONDO:0010613","xrefs":{"Monarch":{"xref_id":"0010613"}}}


id: PR:O59808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine aldehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.10","synonyms":[{"name":"BADH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atd3","type":"exact"},{"name":"meiotic expression up-regulated protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59808"}


id: FYPO:0008375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in the Golgi is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased phosphatidylinositol-4-phosphate level in the Golgi","termid":"FYPO:0008375"}


id: MONDO:1010671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any methemoglobinemia in cats in which the cause of the disease is a mutation in the CYB5R3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"methemoglobinemia, domestic cat","termid":"MONDO:1011559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methemoglobinemia, CYB5R3-related, domestic cat","secondary_identifiers":["OMIA:002131-9685"],"termid":"MONDO:1010671","xrefs":{"Monarch":{"xref_id":"1010671"}}}


id: PBO:0062769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily W member 1","termid":"PBO:0062769"}


id: MONDO:0010029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition in which there is complete right-to-left reversal of the position of the major thoracic and abdominal organs (that is, they are arranged in a mirror image of the normal positioning).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus","secondary_identifiers":["DOID:758","ICD10CM:Q89.3","MESH:D012857","HP:0001696","ICD9:759.89","Orphanet:101063","UMLS:C4551493","icd11.foundation:797648408","ICD9:759.3","MEDGEN:1642262","NCIT:C87121","SCTID:24614000","GARD:4883"],"synonyms":[{"name":"complete situs inversus","type":"exact"},{"name":"complete situs inversus viscerum","type":"exact"},{"name":"complete transposition (morphologic abnormality)","type":"exact"},{"name":"laterality sequence","type":"exact"},{"name":"situs ambiguus","type":"related"},{"name":"situs inversus","type":"exact"},{"name":"situs inversus totalis","type":"exact"},{"name":"situs inversus totalis (disease)","type":"exact"}],"termid":"MONDO:0010029","xrefs":{"Monarch":{"xref_id":"0010029"}}}


id: PBO:0047215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 223 member A","termid":"PBO:0047215"}


id: PBO:0081185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZHX1-C8orf76 readthrough","termid":"PBO:0081185"}


id: CHEBI:49976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc dichloride","termid":"CHEBI:49976"}


id: MONDO:0016510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epibulbar lipodermoid B preauricular appendages B polythelia is a branchial arch syndrome described in seven sibs of one Danish family and characterized by supernumerary nipples (polythelia), preauricular appendages and often binocular epibulbar lipodermoids or unilateral subconjunctival lipodermoids.","definition_xrefs":["Orphanet:231742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epibulbar lipodermoid-preauricular appendage-polythelia syndrome","secondary_identifiers":["UMLS:C5680927","GARD:20625","MEDGEN:1808551"],"termid":"MONDO:0016510","xrefs":{"Monarch":{"xref_id":"0016510"}}}


id: MONDO:0054551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial avascular necrosis of femoral head","termid":"MONDO:0012126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis of femoral head, primary, 2","secondary_identifiers":["MEDGEN:1386338","OMIM:617383","UMLS:C4479260"],"synonyms":[{"name":"ANFH2","type":"related"},{"name":"avascular necrosis of femoral head, primary, 2","type":"exact"}],"termid":"MONDO:0054551","xrefs":{"Monarch":{"xref_id":"0054551"}}}


id: MONDO:0009197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired pure red cell aplasia that is self-limited. It is the most common cause of decreased red blood cell production in the pediatric population, and typically presents as a normocytic anemia with reticulocytopenia in an otherwise asymptomatic and normal child with no evidence of other causes for anemia, including blood loss, hemolysis, nutritional deficiency, or malignancy.","definition_xrefs":["NCIT:C131683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary acquired red cell aplasia","termid":"MONDO:0020113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"transient erythroblastopenia of childhood","secondary_identifiers":["Orphanet:98871","GARD:7793","ICD9:284.81","SCTID:191255003","MEDGEN:68670","MESH:C536980","OMIM:227050","UMLS:C0238478"],"synonyms":[{"name":"erythroblastopenia, transient","type":"related"},{"name":"familial transient erythroblastopenia of childhood","type":"related"},{"name":"tec","type":"related"},{"name":"transient acquired pure red cell aplasia","type":"exact"},{"name":"transient erythroblastopenia of childhood","type":"exact"}],"termid":"MONDO:0009197","xrefs":{"Monarch":{"xref_id":"0009197"}}}


id: GO:0018572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,5-dichlorocatechol + O2 = 2 H+ + 2,4-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0276"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-dichlorocatechol 1,2-dioxygenase activity (obsolete GO:0018572)","termid":"GO:0018572"}


id: GO:0000814
data:
  {"annotated_genes":["SJAG_04936","SJAG_04912","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71391,72563,78816],"is_not":false,"summary":null,"term":"GO:0000814"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport and functions downstream of ESCRT I complex. It consists of the class E vacuolar protein sorting (Vps) proteins and is required for the membrane recruitment of ESCRT III complex and binds to ubiquitinated cargoes.","definition_xrefs":["GOC:rb","PMID:12892785","PMID:12900393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04024":null,"SJAG_04912":null,"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0032991","GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ESCRT II complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000814","terms_by_termid":{"GO:0000814":null}}


id: PBO:0074943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 108","termid":"PBO:0074943"}


id: GO:1903488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lactation.","definition_xrefs":["GOC:mr","PMID:19563620","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lactation","termid":"GO:1903487"},{"relation_name":"negatively_regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of lactation","synonyms":[{"name":"down regulation of lactation","type":"exact"},{"name":"down-regulation of lactation","type":"exact"},{"name":"downregulation of lactation","type":"exact"},{"name":"inhibition of lactation","type":"narrow"}],"termid":"GO:1903488"}


id: PBO:0052126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 4","termid":"PBO:0052126"}


id: MONDO:0019729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-amyloid monoclonal immunoglobulin deposition disease","termid":"MONDO:0019463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"light and heavy chain deposition disease","secondary_identifiers":["icd11.foundation:1815409370","NCIT:C158965","MEDGEN:1684811","Orphanet:93557","GARD:19223","UMLS:C5204117"],"synonyms":[{"name":"LHCDD","type":"exact"}],"termid":"MONDO:0019729","xrefs":{"Monarch":{"xref_id":"0019729"}}}


id: PBO:0041951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 2","termid":"PBO:0041951"}


id: GO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hypochlorous acid.","definition_xrefs":["PMID:176150","PMID:10085024","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"},{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hypochlorous acid metabolic process","synonyms":[{"name":"HClO metabolic process","type":"exact"},{"name":"HOCl metabolic process","type":"exact"},{"name":"hypochlorite metabolic process","type":"related"},{"name":"hypochlorous acid metabolism","type":"exact"}],"termid":"GO:0002148"}


id: MONDO:0007064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of SCID characterized by profound lymphopenia and very low immunoglobulin levels of all isotypes resulting in severe and recurrent opportunistic infections.","definition_xrefs":["Orphanet:277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254","MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency","secondary_identifiers":["OMIM:102700","CSP:1560-6660","NANDO:1200323","UMLS:C1863236","NANDO:2200696","MESH:C531816","SCTID:44940001","DOID:5810","NCIT:C3962","MedDRA:10066367","ICD9:277.2","GARD:5748","MEDGEN:354935"],"synonyms":[{"name":"ADA","type":"exact"},{"name":"ADA deficiency","type":"exact"},{"name":"ADA-SCID","type":"exact"},{"name":"SCID due to ADA deficiency","type":"exact"},{"name":"SCID due to ADA deficiency, delayed onset","type":"related"},{"name":"SCID due to ADA deficiency, early-onset","type":"exact"},{"name":"SCID due to ADA deficiency, late-onset","type":"related"},{"name":"SCID due to adenosine deaminase deficiency","type":"exact"},{"name":"adenosine deaminase deficiency","type":"exact"},{"name":"adenosine deaminase deficiency, partial","type":"related"},{"name":"adenosine deaminase deficiency, partial, Autosomal recessive, Somatic mosaicism","type":"exact"},{"name":"adenosine deaminase deficient severe combined immunodeficiency","type":"exact"},{"name":"partial ADA deficiency","type":"related"},{"name":"severe combined immunodeficiency due to ADA deficiency","type":"related"},{"name":"severe combined immunodeficiency due to ADA deficiency, Autosomal recessive, Somatic mosaicism","type":"exact"},{"name":"severe combined immunodeficiency due to adenosine deaminase deficiency","type":"related"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency","type":"exact"}],"termid":"MONDO:0007064","xrefs":{"Monarch":{"xref_id":"0007064"}}}


id: GO:0102463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-gentiobioside + UDP-L-rhamnose = quercetin 3-O-gentiobioside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-gentiobioside 7-O-rhamnosyltransferase activity (obsolete GO:0102463)","termid":"GO:0102463"}


id: PBO:0031596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_telophase","termid":"PBO:0031596"}


id: PBO:0081305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90","termid":"PBO:0081305"}


id: PR:Q09695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.02c","synonyms":[{"name":"Spom972h-psr1","type":"exact"}],"termid":"PR:Q09695"}


id: GO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell projection organization","synonyms":[{"name":"down regulation of cell projection organization","type":"exact"},{"name":"down-regulation of cell projection organization","type":"exact"},{"name":"downregulation of cell projection organization","type":"exact"},{"name":"inhibition of cell projection organization","type":"narrow"},{"name":"negative regulation of cell projection organisation","type":"exact"},{"name":"negative regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031345"}


id: SO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is unknown with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_uncertain_variant","synonyms":[{"name":"function uncertain variant","type":"exact"},{"name":"function_uncertain_variant","type":"exact"}],"termid":"SO:0002220"}


id: GO:0010192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage, a gelatinous substance secreted by plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage biosynthetic process","synonyms":[{"name":"mucilage anabolism","type":"exact"},{"name":"mucilage biosynthesis","type":"exact"},{"name":"mucilage formation","type":"exact"},{"name":"mucilage synthesis","type":"exact"}],"termid":"GO:0010192"}


id: PBO:0060482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 4","termid":"PBO:0060482"}


id: FYPO:0008005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell that is normal (i.e. indistinguishable from wild type) during stationary phase.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal reactive oxygen species level during stationary phase","synonyms":[{"name":"normal ROS accumulation during stationary phase","type":"related"},{"name":"normal ROS level during stationary phase","type":"exact"},{"name":"normal ROS level in stationary phase","type":"exact"},{"name":"normal reactive oxygen species accumulation during stationary phase","type":"related"},{"name":"normal reactive oxygen species level in stationary phase","type":"exact"}],"termid":"FYPO:0008005"}


id: PBO:0002239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-hemoprotein reductase (predicted)","termid":"PBO:0002239"}


id: GO:0036214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a contractile ring is positioned or maintained in a specific location.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile ring localization (obsolete GO:0036214)","termid":"GO:0036214"}


id: PBO:0079709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 3","termid":"PBO:0079709"}


id: GO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-727749","Reactome:R-HSA-9754929","Reactome:R-HSA-727740","Reactome:R-HSA-9755015","Reactome:R-HSA-9755035","Reactome:R-HSA-109534","Reactome:R-HSA-109536","Reactome:R-HSA-109527","Reactome:R-HSA-109529","Reactome:R-HSA-5628807","Reactome:R-HSA-727767","Reactome:R-HSA-9751024","Reactome:R-HSA-727768"],"synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"narrow"}],"termid":"GO:0005337"}


id: PBO:0000510
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.11","termid":"PBO:0000510"}


id: PBO:0034348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connected_to","termid":"PBO:0034348"}


id: PBO:0005143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L4 (predicted)","termid":"PBO:0005143"}


id: PBO:0117088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3R1 and CNRIP1 antisense RNA 1","termid":"PBO:0117088"}


id: PBO:0087110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal RNA processing element (RRPE)-binding protein; involved in the glucose-induced transition from quiescence to growth; restricted to nucleus in quiescent cells, released into cytoplasm after glucose repletion; binds Sin3p; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087110"}


id: PBO:0067314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 400, pseudogene","termid":"PBO:0067314"}


id: GO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during instar larval or pupal development, by which anatomical structures are generated and organized.","definition_xrefs":["GOC:mtg_sensu","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}


id: PBO:0042190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D2","termid":"PBO:0042190"}


id: PBO:0059638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 4","termid":"PBO:0059638"}


id: FYPO:0005124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from early meiotic genes measured in a cell is higher than normal. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:17927811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of early meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased RNA level of early meiotic genes during late meiosis","type":"exact"},{"name":"increased level of early meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased level of early meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased level of early meiotic gene mRNA during late meiotic nuclear division","type":"exact"},{"name":"increased level of early meiotic gene transcripts during late meiosis","type":"exact"}],"termid":"FYPO:0005124"}


id: GO:0010841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, or extent of the wakeful phase of the circadian sleep/wake cycle. The wakeful phase is the part of the circadian sleep/wake cycle where the organism is not asleep.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"},{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010841"}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88218,94191],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:dph","GOC:ai","GOC:clt","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: GO:0009005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of N-terminal leader sequences from membrane prolipoproteins. Hydrolyzes the terminal bond of Xaa-Xbb-Xbb-Cys, in which Xaa is hydrophobic (preferably Leu), Xbb is often Ser or Ala, Xcc is often Gly or Ala, and the Cys is alkylated on sulfur with a diacylglyceryl group.","definition_xrefs":["EC:3.4.23.36"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase II activity (obsolete GO:0009005)","synonyms":[{"name":"SPase II activity","type":"related"},{"name":"leader peptidase II","type":"related"},{"name":"lipoprotein signal peptidase activity","type":"related"},{"name":"premurein leader proteinase activity","type":"related"},{"name":"premurein-leader peptidase activity","type":"narrow"},{"name":"prolipoprotein signal peptidase activity","type":"related"},{"name":"prolipoprotein-signal peptidase activity","type":"related"},{"name":"signal peptidase II activity","type":"exact"}],"termid":"GO:0009005"}


id: GO:0015112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate ions (NO3-) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nitrate transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015112"}


id: PBO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 6","termid":"PBO:0061115"}


id: PBO:0003261
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of Wis1-Sty1 MAPKK-MAPK signaling pathway","termid":"PBO:0003261"}


id: GO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.","definition_xrefs":["GOC:sl","PMID:15211354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"pre-miRNA processing","synonyms":[{"name":"pre-microRNA processing","type":"exact"}],"termid":"GO:0031054"}


id: PBO:0090581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein Eis1","termid":"PBO:0090581"}


id: MONDO:0019762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 2 is a congenital respiratory tract anomaly characterized by a cleft extending below the vocal folds into the cricoid cartilage, with swallowing disorders and lung infections.","definition_xrefs":["Orphanet:93939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 2","secondary_identifiers":["UMLS:C0584824","GARD:19237","MEDGEN:667240"],"synonyms":[{"name":"LTEC II","type":"exact"},{"name":"LTEC2","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 2","type":"exact"}],"termid":"MONDO:0019762","xrefs":{"Monarch":{"xref_id":"0019762"}}}


id: PBO:0017836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc4","termid":"PBO:0017836"}


id: GO:0043984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K16 acetylation (obsolete GO:0043984)","synonyms":[{"name":"histone H4 acetylation at K16","type":"exact"}],"termid":"GO:0043984"}


id: PBO:0039994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 8B","termid":"PBO:0039994"}


id: PR:O13889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hri1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2-alpha kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.03c","synonyms":[{"name":"Spom972h-hri1","type":"exact"},{"name":"heme-regulated eukaryotic initiation factor eIF-2-alpha kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heme-regulated inhibitor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13889"}


id: MONDO:0021099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by the presence of multiple intraductal papillomas.","definition_xrefs":["NCIT:C7363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal papillomatosis","secondary_identifiers":["UMLS:C0334377","ICDO:8505/0","MEDGEN:90774"],"synonyms":[{"name":"duct papillomatosis","type":"exact"},{"name":"intraductal papillomatosis","type":"exact"}],"termid":"MONDO:0021099","xrefs":{"Monarch":{"xref_id":"0021099"}}}


id: PBO:0026954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_monoseptate_vegetative_cell","termid":"PBO:0026954"}


id: GO:1903904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of T cell polarity.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"is_a","term_name":"regulation of establishment of T cell polarity","termid":"GO:1903903"},{"relation_name":"negatively_regulates","term_name":"establishment of T cell polarity","termid":"GO:0001768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of T cell polarity","synonyms":[{"name":"down regulation of T cell polarization","type":"exact"},{"name":"down regulation of T lymphocyte polarization","type":"exact"},{"name":"down regulation of T-cell polarization","type":"exact"},{"name":"down regulation of establishment of T cell polarity","type":"exact"},{"name":"down regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"down regulation of establishment of T-cell polarity","type":"exact"},{"name":"down regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"down-regulation of T cell polarization","type":"exact"},{"name":"down-regulation of T lymphocyte polarization","type":"exact"},{"name":"down-regulation of T-cell polarization","type":"exact"},{"name":"down-regulation of establishment of T cell polarity","type":"exact"},{"name":"down-regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"down-regulation of establishment of T-cell polarity","type":"exact"},{"name":"down-regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"downregulation of T cell polarization","type":"exact"},{"name":"downregulation of T lymphocyte polarization","type":"exact"},{"name":"downregulation of T-cell polarization","type":"exact"},{"name":"downregulation of establishment of T cell polarity","type":"exact"},{"name":"downregulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"downregulation of establishment of T-cell polarity","type":"exact"},{"name":"downregulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"inhibition of T cell polarization","type":"narrow"},{"name":"inhibition of T lymphocyte polarization","type":"narrow"},{"name":"inhibition of T-cell polarization","type":"narrow"},{"name":"inhibition of establishment of T cell polarity","type":"narrow"},{"name":"inhibition of establishment of T lymphocyte polarity","type":"narrow"},{"name":"inhibition of establishment of T-cell polarity","type":"narrow"},{"name":"inhibition of establishment of T-lymphocyte polarity","type":"narrow"},{"name":"negative regulation of T cell polarization","type":"exact"},{"name":"negative regulation of T lymphocyte polarization","type":"exact"},{"name":"negative regulation of T-cell polarization","type":"exact"},{"name":"negative regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"negative regulation of establishment of T-cell polarity","type":"exact"},{"name":"negative regulation of establishment of T-lymphocyte polarity","type":"exact"}],"termid":"GO:1903904"}


id: MONDO:0013982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypohidrotic ectodermal dysplasia","termid":"MONDO:0015884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"ectodermal dysplasia 11A, hypohidrotic/hair/tooth type, autosomal dominant","secondary_identifiers":["GARD:18592","MEDGEN:762105","DOID:0111653","OMIM:614940","UMLS:C3541517"],"synonyms":[{"name":"ECTD11A","type":"related"},{"name":"ectodermal dysplasia 11A, hypohidrotic/hair/tooth type, autosomal dominant","type":"exact"},{"name":"ectodermal dysplasia, hypohidrotic, autosomal dominant","type":"related"}],"termid":"MONDO:0013982","xrefs":{"Monarch":{"xref_id":"0013982"}}}


id: PBO:0034648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_SUMO_chain_length","termid":"PBO:0034648"}


id: MONDO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the blood vessels.","definition_xrefs":["NCIT:C8538"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"cardiovascular cancer","termid":"MONDO:0002100"},{"relation_name":"is_a","term_name":"blood vessel neoplasm","termid":"MONDO:0021080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vascular cancer","secondary_identifiers":["UMLS:C1458139","MEDGEN:264315","DOID:175","MESH:D009383","Orphanet:673466"],"synonyms":[{"name":"Haemangiomatous tumor","type":"broad"},{"name":"Haemangiomatous tumour","type":"broad"},{"name":"blood vessel neoplasm","type":"broad"},{"name":"blood vessel tumor","type":"broad"},{"name":"blood vessel tumor (morphologic abnormality)","type":"broad"},{"name":"blood vessel tumor disorder","type":"broad"},{"name":"blood vessel tumors","type":"broad"},{"name":"blood vessel tumors (morphologic abnormality)","type":"broad"},{"name":"blood vessel tumour","type":"broad"},{"name":"blood vessel tumour (morphologic abnormality)","type":"broad"},{"name":"blood vessel tumour disorder","type":"broad"},{"name":"blood vessel tumours","type":"broad"},{"name":"blood vessel tumours (morphologic abnormality)","type":"broad"},{"name":"cancer of vasculature","type":"exact"},{"name":"leiomyosarcoma of the renal vein","type":"narrow"},{"name":"malignant blood vessel neoplasm","type":"exact"},{"name":"malignant blood vessel tumor","type":"exact"},{"name":"malignant blood vessel tumour","type":"exact"},{"name":"malignant great vessel tumour","type":"related"},{"name":"malignant neoplasm of vasculature","type":"exact"},{"name":"malignant tumor of pulmonary artery","type":"narrow"},{"name":"malignant tumor of pulmonary vein","type":"narrow"},{"name":"malignant tumour of pulmonary artery","type":"narrow"},{"name":"malignant tumour of pulmonary vein","type":"narrow"},{"name":"malignant vascular neoplasm","type":"exact"},{"name":"malignant vascular tumor","type":"exact"},{"name":"malignant vascular tumour","type":"exact"},{"name":"malignant vasculature neoplasm","type":"exact"},{"name":"neoplasm of great vessel","type":"broad"},{"name":"pulmonary artery cancer","type":"exact"},{"name":"pulmonary artery malignant neoplasm","type":"exact"},{"name":"pulmonary vein malignant neoplasm","type":"exact"},{"name":"renal vein leiomyosarcoma","type":"related"},{"name":"vascular tissue neoplasm","type":"related"},{"name":"vascular tumors","type":"broad"},{"name":"vascular tumours","type":"broad"},{"name":"vasculature cancer","type":"exact"}],"termid":"MONDO:0002095","xrefs":{"Monarch":{"xref_id":"0002095"}}}


id: GO:0140393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1'S)-averantin + NADP+ = norsolorinic acid + NADPH.","definition_xrefs":["PMID:8368836","PMID:10584035","RHEA:35447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketoreductase activity","termid":"GO:0045703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"norsolorinic acid ketoreductase activity","secondary_identifiers":["MetaCyc:RXN-9480","EC:1.1.1.349","KEGG_REACTION:R10309"],"termid":"GO:0140393"}


id: PBO:0080713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing antisense to TP53","termid":"PBO:0080713"}


id: MONDO:0015392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasal glial heterotopia is a rare developmental abnormality presenting usually at birth or in early childhood (rarely in adulthood) as a benign, non-pulsatile mass that can lead to nasal obstruction, deformation of the septum and nasal bone, and respiratory distress if untreated. Nasal glial heterotopias have no communication with the central nervous system; however an associated defect in the cribriform plate is sometimes reported.","definition_xrefs":["Orphanet:141112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal glial heterotopia","secondary_identifiers":["ICD9:748.1","SCTID:5645008","GARD:19949","MEDGEN:539951","icd11.foundation:1449384774","UMLS:C0266490"],"synonyms":[{"name":"nasal glioma","type":"exact"}],"termid":"MONDO:0015392","xrefs":{"Monarch":{"xref_id":"0015392"}}}


id: PBO:0039190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 1 pseudogene 1","termid":"PBO:0039190"}


id: FYPO:0006457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during meiosis I","termid":"FYPO:0006161"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to centromere central core during meiosis I","synonyms":[{"name":"abolished protein localisation to centromere central core during meiosis I","type":"exact"},{"name":"abolished protein localisation to chromatin at centromere central core during meiosis I","type":"exact"},{"name":"abolished protein localization to centromere central core during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to chromatin at centromere central core during meiosis I","type":"exact"},{"name":"protein localization to centromere central core abolished during meiosis I","type":"exact"},{"name":"protein localization to chromatin at centromere central core abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006457"}


id: GO:0120094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"},{"relation_name":"negatively_regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-lysine crotonylation","termid":"GO:0120094"}


id: PBO:0073025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase 1","termid":"PBO:0073025"}


id: PBO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP pseudouridylase box H/ACA snoRNP complex protein (predicted)","termid":"PBO:0001081"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: GO:0016807
data:
  {"annotated_genes":["SJAG_01481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75049],"is_not":false,"summary":null,"term":"GO:0016807"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"cysteine-type carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.4.18.-"],"termid":"GO:0016807","terms_by_termid":{"GO:0016807":null}}


id: PR:O74518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid12 gene.","definition_xrefs":["UniProtKB:O74518","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.12","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid12","type":"exact"},{"name":"caffeine-induced death protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74518"}


id: PBO:0004333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid protease (predicted)","termid":"PBO:0004333"}


id: GO:0071540
data:
  {"annotated_genes":["SJAG_02376","SJAG_03472","SJAG_04744","SJAG_03147","SJAG_02164","SJAG_04981","SJAG_02995","SJAG_02628"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68836,75471,95152,98088,98147,99286,105976,111081],"is_not":false,"summary":null,"term":"GO:0071540"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3e.","definition_xrefs":["PMID:15904532","PMID:19061185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3e","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eIF3e-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071540","terms_by_termid":{"GO:0071540":null}}


id: MONDO:0004607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a epiglottic vallecula.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oropharynx cancer","termid":"MONDO:0004608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"vallecula cancer","secondary_identifiers":["MEDGEN:509271","SCTID:363395000","ICD9:146.3","DOID:8556","UMLS:C0153386","ICD10CM:C10.0"],"synonyms":[{"name":"cancer of epiglottic vallecula","type":"exact"},{"name":"epiglottic vallecula cancer","type":"exact"},{"name":"malignant epiglottic vallecula neoplasm","type":"exact"},{"name":"malignant neoplasm of epiglottic vallecula","type":"exact"},{"name":"malignant tumor of vallecula","type":"exact"},{"name":"malignant tumour of vallecula","type":"exact"}],"termid":"MONDO:0004607","xrefs":{"Monarch":{"xref_id":"0004607"}}}


id: MOD:01584
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.199039 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}


id: GO:1990432
data:
  {"annotated_genes":["SJAG_01836","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71573,118491],"is_not":false,"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"The process of forming the mature 3' end of a siRNA molecule.","definition_xrefs":["PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_02621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"siRNA 3' end processing","type":"exact"},{"name":"small interfering RNA 3'-end processing","type":"exact"}],"termid":"GO:1990432","terms_by_termid":{"GO:1990432":null}}


id: PBO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 3","termid":"PBO:0044323"}


id: MONDO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A congenital defect in the muscles of the abdominal wall that results in the intestines and other abdominal organs developing outside the abdominal wall covered in a sac.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete umbilical hernia (obsolete MONDO:0000747)","secondary_identifiers":["MESH:D006554","NCIT:C118375","DOID:0060321","ICD9:756.72","SCTID:18735004","SCTID:396347007","ICD9:553.1","NCIT:C98997","HP:0001537"],"termid":"MONDO:0000747","xrefs":{"Monarch":{"xref_id":"0000747"}}}


id: MONDO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyposis","termid":"MONDO:0000147"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyposis, intestinal, scattered and discrete","secondary_identifiers":["OMIM:175400","MEDGEN:358114","UMLS:C1868006"],"synonyms":[{"name":"polyposis, intestinal, scattered and discrete","type":"exact"},{"name":"polyps, scattered, discrete intestinal","type":"related"}],"termid":"MONDO:0008281","xrefs":{"Monarch":{"xref_id":"0008281"}}}


id: PBO:0067509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 649, pseudogene","termid":"PBO:0067509"}


id: GO:2000615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 acetylation (obsolete GO:2000615)","synonyms":[{"name":"regulation of histone H3 acetylation at K9","type":"exact"},{"name":"regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000615"}


id: PBO:0061071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKD inhibitor of WNT signaling pathway 2","termid":"PBO:0061071"}


id: PBO:0040765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3","termid":"PBO:0040765"}


id: PATO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of having physical steadiness.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balance","termid":"PATO:0000185"}


id: GO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:15928678","GOC:add","PMID:10375559","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, endogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, endogenous lipid antigen","type":"exact"},{"name":"endogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048006"}


id: PBO:0113066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; associates with and protects nucleosome-free regions of the genome including rDNA, tDNA and telomeric loci, contributing to genome integrity","termid":"PBO:0113066"}


id: GO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to thrombospondin-1.","definition_xrefs":["PMID:11980922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-thrombospondin-1 complex","synonyms":[{"name":"ITGA4-ITGB1-THBS1 complex","type":"narrow"}],"termid":"GO:0071069"}


id: GO:0061375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillotectal tract over time, from its formation to the mature structure. The mammillotectal tract is the collection of axons that connects the ventral diencephalon to the superior colliculus.","definition_xrefs":["GOC:dph","GOC:yaf","PMID:10662642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary axonal complex development","termid":"GO:0061373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillotectal axonal tract development","termid":"GO:0061375"}


id: PBO:0029744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_calcium_import","termid":"PBO:0029744"}


id: PBO:0011466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase, tubulin-like (predicted)","termid":"PBO:0011466"}


id: GO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saponin metabolic process","termid":"GO:0016134"},{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin catabolic process","synonyms":[{"name":"saponin breakdown","type":"exact"},{"name":"saponin catabolism","type":"exact"},{"name":"saponin degradation","type":"exact"}],"termid":"GO:0016136"}


id: FYPO:0004084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during nitrogen starvation","synonyms":[{"name":"normal cellular protein level during nitrogen starvation","type":"exact"},{"name":"normal protein accumulation during nitrogen starvation","type":"related"},{"name":"normal protein level during nitrogen depletion","type":"exact"},{"name":"normal protein level during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004084"}


id: PR:O74548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylornithine aminotransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.09c","synonyms":[{"name":"ACOAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arg1","type":"exact"}],"termid":"PR:O74548"}


id: MONDO:0020751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthostatic hypotension 2","secondary_identifiers":["MEDGEN:1648282","OMIM:618182","UMLS:C4748569"],"termid":"MONDO:0020751","xrefs":{"Monarch":{"xref_id":"0020751"}}}


id: PBO:0039650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit mu 1","termid":"PBO:0039650"}


id: GO:2001277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"negatively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-leucine biosynthetic process","synonyms":[{"name":"negative regulation of L-leucine anabolism","type":"exact"},{"name":"negative regulation of L-leucine biosynthesis","type":"exact"},{"name":"negative regulation of L-leucine formation","type":"exact"},{"name":"negative regulation of L-leucine synthesis","type":"exact"},{"name":"negative regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001277"}


id: MONDO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, follicular","secondary_identifiers":["GARD:2355","SCTID:238627002","NANDO:1200628","MEDGEN:98025","UMLS:C0406344"],"synonyms":[{"name":"follicular ichthyosis","type":"exact"}],"termid":"MONDO:0043094","xrefs":{"Monarch":{"xref_id":"0043094"}}}


id: PBO:0088361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Utp23","termid":"PBO:0088361"}


id: GO:1903141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of endothelial barrier.","definition_xrefs":["PMID:24851274","GOC:TermGenie","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell development","termid":"GO:1901551"},{"relation_name":"is_a","term_name":"regulation of establishment of endothelial barrier","termid":"GO:1903140"},{"relation_name":"negatively_regulates","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of endothelial barrier","synonyms":[{"name":"down regulation of establishment of endothelial barrier","type":"exact"},{"name":"down-regulation of establishment of endothelial barrier","type":"exact"},{"name":"downregulation of establishment of endothelial barrier","type":"exact"},{"name":"inhibition of establishment of endothelial barrier","type":"narrow"}],"termid":"GO:1903141"}


id: MONDO:0018387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to adrenal disorder (obsolete MONDO:0018387)","secondary_identifiers":["Orphanet:399584"],"termid":"MONDO:0018387","xrefs":{"Monarch":{"xref_id":"0018387"}}}


id: GO:0038008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intracellular process in which a signal is passed on to downstream components within the cell via a tumor necrosis factor receptor-associated factor (TRAF). TRAFs are directly or indirectly recruited to the intracellular domains of cell surface receptors, and engage other signaling proteins to transfer the signal from a cell surface receptor to other intracellular signaling components.","definition_xrefs":["PMID:20596822","GOC:bf","PMID:19918944"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAF-mediated signal transduction (obsolete GO:0038008)","synonyms":[{"name":"TRAF signaling","type":"exact"},{"name":"TRAF-mediated intracellular signaling","type":"exact"},{"name":"TRAF-mediated signaling","type":"exact"},{"name":"TRAF-mediated signalling","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signal transduction","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signaling","type":"exact"}],"termid":"GO:0038008"}


id: GO:0034412
data:
  {"annotated_genes":["SJAG_03587","SJAG_04771","SJAG_04666","SJAG_04483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73452],"is_not":false,"summary":null,"term":"GO:0034412"},{"annotations":[94825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[87869,92781],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030437","GO:0008150","GO:0044085","GO:0007049","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-glucan formation","type":"exact"},{"name":"ascospore wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0034412","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: PBO:0082553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central kinetochore protein and subunit of the Ctf19 complex; mutants have elevated rates of chromosome loss; orthologous to fission yeast kinetochore protein fta4","termid":"PBO:0082553"}


id: FYPO:0000433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased fermentation","synonyms":[{"name":"fermentative metabolism: increased","type":"related"},{"name":"increased fermentation during mitotic cell cycle","type":"related"},{"name":"increased fermentation during vegetative growth","type":"exact"},{"name":"increased fermentative metabolism","type":"exact"}],"termid":"FYPO:0000433"}


id: MONDO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophy of tongue papillae","secondary_identifiers":["SCTID:6971002","MEDGEN:581137","DOID:13333","UMLS:C0392494","ICD10CM:K14.3","ICD9:529.3","icd11.foundation:1189946017"],"synonyms":[{"name":"tongue papillary hypertrophy","type":"exact"}],"termid":"MONDO:0001689","xrefs":{"Monarch":{"xref_id":"0001689"}}}


id: PBO:0057692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1282","termid":"PBO:0057692"}


id: PBO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-S ortholog, FANCM-MHF complex subunit Mhf1","termid":"PBO:0018014"}


id: MONDO:0019878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q26 microduplication syndrome is a rare chromosomal anomaly characterized by prenatal and postnatal growth retardation, developmental delay, intellectual impairment, dysmorphic signs and variable combination of congenital anomalies, including cardiovascular, genitourinary and skeletal anomalies and spectrum of caudal malformations.","definition_xrefs":["Orphanet:96095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 3","termid":"MONDO:0016954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3q26 microduplication syndrome","secondary_identifiers":["GARD:19311","MEDGEN:1670584","UMLS:C4755319"],"synonyms":[{"name":"Cornelia de Lange-like syndrome","type":"exact"},{"name":"dup(3)(q26)","type":"exact"},{"name":"dup(3q) syndrome","type":"exact"},{"name":"trisomy 3q26","type":"exact"}],"termid":"MONDO:0019878","xrefs":{"Monarch":{"xref_id":"0019878"}}}


id: GO:0097512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cardiac myofibril is a myofibril specific to cardiac muscle cells.","definition_xrefs":["GOC:cjm","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cardiac myofibril","termid":"GO:0097512"}


id: GO:0032398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class Ib alpha chain and, in most cases, an invariant beta2-microglobin chain, and with or without a bound peptide or lipid antigen. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["PMID:15928678","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"MHC class Ib protein complex","termid":"GO:0032398"}


id: MOD:01731
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01731"}


id: GO:0043409
data:
  {"annotated_genes":["SJAG_04522","SJAG_04825","SJAG_01114","SJAG_05000","SJAG_03263","SJAG_02013","SJAG_03185","SJAG_02233","SJAG_00975","SJAG_03893","SJAG_02000","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88557],"is_not":false,"summary":null,"term":"GO:0043409"},{"annotations":[107985,118710,107419,96210,99798,104165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[92022,96330,99800,118711,95400,117471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[107508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01114":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of MAPK cascade","type":"exact"},{"name":"down regulation of MAPKKK cascade","type":"exact"},{"name":"down-regulation of MAPK cascade","type":"exact"},{"name":"down-regulation of MAPKKK cascade","type":"exact"},{"name":"downregulation of MAPK cascade","type":"exact"},{"name":"downregulation of MAPKKK cascade","type":"exact"},{"name":"inhibition of MAPK cascade","type":"narrow"},{"name":"inhibition of MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAP kinase cascade","type":"exact"},{"name":"negative regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of MAPKKK cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043409","terms_by_termid":{"GO:0043409":null,"GO:0180040":null,"GO:1903138":null,"GO:1903753":null}}


id: PR:Q10482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysosomal amino acid transporter 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.10","secondary_identifiers":["UniProtKB:Q10482"],"synonyms":[{"name":"Spom972h-PQLC2","type":"exact"}],"termid":"PR:Q10482"}


id: PBO:0003537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. pombe ura5 mutant","termid":"PBO:0003537"}


id: PR:Q9UTJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein cgr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.05c","synonyms":[{"name":"Spom972h-cgr1","type":"exact"}],"termid":"PR:Q9UTJ4"}


id: PBO:0083348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene ECM38","termid":"PBO:0083348"}


id: MONDO:0012807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized severe blistering with widespread congenital absence of skin and pyloric atresia.","definition_xrefs":["Orphanet:158684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 5C, with pyloric atresia","secondary_identifiers":["MESH:C567408","GARD:16991","MEDGEN:436922","SCTID:716701004","UMLS:C2677349","OMIM:612138"],"synonyms":[{"name":"EBS with pyloric atresia","type":"related"},{"name":"EBS-PA","type":"exact"},{"name":"EBSPA","type":"related"},{"name":"epidermolysis bullosa simplex 5C, with pyloric atresia","type":"exact"},{"name":"epidermolysis bullosa simplex with pyloric atresia","type":"exact"}],"termid":"MONDO:0012807","xrefs":{"Monarch":{"xref_id":"0012807"}}}


id: GO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated cytotoxicity","termid":"GO:0070948"},{"relation_name":"negatively_regulates","term_name":"neutrophil mediated cytotoxicity","termid":"GO:0070942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated cytotoxicity","synonyms":[{"name":"down regulation of neutrophil mediated cytotoxicity","type":"exact"},{"name":"down-regulation of neutrophil mediated cytotoxicity","type":"exact"},{"name":"downregulation of neutrophil mediated cytotoxicity","type":"exact"},{"name":"inhibition of neutrophil mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070954"}


id: MONDO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the ascending colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"ascending colon cancer","secondary_identifiers":["UMLS:C0153439","DOID:218","SCTID:363412000","ICD9:153.6","MEDGEN:509293"],"synonyms":[{"name":"Ca ascending colon","type":"exact"},{"name":"ascending colon cancer","type":"exact"},{"name":"cancer of ascending colon","type":"exact"},{"name":"malignant ascending colon neoplasm","type":"exact"},{"name":"malignant neoplasm of ascending colon","type":"exact"},{"name":"malignant neoplasm of right colon","type":"exact"},{"name":"malignant tumor of ascending colon","type":"exact"},{"name":"malignant tumour of ascending colon","type":"exact"}],"termid":"MONDO:0002238","xrefs":{"Monarch":{"xref_id":"0002238"}}}


id: MOD:01544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01544"}


id: PBO:0061135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 1 pseudogene 1","termid":"PBO:0061135"}


id: PBO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helix-Extension-Helix domain protein","termid":"PBO:0001431"}


id: GO:2001211
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111760,115872],"is_not":false,"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:2001210"},{"relation_name":"negatively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006629","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of Ac-MVA pathway","type":"exact"},{"name":"negative regulation of acetate-mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:2001211","terms_by_termid":{"GO:2001211":null}}


id: GO:0018787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + H2O = 4-hydroxybenzoyl-CoA + chloride + H+.","definition_xrefs":["RHEA:14853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"4-chlorobenzoyl-CoA dehalogenase activity","secondary_identifiers":["MetaCyc:3.8.1.7-RXN","UM-BBD_enzymeID:r0140","EC:3.8.1.7"],"synonyms":[{"name":"4-chlorobenzoyl CoA chlorohydrolase activity","type":"related"}],"termid":"GO:0018787"}


id: FYECO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in a medium containing zinc sulfate","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zinc sulfate","synonyms":[{"name":"+ zinc sulphate","type":"exact"}],"termid":"FYECO:0000404"}


id: PBO:0034275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_preceded_by","termid":"PBO:0034275"}


id: MOD:01494
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["OMSSA:171","Unimod:533#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ115","type":"related"},{"name":"iTRAQ115K","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01494"}


id: PBO:0064685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 21","termid":"PBO:0064685"}


id: GO:1905113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["GO_REF:0000058","PMID:22375062","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905113)","synonyms":[{"name":"activation of centromere clustering at the nuclear envelope","type":"narrow"},{"name":"activation of centromere clustering at the nuclear periphery","type":"narrow"},{"name":"activation of centromere-SPB clustering","type":"related"},{"name":"activation of kinetochore clustering at SPB","type":"related"},{"name":"activation of kinetochore clustering at spindle pole body","type":"related"},{"name":"activation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"activation of kinetochore localization at spindle pole body","type":"related"},{"name":"activation of rabl configuration","type":"related"},{"name":"positive regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"positive regulation of centromere-SPB clustering","type":"related"},{"name":"positive regulation of kinetochore clustering at SPB","type":"related"},{"name":"positive regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"positive regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"positive regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"positive regulation of rabl configuration","type":"related"},{"name":"up regulation of centromere clustering at the nuclear envelope","type":"exact"},{"name":"up regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"up regulation of centromere-SPB clustering","type":"related"},{"name":"up regulation of kinetochore clustering at SPB","type":"related"},{"name":"up regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"up regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"up regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"up regulation of rabl configuration","type":"related"},{"name":"up-regulation of centromere clustering at the nuclear envelope","type":"exact"},{"name":"up-regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"up-regulation of centromere-SPB clustering","type":"related"},{"name":"up-regulation of kinetochore clustering at SPB","type":"related"},{"name":"up-regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"up-regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"up-regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"up-regulation of rabl configuration","type":"related"},{"name":"upregulation of centromere clustering at the nuclear envelope","type":"exact"},{"name":"upregulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"upregulation of centromere-SPB clustering","type":"related"},{"name":"upregulation of kinetochore clustering at SPB","type":"related"},{"name":"upregulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"upregulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"upregulation of kinetochore localization at spindle pole body","type":"related"},{"name":"upregulation of rabl configuration","type":"related"}],"termid":"GO:1905113"}


id: MONDO:0014437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS9-related ciliopathy","termid":"MONDO:0700236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 9","secondary_identifiers":["GARD:10208","MESH:C565918","MEDGEN:347182","UMLS:C1859567","DOID:0110131","OMIM:615986"],"synonyms":[{"name":"BBS9","type":"exact"},{"name":"BBS9 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 9","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS9","type":"exact"},{"name":"Bardet-Biedl syndrome type 9","type":"exact"}],"termid":"MONDO:0014437","xrefs":{"Monarch":{"xref_id":"0014437"}}}


id: MOD:00430
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups.","definition_xrefs":["PubMed:7093227","PubMed:6778808","PubMed:8453381","PubMed:4304194","PubMed:12590383","PubMed:3145979","Unimod:37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated residue","synonyms":[{"name":"Me3Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00430"}


id: PR:O13809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.12c gene.","definition_xrefs":["UniProtKB:O13809","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C17H9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.12c","synonyms":[{"name":"Spom972h-SPAC17H9.12c","type":"exact"}],"termid":"PR:O13809"}


id: GO:2000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of male gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of male gonad development","termid":"GO:2000018"},{"relation_name":"positively_regulates","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male gonad development","synonyms":[{"name":"positive regulation of testicular development","type":"exact"},{"name":"positive regulation of testis development","type":"exact"}],"termid":"GO:2000020"}


id: GO:0097322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 7SK small nuclear RNA (7SK snRNA).","definition_xrefs":["PMID:21853533","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"7SK snRNA binding","synonyms":[{"name":"7SK small nuclear RNA binding","type":"exact"}],"termid":"GO:0097322"}


id: MONDO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus carcinoma that occurs during childhood.","definition_xrefs":["NCIT:C124292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"choroid plexus carcinoma","termid":"MONDO:0016718"},{"relation_name":"is_a","term_name":"childhood choroid plexus neoplasm","termid":"MONDO:0024744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood choroid plexus carcinoma","secondary_identifiers":["MEDGEN:901899","DOID:3545","UMLS:C1510426"],"synonyms":[{"name":"childhood choroid plexus cancer","type":"related"},{"name":"childhood choroid plexus carcinoma","type":"exact"},{"name":"childhood choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus carcinoma of childhood","type":"exact"},{"name":"paediatric choroid plexus carcinoma","type":"exact"},{"name":"pediatric choroid plexus carcinoma","type":"exact"}],"termid":"MONDO:0002685","xrefs":{"Monarch":{"xref_id":"0002685"}}}


id: MONDO:0004801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral hypoactive labyrinth","secondary_identifiers":["MEDGEN:510003","UMLS:C0155517","DOID:9496","ICD9:386.53"],"termid":"MONDO:0004801","xrefs":{"Monarch":{"xref_id":"0004801"}}}


id: MONDO:0019995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral resistance to thyroid hormones may be a cause of permanent congenital hypothyroidism, a permanent thyroid hormone deficiency that is present from birth.","definition_xrefs":["Orphanet:97927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral hypothyroidism","termid":"MONDO:0016412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral resistance to thyroid hormones","secondary_identifiers":["GARD:12734","SCTID:718193005","UMLS:C4273673","MEDGEN:902322"],"termid":"MONDO:0019995","xrefs":{"Monarch":{"xref_id":"0019995"}}}


id: FYPO:0006980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Glc3Man9GlcNAc measured in a cell is higher than normal. Glc3Man9GlcNAc2 is an N-glycan that is involved in post-translational modification of proteins, and consists of a branched ten-membered mannooligosaccharide containing three D-glucose residues, nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PomBase:mah","CHEBI:53019","PMID:30389790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"},{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased Glc3Man9GlcNAc level","synonyms":[{"name":"increased G3M9 glycan accumulation","type":"related"},{"name":"increased G3M9 glycan level","type":"exact"},{"name":"increased Glc3Man9GlcNAc accumulation","type":"related"},{"name":"increased Glc3Man9GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Glc3Man9GlcNAc level during vegetative growth","type":"exact"}],"termid":"FYPO:0006980"}


id: MONDO:0021020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crigler-Najjar syndrome type 1 (CNS1) is the most severe form of CNS, a hereditary disorder of hepatic bilirubin conjugation, characterized by severe neonatal unconjugated hyperbilirubinemia due to a complete absence of hepatic bilirubin glucuronosyltransferase (BGT).","definition_xrefs":["Orphanet:79234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crigler-Najjar syndrome","termid":"MONDO:0009044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Crigler-Najjar syndrome type 1","secondary_identifiers":["SCTID:8933000","icd11.foundation:1098453659","UMLS:C0010324","MedDRA:10057034","MEDGEN:41346","GARD:47","OMIM:218800"],"synonyms":[{"name":"Crigler Najjar syndrome, type 1","type":"related"},{"name":"Crigler-Najjar syndrome, type 1","type":"exact"},{"name":"Crigler-Najjar syndrome, type I","type":"exact"},{"name":"UGT deficiency type 1","type":"exact"},{"name":"bilirubin uridinediphosphate glucuronosyltransferase deficiency type 1","type":"exact"},{"name":"bilirubin-UGT deficiency type 1","type":"exact"},{"name":"hereditary unconjugated hyperbilirubinemia type 1","type":"exact"},{"name":"hyperbilirubinemia, Crigler-Najjar type 1","type":"exact"}],"termid":"MONDO:0021020","xrefs":{"Monarch":{"xref_id":"0021020"}}}


id: PBO:0051021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 1","termid":"PBO:0051021"}


id: GO:0019548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"arginine catabolic process to spermine","secondary_identifiers":["MetaCyc:ARGSPECAT-PWY"],"synonyms":[{"name":"arginine breakdown to spermine","type":"exact"},{"name":"arginine degradation to spermine","type":"exact"}],"termid":"GO:0019548"}


id: FYPO:0001215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a protein complex at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein complex assembly during vegetative growth","synonyms":[{"name":"normal cellular protein complex assembly during vegetative growth","type":"exact"},{"name":"normal protein complex assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001215"}


id: GO:0061312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart development (obsolete GO:0061312)","synonyms":[{"name":"BMP signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061312"}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: MONDO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deeah syndrome","secondary_identifiers":["OMIM:619004","MEDGEN:1756624","UMLS:C5436579"],"synonyms":[{"name":"DEEAH","type":"related"},{"name":"DEEAH SYNDROME","type":"related"},{"name":"Developmental Delay With Endocrine, Exocrine, Autonomic, and Hematologic Abnormalities","type":"related"}],"termid":"MONDO:0033561","xrefs":{"Monarch":{"xref_id":"0033561"}}}


id: MONDO:0007651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gastrocutaneous syndrome","secondary_identifiers":["OMIM:137270","Orphanet:2069","icd11.foundation:1431211717","GARD:2438","MESH:C535651","UMLS:C1850899","MEDGEN:338154"],"synonyms":[{"name":"gastrocutaneous syndrome","type":"exact"},{"name":"peptic Ulcer/hiatal hernia, multiple lentigines/cafe-Au-lait Spots, hypertelorism, myopia","type":"related"}],"termid":"MONDO:0007651","xrefs":{"Monarch":{"xref_id":"0007651"}}}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR12542:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: GO:0140215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"}


id: MOD:00349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form 4-amino-3-isothiazolidinone-L-serine.","definition_xrefs":["PubMed:12802338","PubMed:12802339","RESID:AA0344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-serine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-hydroxypropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-hydroxy-propanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-serine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)serine (Cys-Ser)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-serine","type":"exact"},{"name":"serine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"serine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:00349"}


id: FYPO:0003336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the actomyosin contractile ring for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to cell division site","termid":"FYPO:0002527"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of protein localization to actomyosin contractile ring","synonyms":[{"name":"increased duration of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased duration of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to contractile ring","type":"exact"},{"name":"increased duration of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased duration of protein localization to mitotic contractile ring","type":"exact"},{"name":"increased duration of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"prolonged protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0003336"}


id: GO:0033240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"positively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine metabolic process","synonyms":[{"name":"positive regulation of amine metabolism","type":"exact"},{"name":"positive regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033240"}


id: PBO:0119633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 14","termid":"PBO:0119633"}


id: GO:0021652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 1. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:curators","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 formation","termid":"GO:0021652"}


id: PBO:0036096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036096"}


id: FYPO:0005860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell contains a detectable Mei2 nuclear dot complex during the vegetative growth phase of the life cycle. Normally the Mei2 nuclear dot is only present during the meiotic cell cycle.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"Mei2 nuclear dot present in cell during vegetative growth","synonyms":[{"name":"Mei2 nuclear dot present in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005860"}


id: PATO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape with three supports or legs.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripodal","termid":"PATO:0002428"}


id: GO:0098622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + selenodiglutathione + NADPH = gluthathioselenol + glutathione + NADP+.","definition_xrefs":["PMID:1569062","RHEA:34927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491","GO:0015036"],"is_obsolete":false,"name":"selenodiglutathione-disulfide reductase (NADPH) activity","secondary_identifiers":["Reactome:R-HSA-2408542"],"synonyms":[{"name":"selenodiglutathione-disulfide reductase (NADP) activity","type":"exact"},{"name":"selenodiglutathione-disulfide reductase activity","type":"broad"}],"termid":"GO:0098622"}


id: PBO:0038428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,3-galactosyltransferase 2","termid":"PBO:0038428"}


id: MONDO:0007240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant inherited cardiac bundle branch disorder which can progress to complete heart block.","definition_xrefs":["NCIT:C126651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conduction system disorder","termid":"MONDO:0005449"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"},{"relation_name":"is_a","term_name":"progressive familial heart block","termid":"MONDO:0019490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block, type 1A","secondary_identifiers":["MESH:D002037","MEDGEN:406301","DOID:0111074","UMLS:C1879286","GARD:1093","OMIM:113900"],"synonyms":[{"name":"Cardiac conduction defect, nonprogressive","type":"related"},{"name":"Cardiac conduction defect, progressive","type":"related"},{"name":"Lenegre disease","type":"related"},{"name":"Lenegre's disease","type":"exact"},{"name":"Lenegre's syndrome","type":"related"},{"name":"Lenegre-Lev disease","type":"related"},{"name":"Lev disease","type":"related"},{"name":"PFHB1A","type":"exact"},{"name":"SCN5A progressive familial heart block","type":"exact"},{"name":"heart block progressive familial type 1","type":"related"},{"name":"heart block, nonprogressive","type":"related"},{"name":"heart block, progressive familial, type 1","type":"related"},{"name":"heart block, progressive, type IA","type":"exact"},{"name":"hereditary bundle branch system defect","type":"related"},{"name":"progressive familial heart block caused by mutation in SCN5A","type":"exact"},{"name":"progressive familial heart block type 1A","type":"related"},{"name":"progressive familial heart block type IA","type":"related"},{"name":"progressive familial heart block, type IA","type":"exact"}],"termid":"MONDO:0007240","xrefs":{"Monarch":{"xref_id":"0007240"}}}


id: MONDO:0017177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic overgrowth syndrome characterized by non- progressive, asymmetrical, moderate hemihyperplasia (frequently affecting the limbs) associated with slow growing, painless, multiple, recurrent, subcutaneous lipomatous masses distributed throughout entire body (in particular back, torso, extremities, fingers, axillae). Superficial vascular malformations may also be associated. Increased risk of intra-abdominal embryonal malignancies may be associated.","definition_xrefs":["Orphanet:276280"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0018719)","termid":"MONDO:0018719"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemihyperplasia-multiple lipomatosis syndrome","secondary_identifiers":["GARD:21051","UMLS:C4749904","MEDGEN:1651269"],"synonyms":[{"name":"HHML","type":"exact"}],"termid":"MONDO:0017177","xrefs":{"Monarch":{"xref_id":"0017177"}}}


id: PBO:0040572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 6","termid":"PBO:0040572"}


id: PBO:0077111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17B pseudogene 1","termid":"PBO:0077111"}


id: PBO:0081862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF793 antisense RNA 1 (head to head)","termid":"PBO:0081862"}


id: PBO:0030709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_replication_origin_binding","termid":"PBO:0030709"}


id: GO:0071696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal placode development","termid":"GO:0071696"}


id: MONDO:1012390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory ataxic neuropathy, non-human animal","termid":"MONDO:1011878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, dog","secondary_identifiers":["OMIA:001467-9615"],"termid":"MONDO:1012390","xrefs":{"Monarch":{"xref_id":"1012390"}}}


id: PBO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT (predicted)","termid":"PBO:0000400"}


id: PBO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA(Gln) amidotransferase complex subunit Gtf1 (predicted)","termid":"PBO:0017087"}


id: MONDO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Zika fever (obsolete MONDO:0000768)","termid":"MONDO:0000768","xrefs":{"Monarch":{"xref_id":"0000768"}}}


id: PBO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 4","termid":"PBO:0048885"}


id: PBO:0069568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 840, pseudogene","termid":"PBO:0069568"}


id: PBO:0030322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_palmitoyl-CoA_ligase_activity","termid":"PBO:0030322"}


id: PBO:0051616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 1","termid":"PBO:0051616"}


id: PBO:0090642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp15","termid":"PBO:0090642"}


id: PATO:0001164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of the bearer's exhibiting density.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dense","termid":"PATO:0001164"}


id: GO:0032479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type I interferon production","secondary_identifiers":["Reactome:R-HSA-3134975"],"synonyms":[{"name":"regulation of type I IFN production","type":"exact"}],"termid":"GO:0032479"}


id: PBO:0061694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 pseudogene 2","termid":"PBO:0061694"}


id: FYPO:0003937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cell population growth is increased relative to normal. Increased growth may reflect an increased growth rate (i.e. faster growth), growth that occurs to a greater extent than normal, or both. Cell population growth refers to an increase in the number of cells in the population as individual cells grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"},{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002057","FYPO:0001985","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth","synonyms":[{"name":"fast aerobic cell population growth","type":"narrow"},{"name":"increased aerobic cell population growth","type":"narrow"},{"name":"increased growth","type":"broad"}],"termid":"FYPO:0003937"}


id: PBO:0091675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional lncRNA of nc-tgp1, non-functional","termid":"PBO:0091675"}


id: RO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_formation_of","termid":"_global:results_in_formation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_synthesis_of","termid":"RO:0002587"}


id: GO:0051205
data:
  {"annotated_genes":["SJAG_03633","SJAG_00277","SJAG_01496","SJAG_01940","SJAG_03315","SJAG_01223","SJAG_02065","SJAG_00064","SJAG_01178","SJAG_01240","SJAG_05414","SJAG_02330","SJAG_03865","SJAG_02208","SJAG_01917","SJAG_03930","SJAG_02437","SJAG_01127","SJAG_01405","SJAG_05302","SJAG_01999","SJAG_04684","SJAG_00603","SJAG_04294","SJAG_02914","SJAG_00959","SJAG_01782","SJAG_05300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104848,108779,98718,95197,92026,106545,112643,114226,68309,108691,98950,109718,98408,114780,101554,103877,110786,105154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[74808,78912,58362,78863,78653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[88273,114518,115485,75419,73218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a biological membrane. Incorporation in this context means having some part or covalently attached group that is inserted into the the hydrophobic region of one or both bilayers.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"part_of","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01127":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01405":null,"SJAG_01496":null,"SJAG_01782":null,"SJAG_01917":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_03315":null,"SJAG_03633":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04294":null,"SJAG_04684":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein insertion into membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"integral membrane protein localization","type":"exact"},{"name":"integral membrane protein positioning","type":"exact"},{"name":"membrane protein localization","type":"exact"},{"name":"membrane protein positioning","type":"exact"},{"name":"protein-membrane insertion","type":"exact"}],"termid":"GO:0051205","terms_by_termid":{"GO:0032979":null,"GO:0045048":null,"GO:0071816":null}}


id: GO:0047301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-methyl-2-oxopentanoate + L-valine = 3-methyl-2-oxobutanoate + L-isoleucine.","definition_xrefs":["RHEA:11468","EC:2.6.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"valine-3-methyl-2-oxovalerate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02200","MetaCyc:2.6.1.32-RXN"],"synonyms":[{"name":"L-valine:(S)-3-methyl-2-oxopentanoate aminotransferase activity","type":"related"},{"name":"valine--3-methyl-2-oxovalerate aminotransferase activity","type":"related"},{"name":"valine--isoleucine aminotransferase activity","type":"related"},{"name":"valine--isoleucine transaminase activity","type":"related"},{"name":"valine-2-keto-methylvalerate aminotransferase activity","type":"related"},{"name":"valine-3-methyl-2-oxovalerate aminotransferase activity","type":"exact"}],"termid":"GO:0047301"}


id: PBO:0049571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 8","termid":"PBO:0049571"}


id: MONDO:1012714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in dogs with a XY karyotype.","definition_xrefs":["OMIA:001601-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, dog","termid":"MONDO:1012714","xrefs":{"Monarch":{"xref_id":"1012714"}}}


id: MONDO:0011425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in variation in the chromosome region 2q14-q22.","definition_xrefs":["DOID:0110429","PMID:10486326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1H","secondary_identifiers":["GARD:15365","MESH:C536277","OMIM:604288","MEDGEN:348980","UMLS:C1858591"],"synonyms":[{"name":"CMD1H","type":"exact"},{"name":"cardiomyopathy, dilated, 1H","type":"related"},{"name":"cardiomyopathy, dilated, with conduction defect","type":"related"},{"name":"dilated cardiomyopathy type 1H","type":"exact"},{"name":"dilated cardiomyopathy with conduction defect","type":"exact"}],"termid":"MONDO:0011425","xrefs":{"Monarch":{"xref_id":"0011425"}}}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: GO:0048705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dsf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system morphogenesis","synonyms":[{"name":"skeletal morphogenesis","type":"exact"}],"termid":"GO:0048705"}


id: PBO:0041747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 divergent transcript","termid":"PBO:0041747"}


id: PBO:0080595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 25","termid":"PBO:0080595"}


id: GO:0045581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"negatively_regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell differentiation","synonyms":[{"name":"down regulation of T cell differentiation","type":"exact"},{"name":"down-regulation of T cell differentiation","type":"exact"},{"name":"downregulation of T cell differentiation","type":"exact"},{"name":"inhibition of T cell differentiation","type":"narrow"},{"name":"negative regulation of T cell development","type":"related"},{"name":"negative regulation of T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of T-cell differentiation","type":"exact"},{"name":"negative regulation of T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045581"}


id: PBO:0061781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 2","termid":"PBO:0061781"}


id: MONDO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the penis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous carcinoma in situ","termid":"MONDO:0004693"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"penis carcinoma in situ","secondary_identifiers":["SCTID:398831006","UMLS:C0154089","DOID:8872","NCIT:C27790","ICD9:233.5","ICDO:8080/2","MEDGEN:102309","SCTID:398768004"],"synonyms":[{"name":"Bowen disease of the penis","type":"exact"},{"name":"Bowen's disease of penis","type":"exact"},{"name":"Bowen's disease of the penis","type":"exact"},{"name":"Queyrat erythroplasia","type":"exact"},{"name":"Queyrat's erythroplasia","type":"exact"},{"name":"carcinoma in situ of penis","type":"exact"},{"name":"carcinoma in situ of the penis","type":"exact"},{"name":"erythroplasia of Queyrat","type":"exact"},{"name":"grade III penile intraepithelial neoplasia","type":"exact"},{"name":"grade III squamous intraepithelial lesion of penis","type":"exact"},{"name":"grade III squamous intraepithelial lesion of the penis","type":"exact"},{"name":"penile carcinoma in situ","type":"exact"},{"name":"penile carcinoma in situ aJCC v7","type":"exact"},{"name":"penile intraepithelial neoplasia grade III","type":"exact"},{"name":"penis in situ carcinoma","type":"exact"},{"name":"stage 0 penile carcinoma in situ","type":"exact"},{"name":"stage 0 penis carcinoma","type":"exact"}],"termid":"MONDO:0004671","xrefs":{"Monarch":{"xref_id":"0004671"}}}


id: MONDO:0017399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Right temporal lobar atrophy (RTLA) is an anatomic variant of frontotemporal dementia (FTD), characterized by behavioral dysfunction, personality changes, episodic memory loss, and prosopagnosia; attributable to an asymmetrical predominantly right-sided, frontotemporal atrophy.","definition_xrefs":["Orphanet:293848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semantic dementia","termid":"MONDO:0010857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia, right temporal atrophy variant","secondary_identifiers":["SCTID:716667005"],"synonyms":[{"name":"RTLA","type":"exact"},{"name":"rvFTD","type":"exact"}],"termid":"MONDO:0017399","xrefs":{"Monarch":{"xref_id":"0017399"}}}


id: GO:0009789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of abscisic acid (ABA) signaling.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid-activated signaling pathway","termid":"GO:0009787"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of abscisic acid-activated signaling pathway","synonyms":[{"name":"activation of abscisic acid mediated signaling","type":"narrow"},{"name":"positive regulation of abscisic acid mediated signaling pathway","type":"related"},{"name":"positive regulation of abscisic acid mediated signalling","type":"exact"},{"name":"stimulation of abscisic acid mediated signaling","type":"narrow"},{"name":"up regulation of abscisic acid mediated signaling","type":"exact"},{"name":"up-regulation of abscisic acid mediated signaling","type":"exact"},{"name":"upregulation of abscisic acid mediated signaling","type":"exact"}],"termid":"GO:0009789"}


id: FYPO:0003517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-selenoneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular L-selenoneine level during vegetative growth","synonyms":[{"name":"increased L-selenoneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-selenoneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003517"}


id: GO:0021816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rearrangements of the microtubule cytoskeleton that result in the extension of a leading process, where this process is involved in the movement of cells along radial glial cells.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration","termid":"GO:0021815"},{"relation_name":"is_a","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration","termid":"GO:0021816"}


id: MOD:02019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-timnodonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-timnodonoylated residue","termid":"MOD:02020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-timnodonoyl-L-lysine","termid":"MOD:02019"}


id: GO:0015914
data:
  {"annotated_genes":["SJAG_03172","SJAG_00587","SJAG_03851","SJAG_03338","SJAG_01095","SJAG_00576","SJAG_05209","SJAG_02897","SJAG_00589","SJAG_01470","SJAG_02943","SJAG_02114","SJAG_16459","SJAG_01229","SJAG_03741","SJAG_01305","SJAG_02957","SJAG_02516","SJAG_01731","SJAG_02581","SJAG_00669","SJAG_03209","SJAG_03721","SJAG_05268","SJAG_04734","SJAG_01945","SJAG_04370","SJAG_03050","SJAG_00230","SJAG_03710","SJAG_01225","SJAG_06440","SJAG_02132","SJAG_03416","SJAG_00018","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68999,102697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[75137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015917"},{"annotations":[89585,91260,109905,104406,100891,107115,101644,116633,106222,97847,97913,107892,108021,109031,98987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[73233,74898,90879,75156,101646,73393,90880,90877,90875,90882,102576,60066,90876,99832,90874,90878,72512,109891,90881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[73569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phospholipid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1483196"],"termid":"GO:0015914","terms_by_termid":{"GO:0015917":null,"GO:0017121":null,"GO:0045332":null,"GO:0120010":null,"GO:0140331":null}}


id: PATO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000377 frequency value (obsolete PATO:0000377)","termid":"PATO:0000377"}


id: PATO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being still one contiguous whole but structurally damaged such that in danger of become two or more.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially broken","termid":"PATO:0002082"}


id: GO:2001114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"positively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"positive regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001114"}


id: PBO:0065043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2","termid":"PBO:0065043"}


id: PBO:0051657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 2","termid":"PBO:0051657"}


id: PBO:0086778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDL241W is not an essential gene","termid":"PBO:0086778"}


id: PBO:0056274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAN1B1 divergent transcript","termid":"PBO:0056274"}


id: PATO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm lacking pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular rhythm","termid":"PATO:0001845"}


id: PBO:0068208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 515","termid":"PBO:0068208"}


id: FYPO:0000003
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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id: MONDO:1012897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any heart disorder characterized by pathologically accelerated cardiac repolarization and increased ventricular tachycardia/fibrillation inducibility that occurs in rabbits due to a mutation in the KCNH2 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:30496390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short QT syndrome, KCNH2-related, rabbit","secondary_identifiers":["OMIA:002441-9986"],"termid":"MONDO:1012897","xrefs":{"Monarch":{"xref_id":"1012897"}}}


id: PBO:0050482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA10 antisense RNA","termid":"PBO:0050482"}


id: PBO:0075136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A","termid":"PBO:0075136"}


id: PBO:0041169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 3 pseudogene 1","termid":"PBO:0041169"}


id: GO:1990937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of one or more acetyl groups to a xylan molecule.","definition_xrefs":["PMID:26745802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"},{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylan acetylation","termid":"GO:1990937"}


id: PBO:0031513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_molecular_function","termid":"PBO:0031513"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: MONDO:0015243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic bronchopulmonary aspergillosis (ABPA) is a rare immunologic pulmonary disorder caused by hypersensitivity to Aspergillus fumigatus, clinically manifesting with poorly controlled asthma and recurrent pulmonary infiltrates.","definition_xrefs":["Orphanet:1164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic respiratory disease","termid":"MONDO:0000771"},{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic bronchopulmonary aspergillosis","secondary_identifiers":["UMLS:C3278302","icd11.foundation:1591607082","ICD9:518.6","DOID:13166","MESH:D001229","NCIT:C84547","OMIM:103920","ICD10CM:B44.81","EFO:0007140","SCTID:37981002","ICD10EXP:B44.1+","MEDGEN:479932","ICD10EXP:J99.8*","GARD:602","MedDRA:10006474"],"synonyms":[{"name":"ABPA","type":"exact"},{"name":"Hinson-Pepys disease","type":"exact"},{"name":"allergic aspergillosis","type":"exact"},{"name":"allergic bronchopulmonary aspergillosis, familial","type":"related"},{"name":"allergic bronchopulmonary mycosis","type":"related"},{"name":"aspergillosis, allergic bronchopulmonary","type":"related"},{"name":"pulmonary aspergillus disease","type":"exact"}],"termid":"MONDO:0015243","xrefs":{"Monarch":{"xref_id":"0015243"}}}


id: PR:Q9P7D6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.12 gene.","definition_xrefs":["UniProtKB:Q9P7D6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0303 protein P4H10.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.12","synonyms":[{"name":"Spom972h-SPBP4H10.12","type":"exact"}],"termid":"PR:Q9P7D6"}


id: MONDO:0008799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anophthalmia-esophageal atresia syndrome belongs to the group of syndromic microphthalmias and is characterized by the association of uni- or bilateral anophthalmia or microphthalmia, and esophageal atresia with or without trachoesophageal fistula.","definition_xrefs":["Orphanet:77298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anophthalmia/microphthalmia-esophageal atresia syndrome","secondary_identifiers":["UMLS:C1859773","ICD9:758.5","GARD:1443","OMIM:206900","DOID:0111801","MEDGEN:347232","SCTID:698851003"],"synonyms":[{"name":"Aeg syndrome","type":"related"},{"name":"MCOPS3","type":"exact"},{"name":"SOX2 anophthalmia syndrome","type":"related"},{"name":"SOX2-related eye disorders","type":"related"},{"name":"anophthalmia clinical with associated anomalies","type":"related"},{"name":"anophthalmia esophageal genital syndrome","type":"related"},{"name":"anophthalmia microphthalmia esophageal atresia","type":"related"},{"name":"anophthalmia, clinical, with associated anomalies","type":"related"},{"name":"anophthalmia-esophageal-genital syndrome","type":"related"},{"name":"anophthalmia/microphthalmia-esophageal atresia syndrome","type":"exact"},{"name":"microphthalmia and esophageal atresia syndrome","type":"related"},{"name":"microphthalmia, syndromic 3","type":"related"},{"name":"microphthalmia, syndromic type 3","type":"exact"},{"name":"optic nerve hypoplasia and abnormalities of the central nervous system","type":"related"},{"name":"syndromic microphthalmia type 3","type":"exact"},{"name":"syndromic microphthalmia, type 3","type":"related"}],"termid":"MONDO:0008799","xrefs":{"Monarch":{"xref_id":"0008799"}}}


id: PBO:0057284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 504","termid":"PBO:0057284"}


id: PBO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor (predicted)","termid":"PBO:0005436"}


id: PBO:0050128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 38","termid":"PBO:0050128"}


id: MONDO:0018870
data:
  {"annotated_genes":["SJAG_03785","SJAG_05213","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87012,87014,87013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013768"}]},"cv_name":"mondo","definition":"Idiopathic arterial calcification of infancy is a rare condition characterized by extensive calcification and stenosis of the large and medium sized arteries.","definition_xrefs":["Orphanet:51608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"arterial calcification of infancy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8380","NORD:2001","OMIMPS:208000","MEDGEN:395331","MESH:C537440","DOID:0050644","UMLS:C1859727"],"synonyms":[{"name":"Generalized Arterial Calcification of Infancy","type":"exact"},{"name":"IIAC","type":"related"},{"name":"generalised arterial calcification in infancy","type":"related"},{"name":"generalised arterial calcification of infancy","type":"exact"},{"name":"generalized arterial calcification in infancy","type":"related"},{"name":"generalized arterial calcification of infancy","type":"exact"},{"name":"idiopathic infantile arterial calcification","type":"exact"},{"name":"idiopathic obliterative arteriopathy","type":"exact"},{"name":"infantile arteriosclerosis","type":"exact"},{"name":"occlusive infantile arteriopathy","type":"exact"}],"termid":"MONDO:0018870","terms_by_termid":{"MONDO:0013768":null},"xrefs":{"Monarch":{"xref_id":"0018870"}}}


id: MONDO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung adenocarcinoma characterized by the presence of mucin pools containing islands of well differentiated adenocarcinoma cells.","definition_xrefs":["NCIT:C45512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung colloid adenocarcinoma","secondary_identifiers":["MEDGEN:313370","DOID:0080303","DOID:0080304","UMLS:C1708776"],"synonyms":[{"name":"lung colloid adenocarcinoma","type":"exact"},{"name":"lung mucinous cystadenocarcinoma","type":"exact"},{"name":"lung mucinous cystic tumor of borderline malignancy","type":"exact"},{"name":"lung mucinous cystic tumour of borderline malignancy","type":"exact"},{"name":"mucinous lung adenocarcinoma","type":"related"}],"termid":"MONDO:0027772","xrefs":{"Monarch":{"xref_id":"0027772"}}}


id: FYPO:0006820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate of cell growth is abnormal. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell growth rate","termid":"FYPO:0006820"}


id: PBO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn2","termid":"PBO:0000880"}


id: GO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lutein catabolic process","synonyms":[{"name":"lutein breakdown","type":"exact"},{"name":"lutein catabolism","type":"exact"},{"name":"lutein degradation","type":"exact"}],"termid":"GO:0062172"}


id: PATO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the back or upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal to","synonyms":[{"name":"dorsal","type":"exact"},{"name":"posterior_to (human torso)","type":"exact"},{"name":"superior_to (human head)","type":"exact"}],"termid":"PATO:0001233"}


id: MONDO:0008301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Guttmacher syndrome is an extremely rare syndrome characterized by hypoplastic thumbs and halluces, 5th finger clinobrachydactyly, postaxial polydactyly of the hands, short or uniphalangeal 2nd toes with absent nails and hypospadias.","definition_xrefs":["Orphanet:2957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guttmacher syndrome","secondary_identifiers":["DOID:0111544","MESH:C538278","OMIM:176305","GARD:4470","MEDGEN:401304","SCTID:722452004","UMLS:C1867801"],"synonyms":[{"name":"Guttmacher syndrome","type":"exact"},{"name":"autosomal dominant preaxial deficiency, postaxial polydactyly, and hypospadias","type":"related"},{"name":"preaxial deficiency, postaxial polydactyly and hypospadias","type":"related"},{"name":"preaxial deficiency, postaxial polydactyly, and hypospadias","type":"related"},{"name":"preaxial deficiency-postaxial polydactyly-hypospadias syndrome","type":"exact"}],"termid":"MONDO:0008301","xrefs":{"Monarch":{"xref_id":"0008301"}}}


id: GO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to self antigen","synonyms":[{"name":"down regulation of tolerance induction to self antigen","type":"exact"},{"name":"down-regulation of tolerance induction to self antigen","type":"exact"},{"name":"downregulation of tolerance induction to self antigen","type":"exact"},{"name":"inhibition of tolerance induction to self antigen","type":"narrow"}],"termid":"GO:0002650"}


id: PBO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Ylf2 (predicted)","termid":"PBO:0001786"}


id: GO:0019021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of deoxyribonucleic acid.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA viral genome (obsolete GO:0019021)","termid":"GO:0019021"}


id: GO:0019207
data:
  {"annotated_genes":["SJAG_00333","SJAG_05017","SJAG_01716","SJAG_02232","SJAG_01411","SJAG_04614","SJAG_00973","SJAG_00100","SJAG_02404","SJAG_03936","SJAG_01210","SJAG_04200","SJAG_00236","SJAG_00318","SJAG_00439","SJAG_01213","SJAG_03525","SJAG_05978","SJAG_01118","SJAG_01274","SJAG_00424","SJAG_03591","SJAG_02026","SJAG_03699","SJAG_01245","SJAG_02332","SJAG_04509","SJAG_03695","SJAG_03340","SJAG_00142","SJAG_05030","SJAG_02605","SJAG_04502","SJAG_02785","SJAG_02057","SJAG_04020","SJAG_03371","SJAG_03931","SJAG_03453","SJAG_01020","SJAG_03618","SJAG_00296","SJAG_02699","SJAG_03974","SJAG_01401","SJAG_00613","SJAG_03090","SJAG_04666","SJAG_04140","SJAG_03802","SJAG_01821","SJAG_01000","SJAG_01605","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098744"},{"annotations":[71372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[92501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[101988,74378,66376,113356,80136,70677,111592,117467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[109278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[74186,70589,71000,106639,108742,62469,71866,79464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[94993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035014"},{"annotations":[91668,72539,70855,107515,78805,112874,116712,70521,89576,73318,99552,111825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[76284,107389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[116534,98110,118778,72954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019887"},{"annotations":[109653,89798,75872,105499,110931,92792,118764,91216,88256,69341,75878,89591,91547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[108789,118435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00296":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01000":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_03974":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"kinase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019207","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019887":null,"GO:0019912":null,"GO:0030291":null,"GO:0030295":null,"GO:0035014":null,"GO:0043539":null,"GO:0061575":null,"GO:0098744":null}}


id: PBO:0031500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_pH","termid":"PBO:0031500"}


id: MONDO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring corneal ulcer","secondary_identifiers":["UMLS:C0155068","SCTID:111520007","ICD9:370.02","MEDGEN:509766","DOID:10444","icd11.foundation:1877531217"],"termid":"MONDO:0001037","xrefs":{"Monarch":{"xref_id":"0001037"}}}


id: PBO:0087556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Mtc1p, along with Rtc1p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; relative distribution to the vacuolar membrane decreases upon DNA replication stress","termid":"PBO:0087556"}


id: PBO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 46","termid":"PBO:0045856"}


id: PBO:0018188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial magnesium ion transmembrane transporter Mme1 (predicted)","termid":"PBO:0018188"}


id: MONDO:0030513
data:
  {"annotated_genes":["SJAG_00690","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86449,86450],"is_not":false,"summary":null,"term":"MONDO:0030513"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794264","DOID:0060940","OMIM:619687","UMLS:C5562054"],"synonyms":[{"name":"DYT33","type":"exact"}],"termid":"MONDO:0030513","terms_by_termid":{"MONDO:0030513":null},"xrefs":{"Monarch":{"xref_id":"0030513"}}}


id: PBO:0015677
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAt1 Compensation","termid":"PBO:0015677"}


id: PBO:0070004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1300, pseudogene","termid":"PBO:0070004"}


id: GO:0052240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052240)","synonyms":[{"name":"positive chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052240"}


id: PBO:0069457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 722, pseudogene","termid":"PBO:0069457"}


id: GO:0019363
data:
  {"annotated_genes":["SJAG_04467","SJAG_02889","SJAG_04693","SJAG_02618","SJAG_01500","SJAG_03298","SJAG_01582","SJAG_01566","SJAG_00957","SJAG_03946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113475,77818,75118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[99701,80295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[78306,71489,80217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[89375,91008,109996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:jl","GOC:pde","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04467":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide anabolism","type":"exact"},{"name":"pyridine nucleotide biosynthesis","type":"exact"},{"name":"pyridine nucleotide formation","type":"exact"},{"name":"pyridine nucleotide synthesis","type":"exact"}],"termid":"GO:0019363","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0019358":null,"GO:0034355":null}}


id: GO:0060091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmotile primary cilium that is found at the apical surface of auditory receptor cells. The kinocilium is surrounded by actin-based stereocilia.","definition_xrefs":["PMID:15882574","GOC:cilia","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"is_a","term_name":"9+2 non-motile cilium","termid":"GO:0097732"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"},{"relation_name":"part_of","term_name":"organelle","termid":"GO:0043226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"kinocilium","secondary_identifiers":["Wikipedia:Kinocilium"],"termid":"GO:0060091"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: PBO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 8","termid":"PBO:0043729"}


id: PBO:0027531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ribonuclease_activity","termid":"PBO:0027531"}


id: PBO:0005793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein DP1/Yop1","termid":"PBO:0005793"}


id: GO:0033711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-phospho-D-erythronate + NAD+ = (R)-3-hydroxy-2-oxo-4-phosphonooxybutanoate + H+ + NADH.","definition_xrefs":["RHEA:18829","EC:1.1.1.290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-phosphoerythronate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04210","MetaCyc:ERYTHRON4PDEHYDROG-RXN"],"synonyms":[{"name":"4-O-phosphoerythronate dehydrogenase activity","type":"related"},{"name":"4-phospho-D-erythronate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"4PE dehydrogenase activity","type":"related"},{"name":"PdxB","type":"related"},{"name":"PdxB 4PE dehydrogenase activity","type":"related"},{"name":"erythronate-4-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0033711"}


id: PBO:0044620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCC netrin 1 receptor","termid":"PBO:0044620"}


id: PBO:0052939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 23-1","termid":"PBO:0052939"}


id: PBO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin like 1","termid":"PBO:0042931"}


id: PBO:0053200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte expansion molecule","termid":"PBO:0053200"}


id: GO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 NAD+ + UDP-N-acetyl-alpha-D-glucosamine = 3 H+ + 2 NADH + UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate.","definition_xrefs":["RHEA:13325","EC:1.1.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 6-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.136-RXN","KEGG_REACTION:R00421"],"synonyms":[{"name":"UDP-2-acetamido-2-deoxy-D-glucose:NAD oxidoreductase activity","type":"related"},{"name":"UDP-GLcNAc dehydrogenase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"UDPacetylglucosamine dehydrogenase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine dehydrogenase activity","type":"related"}],"termid":"GO:0047004"}


id: PBO:0057595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR924 host gene","termid":"PBO:0057595"}


id: PBO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin","termid":"PBO:0044226"}


id: GO:1990789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of thyroid gland epithelial cells, resulting in the expansion of the thyroid gland epithelial cell population.","definition_xrefs":["PMID:17646383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"thyroid gland development","termid":"GO:0030878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland epithelial cell proliferation","synonyms":[{"name":"Hurthle cell proliferation","type":"narrow"},{"name":"thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1990789"}


id: GO:0015938
data:
  {"annotated_genes":["SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78411],"is_not":false,"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A metabolic process","termid":"GO:0015936"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coenzyme A catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0006765"],"synonyms":[{"name":"CoA catabolism","type":"exact"},{"name":"coenzyme A breakdown","type":"exact"},{"name":"coenzyme A catabolism","type":"exact"},{"name":"coenzyme A degradation","type":"exact"}],"termid":"GO:0015938","terms_by_termid":{"GO:0015938":null}}


id: GO:0021694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar Purkinje cell layer. This process pertains to the initial formation of a structure from unspecified parts. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}


id: GO:0141191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of HRI-mediated signaling.","definition_xrefs":["PMID:38297121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of HRI-mediated signaling","termid":"GO:0141191"}


id: FYPO:0003187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found associated with astral microtubules during mitosis is observed there during mitosis. The protein may or may not normally associate with astral microtubules during other cell cycle phases.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to astral microtubule during mitosis","synonyms":[{"name":"ectopic protein localization to astral microtubule during mitosis","type":"exact"},{"name":"protein mislocalised to astral microtubule during mitosis","type":"exact"},{"name":"protein mislocalized to astral microtubule during mitosis during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to astral microtubule during mitosis during vegetative growth","type":"exact"},{"name":"protein mislocalized to astral microtubule during mitotic M phase","type":"related"},{"name":"protein mislocalized to astral microtubule during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003187"}


id: PBO:0055211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2636","termid":"PBO:0055211"}


id: MONDO:0002926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm with melanocytic differentiation characterized by the presence of polygonal or spindle shaped clear cells. This sarcoma usually affects the tendons and aponeuroses and is associated with a poor prognosis due to recurrences and metastases.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clear cell sarcoma","secondary_identifiers":["ICD9:171.9","ICDO:9044/3","UMLS:C0206651","DOID:4233","MEDGEN:104909","NANDO:2200062","NCIT:C3745","MESH:D018227","SCTID:402561003","ONCOTREE:CCS","EFO:0008498"],"synonyms":[{"name":"adult soft part clear cell sarcoma","type":"exact"},{"name":"chordoid sarcoma","type":"exact"},{"name":"clear cell sarcoma (morphologic abnormality)","type":"exact"},{"name":"clear cell sarcoma - not kidney","type":"exact"},{"name":"clear cell sarcoma of soft parts","type":"exact"},{"name":"clear cell sarcoma of soft tissue","type":"exact"},{"name":"clear cell sarcoma/malignant melanoma of soft parts (excluding clear cell sarcoma of the kidney)","type":"exact"},{"name":"malignant melanoma of soft parts","type":"related"},{"name":"malignant melanoma of soft tissues","type":"exact"},{"name":"malignant melanoma of the soft parts","type":"exact"},{"name":"melanoma, malignant, of soft parts","type":"exact"}],"termid":"MONDO:0002926","xrefs":{"Monarch":{"xref_id":"0002926"}}}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: GO:1900895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"positively_regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tridecane metabolic process","synonyms":[{"name":"activation of tridecane metabolic process","type":"narrow"},{"name":"activation of tridecane metabolism","type":"narrow"},{"name":"positive regulation of tridecane metabolism","type":"related"},{"name":"up regulation of tridecane metabolic process","type":"exact"},{"name":"up regulation of tridecane metabolism","type":"related"},{"name":"up-regulation of tridecane metabolic process","type":"exact"},{"name":"up-regulation of tridecane metabolism","type":"related"},{"name":"upregulation of tridecane metabolic process","type":"exact"},{"name":"upregulation of tridecane metabolism","type":"related"}],"termid":"GO:1900895"}


id: GO:0075245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"regulation of oospore formation","termid":"GO:0075244"},{"relation_name":"positively_regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oospore formation","termid":"GO:0075245"}


id: PATO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's rate of change of the position.","direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"velocity","termid":"PATO:0002242"}


id: PBO:0085184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three repressible acid phosphatases; glycoprotein that is transported to the cell surface by the secretory pathway; induced by phosphate starvation and coordinately regulated by PHO4 and PHO2; PHO11 has a paralog, PHO12, that arose from a segmental duplication","termid":"PBO:0085184"}


id: PBO:0088592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein-associated transcription initiation factor Mot1","termid":"PBO:0088592"}


id: PBO:0088364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase type 11","termid":"PBO:0088364"}


id: PBO:0061101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 4 Y-linked","termid":"PBO:0061101"}


id: MONDO:0018621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"lymphoplasmacytic lymphoma without IgM production","secondary_identifiers":["Orphanet:443159","UMLS:C5680061","GARD:21851","MEDGEN:1814446"],"synonyms":[{"name":"lymphoplasmacytic lymphoma without Immunoglobulin M production","type":"exact"}],"termid":"MONDO:0018621","xrefs":{"Monarch":{"xref_id":"0018621"}}}


id: PBO:0071574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 3","termid":"PBO:0071574"}


id: PBO:0061980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 1 pseudogene","termid":"PBO:0061980"}


id: GO:0019128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-tryptophan.","definition_xrefs":["RESID:AA0198"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan racemization (obsolete GO:0019128)","termid":"GO:0019128"}


id: MONDO:0016318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive multifocal leukoencephalopathy (PML) is a neurological disorder that damages the myelin that covers and protects nerves in the white matter of the brain. It is caused by the JC virus (JCV). By age 10, most people have been infected with this virus, but itrarelycauses symptoms unless the immune system becomes severely weakened.The disease occurs, rarely, in organ transplant patients; people undergoing chronic corticosteroid or immunosuppressive therapy; and individuals with cancer, such as Hodgkins disease, lymphoma, and sarcoidosis. PML is most common among individuals with acquired immune deficiency syndrome (AIDS).","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive multifocal leukoencephalopathy","secondary_identifiers":["MedDRA:10036807","MESH:D007968","SCTID:22255007","ICD10CM:A81.2","NORD:1616","ICD9:046.3","Orphanet:217260","NANDO:1200205","UMLS:C0023524","GARD:7468","MEDGEN:7327","NCIT:C26815","DOID:643","EFO:0007455","icd11.foundation:902939755"],"synonyms":[{"name":"PML","type":"exact"},{"name":"leukoencephalopathy, progressive multifocal","type":"related"},{"name":"progressive multifocal leukoencephalitis","type":"exact"}],"termid":"MONDO:0016318","xrefs":{"Monarch":{"xref_id":"0016318"}}}


id: PBO:0116969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AASDHPPT antisense RNA 1","termid":"PBO:0116969"}


id: GO:0004867
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93546],"is_not":false,"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a serine-type endopeptidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0030234","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"serine-type endopeptidase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-158800","Reactome:R-HSA-159005","Reactome:R-HSA-158893","Reactome:R-HSA-158795","Reactome:R-HSA-159001"],"synonyms":[{"name":"serine protease inhibitor activity","type":"narrow"},{"name":"serine proteinase inhibitor activity","type":"narrow"},{"name":"serpin activity","type":"narrow"}],"termid":"GO:0004867","terms_by_termid":{"GO:0004867":null}}


id: GO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms.","definition_xrefs":["GOC:isa_complete","GOC:jl","ISBN:0198506732","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction (obsolete GO:0000003)","synonyms":[{"name":"reproductive physiological process","type":"exact"}],"termid":"GO:0000003"}


id: PBO:0063921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3IP1 divergent transcript","termid":"PBO:0063921"}


id: PBO:0004106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex subunit Rec8","termid":"PBO:0004106"}


id: MONDO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with perineal fistula (obsolete MONDO:0035780)","secondary_identifiers":["Orphanet:600952"],"termid":"MONDO:0035780","xrefs":{"Monarch":{"xref_id":"0035780"}}}


id: MONDO:0002549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the hypoglossal nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"},{"relation_name":"is_a","term_name":"hypoglossal nerve neoplasm","termid":"MONDO:0002550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannoma of twelfth cranial nerve","secondary_identifiers":["DOID:3197","MEDGEN:235581","NCIT:C5434","UMLS:C1335928"],"synonyms":[{"name":"hypoglossal nerve neurilemmoma","type":"exact"},{"name":"hypoglossal nerve schwannoma","type":"exact"},{"name":"hypoglossal neurilemmoma","type":"exact"},{"name":"hypoglossal schwannoma","type":"exact"},{"name":"neurilemmoma of hypoglossal nerve","type":"exact"},{"name":"neurilemmoma of the hypoglossal nerve","type":"exact"},{"name":"neurilemmoma of the twelfth cranial nerve","type":"exact"},{"name":"neurilemmoma of twelfth cranial nerve","type":"exact"},{"name":"schwannoma of hypoglossal nerve","type":"exact"},{"name":"schwannoma of the hypoglossal nerve","type":"exact"},{"name":"schwannoma of the twelfth cranial nerve","type":"exact"},{"name":"schwannoma of twelfth cranial nerve","type":"exact"},{"name":"twelfth cranial nerve neurilemmoma","type":"exact"},{"name":"twelfth cranial nerve schwannoma","type":"exact"}],"termid":"MONDO:0002549","xrefs":{"Monarch":{"xref_id":"0002549"}}}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:23150719","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: GO:0016289
data:
  {"annotated_genes":["SJAG_04007","SJAG_04895","SJAG_00902","SJAG_02769","SJAG_02985","SJAG_01396","SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"},{"annotations":[75927,77164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003986"},{"annotations":[107847,102005,97172,80735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-CoA + H2O = a carboxylate + CoA + H+.","definition_xrefs":["RHEA:70423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00902":null,"SJAG_00944":null,"SJAG_01396":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_04007":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-193385"],"synonyms":[{"name":"CoA hydrolase activity","type":"broad"}],"termid":"GO:0016289","terms_by_termid":{"GO:0003860":null,"GO:0003986":null,"GO:0047617":null}}


id: GO:0045571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of imaginal disc growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc growth","termid":"GO:0045570"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"negatively_regulates","term_name":"imaginal disc growth","termid":"GO:0007446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc growth","synonyms":[{"name":"down regulation of imaginal disc growth","type":"exact"},{"name":"down-regulation of imaginal disc growth","type":"exact"},{"name":"downregulation of imaginal disc growth","type":"exact"},{"name":"inhibition of imaginal disc growth","type":"narrow"}],"termid":"GO:0045571"}


id: PBO:0073293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 15","termid":"PBO:0073293"}


id: PBO:0029231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0029231"}


id: GO:0102735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + 3 malonyl-CoA + 3 H+ = 2,4,6-trihydroxybenzophenone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["RHEA:35143","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"trihydroxybenzophenone synthase activity","secondary_identifiers":["MetaCyc:RXN-7481","EC:2.3.1.220"],"termid":"GO:0102735"}


id: GO:0030522
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a receptor located within a cell.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intracellular receptor signaling pathway","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9024446"],"synonyms":[{"name":"intracellular receptor mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0030522","terms_by_termid":{"GO:0009785":null}}


id: GO:0033233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein sumoylation","synonyms":[{"name":"regulation of sumoylation","type":"exact"}],"termid":"GO:0033233"}


id: GO:0050683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AF-1 protein domain, a ligand-independent transactivation domain which is required for the full transcriptional activity of the receptor.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AF-1 domain binding","termid":"GO:0050683"}


id: MONDO:0021068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant neoplasm involving the ovary.","definition_xrefs":["NCIT:C4984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian neoplasm","secondary_identifiers":["UMLS:C0919267","ICD9:239.5","MEDGEN:181539","SCTID:123843001","EFO:0003893"],"synonyms":[{"name":"neoplasm of ovary","type":"exact"},{"name":"neoplasm of the ovary","type":"exact"},{"name":"ovarian neoplasm","type":"exact"},{"name":"ovarian tumor","type":"exact"},{"name":"ovarian tumors","type":"exact"},{"name":"ovarian tumour","type":"exact"},{"name":"ovarian tumours","type":"exact"},{"name":"ovary neoplasm","type":"exact"},{"name":"ovary neoplasm (disease)","type":"exact"},{"name":"ovary tumor","type":"exact"},{"name":"ovary tumour","type":"exact"},{"name":"tumor of ovary","type":"exact"},{"name":"tumor of the ovary","type":"exact"},{"name":"tumour of ovary","type":"exact"},{"name":"tumour of the ovary","type":"exact"}],"termid":"MONDO:0021068","xrefs":{"Monarch":{"xref_id":"0021068"}}}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: MONDO:0008830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aspartylglycosaminuria (AGU) is an autosomal recessive lysosomal storage disease belonging to the oligosaccharidosis group (also called glycoproteinosis).","definition_xrefs":["Orphanet:93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"aspartylglucosaminuria","secondary_identifiers":["NANDO:1200133","GARD:5854","NCIT:C61273","NANDO:2200555","UMLS:C0268225","OMIM:208400","SCTID:54954004","DOID:0050461","icd11.foundation:2143470200","MedDRA:10068220","MEDGEN:78649","MESH:D054880"],"synonyms":[{"name":"AGU","type":"related"},{"name":"Aga deficiency","type":"related"},{"name":"Aspartylglucosamidase (AGA) deficiency","type":"related"},{"name":"Aspartylglycosaminuria","type":"exact"},{"name":"Glycoasparaginase","type":"related"},{"name":"aspartylglucosaminidase deficiency","type":"exact"},{"name":"aspartylglucosaminuria","type":"exact"},{"name":"aspartylglycosaminuria","type":"exact"},{"name":"glycosylasparaginase deficiency","type":"exact"}],"termid":"MONDO:0008830","xrefs":{"Monarch":{"xref_id":"0008830"}}}


id: PBO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 173 pseudogene","termid":"PBO:0070235"}


id: PBO:0040064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP regulated phosphoprotein 19","termid":"PBO:0040064"}


id: PBO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein-specific kinase Dsk1","termid":"PBO:0003355"}


id: MONDO:0023660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 6","secondary_identifiers":["MEDGEN:1785484","UMLS:C5543516","OMIM:619363"],"synonyms":[{"name":"HAE6","type":"exact"}],"termid":"MONDO:0023660","xrefs":{"Monarch":{"xref_id":"0023660"}}}


id: PBO:0089615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport protein Avl9","termid":"PBO:0089615"}


id: PBO:0077065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 1 pseudogene 1","termid":"PBO:0077065"}


id: PBO:0070863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 1","termid":"PBO:0070863"}


id: PBO:0052668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 36","termid":"PBO:0052668"}


id: PBO:0055142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2561","termid":"PBO:0055142"}


id: GO:0030897
data:
  {"annotated_genes":["SJAG_03005","SJAG_01772","SJAG_05194","SJAG_00380","SJAG_01598","SJAG_05184","SJAG_00204","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105005,94676,71640,71556,75466,77488,80175,80549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902500"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex that associates with the vacuolar membrane, late endosomal (multivesicular body) and lysosomal membranes. HOPS is a tethering complex involved in vesicle fusion.","definition_xrefs":["PMID:23645161","PMID:10944212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00380":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"HOPS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030897","terms_by_termid":{"GO:1902500":null}}


id: PBO:0067044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 63, pseudogene","termid":"PBO:0067044"}


id: MONDO:0011368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary carcinoma of the thyroid gland measuring 10mm or less in diameter. The survival rates of patients with this type of carcinoma are the same with those of the normal population.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary thyroid Microcarcinoma","secondary_identifiers":["MEDGEN:313563","ICDO:8341/3","MESH:C563277","OMIM:603744","NCIT:C46004","UMLS:C1709457","GARD:15358"],"synonyms":[{"name":"papillary Microcarcinoma of the thyroid","type":"exact"},{"name":"papillary Microcarcinoma of the thyroid gland","type":"exact"},{"name":"papillary thyroid Microcarcinoma","type":"exact"},{"name":"papillary thyroid gland Microcarcinoma","type":"exact"},{"name":"thyroid gland papillary Microcarcinoma","type":"exact"}],"termid":"MONDO:0011368","xrefs":{"Monarch":{"xref_id":"0011368"}}}


id: GO:0019477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"L-lysine metabolic process","termid":"GO:0046440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-lysine catabolic process","synonyms":[{"name":"L-lysine breakdown","type":"exact"},{"name":"L-lysine catabolism","type":"exact"},{"name":"L-lysine degradation","type":"exact"}],"termid":"GO:0019477"}


id: MONDO:1010475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, cattle","secondary_identifiers":["OMIA:000795-9913"],"termid":"MONDO:1010475","xrefs":{"Monarch":{"xref_id":"1010475"}}}


id: MONDO:0859213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types, 8, with or without heterotaxy","secondary_identifiers":["MEDGEN:1794252","UMLS:C5562042","OMIM:619657"],"termid":"MONDO:0859213","xrefs":{"Monarch":{"xref_id":"0859213"}}}


id: PR:000035569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BUB1:BUB3 complex whose components are encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER","PMID:22660415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1:BUB3 complex (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-(BUB1:BUB3)","type":"exact"}],"termid":"PR:000035569"}


id: GO:0033748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + A = AH2.","definition_xrefs":["EC:1.12.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydrogenase (acceptor) activity","secondary_identifiers":["RHEA:12116","MetaCyc:RXN0-4141"],"synonyms":[{"name":"H2 producing hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:(acceptor) oxidoreductase activity","type":"related"},{"name":"hydrogen:acceptor oxidoreductase activity","type":"related"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0033748"}


id: PBO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1","termid":"PBO:0003182"}


id: PBO:0031279
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_chromosome_segregation","termid":"PBO:0031279"}


id: PBO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 28","termid":"PBO:0072342"}


id: PR:O60174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc6 gene.","definition_xrefs":["UniProtKB:O60174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.05","synonyms":[{"name":"Spom972h-sfc6","type":"exact"},{"name":"TFIIIC subunit sfc6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60174"}


id: MONDO:0012080
data:
  {"annotated_genes":["SJAG_02919","SJAG_03815","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86990,86991,86992],"is_not":false,"summary":null,"term":"MONDO:0012080"}]},"cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the HSPB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 2","termid":"MONDO:0015352"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567084","GARD:18263","UMLS:C2608087","OMIM:608634","DOID:0111207","MEDGEN:382017"],"synonyms":[{"name":"HMN 2B","type":"related"},{"name":"HMN2B","type":"related"},{"name":"HSPB1 neuronopathy, distal hereditary motor","type":"exact"},{"name":"neuronopathy, distal hereditary motor caused by mutation in HSPB1","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type IIB","type":"related"},{"name":"neuropathy, distal hereditary motor, type 2B","type":"related"}],"termid":"MONDO:0012080","terms_by_termid":{"MONDO:0012080":null},"xrefs":{"Monarch":{"xref_id":"0012080"}}}


id: PBO:0013003
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013003"}


id: SO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Fifth intronic position after the intron exon boundary, close to the 5' edge of the intron.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"extended_cis_splice_site","termid":"SO:0001993"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_base_5","synonyms":[{"name":"intron base 5","type":"exact"}],"termid":"SO:0001994"}


id: MONDO:0007542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camurati-Englemann disease (CED) is a rare, clinically variable bone dysplasia syndrome characterized by hyperostosis of the long bones, skull, spine and pelvis, associated with severe pain in the extremities, a wide-based waddling gait, joint contractures, muscle weakness and easy fatigability.","definition_xrefs":["Orphanet:1328"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosclerosis","termid":"MONDO:0002933"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Camurati-Engelmann disease","secondary_identifiers":["UMLS:C0011989","MEDGEN:4268","GARD:1072","ICD9:756.59","DOID:4997","NANDO:2200970","SCTID:318761000119105","NCIT:C84610","OMIM:131300"],"synonyms":[{"name":"CAEND","type":"related"},{"name":"CED","type":"related"},{"name":"Camurati-Engelmann disease","type":"exact"},{"name":"Camurati-Engelmann syndrome","type":"exact"},{"name":"Camurati-Englemann disease","type":"exact"},{"name":"DPD1","type":"related"},{"name":"Engelman's disease","type":"exact"},{"name":"Engelmann disease","type":"related"},{"name":"diaphyseal dysplasia","type":"exact"},{"name":"diaphyseal dysplasia 1, progressive","type":"related"},{"name":"progressive diaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0007542","xrefs":{"Monarch":{"xref_id":"0007542"}}}


id: PBO:0080509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 antisense RNA 1","termid":"PBO:0080509"}


id: PBO:0056202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A10","termid":"PBO:0056202"}


id: GO:1903775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA double-strand break processing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA double-strand break processing","termid":"GO:0000729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA double-strand break processing","termid":"GO:1903775"}


id: FYECO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleic acid","termid":"FYECO:0000049"}


id: GO:0016716
data:
  {"annotated_genes":["SJAG_05311","SJAG_03018","SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000254"},{"annotations":[72842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080132"},{"annotations":[92169,112931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102772"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.18.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03018":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016716","terms_by_termid":{"GO:0000254":null,"GO:0080132":null,"GO:0102772":null}}


id: PR:O14081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 106 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.16c","synonyms":[{"name":"Spom972h-SPACUNK4.16c","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14081"}


id: PBO:0051325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-10 (pseudogene)","termid":"PBO:0051325"}


id: PBO:0112835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved nucleolar protein, human CCDC137 ortholog, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0112835"}


id: GO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + H+ + H2O = 2'-deoxyinosine + NH4+.","definition_xrefs":["GOC:ai","RHEA:28190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"2'-deoxyadenosine deaminase activity","secondary_identifiers":["MetaCyc:ADDALT-RXN"],"synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0046936"}


id: PBO:0087085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L4A; N-terminally acetylated; homologous to mammalian ribosomal protein L4 and bacterial L4; RPL4A has a paralog, RPL4B, that arose from the whole genome duplication","termid":"PBO:0087085"}


id: PBO:0045706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 4","termid":"PBO:0045706"}


id: PBO:0053902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1192","termid":"PBO:0053902"}


id: MONDO:0030787
data:
  {"annotated_genes":["SJAG_03051"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87310],"is_not":false,"summary":null,"term":"MONDO:0030787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 71","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1801153","UMLS:C5676963","DOID:0070570","OMIM:619831"],"synonyms":[{"name":"SPGF71","type":"exact"},{"name":"spermatogenic failure 71","type":"exact"}],"termid":"MONDO:0030787","terms_by_termid":{"MONDO:0030787":null},"xrefs":{"Monarch":{"xref_id":"0030787"}}}


id: PBO:0091788
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Switching of Mating Type","termid":"PBO:0091788"}


id: PBO:0055603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3041","termid":"PBO:0055603"}


id: PBO:0031812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_biofilm_formation","termid":"PBO:0031812"}


id: PBO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAMPT antisense RNA 1","termid":"PBO:0060470"}


id: GO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002866"}


id: FYPO:0000583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"abolished sporulation","synonyms":[{"name":"absent sporulation","type":"exact"},{"name":"ascospore formation abolished","type":"exact"},{"name":"sporulation abolished","type":"exact"},{"name":"sporulation: absent","type":"related"}],"termid":"FYPO:0000583"}


id: PBO:0055114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2533","termid":"PBO:0055114"}


id: PBO:0053481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 456","termid":"PBO:0053481"}


id: PBO:0039674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 4 subunit sigma 1","termid":"PBO:0039674"}


id: GO:1902489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatoblast.","definition_xrefs":["PMID:22412967","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatoblast apoptotic process","synonyms":[{"name":"hepatoblast apoptosis","type":"narrow"}],"termid":"GO:1902489"}


id: GO:0010408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the cell wall arabinogalactan II glycoprotein variant which contains both an arabinogalactan protein (AGP) motif and a fasciclin domain.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"fasciclin-like arabinogalactan protein metabolic process","synonyms":[{"name":"fasciclin-like arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010408"}


id: PR:O14343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp5 gene.","definition_xrefs":["UniProtKB:O14343","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.13","synonyms":[{"name":"Spom972h-klp5","type":"exact"}],"termid":"PR:O14343"}


id: GO:0007455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the eye-antennal disc are generated and organized. This includes the transformation of an eye-antennal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the eye, antenna, head capsule and maxillary palps.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye-antennal disc morphogenesis","synonyms":[{"name":"eye-antennal disc metamorphosis","type":"exact"}],"termid":"GO:0007455"}


id: PR:Q09170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.11c","secondary_identifiers":["UniProtKB:Q09170"],"synonyms":[{"name":"Spom972h-CHEK2","type":"exact"}],"termid":"PR:Q09170"}


id: PBO:0004876
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.70","termid":"PBO:0004876"}


id: PBO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain protein Heh1/Lem2","termid":"PBO:0001428"}


id: PBO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 3","termid":"PBO:0043913"}


id: GO:0044389
data:
  {"annotated_genes":["SJAG_00452","SJAG_01686","SJAG_00615","SJAG_01365","SJAG_01134","SJAG_04335","SJAG_02253","SJAG_03643","SJAG_03843","SJAG_02591","SJAG_01226","SJAG_00032","SJAG_00803","SJAG_01540","SJAG_03575"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75815],"is_not":false,"summary":null,"term":"GO:0044389"},{"annotations":[79425,72260,80646,73135,79541,75256,70799,80083,73297,79677,78877,76068,67697,77375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031625"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin-like protein ligase, such as ubiquitin-ligase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00452":null,"SJAG_00615":null,"SJAG_00803":null,"SJAG_01134":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_01540":null,"SJAG_01686":null,"SJAG_02253":null,"SJAG_02591":null,"SJAG_03575":null,"SJAG_03643":null,"SJAG_03843":null,"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"ubiquitin-like protein ligase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"E3 protein ligase binding","type":"exact"},{"name":"small conjugating protein ligase binding","type":"exact"}],"termid":"GO:0044389","terms_by_termid":{"GO:0031625":null,"GO:0044389":null}}


id: GO:0042724
data:
  {"annotated_genes":["SJAG_02421","SJAG_04067","SJAG_01970","SJAG_02406","SJAG_00381","SJAG_00827","SJAG_04866","SJAG_03538","SJAG_02420","SJAG_04282","SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114071,89393],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[70567,61750,77517,74312,78784,74391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[78591,113983,66040,116411,113977,67728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[110833,110832,99887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), and related compounds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thiamine-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"thiamin and derivative biosynthesis","type":"exact"},{"name":"thiamin and derivative biosynthetic process","type":"exact"},{"name":"thiamin-containing compound biosynthetic process","type":"exact"},{"name":"thiamine and derivative biosynthesis","type":"exact"},{"name":"thiamine and derivative biosynthetic process","type":"exact"},{"name":"thiamine-containing compound anabolism","type":"exact"},{"name":"thiamine-containing compound biosynthesis","type":"exact"},{"name":"thiamine-containing compound formation","type":"exact"},{"name":"thiamine-containing compound synthesis","type":"exact"},{"name":"vitamin B1 and derivative biosynthesis","type":"exact"},{"name":"vitamin B1 and derivative biosynthetic process","type":"exact"}],"termid":"GO:0042724","terms_by_termid":{"GO:0009228":null,"GO:0009229":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:0010165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).","definition_xrefs":["GOC:sm","Wikipedia:X-ray"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ionizing radiation","termid":"GO:0010212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to X-ray","synonyms":[{"name":"response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:0010165"}


id: MONDO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by outdoor allergens.","definition_xrefs":["NCIT:C92188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"seasonal allergic rhinitis","secondary_identifiers":["UMLS:C0018621","MEDGEN:42335","MESH:D006255","EFO:0003956","SCTID:367498001"],"synonyms":[{"name":"hay fever","type":"exact"},{"name":"seasonal allergic rhinitis","type":"exact"}],"termid":"MONDO:0005324","xrefs":{"Monarch":{"xref_id":"0005324"}}}


id: GO:0048642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle tissue development","termid":"GO:0045843"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue development","synonyms":[{"name":"down regulation of skeletal muscle development","type":"exact"},{"name":"down-regulation of skeletal muscle development","type":"exact"},{"name":"downregulation of skeletal muscle development","type":"exact"},{"name":"inhibition of skeletal muscle development","type":"narrow"}],"termid":"GO:0048642"}


id: FYPO:0001128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is lower than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased septation index","synonyms":[{"name":"decreased septation","type":"related"},{"name":"reduced septation index","type":"exact"}],"termid":"FYPO:0001128"}


id: FYPO:0001672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a GTPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal GTPase activity","termid":"FYPO:0001672"}


id: MONDO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial keratitis","termid":"MONDO:0004902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diffuse interstitial keratitis","secondary_identifiers":["ICD9:370.52","DOID:13353","icd11.foundation:1750662534","MEDGEN:509780","SCTID:17157001","UMLS:C0155089"],"termid":"MONDO:0001694","xrefs":{"Monarch":{"xref_id":"0001694"}}}


id: PBO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a/L8 (predicted)","termid":"PBO:0003877"}


id: GO:1905397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD8-positive, alpha-beta T cell.","definition_xrefs":["GOC:TermGenie","PMID:24187568","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905397"}


id: PR:O74850
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diacylglycerol O-acyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.15","secondary_identifiers":["UniProtKB:O74850"],"synonyms":[{"name":"SPCC1235.15","type":"related"},{"name":"Spom972h-DGAT2","type":"exact"},{"name":"diglyceride acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74850"}


id: PBO:0048927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi integral membrane protein 4","termid":"PBO:0048927"}


id: internal:interim
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interim","termid":"internal:interim"}


id: PBO:0063978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 12","termid":"PBO:0063978"}


id: PBO:0082360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-related protein and dual specificity member of the E1 family; mediates the attachment of Atg12p to Atg5p and Atg8p to phosphatidylethanolamine which are required steps in autophagosome formation; E1 enzymes are also known as ubiquitin-activating enzymes; involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0082360"}


id: GO:0060512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a prostate gland are generated and organized.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland morphogenesis","termid":"GO:0060512"}


id: PBO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E like","termid":"PBO:0051582"}


id: PBO:0086953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of filamentous growth; interacts with FLO11 promoter and regulates FLO11 expression; binds to transcription factors Flo8p and Mss11p; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YDL233W is not an essential gene","termid":"PBO:0086953"}


id: GO:1900071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfite transmembrane transport.","definition_xrefs":["PMID:10870099","PMID:10234785","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"regulates","term_name":"sulfite transmembrane transport","termid":"GO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of sulfite transmembrane transport","synonyms":[{"name":"regulation of sulfite transport","type":"exact"},{"name":"regulation of sulphite transport","type":"exact"}],"termid":"GO:1900071"}


id: PBO:0049262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin A","termid":"PBO:0049262"}


id: PR:O14012
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.09 gene.","definition_xrefs":["UniProtKB:O14012","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.09","synonyms":[{"name":"Spom972h-SPAC29A4.09","type":"exact"}],"termid":"PR:O14012"}


id: GO:0106130
data:
  {"annotated_genes":["SJAG_01859","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003999"},{"annotations":[94120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052657"},{"annotations":[76011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004422"},{"annotations":[94123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RMP + diphosphate = R + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["PMID:5123876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01859":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"purine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9748951","Reactome:R-HSA-9734274","Reactome:R-HSA-74215"],"termid":"GO:0106130","terms_by_termid":{"GO:0000310":null,"GO:0003999":null,"GO:0004422":null,"GO:0052657":null}}


id: FYPO:0004205
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119546],"is_not":false,"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased siRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature siRNA level","type":"exact"},{"name":"decreased siRNA accumulation","type":"related"},{"name":"decreased siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased siRNA level during vegetative growth","type":"exact"},{"name":"decreased siRNA transcript level","type":"exact"},{"name":"decreased small interfering RNA level","type":"exact"},{"name":"reduced siRNA level","type":"exact"}],"termid":"FYPO:0004205","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-nonaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:jl","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-nonaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043429)","synonyms":[{"name":"2-nonaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043429"}


id: PBO:0091677
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in probabilistic modeling, the probability of entering mitosis increases as Cdc13 protein levels increase","termid":"PBO:0091677"}


id: PBO:0039160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 5","termid":"PBO:0039160"}


id: PBO:0040506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advillin","termid":"PBO:0040506"}


id: PBO:0011168
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galacose specific flocculation","termid":"PBO:0011168"}


id: MONDO:0008892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PFIC1, a type of progressive familial intrahepathic cholestasis (PFIC), is an infantile hereditary disorder in bile formation that is hepatocellular in origin and associated with extrahepatic features.","definition_xrefs":["Orphanet:79306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis type 1","secondary_identifiers":["icd11.foundation:1414850183","GARD:9802","OMIM:211600","MEDGEN:1645830","UMLS:C4551898","DOID:0070226","NANDO:1201043"],"synonyms":[{"name":"Byler disease","type":"exact"},{"name":"Byler's disease","type":"related"},{"name":"FIC1 deficiency","type":"exact"},{"name":"PFIC1","type":"exact"},{"name":"cholestasis, fatal intrahepatic","type":"related"},{"name":"cholestasis, progressive familial intrahepatic 1","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 1","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, type 1","type":"exact"},{"name":"progressive familial intrahepatic cholestasis","type":"related"},{"name":"severe ATP8B1 deficiency","type":"related"}],"termid":"MONDO:0008892","xrefs":{"Monarch":{"xref_id":"0008892"}}}


id: PBO:0083082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Divalent metal ion transporter involved in manganese homeostasis; has broad specificity for di-valent and tri-valent metals; post-translationally regulated by levels of metal ions; member of the Nramp family of metal transport proteins","termid":"PBO:0083082"}


id: GO:0033157
data:
  {"annotated_genes":["SJAG_04509","SJAG_03453","SJAG_04464","SJAG_01245","SJAG_01311","SJAG_04343","SJAG_03048","SJAG_02592","SJAG_04312","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88251,92378],"is_not":false,"summary":null,"term":"GO:0033157"},{"annotations":[106186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[102214,94168,111400,100805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[91207,102746,94733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033157","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null}}


id: PBO:0034460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thin_stable_microtubule_bundle","termid":"PBO:0034460"}


id: FYPO:0007864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle does not occur during the first meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle pole","type":"exact"},{"name":"abolished protein localization to spindle pole during first meiotic nuclear division","type":"exact"},{"name":"protein localization to meiotic spindle pole during meiosis I abolished","type":"exact"}],"termid":"FYPO:0007864"}


id: PBO:0089167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL family protein Mlh1","termid":"PBO:0089167"}


id: PBO:0067426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 545, pseudogene","termid":"PBO:0067426"}


id: PBO:0071988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 17","termid":"PBO:0071988"}


id: PBO:0017773
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha Amylase Homolog","termid":"PBO:0017773"}


id: GO:0050245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + quercitrin = L-rhamnose + quercetin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete quercitrinase activity (obsolete GO:0050245)","termid":"GO:0050245"}


id: MONDO:0000389
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87100,87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050648","SCTID:43814000","OMIMPS:108720","MEDGEN:1806597","UMLS:C5574658"],"termid":"MONDO:0000389","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0000389"}}}


id: PR:O13804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.07","synonyms":[{"name":"Spom972h-SPAC17H9.07","type":"exact"}],"termid":"PR:O13804"}


id: GO:0035609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a C-terminal, gene-encoded glutamate residue from a protein.","definition_xrefs":["PMID:21074048","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-terminal protein amino acid modification","termid":"GO:0018410"},{"relation_name":"is_a","term_name":"protein deglutamylation","termid":"GO:0035608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein deglutamylation","synonyms":[{"name":"protein primary sequence deglutamylation","type":"exact"}],"termid":"GO:0035609"}


id: GO:0070155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling methionine to methionyl-tRNA in a mitochondrion, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionyl-tRNA aminoacylation","termid":"GO:0006431"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0010467","GO:0140053","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"mitochondrial methionyl-tRNA aminoacylation","termid":"GO:0070155"}


id: FYPO:0006911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hexestrol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on hexestrol","synonyms":[{"name":"normal cell population growth in presence of hexestrol","type":"exact"},{"name":"normal cell population growth on hexestrol","type":"exact"},{"name":"normal cellular response to hexestrol","type":"related"},{"name":"normal vegetative cell population growth on hexestrol","type":"exact"}],"termid":"FYPO:0006911"}


id: PBO:0029453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_cell","termid":"PBO:0029453"}


id: PBO:0065194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF4B pseudogene 1","termid":"PBO:0065194"}


id: PBO:0109102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3107","termid":"PBO:0109102"}


id: MOD:01826
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-129 reporter+balance group.","definition_xrefs":["URL:http://www.piercenet.com/files/2162220.pdf","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex-129 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01826"}


id: MONDO:0001158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of inflexibility, extreme orderliness, and perfectionism which interfere with efficiency and which may manifest in many different contexts, including work and leisure activities, financial matters, and issues of morality or ethics.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsessive-compulsive personality disorder","secondary_identifiers":["DOID:10932","MESH:D003193","ICD10CM:F60.5","MEDGEN:40432","SCTID:1376001","NCIT:C92638","UMLS:C0009595","ICD9:301.4"],"synonyms":[{"name":"OCD","type":"exact"},{"name":"OCPD","type":"exact"},{"name":"anankastic personality disorder","type":"related"},{"name":"obsessional personality","type":"related"}],"termid":"MONDO:0001158","xrefs":{"Monarch":{"xref_id":"0001158"}}}


id: MOD:02074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}


id: PBO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase (predicted)","termid":"PBO:0002377"}


id: GO:0050265
data:
  {"annotated_genes":["SJAG_02370","SJAG_02383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80074,80203],"is_not":false,"summary":null,"term":"GO:0050265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["EC:2.7.7.52","MetaCyc:RNA-URIDYLYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"RNA uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:14785","Reactome:R-HSA-8941312"],"synonyms":[{"name":"TUT activity","type":"related"},{"name":"UTP:RNA uridylyltransferase activity","type":"exact"},{"name":"poly(U) polymerase activity","type":"exact"},{"name":"polynucleotide uridylyltransferase activity","type":"exact"},{"name":"terminal uridylyltransferase activity","type":"related"}],"termid":"GO:0050265","terms_by_termid":{"GO:0050265":null}}


id: GO:0050500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + beta-D-galactopyranosyl-(1->3)-N-acetyl-D-glucosamine = N-acetyl-D-glucosamine + alpha-D-galactopyranose 1-phosphate.","definition_xrefs":["EC:2.4.1.211","MetaCyc:2.4.1.211-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,3-beta-galactosyl-N-acetylhexosamine phosphorylase activity","secondary_identifiers":["RHEA:20285"],"synonyms":[{"name":"beta-1,3-galactosyl-N-acetylhexosamine phosphorylase activity","type":"exact"},{"name":"beta-D-galactopyranosyl-(1,3)-N-acetyl-D-hexosamine:phosphate galactosyltransferase activity","type":"related"},{"name":"beta-D-galactopyranosyl-(1->3)-N-acetyl-D-hexosamine:phosphate galactosyltransferase activity","type":"related"}],"termid":"GO:0050500"}


id: MONDO:0009284
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86573],"is_not":false,"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"inherited glutathione synthetase deficiency","termid":"MONDO:0017909"},{"relation_name":"is_a","term_name":"anemia due to enzyme disorder","termid":"MONDO:0020584"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0019241","MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"glutathione synthetase deficiency without 5-oxoprolinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:343541","icd11.foundation:178842925","Orphanet:289849","MESH:C565545","GARD:17331","OMIM:231900","UMLS:C1856399","DOID:0112252"],"synonyms":[{"name":"CNSHA6","type":"exact"},{"name":"GSSDE","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic, 6, glutatione synthetase deficient","type":"exact"},{"name":"glutathione synthetase deficiency of erythrocytes, hemolytic anaemia due to","type":"related"},{"name":"glutathione synthetase deficiency of erythrocytes, hemolytic anemia due to","type":"exact"},{"name":"hemolytic anaemia due to glutathione synthetase deficiency","type":"exact"},{"name":"hemolytic anemia due to glutathione synthetase deficiency","type":"exact"}],"termid":"MONDO:0009284","terms_by_termid":{"MONDO:0009284":null},"xrefs":{"Monarch":{"xref_id":"0009284"}}}


id: GO:0061780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin loading (obsolete GO:0061780)","termid":"GO:0061780"}


id: PBO:0073215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 5A","termid":"PBO:0073215"}


id: PBO:0038613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like","termid":"PBO:0038613"}


id: PBO:0031577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization","termid":"PBO:0031577"}


id: GO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-alpha-D-galactosyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose.","definition_xrefs":["EC:2.4.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"fucosylgalactoside 3-alpha-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9033961","Reactome:R-HSA-9034053","RHEA:14349","MetaCyc:2.4.1.37-RXN"],"synonyms":[{"name":"B transferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1,2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1->2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"[blood group substance] alpha-galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance B-dependent galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance beta-dependent galactosyltransferase activity","type":"narrow"},{"name":"fucosylglycoprotein 3-alpha-galactosyltransferase activity","type":"related"},{"name":"glycoprotein-fucosylgalactoside alpha-galactosyltransferase activity","type":"exact"},{"name":"histo-blood group B transferase activity","type":"narrow"},{"name":"histo-blood substance B-dependent galactosyltransferase activity","type":"related"},{"name":"histo-blood substance beta-dependent galactosyltransferase activity","type":"narrow"}],"termid":"GO:0004381"}


id: PR:P87057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-histone chromosomal protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.09c","synonyms":[{"name":"Spom972h-nhp6","type":"exact"}],"termid":"PR:P87057"}


id: PBO:0013770
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of loss of CAMP-dependent protein Kinase","termid":"PBO:0013770"}


id: PBO:0072441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 5","termid":"PBO:0072441"}


id: GO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of a gas within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete gas homeostasis (obsolete GO:0033483)","termid":"GO:0033483"}


id: FYPO:0002024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"inviable elongated aseptate cell","termid":"FYPO:0002066"},{"relation_name":"is_a","term_name":"inviable multinucleate aseptate vegetative cell","termid":"FYPO:0004106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multinucleate aseptate vegetative cell","type":"exact"},{"name":"septation initiation defective","type":"related"},{"name":"sid","type":"related"}],"termid":"FYPO:0002024"}


id: PBO:0042829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 2","termid":"PBO:0042829"}


id: SO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the chromosome between the centromere and the telomere. Human chromosomes have two arms, the p arm (short) and the q arm (long) which are separated from each other by the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_arm","synonyms":[{"name":"chromosome arm","type":"exact"}],"termid":"SO:0000105"}


id: GO:0052559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host immune response (obsolete GO:0052559)","synonyms":[{"name":"activation by symbiont of host immune response","type":"exact"},{"name":"induction by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host immune response","type":"related"},{"name":"stimulation by symbiont of host immune response","type":"related"},{"name":"up regulation by symbiont of host immune response","type":"related"},{"name":"up-regulation by symbiont of host immune response","type":"related"},{"name":"upregulation by symbiont of host immune response","type":"exact"}],"termid":"GO:0052559"}


id: PR:Q10064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PI3/PI4-kinase family protein C1F5.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.11c","synonyms":[{"name":"Spom972h-tra2","type":"exact"}],"termid":"PR:Q10064"}


id: PBO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_dependency","termid":"PBO:0000010"}


id: GO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0014808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"}


id: PBO:0066130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASSF8 antisense RNA 1","termid":"PBO:0066130"}


id: PBO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, congenital disorders of glycosylation","termid":"PBO:0014268"}


