# terms

id: GO:0035177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a larva through a feeding substrate whilst feeding on food.","definition_xrefs":["PMID:12848927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"},{"relation_name":"is_a","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval foraging behavior","synonyms":[{"name":"larval foraging behaviour","type":"exact"}],"termid":"GO:0035177"}


id: GO:0016877
data:
  {"annotated_genes":["SJAG_02146","SJAG_03909","SJAG_05032","SJAG_00645","SJAG_00878","SJAG_03950","SJAG_03896","SJAG_02084","SJAG_00853","SJAG_02741","SJAG_02082","SJAG_00947","SJAG_03471","SJAG_00604","SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[73857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019778"},{"annotations":[73858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019779"},{"annotations":[115255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016405"},{"annotations":[77135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[105969,113814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[71784,79949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019781"},{"annotations":[105970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[116157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[105971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[75713,72141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"},{"annotations":[96568,98118,75971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019948"},{"annotations":[74282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004839"},{"annotations":[70081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008641"},{"annotations":[74590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042292"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.2.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00645":null,"SJAG_00853":null,"SJAG_00878":null,"SJAG_00947":null,"SJAG_01524":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_02146":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03896":null,"SJAG_03909":null,"SJAG_03950":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming carbon-sulfur bonds","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ligase activity, forming carbon-sulphur bonds","type":"exact"}],"termid":"GO:0016877","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0004839":null,"GO:0008641":null,"GO:0016405":null,"GO:0019778":null,"GO:0019779":null,"GO:0019781":null,"GO:0019948":null,"GO:0031956":null,"GO:0042292":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: GO:1905931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:BHF","PMID:25089138","GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905064"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905916"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905930"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"down regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"inhibition of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of VSMC differentiation involved in phenotypic switching","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"negative regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905931"}


id: GO:0016811
data:
  {"annotated_genes":["SJAG_03227","SJAG_00581","SJAG_04939","SJAG_03775","SJAG_03844","SJAG_00964","SJAG_01987","SJAG_02276","SJAG_03627","SJAG_01416","SJAG_00450","SJAG_05287","SJAG_00691","SJAG_01231","SJAG_00476","SJAG_03013","SJAG_00811","SJAG_02618","SJAG_00392","SJAG_04467","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66084,88882,100706],"is_not":false,"summary":null,"term":"GO:0016811"},{"annotations":[115081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[92131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[64510,78765,93785,77819,111472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[64147,109852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[109853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[109854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[109855,97572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[109856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[109857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[70954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[109997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[72784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[105106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[79280,67840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[78860,79282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[59016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[62458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.","definition_xrefs":["EC:3.5.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00450":null,"SJAG_00476":null,"SJAG_00581":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01231":null,"SJAG_01416":null,"SJAG_01987":null,"SJAG_02276":null,"SJAG_02618":null,"SJAG_02766":null,"SJAG_03013":null,"SJAG_03227":null,"SJAG_03627":null,"SJAG_03775":null,"SJAG_03844":null,"SJAG_04467":null,"SJAG_04939":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9673054","Reactome:R-HSA-9673053"],"termid":"GO:0016811","terms_by_termid":{"GO:0000224":null,"GO:0000225":null,"GO:0004099":null,"GO:0004359":null,"GO:0004848":null,"GO:0008418":null,"GO:0008936":null,"GO:0009039":null,"GO:0016811":null,"GO:0031078":null,"GO:0032129":null,"GO:0034739":null,"GO:0043530":null,"GO:0050152":null,"GO:0070773":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: SO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The restriction enzyme cleavage junction on the 3' strand of the nucleotide sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"single_strand_restriction_enzyme_cleavage_site","termid":"SO:0001694"},{"relation_name":"part_of","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_restriction_enzyme_junction","synonyms":[{"name":"3' restriction enzyme junction","type":"exact"}],"termid":"SO:0001690"}


id: PBO:0064559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POMP pseudogene 1","termid":"PBO:0064559"}


id: PBO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups1","termid":"PBO:0001830"}


id: PBO:0073160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61G pseudogene 1","termid":"PBO:0073160"}


id: GO:0044159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure within the host cell that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the host plasma membrane. In eukaryotic host cells they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid","termid":"GO:0044159"}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: GO:0140909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of doubling of the number of maxicircles and minicircles and distribution of the progeny into two daughter networks, which are identical to the parent kinetoplast DNA network.","definition_xrefs":["PMID:15967722","PMID:8561456","GOC:ach","PMID:12455998","PMID:17462016","PMID:8045928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"kinetoplast DNA replication","synonyms":[{"name":"kDNA replication","type":"exact"},{"name":"kinetoplast DNA synthesis","type":"exact"},{"name":"replication of kinetoplast DNA","type":"exact"}],"termid":"GO:0140909"}


id: PBO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_localization","termid":"PBO:0031830"}


id: PBO:0055026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2441","termid":"PBO:0055026"}


id: MONDO:0017904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Steroid dehydrogenase deficiency-dental anomalies syndrome is an autosomal recessive liver disease which was associated with numerical dental aberrations in a consanguineous Arabi Saudi family. This association suggests that the same gene is involved in both defects. General hypomineralisation and enamel hypoplasia found in this family is thought to be secondary to malabsorption due to liver disease.","definition_xrefs":["Orphanet:3196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"steroid dehydrogenase deficiency-dental anomalies syndrome","secondary_identifiers":["MEDGEN:419431","SCTID:723583009","GARD:5015","UMLS:C2931508","MESH:C537490"],"synonyms":[{"name":"Lyngstadaas syndrome","type":"exact"},{"name":"severe dental aberrations in familial steroid dehydrogenase deficiency","type":"related"},{"name":"steroid dehydrogenase deficiency dental anomalies","type":"related"}],"termid":"MONDO:0017904","xrefs":{"Monarch":{"xref_id":"0017904"}}}


id: PBO:0041124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7","termid":"PBO:0041124"}


id: GO:1903882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:krc","PMID:20054338","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"negatively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of IL-17-mediated signalling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"negative regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903882"}


id: GO:0102540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-D-mannose 6-phosphate = beta-D-mannose 6-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-mannose 6-phosphate 1-epimerase activity (obsolete GO:0102540)","termid":"GO:0102540"}


id: MONDO:0957537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 58","secondary_identifiers":["MEDGEN:1841277","UMLS:C5830641","OMIM:620451"],"termid":"MONDO:0957537","xrefs":{"Monarch":{"xref_id":"0957537"}}}


id: MONDO:0017133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic systemic or rheumatologic disease (obsolete MONDO:0017133)","termid":"MONDO:0017133","xrefs":{"Monarch":{"xref_id":"0017133"}}}


id: GO:1905572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ganglioside GM1 to membrane.","definition_xrefs":["GO_REF:0000078","GOC:TermGenie","PMID:1454804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ganglioside GM1 transport to membrane","termid":"GO:1905572"}


id: FYECO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed on normal medium after a short incubation in medium containing hydroxyurea.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hydroxyurea treatment","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"acute hydroxyurea treatment","type":"broad"}],"termid":"FYECO:0000434"}


id: GO:0099038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of ceramide from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid floppase activity","termid":"GO:0046623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ceramide floppase activity","synonyms":[{"name":"ATP-dependent ceramide transporter activity","type":"broad"},{"name":"ATPase-coupled ceramide transporter activity","type":"broad"},{"name":"ceramide floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"ceramide-translocating ATPase activity","type":"broad"}],"termid":"GO:0099038"}


id: PBO:0048404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 8","termid":"PBO:0048404"}


id: MONDO:0002852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sarcoma that arises from the mediastinum. Examples include liposarcoma, leiomyosarcoma, and angiosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"},{"relation_name":"is_a","term_name":"mediastinal soft tissue cancer","termid":"MONDO:0037743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum sarcoma","secondary_identifiers":["DOID:4050","MEDGEN:233687","UMLS:C1334678","NCIT:C6606"],"synonyms":[{"name":"mediastinal sarcoma","type":"exact"},{"name":"mediastinum sarcoma","type":"exact"},{"name":"sarcoma of mediastinum","type":"exact"},{"name":"sarcoma of the mediastinum","type":"exact"}],"termid":"MONDO:0002852","xrefs":{"Monarch":{"xref_id":"0002852"}}}


id: PBO:0040399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1","termid":"PBO:0040399"}


id: PBO:0053354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 251","termid":"PBO:0053354"}


id: GO:0051510
data:
  {"annotated_genes":["SJAG_02169","SJAG_02392","SJAG_03581","SJAG_00244","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94939,96206,90221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[91083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[115439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell elongation","type":"narrow"}],"termid":"GO:0051510","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: MONDO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vulvar sweat gland carcinoma characterized by the presence of clear cells.","definition_xrefs":["NCIT:C40307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenocarcinoma","termid":"MONDO:0006245"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar clear cell hidradenocarcinoma","secondary_identifiers":["DOID:7567","UMLS:C1520076","MEDGEN:275614"],"synonyms":[{"name":"vulvar clear cell hidradenocarcinoma","type":"exact"}],"termid":"MONDO:0004283","xrefs":{"Monarch":{"xref_id":"0004283"}}}


id: PBO:0063220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 9","termid":"PBO:0063220"}


id: PBO:0011152
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ichthyosis","termid":"PBO:0011152"}


id: MONDO:0018147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, acquired, eye disease characterized by progressive visual loss, due to bilateral juxtafoveolar capillary occlusions, capillary telangiectasia, and minimal exudation. It is associated with systemic or cerebral vascular occlusive disease.","definition_xrefs":["Orphanet:353351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic macular telangiectasia type 3","secondary_identifiers":["MEDGEN:1658435","UMLS:C4751436","ICD10CM:H35.5","GARD:21532"],"synonyms":[{"name":"occlusive idiopathic juxtafoveolar retinal telangiectasis","type":"exact"}],"termid":"MONDO:0018147","xrefs":{"Monarch":{"xref_id":"0018147"}}}


id: PBO:0055094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2512","termid":"PBO:0055094"}


id: PBO:0046374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome associated trafficking regulator 1","termid":"PBO:0046374"}


id: PBO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_proline_nitrogen_source","termid":"PBO:0031127"}


id: GO:0016447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic recombination of immunoglobulin gene segments","synonyms":[{"name":"somatic recombination of antibody gene segments","type":"exact"}],"termid":"GO:0016447"}


id: GO:0009247
data:
  {"annotated_genes":["SJAG_04881","SJAG_05327","SJAG_02913","SJAG_03015","SJAG_03953","SJAG_02488","SJAG_02776","SJAG_01570","SJAG_05311","SJAG_01227","SJAG_03801","SJAG_02523","SJAG_00846","SJAG_03066","SJAG_03115","SJAG_04975","SJAG_02168","SJAG_03878","SJAG_00506","SJAG_01860","SJAG_01416","SJAG_03292","SJAG_06383","SJAG_02804","SJAG_03506","SJAG_00831","SJAG_04337","SJAG_04878","SJAG_04924","SJAG_04119","SJAG_04165","SJAG_05278","SJAG_06425","SJAG_04913","SJAG_00068","SJAG_00295","SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72213,93356,63395,78263,63789,77855,78024,89910,104074,60813,58367,73890,58253,78598,87787,75905,57895,77526,77847,104136,62740,73517,75934,58357,78237,76816,70238,76832,73110,75339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[92165,79723,95507,75884,95616,97861,112927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-401"],"synonyms":[{"name":"glycolipid anabolism","type":"exact"},{"name":"glycolipid biosynthesis","type":"exact"},{"name":"glycolipid formation","type":"exact"},{"name":"glycolipid synthesis","type":"exact"}],"termid":"GO:0009247","terms_by_termid":{"GO:0006506":null,"GO:0051999":null}}


id: PBO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_deep_homology_relationship_with","termid":"PBO:0034153"}


id: PBO:0031470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_selenate","termid":"PBO:0031470"}


id: PBO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0000666"}


id: SO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is monocistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_transcript","synonyms":[{"name":"monocistronic transcript","type":"exact"}],"termid":"SO:0000665"}


id: MONDO:0033565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 9","secondary_identifiers":["GARD:18499","MEDGEN:1724427","OMIM:619011","UMLS:C5436599"],"synonyms":[{"name":"OOCYTE MATURATION DEFECT 9","type":"related"},{"name":"OOMD9","type":"related"}],"termid":"MONDO:0033565","xrefs":{"Monarch":{"xref_id":"0033565"}}}


id: PBO:0054107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1472","termid":"PBO:0054107"}


id: PBO:0004913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein (predicted)","termid":"PBO:0004913"}


id: MOD:00004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Artifact entry from Unimod - OBSOLETE because organizational use is no longer required.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00004 artifact (obsolete MOD:00004)","termid":"MOD:00004"}


id: GO:0072360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the vascular cord over time from its initial formation until its mature state. The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis.","definition_xrefs":["PMID:7084422","GOC:mah","ZFA:0005077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"circulatory system development","termid":"GO:0072359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular cord development","termid":"GO:0072360"}


id: PBO:0082841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed acid phosphatase similar to Pho5p; brought to the cell surface by transport vesicles; hydrolyzes thiamin phosphates in the periplasmic space, increasing cellular thiamin uptake; expression is repressed by thiamin","termid":"PBO:0082841"}


id: MOD:00958
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslink between Arg and His sidechains","termid":"MOD:00958"}


id: PR:O14256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G10.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.10c","synonyms":[{"name":"Spom972h-SPAC6G10.10c","type":"exact"}],"termid":"PR:O14256"}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: PBO:0080944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger B-box domain containing","termid":"PBO:0080944"}


id: GO:0055095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"lipoprotein particle mediated signaling","synonyms":[{"name":"lipoprotein mediated signalling","type":"exact"},{"name":"lipoprotein particle mediated signal transduction","type":"exact"},{"name":"lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055095"}


id: PBO:0039818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 2","termid":"PBO:0039818"}


id: GO:0015500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (threonine or serine)(out) + Na+(out) = (threonine or serine)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.4.1"],"gene_count":0,"genotype_count":0,"name":"obsolete threonine/serine:sodium symporter activity (obsolete GO:0015500)","synonyms":[{"name":"threonine/serine:sodium symporter activity","type":"exact"}],"termid":"GO:0015500"}


id: PBO:0028715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_in_stationary_phase","termid":"PBO:0028715"}


id: GO:0019084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral transcription that takes place after early transcription in the viral life cycle, and which involves the transcription of genes required for replication.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"middle viral transcription","synonyms":[{"name":"(delayed) early viral mRNA transcription","type":"related"}],"termid":"GO:0019084"}


id: PBO:0074247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC66A2 pseudogene 1","termid":"PBO:0074247"}


id: MONDO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Riedel's fibrosing thyroiditis (obsolete MONDO:0001948)","termid":"MONDO:0001948","xrefs":{"Monarch":{"xref_id":"0001948"}}}


id: GO:0097433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense body which may contain granules.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao730872736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dense body","termid":"GO:0097433"}


id: MONDO:0015793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiminicore myopathy","termid":"MONDO:0018948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate multiminicore disease with hand involvement","secondary_identifiers":["MEDGEN:396213","Orphanet:178145","GARD:17078","UMLS:C1861753"],"termid":"MONDO:0015793","xrefs":{"Monarch":{"xref_id":"0015793"}}}


id: PBO:0051169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-53","termid":"PBO:0051169"}


id: MONDO:0013956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial defect in the interferon (IFN)-gamma pathway, leading to mild mycobacterial infections.","definition_xrefs":["Orphanet:319595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to partial STAT1 deficiency","secondary_identifiers":["DOID:0111945","UMLS:C4013950","MEDGEN:862387","OMIM:614892"],"synonyms":[{"name":"IMD31A","type":"related"},{"name":"MSMD due to partial STAT1 deficiency","type":"exact"},{"name":"MSMD due to partial signal transducer and activator of transcription 1 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to partial signal transducer and activator of transcription 1 deficiency","type":"exact"},{"name":"STAT1 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"Stat1 deficiency, autosomal dominant","type":"related"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in STAT1","type":"exact"},{"name":"immunodeficiency 31A","type":"related"},{"name":"immunodeficiency 31A, Mycobacteriosis, autosomal dominant","type":"related"},{"name":"immunodeficiency type 31A","type":"exact"}],"termid":"MONDO:0013956","xrefs":{"Monarch":{"xref_id":"0013956"}}}


id: FYPO:0000067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of brefeldin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to brefeldin A","synonyms":[{"name":"resistance to BFA","type":"exact"},{"name":"resistance to brefeldin A during mitotic cell cycle","type":"related"},{"name":"resistance to brefeldin A during vegetative growth","type":"exact"},{"name":"resistant to Brefeldin A","type":"exact"}],"termid":"FYPO:0000067"}


id: MONDO:0035614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sporadic human prion disease characterized by adult onset of progredient neurodegeneration presenting as a combination of psychiatric, sleep, and oculomotor disturbances, with development of progressive cognitive impairment (the predominantly affected cognitive domains being memory, temporal and/or spatial orientation, language, executive functions, and attention), postural instability, and sometimes additional motor abnormalities and autonomic hyperactivity, in the course of the disease. Bilateral thalamic hypometabolism on FDG-PET imaging and positive prion seeding activity in the cerebrospinal fluid are present in many cases. The disease is fatal within typically two to three years.","definition_xrefs":["Orphanet:586130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"human prion disease","termid":"MONDO:0018926"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"sporadic fatal insomnia","secondary_identifiers":["MEDGEN:1799312","GARD:22349","ICD10CM:A81.9","UMLS:C5567889"],"termid":"MONDO:0035614","xrefs":{"Monarch":{"xref_id":"0035614"}}}


id: MONDO:0017647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postinfectious autoimmune disease with chorea (obsolete MONDO:0017647)","secondary_identifiers":["Orphanet:306727"],"termid":"MONDO:0017647","xrefs":{"Monarch":{"xref_id":"0017647"}}}


id: PBO:0051051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-8","termid":"PBO:0051051"}


id: PBO:0041745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 2","termid":"PBO:0041745"}


id: PBO:0061937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 4 pseudogene","termid":"PBO:0061937"}


id: MONDO:0054733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 29","secondary_identifiers":["DOID:0111930","MEDGEN:1648499","OMIM:618091","UMLS:C4748142"],"synonyms":[{"name":"SPGF29","type":"related"},{"name":"spermatogenic failure 29","type":"exact"}],"termid":"MONDO:0054733","xrefs":{"Monarch":{"xref_id":"0054733"}}}


id: GO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response","synonyms":[{"name":"activation of defense response","type":"narrow"},{"name":"stimulation of defense response","type":"narrow"},{"name":"up regulation of defense response","type":"exact"},{"name":"up-regulation of defense response","type":"exact"},{"name":"upregulation of defense response","type":"exact"}],"termid":"GO:0031349"}


id: PBO:0090994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase/kynurenine-oxoglutarate transaminase","termid":"PBO:0090994"}


id: GO:1990268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold nanoparticle stimulus.","definition_xrefs":["PMID:23150627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to transition metal nanoparticle","termid":"GO:1990267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gold nanoparticle","termid":"GO:1990268"}


id: GO:0062121
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102753],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle chromosome organization process in which LinE complexes closely associate with chromatin during meiotic prophase to form mature linear elements.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"linear element assembly","termid":"GO:0030999"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"linear element maturation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LinE chromosome loading","type":"exact"},{"name":"LinE focus formation","type":"exact"}],"termid":"GO:0062121","terms_by_termid":{"GO:0062123":null}}


id: MONDO:0859515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 10b, mild variant","secondary_identifiers":["MEDGEN:762102","DOID:0081345","OMIM:620249","UMLS:C3541476"],"termid":"MONDO:0859515","xrefs":{"Monarch":{"xref_id":"0859515"}}}


id: PR:Q9UT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC806.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide/nicotinic acid mononucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.06c","synonyms":[{"name":"NMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMN/NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC806.06c","type":"exact"},{"name":"nicotinamide-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nicotinate-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT53"}


id: MONDO:0020845
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86779],"is_not":false,"summary":null,"term":"MONDO:0020845"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618098","MEDGEN:1648331","UMLS:C4748184","DOID:0111524"],"synonyms":[{"name":"PEOB5","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 5","type":"exact"}],"termid":"MONDO:0020845","terms_by_termid":{"MONDO:0020845":null},"xrefs":{"Monarch":{"xref_id":"0020845"}}}


id: GO:0072378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of the cascade of enzymatic reactions initiated by physical damage to the wall of a blood vessel, leading to the formation of a formation of a fibrin clot at the site of the injury. The process also includes numerous positive and negative regulatory events.","definition_xrefs":["GOC:pde","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}


id: PBO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 2","termid":"PBO:0060780"}


id: PBO:0090166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp6","termid":"PBO:0090166"}


id: FYECO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which Calcofluor White was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Calcofluor White","termid":"FYECO:0000113"}


id: GO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the detection of carbon dioxide levels in the brain stem. Increased levels activate the sympathetic vasoconstrictor mechanism increasing the force with which blood flows through the circulatory system.","definition_xrefs":["GOC:dph","GOC:tb","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by ischemic conditions","synonyms":[{"name":"CNS ischemic response","type":"related"},{"name":"ischemic control of blood pressure","type":"related"},{"name":"ischemic regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001980"}


id: MONDO:0004865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media involving thick, viscid and mucuslike fluid effusion due to which the drum appears blue in color.","definition_xrefs":["DOID:9736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue drum syndrome","secondary_identifiers":["ICD9:381.02","SCTID:52353000","UMLS:C0395863","MEDGEN:583099"],"synonyms":[{"name":"acute mucoid otitis media","type":"exact"},{"name":"acute non-suppurative otitis media - mucoid","type":"related"},{"name":"blue drum syndrome","type":"exact"}],"termid":"MONDO:0004865","xrefs":{"Monarch":{"xref_id":"0004865"}}}


id: PR:Q10343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-AMP-activated protein kinase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-AMP-activated protein kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.08c","secondary_identifiers":["UniProtKB:Q10343"],"synonyms":[{"name":"AMPK gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AMPK subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRKAG1","type":"exact"}],"termid":"PR:Q10343"}


id: GO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase II","secondary_identifiers":["Reactome:R-HSA-6807505"],"synonyms":[{"name":"snRNA transcription from Pol II promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0042795"}


id: MONDO:0012372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features (obsolete MONDO:0012372)","termid":"MONDO:0012372","xrefs":{"Monarch":{"xref_id":"0012372"}}}


id: GO:0007399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system development","secondary_identifiers":["Reactome:R-HSA-9675108"],"synonyms":[{"name":"pan-neural process","type":"related"}],"termid":"GO:0007399"}


id: PBO:0062815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 6","termid":"PBO:0062815"}


id: GO:0019107
data:
  {"annotated_genes":["SJAG_00102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004379"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (CH3-[CH2]12-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"myristoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-141367","Reactome:R-HSA-162914"],"termid":"GO:0019107","terms_by_termid":{"GO:0004379":null}}


id: PR:Q09761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sld3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.06","synonyms":[{"name":"Spom972h-sld3","type":"exact"},{"name":"meiotically up-regulated gene 175 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09761"}


id: GO:0075227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of encysted zoospore germination","synonyms":[{"name":"modulation of encysted zoospore germination on or near host","type":"exact"},{"name":"regulation of encysted zoospore germination on or near host","type":"narrow"}],"termid":"GO:0075227"}


id: PBO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Sfr1 foci in rhp54 delta cells","termid":"PBO:0002175"}


id: PBO:0108509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in pyrimidine or lysine metabolism","termid":"PBO:0108509"}


id: MONDO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the intrahepatic or extrahepatic bile ducts. Representative examples of benign neoplasms include bile duct adenoma and extrahepatic bile duct lipoma. Representative examples of malignant neoplasms include intrahepatic and extrahepatic cholangiocarcinoma.","definition_xrefs":["NCIT:C2898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"biliary tract neoplasm","termid":"MONDO:0005304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct neoplasm","secondary_identifiers":["UMLS:C0005396","MESH:D001650","MEDGEN:14114"],"synonyms":[{"name":"bile duct neoplasm","type":"exact"},{"name":"bile duct neoplasm (disease)","type":"exact"},{"name":"bile duct tumor","type":"exact"},{"name":"bile duct tumour","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct neoplasm","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct tumor","type":"exact"},{"name":"intrahepatic and extrahepatic bile duct tumour","type":"exact"},{"name":"neoplasm of bile duct","type":"exact"},{"name":"tumor of bile duct","type":"exact"},{"name":"tumour of bile duct","type":"exact"}],"termid":"MONDO:0021662","xrefs":{"Monarch":{"xref_id":"0021662"}}}


id: MONDO:0032761
data:
  {"annotated_genes":["SJAG_04554"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87504],"is_not":false,"summary":null,"term":"MONDO:0032761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04554":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 114","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22662","DOID:0111642","MEDGEN:1684024","OMIM:618456","UMLS:C5193107"],"synonyms":[{"name":"DFNB114","type":"narrow"},{"name":"deafness, autosomal recessive 114","type":"narrow"}],"termid":"MONDO:0032761","terms_by_termid":{"MONDO:0032761":null},"xrefs":{"Monarch":{"xref_id":"0032761"}}}


id: MONDO:0018101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with normocalciuria and normocalcemia (FPHNN) is a form of familial primary hypomagnesemia (FPH), characterized by low serum magnesium (Mg) values but inappropriate normal urinary Mg values (i.e. renal hypomagnesemia). The typical symptoms are weakness of the limbs, vertigo, headaches, seizures, brisk tendon reflexes and mild to moderate psychomotor delay.","definition_xrefs":["Orphanet:34527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalcuria","termid":"MONDO:0017626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","secondary_identifiers":["SCTID:725031005","UMLS:C4510731","MEDGEN:1390277"],"termid":"MONDO:0018101","xrefs":{"Monarch":{"xref_id":"0018101"}}}


id: GO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host anion transport (obsolete GO:0044069)","synonyms":[{"name":"modification of host anion transport by symbiont","type":"exact"}],"termid":"GO:0044069"}


id: MONDO:0054802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"erythrocytosis, familial, 7","secondary_identifiers":["OMIM:617981","DOID:0111631","UMLS:C4693823","MEDGEN:1642594"],"synonyms":[{"name":"ECYT7","type":"related"},{"name":"erythrocytosis 7","type":"exact"},{"name":"erythrocytosis, Alpha-globin type","type":"related"},{"name":"erythrocytosis, FAMILIAL, 7","type":"related"},{"name":"polycythemia, Alpha-globin type","type":"related"}],"termid":"MONDO:0054802","xrefs":{"Monarch":{"xref_id":"0054802"}}}


id: PBO:0087649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing","termid":"PBO:0087649"}


id: PBO:0089729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1","termid":"PBO:0089729"}


id: FYPO:0005990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to the cell cortex of the cell tip during karyogamy involved in conjugation with cellular fusion, but does not remain there continuously.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during mating","termid":"FYPO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal maintenance of protein location in cell cortex of cell tip during karyogamy","synonyms":[{"name":"abnormal maintenance of protein localization in cell cortex of cell tip during karyogamy","type":"exact"},{"name":"abnormal maintenance of protein location in cell cortex of cell tip during karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal maintenance of protein location in cell cortex of cell tip during nuclear fusion during mating","type":"exact"},{"name":"unstable protein localisation to cell cortex of cell tip during karyogamy","type":"exact"},{"name":"unstable protein localization to cell cortex of cell tip during karyogamy","type":"exact"}],"termid":"FYPO:0005990"}


id: FYPO:0001450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to cold.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to cold","synonyms":[{"name":"increased growth during cellular response to cold","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to cold","type":"exact"},{"name":"resistance to cold during mitotic cell cycle","type":"related"},{"name":"resistance to cold during vegetative growth","type":"exact"},{"name":"resistance to low temperature","type":"exact"},{"name":"resistant to cold","type":"exact"}],"termid":"FYPO:0001450"}


id: MONDO:1010214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, non-human animal","secondary_identifiers":["OMIA:001708"],"termid":"MONDO:1010214","xrefs":{"Monarch":{"xref_id":"1010214"}}}


id: GO:0035366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"negatively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of thymine transport","synonyms":[{"name":"negative regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035366"}


id: PBO:0070173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 87 pseudogene","termid":"PBO:0070173"}


id: PBO:0028407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_biotin_import","termid":"PBO:0028407"}


id: PBO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19/Rox3","termid":"PBO:0005613"}


id: MONDO:0006100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartholin gland carcinoma (obsolete MONDO:0006100)","synonyms":[{"name":"obsolete Bartholin gland carcinoma (disease)","type":"exact"}],"termid":"MONDO:0006100","xrefs":{"Monarch":{"xref_id":"0006100"}}}


id: GO:0019238
data:
  {"annotated_genes":["SJAG_00106","SJAG_04711","SJAG_03275","SJAG_00376","SJAG_04681","SJAG_04156","SJAG_02400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[58760,60265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[70336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[76104,76935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[60036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2, in a reaction that involves the opening of a ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00376":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_04156":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0019238","terms_by_termid":{"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004477":null,"GO:0004635":null}}


id: PBO:0000344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sft1 (predicted)","termid":"PBO:0000344"}


id: MONDO:0014113
data:
  {"annotated_genes":["SJAG_02342","SJAG_01181","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85390,85391,85392],"is_not":false,"summary":null,"term":"MONDO:0014113"}]},"cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the MAP2K1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809006","OMIM:615279","DOID:0111462","GARD:15936","MEDGEN:815336"],"synonyms":[{"name":"CFC3","type":"related"},{"name":"MAP2K1 cardiofaciocutaneous syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome 3","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in MAP2K1","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 3","type":"exact"}],"termid":"MONDO:0014113","terms_by_termid":{"MONDO:0014113":null},"xrefs":{"Monarch":{"xref_id":"0014113"}}}


id: PBO:0071795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40 pseudogene 1","termid":"PBO:0071795"}


id: MOD:00496
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 125 is merged with entry 199, remap to id: MOD:00552","definition_xrefs":["Unimod:125"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00496 reductive amination-D (obsolete MOD:00496)","termid":"MOD:00496"}


id: PBO:0053625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 668","termid":"PBO:0053625"}


id: PBO:0082785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; acts as a receptor for incoming precursor proteins","termid":"PBO:0082785"}


id: GO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:pr","GOC:dph","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"negatively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006486"},{"rel_name":"regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"negative regulation of protein glycosylation","synonyms":[{"name":"negative regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060051"}


id: PR:O42707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4F6.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type lectin-like domain-containing protein C4F6.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.05c","synonyms":[{"name":"Spom972h-SPBC4F6.05c","type":"exact"}],"termid":"PR:O42707"}


id: PBO:0036149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_nitrogen_starvation","termid":"PBO:0036149"}


id: PBO:0068600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 51, pseudogene","termid":"PBO:0068600"}


id: GO:0010089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal water-conducting tissue of a vascular plant.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem development","synonyms":[{"name":"xylem histogenesis","type":"exact"}],"termid":"GO:0010089"}


id: PBO:0064850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 1","termid":"PBO:0064850"}


id: GO:0032288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"myelin assembly","synonyms":[{"name":"myelin formation","type":"related"},{"name":"myelin sheath assembly","type":"exact"}],"termid":"GO:0032288"}


id: PBO:0080821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XXYLT1 antisense RNA 2","termid":"PBO:0080821"}


id: PBO:0084941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of HER2 involved in mitochondrial translation; mutant is defective in directing meiotic recombination events to homologous chromatids","termid":"PBO:0084941"}


id: PBO:0076825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENT5C divergent transcript","termid":"PBO:0076825"}


id: PBO:0059330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5 pseudogene 4","termid":"PBO:0059330"}


id: MONDO:1011589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, cattle","secondary_identifiers":["OMIA:000817-9913"],"termid":"MONDO:1011589","xrefs":{"Monarch":{"xref_id":"1011589"}}}


id: PBO:0091152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Gon7","termid":"PBO:0091152"}


id: MONDO:0014799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the SIPA1L3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 45","secondary_identifiers":["DOID:0110262","MEDGEN:895198","UMLS:C4225182","OMIM:616851"],"synonyms":[{"name":"CTRCT45","type":"exact"},{"name":"SIPA1L3 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 45","type":"exact"},{"name":"cataract type 45","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in SIPA1L3","type":"exact"}],"termid":"MONDO:0014799","xrefs":{"Monarch":{"xref_id":"0014799"}}}


id: PBO:0088821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein Phf1","termid":"PBO:0088821"}


id: MONDO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratoconjunctivitis resulting from infection by adenoviruses.","definition_xrefs":["NCIT:C34590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"},{"relation_name":"is_a","term_name":"adenoviridae infectious disease","termid":"MONDO:0043479"},{"relation_name":"is_a","term_name":"viral conjunctivitis","termid":"MONDO:0043541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epidemic keratoconjunctivitis","secondary_identifiers":["UMLS:C0014493","DOID:13014","icd11.foundation:972253332","MEDGEN:4500","ICD9:077.1","SCTID:60548004"],"synonyms":[{"name":"EKC","type":"exact"},{"name":"shipyard eye","type":"exact"}],"termid":"MONDO:0001615","xrefs":{"Monarch":{"xref_id":"0001615"}}}


id: PBO:0052002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional cadherin 5 associated","termid":"PBO:0052002"}


id: GO:0090641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The middle layer in a microsporidian spore wall that lies under the exospore and outside the plasma membrane, containing chitin and proteins.","definition_xrefs":["PMID:19457051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"microsporidian-type endospore","termid":"GO:0090641"}


id: PBO:0012219
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium","termid":"PBO:0012219"}


id: GO:0007097
data:
  {"annotated_genes":["SJAG_02431","SJAG_04597","SJAG_04003","SJAG_03264","SJAG_02286","SJAG_02561","SJAG_03673","SJAG_02651","SJAG_02045","SJAG_01662","SJAG_02509","SJAG_00113","SJAG_00397","SJAG_01863","SJAG_05185","SJAG_04001","SJAG_00594","SJAG_00140","SJAG_04143","SJAG_00368","SJAG_03835","SJAG_04387","SJAG_01613","SJAG_02737","SJAG_01370","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104911,105241,113160],"is_not":false,"summary":null,"term":"GO:0007097"},{"annotations":[117335,91743,91352,103623,111790,101091,88106,97936,92203,95571,103330,111439,114334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[101797,111613,106964],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[71069,114336,117339,101808,109990,107801,75491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[99592,98011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[76716,99593,88110,97938,91745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94775],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus to a specific location within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nuclear migration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0040023"],"synonyms":[{"name":"establishment of cell nucleus localization","type":"related"},{"name":"establishment of localization of nucleus","type":"related"},{"name":"establishment of nucleus localisation","type":"related"},{"name":"establishment of nucleus localization","type":"related"},{"name":"establishment of position of nucleus","type":"exact"},{"name":"nuclear movement","type":"exact"},{"name":"nuclear positioning","type":"exact"},{"name":"nucleus migration","type":"exact"},{"name":"nucleus positioning","type":"exact"},{"name":"positioning of nucleus","type":"exact"}],"termid":"GO:0007097","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null}}


id: PBO:0089628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase","termid":"PBO:0089628"}


id: GO:0005581
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures.","definition_xrefs":["PMID:21421911","GOC:mah","PMID:19693541","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen trimer","secondary_identifiers":["Wikipedia:Collagen"],"termid":"GO:0005581"}


id: FYPO:0000270
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119909,119921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to osmotic stress","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"hypersensitive to osmotic stress","type":"exact"},{"name":"osmotic stress resistance: decreased","type":"related"},{"name":"sensitive to osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000270","terms_by_termid":{"FYECO:0000207":null,"FYPO:0000271":null,"FYPO_EXT:0000001":null}}


id: PBO:0065614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A2","termid":"PBO:0065614"}


id: PBO:0053457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 410","termid":"PBO:0053457"}


id: FYPO:0006895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell tip is decreased during one or both meiotic nuclear divisions.","definition_xrefs":["PMID:30649994","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cell tip during meiosis","synonyms":[{"name":"decreased protein localisation to cell tip during meiosis","type":"exact"},{"name":"decreased protein localization to cell end during meiosis","type":"exact"},{"name":"decreased protein localization to cell tip during meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to cell tip during meiosis","type":"exact"}],"termid":"FYPO:0006895"}


id: GO:0110032
data:
  {"annotated_genes":["SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73912],"is_not":false,"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to MI phase of the meiotic cell cycle.","definition_xrefs":["GOC:vw","PMID:25492408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110030"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle phase transition","termid":"GO:1901995"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle G2/M phase transition","termid":"GO:1902751"},{"relation_name":"positively_regulates","term_name":"G2/MI transition of meiotic cell cycle","termid":"GO:0008315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G2/MI transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0110032","terms_by_termid":{"GO:0110032":null}}


id: PBO:0043010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase 1","termid":"PBO:0043010"}


id: MONDO:0011464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 11 (SCA11) is a subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by the early-onset of cerebellar signs, eye movement abnormalities and pyramidal signs.","definition_xrefs":["Orphanet:98767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 11","secondary_identifiers":["UMLS:C1858351","MEDGEN:346799","MESH:C565772","OMIM:604432","GARD:10475","SCTID:719207000","icd11.foundation:743674840","DOID:0050961"],"synonyms":[{"name":"SCA11","type":"exact"},{"name":"spinocerebellar ataxia 11","type":"related"},{"name":"spinocerebellar ataxia type 11","type":"exact"}],"termid":"MONDO:0011464","xrefs":{"Monarch":{"xref_id":"0011464"}}}


id: GO:1903556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"down regulation of TNF superfamily production","type":"related"},{"name":"down regulation of TNFSF cytokine production","type":"exact"},{"name":"down regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"down-regulation of TNF superfamily production","type":"related"},{"name":"down-regulation of TNFSF cytokine production","type":"exact"},{"name":"down-regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"downregulation of TNF superfamily production","type":"related"},{"name":"downregulation of TNFSF cytokine production","type":"exact"},{"name":"downregulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"inhibition of TNF superfamily production","type":"related"},{"name":"inhibition of TNFSF cytokine production","type":"narrow"},{"name":"inhibition of tumor necrosis factor superfamily cytokine production","type":"narrow"},{"name":"negative regulation of TNF superfamily production","type":"related"},{"name":"negative regulation of TNFSF cytokine production","type":"exact"}],"termid":"GO:1903556"}


id: PBO:0013057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudokinase Tea5","termid":"PBO:0013057"}


id: MONDO:0800274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 5","secondary_identifiers":["MEDGEN:369911","UMLS:C1969031"],"synonyms":[{"name":"AIS5","type":"exact"}],"termid":"MONDO:0800274","xrefs":{"Monarch":{"xref_id":"0800274"}}}


id: PBO:0011515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose specific flocculin Gsf2","termid":"PBO:0011515"}


id: GO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot development.","definition_xrefs":["PMID:16361392","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system development","synonyms":[{"name":"regulation of shoot development","type":"exact"}],"termid":"GO:0048831"}


id: PBO:0045123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D binding myb like transcription factor 1","termid":"PBO:0045123"}


id: MONDO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyshormonogenic goiter","secondary_identifiers":["SCTID:190304001","DOID:12175","ICD9:246.1","MEDGEN:508873","UMLS:C0152077"],"termid":"MONDO:0001460","xrefs":{"Monarch":{"xref_id":"0001460"}}}


id: PR:O42851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23A1.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized trans-sulfuration enzyme C23A1.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.14c","synonyms":[{"name":"Spom972h-SPAC23A1.14c","type":"exact"}],"termid":"PR:O42851"}


id: FYPO:0004615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during interphase of the mitotic cell cycle in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a cytoplasmic microtubule, occurs at a higher rate, or speed, than normal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"increased rate of mitotic interphase microtubule polymerization","synonyms":[{"name":"increased interphase microtubule plus end growth rate","type":"exact"},{"name":"increased interphase microtubule polymerization rate","type":"exact"},{"name":"increased rate of cytoplasmic microtubule polymerization during mitotic interphase","type":"exact"},{"name":"increased rate of interphase cytoplasmic microtubule polymerization","type":"exact"},{"name":"increased rate of interphase microtubule growth","type":"exact"},{"name":"increased rate of interphase microtubule polymerisation","type":"exact"},{"name":"increased rate of interphase microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"increased rate of interphase microtubule polymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0004615"}


id: GO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in heart valve morphogenesis","synonyms":[{"name":"apoptosis involved in heart valve morphogenesis","type":"narrow"}],"termid":"GO:0003276"}


id: GO:0000266
data:
  {"annotated_genes":["SJAG_04203","SJAG_01212","SJAG_05261","SJAG_03464","SJAG_01594","SJAG_04732","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67015,99616],"is_not":false,"summary":null,"term":"GO:0000266"},{"annotations":[102867,103129,95335],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090149"},{"annotations":[116695],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090258"},{"annotations":[109262],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["PMID:11038192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_01594":null,"SJAG_02848":null,"SJAG_03464":null,"SJAG_04203":null,"SJAG_04732":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial fission","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial division","type":"exact"},{"name":"mitochondrial proliferation","type":"related"}],"termid":"GO:0000266","terms_by_termid":{"GO:0000266":null,"GO:0090141":null,"GO:0090149":null,"GO:0090258":null}}


id: GO:0060314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"}


id: MONDO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the PALB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0021190","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group N","secondary_identifiers":["GARD:15500","OMIM:610832","UMLS:C1835817","MEDGEN:372133","DOID:0111094","MESH:C563657"],"synonyms":[{"name":"FANCN","type":"exact"},{"name":"Fanconi Anemia, complementation group type N","type":"exact"},{"name":"Fanconi anaemia caused by mutation in PALB2","type":"exact"},{"name":"Fanconi anaemia complementation group type N","type":"exact"},{"name":"Fanconi anemia caused by mutation in PALB2","type":"exact"},{"name":"Fanconi anemia complementation group N","type":"exact"},{"name":"Fanconi anemia complementation group type N","type":"exact"},{"name":"Fanconi anemia, complementation group N","type":"related"},{"name":"PALB2 Fanconi anaemia","type":"exact"},{"name":"PALB2 Fanconi anemia","type":"exact"}],"termid":"MONDO:0012565","xrefs":{"Monarch":{"xref_id":"0012565"}}}


id: FYECO:0000015
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119506,119507,119500,119503],"is_not":false,"summary":null,"term":"FYECO:0000015"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium promoting mating and sporulation.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"sporulation medium","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"SPA medium","type":"narrow"},{"name":"malt extract medium","type":"narrow"},{"name":"mating medium","type":"related"}],"termid":"FYECO:0000015","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000015":null}}


id: MONDO:0007093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the DLX3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypomaturation-hypoplastic amelogenesis imperfecta with taurodontism","secondary_identifiers":["MEDGEN:350816","DOID:0110053","MESH:C566293","GARD:16932","Orphanet:100034","UMLS:C1863012","OMIM:104510"],"synonyms":[{"name":"AI4","type":"exact"},{"name":"AIHHT","type":"exact"},{"name":"DLX3 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in DLX3","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation-hypoplastic type with taurodontism","type":"exact"},{"name":"amelogenesis imperfecta type 4","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation-hypoplastic type, with taurodontism","type":"related"},{"name":"amelogenesis imperfecta, type 4","type":"related"},{"name":"amelogenesis imperfecta, type IV","type":"related"}],"termid":"MONDO:0007093","xrefs":{"Monarch":{"xref_id":"0007093"}}}


id: GO:0009793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryo development","termid":"GO:0009790"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo development ending in seed dormancy","synonyms":[{"name":"embryogenesis","type":"broad"}],"termid":"GO:0009793"}


id: GO:0042639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resting phase of hair cycle.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telogen","synonyms":[{"name":"hair resting phase","type":"narrow"}],"termid":"GO:0042639"}


id: GO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of complement activation, lectin pathway in another organism (obsolete GO:0044641)","synonyms":[{"name":"envenomation resulting in positive regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044641"}


id: GO:0009695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of jasmonic acid, a fatty acid derivative.","definition_xrefs":["PMID:33821356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jasmonic acid metabolic process","termid":"GO:0009694"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"jasmonic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-735"],"synonyms":[{"name":"jasmonic acid anabolism","type":"exact"},{"name":"jasmonic acid biosynthesis","type":"exact"},{"name":"jasmonic acid formation","type":"exact"},{"name":"jasmonic acid synthesis","type":"exact"}],"termid":"GO:0009695"}


id: MONDO:0012215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, late adult-onset myofibrillar myopathy characterized by progressive distal muscle weakness associated with peripheral neuropathy and hyporeflexia. Ambulation may be lost within a few years.","definition_xrefs":["Orphanet:98911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"},{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"myofibrillar myopathy 3","secondary_identifiers":["MEDGEN:811509","MESH:C535906","OMIM:182920","DOID:0080094","Orphanet:268129","SCTID:719985001","GARD:16871","MESH:C563775","OMIM:159000","SCTID:765092004","UMLS:C3714934","DOID:0110300","Orphanet:266","OMIM:609200","SCTID:765196004","MESH:C000598645"],"synonyms":[{"name":"LGMD1","type":"related"},{"name":"LGMD1A","type":"exact"},{"name":"MFM3","type":"related"},{"name":"MYOT autosomal dominant distal myopathy","type":"exact"},{"name":"MYOT autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal dominant distal myopathy caused by mutation in MYOT","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in MYOT","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy type 1A","type":"exact"},{"name":"autosomal dominant spheroid body myopathy","type":"related"},{"name":"distal myotilinopathy","type":"exact"},{"name":"limb-girdle muscular dystrophy due to myotilin deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 1A","type":"related"},{"name":"muscular dystrophy limb-girdle type 1A","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 1A","type":"related"},{"name":"muscular dystrophy, proximal, type 1A","type":"related"},{"name":"myofibrillar myopathy type 3","type":"exact"},{"name":"myopathy, myofibrillar, 3","type":"related"},{"name":"myopathy, myofibrillar, myotilin-related","type":"related"},{"name":"myopathy, myofibrillar, type 3","type":"exact"},{"name":"myopathy, spheroid body","type":"related"},{"name":"myotilinopathy","type":"exact"},{"name":"proximal muscular dystrophy type 1A","type":"exact"},{"name":"spheroid body myopathy","type":"exact"}],"termid":"MONDO:0012215","xrefs":{"Monarch":{"xref_id":"0012215"}}}


id: PBO:0091276
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type Cyclin Pombe","termid":"PBO:0091276"}


id: PBO:0078468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-6","termid":"PBO:0078468"}


id: PATO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being not curled or wound (especially in concentric rings or spirals).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coiling","termid":"PATO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncoiled","termid":"PATO:0000415"}


id: PBO:0079545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA6 divergent transcript","termid":"PBO:0079545"}


id: PBO:0057220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378h","termid":"PBO:0057220"}


id: GO:0002054
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to a nucleobase, any of a class of pyrmidines or purines, organic nitrogenous bases.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nucleobase binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0002054","terms_by_termid":{"GO:0002055":null}}


id: GO:0060992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fungicide stimulus. Fungicides are chemicals used to kill fungi.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"},{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fungicide","termid":"GO:0060992"}


id: PBO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Hri1","termid":"PBO:0002703"}


id: PBO:0081822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 740","termid":"PBO:0081822"}


id: MONDO:0031037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare evolutive vascular malformation disorder characterized by closely clustered irregular dilated capillaries that can be asymptomatic or that can cause variable neurological manifestations such as seizures, non-specific headaches, progressive or transient focal neurologic deficits, and/or cerebral hemorrhages.","definition_xrefs":["Orphanet:221061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cavernous malformation","termid":"MONDO:0000820"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"famililal cerebral cavernous malformations","secondary_identifiers":["UMLS:C2931263","SCTID:717003001","OMIMPS:116860","MEDGEN:419031","GARD:13641"],"synonyms":[{"name":"CCM","type":"related"},{"name":"cavernous angioma, familial","type":"related"},{"name":"cavernous angiomatous malformations","type":"related"},{"name":"cavernous malformations of CNS and retina","type":"related"},{"name":"cerebral capillary malformations","type":"related"},{"name":"cerebral cavernous malformations","type":"related"},{"name":"familial brain cavernous angioma","type":"exact"},{"name":"familial brain cavernous hemangioma","type":"exact"},{"name":"familial cerebral cavernoma","type":"exact"},{"name":"familial cerebral cavernous malformation","type":"exact"},{"name":"famililal cerebral cavernous malformations","type":"exact"},{"name":"hereditary brain cavernous angioma","type":"exact"},{"name":"hereditary brain cavernous hemangioma","type":"exact"},{"name":"hereditary cerebral cavernoma","type":"exact"},{"name":"hereditary cerebral cavernous malformation","type":"exact"},{"name":"hyperkeratotic cutaneous capillary-Venous malformations associated with cerebral capillary malformations","type":"related"}],"termid":"MONDO:0031037","xrefs":{"Monarch":{"xref_id":"0031037"}}}


id: MONDO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the sphenoorbital region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoorbital meningioma","secondary_identifiers":["MEDGEN:233458","UMLS:C1336040","DOID:7819","NCIT:C5285"],"termid":"MONDO:0004368","xrefs":{"Monarch":{"xref_id":"0004368"}}}


id: GO:0019491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["GOC:jl","PMID:11823218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectoine metabolic process","termid":"GO:0042399"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ectoine biosynthetic process","secondary_identifiers":["MetaCyc:P101-PWY"],"synonyms":[{"name":"ectoine anabolism","type":"exact"},{"name":"ectoine biosynthesis","type":"exact"},{"name":"ectoine formation","type":"exact"},{"name":"ectoine synthesis","type":"exact"}],"termid":"GO:0019491"}


id: MONDO:0015890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with congenital hypogonadotropic hypogonadism (obsolete MONDO:0015890)","secondary_identifiers":["Orphanet:181387"],"synonyms":[{"name":"rare disorder with hypogonadotropic hypogonadism","type":"related"},{"name":"rare disorder with secondary hypogonadism","type":"exact"}],"termid":"MONDO:0015890","xrefs":{"Monarch":{"xref_id":"0015890"}}}


id: PBO:0043238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel Kb","termid":"PBO:0043238"}


id: GO:0051382
data:
  {"annotated_genes":["SJAG_02465","SJAG_04177","SJAG_02513","SJAG_00718","SJAG_04638","SJAG_03217","SJAG_02664","SJAG_01837","SJAG_03220","SJAG_05321","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57133,64649,66379,66988,80181,91136,105848],"is_not":false,"summary":null,"term":"GO:0051382"},{"annotations":[118341],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[102737,117068,90007],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetochore organization","termid":"GO:0051383"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"centromere complex assembly","termid":"GO:0034508"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_04177":null,"SJAG_04638":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"kinetochore assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044768","GO:0000069"],"synonyms":[{"name":"NMS complex assembly","type":"narrow"},{"name":"centromere and kinetochore complex maturation","type":"narrow"},{"name":"centromere/kinetochore complex maturation","type":"narrow"},{"name":"chromosome-kinetochore attachment","type":"narrow"},{"name":"kinetochore formation","type":"related"}],"termid":"GO:0051382","terms_by_termid":{"GO:0051382":null,"GO:1905560":null,"GO:1905561":null}}


id: PBO:0060213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate diphosphate decarboxylase","termid":"PBO:0060213"}


id: GO:1905140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18359901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apical ectodermal ridge formation","synonyms":[{"name":"regulation of AER formation","type":"related"},{"name":"regulation of apical epidermal ridge formation","type":"exact"},{"name":"regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905140"}


id: PBO:0071867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 5","termid":"PBO:0071867"}


id: PBO:0039199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 2","termid":"PBO:0039199"}


id: MONDO:0005825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious bacterial infection caused by spirochetes of the genus Leptospira. Humans are infected by contact with water and soil which have been contaminated with animal waste products. The signs and symptoms include an initial flu-like phase, followed by a second phase in which patients may develop meningitis, liver failure and renal failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"spirochaetales infections","termid":"MONDO:0021839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptospirosis","secondary_identifiers":["MESH:D007922","DOID:2297","EFO:0007344","ICD9:100.89","Orphanet:509","ICD9:100","ICD9:100.0","MedDRA:10024238","UMLS:C0023364","icd11.foundation:751399056","ICD9:100.9","MEDGEN:7309","ICD10CM:A27","GARD:7881","NCIT:C84825","SCTID:77377001"],"synonyms":[{"name":"Icterohemorrhagic fever","type":"related"},{"name":"Leptospira caused disease or disorder","type":"exact"},{"name":"Leptospira disease or disorder","type":"exact"},{"name":"Leptospira infectious disease","type":"exact"},{"name":"Queensland fever","type":"related"},{"name":"Stuttgart disease","type":"related"},{"name":"Weil disease","type":"related"},{"name":"cane cutter's fever","type":"related"},{"name":"cane-cutter fever","type":"related"},{"name":"canicola fever","type":"related"},{"name":"fort Bragg fever","type":"exact"},{"name":"harvest fever","type":"related"},{"name":"hemorrhagic jaundice","type":"related"},{"name":"infection due to Leptospira","type":"related"},{"name":"japanese autumnal fever","type":"related"},{"name":"leptospirosis","type":"exact"},{"name":"leptospirosis icterohaemorrhagica","type":"exact"},{"name":"mud fever","type":"related"},{"name":"nanukayami fever","type":"exact"},{"name":"rat catcher's yellows","type":"exact"},{"name":"rice-field fever","type":"related"},{"name":"rice-field worker's disease","type":"related"},{"name":"seven day fever","type":"related"},{"name":"spirochetal jaundice","type":"exact"},{"name":"swamp fever","type":"related"},{"name":"swineherd's disease","type":"related"}],"termid":"MONDO:0005825","xrefs":{"Monarch":{"xref_id":"0005825"}}}


id: PBO:0072237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 12","termid":"PBO:0072237"}


id: PBO:0075039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-2","termid":"PBO:0075039"}


id: MONDO:0015532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"generalized eruptive histiocytosis","secondary_identifiers":["UMLS:C0347404","Orphanet:157991","GARD:20018","SCTID:110980006","MEDGEN:578001"],"synonyms":[{"name":"generalised eruptive histiocytoma","type":"exact"},{"name":"generalized eruptive histiocytoma","type":"exact"}],"termid":"MONDO:0015532","xrefs":{"Monarch":{"xref_id":"0015532"}}}


id: PBO:0091771
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CeNTaurin b5-like gene","termid":"PBO:0091771"}


id: PBO:0073512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 5","termid":"PBO:0073512"}


id: GO:1905332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GOC:bhm","PMID:25745997","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"positively_regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of morphogenesis of an epithelium","synonyms":[{"name":"activation of epithelium morphogenesis","type":"narrow"},{"name":"activation of morphogenesis of an epithelium","type":"narrow"},{"name":"positive regulation of epithelium morphogenesis","type":"exact"},{"name":"up regulation of epithelium morphogenesis","type":"exact"},{"name":"up regulation of morphogenesis of an epithelium","type":"exact"},{"name":"up-regulation of epithelium morphogenesis","type":"exact"},{"name":"up-regulation of morphogenesis of an epithelium","type":"exact"},{"name":"upregulation of epithelium morphogenesis","type":"exact"},{"name":"upregulation of morphogenesis of an epithelium","type":"exact"}],"termid":"GO:1905332"}


id: GO:0035122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the medial fin are generated and organized. Medial fins are unpaired fins of fish, usually located dorsomedially or ventromedially and primarily used for stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic medial fin morphogenesis","synonyms":[{"name":"embryonic unpaired fin morphogenesis","type":"exact"}],"termid":"GO:0035122"}


id: GO:1990632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the submandibular gland is generated and organized.","definition_xrefs":["PMID:15063181","PMID:20890964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in submandibular gland morphogenesis","synonyms":[{"name":"submandibular gland branching morphogenesis","type":"exact"},{"name":"submandibular gland ductal branching","type":"exact"}],"termid":"GO:1990632"}


id: PBO:0085394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane Na+/Pi cotransporter; active in early growth phase; similar to phosphate transporters of Neurospora crassa; transcription regulated by inorganic phosphate concentrations and Pho4p; mutations in related human transporter genes hPit1 and hPit2 are associated with hyperphosphatemia-induced calcification of vascular tissue and familial idiopathic basal ganglia calcification","termid":"PBO:0085394"}


id: PBO:0054596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1999","termid":"PBO:0054596"}


id: PR:Q09811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rqh1 gene.","definition_xrefs":["UniProtKB:Q09811","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase hus2/rqh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.12","synonyms":[{"name":"Spom972h-rqh1","type":"exact"}],"termid":"PR:Q09811"}


id: MONDO:0100553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any open angle glaucoma in which the cause of the disease is a mutation in the OPTN gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"OPTN-related open angle glaucoma","secondary_identifiers":["OMIM:137760","UMLS:C0339573","MEDGEN:87389"],"synonyms":[{"name":"OPTN-related open angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, E","type":"exact"}],"termid":"MONDO:0100553","xrefs":{"Monarch":{"xref_id":"0100553"}}}


id: GO:0048919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast development","termid":"GO:0048884"},{"relation_name":"part_of","term_name":"posterior lateral line development","termid":"GO:0048916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast development","termid":"GO:0048919"}


id: MONDO:0013827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hyperekplexia in which the cause of the disease is a mutation in the SLC6A5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperekplexia 3","secondary_identifiers":["DOID:0060698","GARD:15825","UMLS:C3553288","OMIM:614618","MEDGEN:766202"],"synonyms":[{"name":"HKPX3","type":"exact"},{"name":"SLC6A5 hereditary hyperekplexia","type":"exact"},{"name":"hereditary hyperekplexia caused by mutation in SLC6A5","type":"exact"},{"name":"hyperekplexia 3","type":"exact"},{"name":"hyperekplexia type 3","type":"exact"}],"termid":"MONDO:0013827","xrefs":{"Monarch":{"xref_id":"0013827"}}}


id: PBO:0114288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome mebbrane ubiquitin conjugating enzyme E2 Ubc16 Pex4","termid":"PBO:0114288"}


id: PBO:0050502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 2","termid":"PBO:0050502"}


id: PBO:0036406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Met7 (predicted)","termid":"PBO:0036406"}


id: PBO:0084864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria","termid":"PBO:0084864"}


id: PR:O94700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endothelial differentiation-related factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02913","PANTHER:PTHR10245:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein-bridging factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.17","secondary_identifiers":["UniProtKB:O94700"],"synonyms":[{"name":"Spom972h-EDF1","type":"exact"}],"termid":"PR:O94700"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: PBO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 18","termid":"PBO:0045828"}


id: PBO:0061765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 1","termid":"PBO:0061765"}


id: MONDO:0018662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachyolmia, recessive type is a form of brachyolmia, a group of rare genetic skeletal disorders, characterized by short-trunked short stature with platyspondyly and scoliosis. Corneal opacities and precocious calcification of the costal cartilage are rare syndromic components. Premature pubarche may occur.","definition_xrefs":["Orphanet:448242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"brachyolmia","termid":"MONDO:0015262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive brachyolmia","secondary_identifiers":["icd11.foundation:625421044","UMLS:C4760908","MEDGEN:1675807","GARD:13171"],"synonyms":[{"name":"brachyolmia, Hobaek/Toledo type","type":"exact"},{"name":"brachyolmia, autosomal recessive","type":"exact"}],"termid":"MONDO:0018662","xrefs":{"Monarch":{"xref_id":"0018662"}}}


id: MONDO:0060611
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85476,85477],"is_not":false,"summary":null,"term":"MONDO:0060611"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"is_obsolete":false,"name":"combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617780","Orphanet:658813","MEDGEN:1615364","UMLS:C4540434"],"synonyms":[{"name":"CIMAH","type":"related"},{"name":"combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia","type":"exact"},{"name":"methylenetetrahydrofolate dehydrogenase 1 deficiency","type":"related"}],"termid":"MONDO:0060611","terms_by_termid":{"MONDO:0060611":null},"xrefs":{"Monarch":{"xref_id":"0060611"}}}


id: PBO:0048359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 70","termid":"PBO:0048359"}


id: MONDO:1011087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, dog","secondary_identifiers":["OMIA:001135-9615"],"termid":"MONDO:1011087","xrefs":{"Monarch":{"xref_id":"1011087"}}}


id: PBO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.87","termid":"PBO:0000989"}


id: PBO:0049742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin binding EGF like growth factor","termid":"PBO:0049742"}


id: PBO:0054418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1814","termid":"PBO:0054418"}


id: PBO:0042945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 1","termid":"PBO:0042945"}


id: PBO:0038870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 1","termid":"PBO:0038870"}


id: GO:0042667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an auditory hair cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"auditory receptor cell fate commitment","termid":"GO:0009912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate specification","synonyms":[{"name":"auditory hair cell fate specification","type":"exact"}],"termid":"GO:0042667"}


id: FYPO:0003718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tributyltin. Cells stop growing (and may die) at a concentration of tributyltin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tributyltin","synonyms":[{"name":"hypersensitive to tributyltin","type":"exact"},{"name":"sensitive to tributylstannane","type":"exact"},{"name":"sensitive to tributyltin during mitotic cell cycle","type":"related"},{"name":"sensitive to tributyltin during vegetative growth","type":"exact"}],"termid":"FYPO:0003718"}


id: PBO:0050758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 20","termid":"PBO:0050758"}


id: PBO:0049644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 47","termid":"PBO:0049644"}


id: GO:0015295
data:
  {"annotated_genes":["SJAG_03820","SJAG_00057","SJAG_02779","SJAG_04673","SJAG_01406","SJAG_03960","SJAG_03595","SJAG_04068","SJAG_03606","SJAG_02780","SJAG_03608","SJAG_04506","SJAG_04905","SJAG_02958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72181,79605],"is_not":false,"summary":null,"term":"GO:0015295"},{"annotations":[75189,76726,73573,71311,73436,73593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[117605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[101042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[102021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[96129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[72473,73410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[102024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[75936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(out) = solute(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"solute:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"},{"name":"heavy metal ion:hydrogen symporter activity","type":"narrow"},{"name":"high affinity metal ion uptake transporter activity","type":"narrow"},{"name":"low affinity metal ion uptake transporter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"},{"name":"solute:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015295","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0034216":null,"GO:0097434":null}}


id: MONDO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process of the gingival tissues and/or periodontal membrane of the teeth, resulting in an abnormally deep gingival sulcus, possibly producing periodontal pockets and loss of alveolar bone support.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodontal disorder","secondary_identifiers":["ICD9:523.8","DOID:3388","MESH:D010510","NCIT:C63743","SCTID:2556008","UMLS:C0031090","MEDGEN:10658"],"synonyms":[{"name":"disease of periodontium","type":"exact"},{"name":"disease of supporting structures of teeth","type":"exact"},{"name":"disease or disorder of periodontium","type":"exact"},{"name":"disorder of periodontium","type":"exact"},{"name":"periodontal disease","type":"exact"},{"name":"periodontal disorder","type":"exact"},{"name":"periodontium disease","type":"exact"},{"name":"periodontium disease or disorder","type":"exact"},{"name":"periodontium disorder","type":"exact"}],"termid":"MONDO:0002635","xrefs":{"Monarch":{"xref_id":"0002635"}}}


id: FYPO:0005907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to heat","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to heat","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0005907"}


id: PBO:0040584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BABAM2 antisense RNA 1","termid":"PBO:0040584"}


id: PBO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bfr1 binding protein ortholog Sos7","termid":"PBO:0000882"}


id: GO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:ef","GOC:dph","GOC:mah","GOC:tb","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031450"}


id: GO:0009808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignin metabolic process","synonyms":[{"name":"lignin metabolism","type":"exact"}],"termid":"GO:0009808"}


id: PBO:0082513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex; uses the cofactor acetyl coenzyme A to acetylate free nuclear and cytoplasmic histone H4; involved in telomeric silencing and DNA double-strand break repair","termid":"PBO:0082513"}


id: MONDO:0015513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A form of endocrine system disease that is both rare and inborn.","definition_xrefs":["MONDO:patterns/rare_genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare genetic endocrine disease (obsolete MONDO:0015513)","secondary_identifiers":["Orphanet:156638"],"synonyms":[{"name":"rare genetic endocrine system disease","type":"exact"}],"termid":"MONDO:0015513","xrefs":{"Monarch":{"xref_id":"0015513"}}}


id: PBO:0027454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_triphosphatase_activity","termid":"PBO:0027454"}


id: MONDO:0005836
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87674,87673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the male reproductive system. Representative examples include prostate carcinoma, penile carcinoma, testicular seminoma, and testicular embryonal carcinoma.","definition_xrefs":["NCIT:C8561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"male reproductive organ cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:102279","SCTID:363515000","DOID:3856","UMLS:C0153606","MESH:D005834","ICD9:187.8","EFO:0007355","ICD9:187.9"],"synonyms":[{"name":"cancer of male reproductive organ","type":"exact"},{"name":"male genital cancer","type":"exact"},{"name":"male genital neoplasm","type":"broad"},{"name":"male reproductive organ cancer","type":"exact"},{"name":"male reproductive system neoplasm","type":"broad"},{"name":"malignant Male reproductive system neoplasm","type":"exact"},{"name":"malignant Male reproductive system tumor","type":"exact"},{"name":"malignant Male reproductive system tumour","type":"exact"},{"name":"malignant male reproductive organ neoplasm","type":"exact"},{"name":"malignant neoplasm of Male reproductive system","type":"exact"},{"name":"malignant neoplasm of male genital organ","type":"exact"},{"name":"malignant neoplasm of male genital organ or tract","type":"exact"},{"name":"malignant neoplasm of male genital organ, site unspecified","type":"exact"},{"name":"malignant neoplasm of male genital organs","type":"exact"},{"name":"malignant neoplasm of male reproductive organ","type":"exact"},{"name":"malignant neoplasm of the Male reproductive system","type":"exact"},{"name":"malignant tumor of Male reproductive system","type":"exact"},{"name":"malignant tumor of male genital organ","type":"exact"},{"name":"malignant tumor of male reproductive system","type":"exact"},{"name":"malignant tumor of the Male reproductive system","type":"exact"},{"name":"malignant tumour of Male reproductive system","type":"exact"},{"name":"malignant tumour of male genital organ","type":"exact"},{"name":"malignant tumour of male reproductive system","type":"exact"},{"name":"malignant tumour of the Male reproductive system","type":"exact"},{"name":"neoplasm of male genital organ","type":"broad"},{"name":"tumor of male reproductive system","type":"broad"},{"name":"tumour of male reproductive system","type":"broad"}],"termid":"MONDO:0005836","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0005836"}}}


id: MONDO:0012797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 8","secondary_identifiers":["UMLS:C2677515","MESH:C567421","OMIM:612096","DOID:0060926","MEDGEN:436965"],"synonyms":[{"name":"OTSC8","type":"exact"},{"name":"otosclerosis 8","type":"exact"}],"termid":"MONDO:0012797","xrefs":{"Monarch":{"xref_id":"0012797"}}}


id: PBO:0083975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible alcohol dehydrogenase II; catalyzes the conversion of ethanol to acetaldehyde; involved in the production of certain carboxylate esters; regulated by ADR1","termid":"PBO:0083975"}


id: GO:0010102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a lateral root are generated and organized. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic root morphogenesis","termid":"GO:0010101"},{"relation_name":"part_of","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root morphogenesis","termid":"GO:0010102"}


id: PBO:0070783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 13","termid":"PBO:0070783"}


id: GO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to actinin, any member of a family of proteins that crosslink F-actin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"actinin binding","secondary_identifiers":["GO:0051406"],"synonyms":[{"name":"beta-actinin binding","type":"narrow"},{"name":"capZ binding","type":"exact"}],"termid":"GO:0042805"}


id: GO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds, acting as an aminopeptidase (notably, cleaving Arg-Xaa bonds) as well as an endopeptidase.","definition_xrefs":["EC:3.4.22.16"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin H activity (obsolete GO:0004215)","synonyms":[{"name":"N-benzoylarginine-beta-naphthylamide hydrolase activity","type":"related"},{"name":"aleurain activity","type":"related"},{"name":"benzoylarginine-naphthylamide (BANA) hydrolase activity","type":"related"},{"name":"cathepsin B3 activity","type":"related"},{"name":"cathepsin BA activity","type":"related"},{"name":"cathepsin Ba","type":"related"},{"name":"cathepsin H activity","type":"exact"}],"termid":"GO:0004215"}


id: PR:O14031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pgt1 gene.","definition_xrefs":["UniProtKB:O14031","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.10c","synonyms":[{"name":"Spom972h-pgt1","type":"exact"}],"termid":"PR:O14031"}


id: PBO:0079885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 2","termid":"PBO:0079885"}


id: PBO:0045440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like 4","termid":"PBO:0045440"}


id: FYPO:0001636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular glutamine level","synonyms":[{"name":"normal cellular L-glutamine level","type":"exact"},{"name":"normal cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutamine level during vegetative growth","type":"exact"},{"name":"normal level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001636"}


id: PR:Q09794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAD protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ura1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.06c","secondary_identifiers":["UniProtKB:Q09794"],"synonyms":[{"name":"Spom972h-CAD","type":"exact"}],"termid":"PR:Q09794"}


id: MONDO:0015013
data:
  {"annotated_genes":["SJAG_03795"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87193],"is_not":false,"summary":null,"term":"MONDO:0015013"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the REEP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03795":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 77","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080350","OMIM:617304","UMLS:C4310626","MEDGEN:934593","GARD:16221"],"synonyms":[{"name":"REEP6 retinitis pigmentosa","type":"exact"},{"name":"RP77","type":"related"},{"name":"retinitis pigmentosa 77","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in REEP6","type":"exact"},{"name":"retinitis pigmentosa type 77","type":"exact"}],"termid":"MONDO:0015013","terms_by_termid":{"MONDO:0015013":null},"xrefs":{"Monarch":{"xref_id":"0015013"}}}


id: GO:0033735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + H2O + NAD(P)+ = oxaloacetate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aspartate dehydrogenase activity","secondary_identifiers":["GO:0106351","KEGG_REACTION:R07165","MetaCyc:1.4.1.21-RXN","KEGG_REACTION:R07164","GO:0106352"],"synonyms":[{"name":"L-aspartate:NAD(P)+ oxidoreductase (deaminating) activity","type":"related"},{"name":"NAD-dependent aspartate dehydrogenase activity","type":"related"},{"name":"NADH2-dependent aspartate dehydrogenase activity","type":"related"},{"name":"NADP+-dependent aspartate dehydrogenase activity","type":"related"},{"name":"aspartate dehydrogenase NAD activity","type":"narrow"},{"name":"aspartate dehydrogenase NADP activity","type":"narrow"}],"termid":"GO:0033735"}


id: MONDO:0020291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplastic right-heart syndrome (HRHS) is a rare, cyanotic congenital heart malformation caused by underdevelopment of the right-sided heart structures (tricuspid valve, RV, pulmonary valve, and pulmonary artery) commonly associated with an atrial septal defect, ostium secundum type. Pulmonary blood flow is diminished and right-to-left shunting occurs at the atrial level, leading to dyspnea, fatigue, atrial arrhythmias, right-sided heart failure, hypoxemia, repeated miscarriages that were mostly due to hypoxemia and cyanosis. Two subtypes of HRHS have been characterized: pulmonary atresia-intact ventricular septum and right ventricular hypoplasia.","definition_xrefs":["Orphanet:98723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"univentricular cardiopathy","termid":"MONDO:0019820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic right heart syndrome","secondary_identifiers":["NCIT:C99053","SCTID:268180007","UMLS:C0344963","DOID:0070315","ICD9:746.89","MedDRA:10064962","MedDRA:10050053","GARD:2922","MEDGEN:83376","ICD10CM:Q22.6"],"synonyms":[{"name":"right hypoplastic heart syndrome","type":"exact"}],"termid":"MONDO:0020291","xrefs":{"Monarch":{"xref_id":"0020291"}}}


id: GO:0016139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"glycosyl compound catabolic process","termid":"GO:1901658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside catabolic process","secondary_identifiers":["GO:0016142"],"synonyms":[{"name":"O-glycoside breakdown","type":"exact"},{"name":"O-glycoside catabolic process","type":"exact"},{"name":"O-glycoside catabolism","type":"exact"},{"name":"O-glycoside degradation","type":"exact"},{"name":"glycoside breakdown","type":"exact"},{"name":"glycoside catabolism","type":"exact"},{"name":"glycoside degradation","type":"exact"}],"termid":"GO:0016139"}


id: MONDO:0015223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare anemia.","gene_count":0,"genotype_count":0,"name":"obsolete rare anemia (obsolete MONDO:0015223)","secondary_identifiers":["Orphanet:108997"],"synonyms":[{"name":"rare anemia","type":"exact"},{"name":"rare anemia (disease)","type":"exact"}],"termid":"MONDO:0015223","xrefs":{"Monarch":{"xref_id":"0015223"}}}


id: PBO:0045668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNAP pseuodgene 3","termid":"PBO:0045668"}


id: PBO:0068887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 128, pseudogene","termid":"PBO:0068887"}


id: PBO:0079802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B17","termid":"PBO:0079802"}


id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: MONDO:0700046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Withdrawal syndrome involving the abrupt discontinuation of baclofen therapy (intrathecal or oral). Baclofen withdrawal syndrome can result in high fever, altered mental status (including agitation, insomnia, confusion, delusions, hallucinations, seizures, visual changes, or psychosis), and potentially profound muscular rigidity that sometimes progresses to fatal rhabdomyolysis.","definition_xrefs":["PMID:12048649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance withdrawal syndrome","termid":"MONDO:0005567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baclofen withdrawal syndrome","termid":"MONDO:0700046","xrefs":{"Monarch":{"xref_id":"0700046"}}}


id: GO:1904260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:23940118","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix assembly","termid":"GO:1901202"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"negatively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"down regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"down-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"downregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"inhibition of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"}],"termid":"GO:1904260"}


id: GO:2000076
data:
  {"annotated_genes":["SJAG_02392","SJAG_00845","SJAG_01787","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111151,119710,104066,91126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of site selection that occurs as part of cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokinesis","termid":"GO:0032467"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, site selection","termid":"GO:2000073"},{"relation_name":"positively_regulates","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokinesis, site selection","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of site selection involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:2000076","terms_by_termid":{"GO:1903617":null}}


id: PBO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 18, pseudogene","termid":"PBO:0060581"}


id: PBO:0090351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-lactate dehydrogenase, cytochrome Dld2","termid":"PBO:0090351"}


id: FYPO:0007861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids become physically detached in a cell that does not form a mitotic spindle or undergo cytokinesis. The DNA and nucleus may go on to divide in the absence of a spindle, with sister chromatids segregated to separate DNA masses.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"sister chromatid separation during nuclear fission","synonyms":[{"name":"chromosome separation during nuclear fission","type":"exact"},{"name":"sister chromatid separation during nuclear division in absence of mitotic spindle","type":"exact"},{"name":"sister chromatid separation during nuclear fission during mitotic cell cycle","type":"related"},{"name":"sister chromatid separation during nuclear fission during vegetative growth","type":"exact"}],"termid":"FYPO:0007861"}


id: PBO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 2","termid":"PBO:0051033"}


id: PBO:0056043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor tyrosine kinase","termid":"PBO:0056043"}


id: PBO:0070644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 15","termid":"PBO:0070644"}


id: MOD:01775
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to 5-glutamyl serotonin.","definition_xrefs":["RESID:AA0528","PubMed:11805836","PubMed:14697203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl serotonin","synonyms":[{"name":"(2S)-2-amino-5-([2-(5-hydroxy-1H-indol-3-yl)ethyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl serotonin","type":"exact"},{"name":"N2-(gamma-glutamyl)-5-hydoxytryptamine","type":"exact"},{"name":"N5-[2-(5-hydroxy-3-indolyl)ethyl]glutamine","type":"exact"}],"termid":"MOD:01775"}


id: MONDO:0016853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome Y is a rare chromosome Y structural anomaly, with a highly variable phenotype, mostly characterized by short stature, partial to total gonadal failure, sexual infantilism, genital anomalies (e.g. ambiguous genitalia, hypospadias, cryptorchidism), and azoospermia or oligozoospermia. Additional reported features include speech delay, obesity, and acanthosis nigricans. Gender dysphoria and comorbid bipolar disorder have also been observed.","definition_xrefs":["Orphanet:261529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome Y","secondary_identifiers":["GARD:20785","icd11.foundation:388539343","MEDGEN:1631964","SCTID:763407008","UMLS:C4706450"],"synonyms":[{"name":"Ring chromosome Y syndrome","type":"related"},{"name":"Ring chromosome type Y","type":"exact"},{"name":"r(Y)","type":"exact"}],"termid":"MONDO:0016853","xrefs":{"Monarch":{"xref_id":"0016853"}}}


id: PBO:0073317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydrolase like 2","termid":"PBO:0073317"}


id: PBO:0034346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_soma_location","termid":"PBO:0034346"}


id: PBO:0054023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1354","termid":"PBO:0054023"}


id: FYPO:0005058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping is decreased. Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["PomBase:mah","GO:1990898","PMID:26130711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased meiotic DNA double-strand break clipping","synonyms":[{"name":"reduced meiotic DNA double-strand break clipping","type":"exact"}],"termid":"FYPO:0005058"}


id: PBO:0083064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotate dehydrogenase; catalyzes the fourth enzymatic step in the de novo biosynthesis of pyrimidines, converting dihydroorotic acid into orotic acid","termid":"PBO:0083064"}


id: PBO:0078813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA nucleotidyl transferase 1","termid":"PBO:0078813"}


id: PBO:0017661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex biquitin protein ligase E3 subunit Vps11 (predicted)","termid":"PBO:0017661"}


id: GO:0043060
data:
  {"annotated_genes":["SJAG_03437","SJAG_01278","SJAG_03683","SJAG_03698","SJAG_01211","SJAG_02814","SJAG_00918","SJAG_03217","SJAG_03989","SJAG_02346","SJAG_01224","SJAG_04076","SJAG_03926","SJAG_05266","SJAG_01837","SJAG_00418","SJAG_05220","SJAG_01371","SJAG_02731","SJAG_00794","SJAG_07002","SJAG_05019","SJAG_05319","SJAG_05295","SJAG_01805","SJAG_03327","SJAG_03220","SJAG_04259","SJAG_01775"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98977,90641,94155,115929,117453,88161,108195,114171,101697],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[117075],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[113619,89500,110701,101701,107878,110744,95676,90105,94172,91341,98985,108199,98264,110276,102799,105850,109269,109525,100888,95921,114487,116316,117310],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A cell cycle process whereby homlogous chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator) by the spindle machinery and centromere/kinetochore arrangement during meiosis I chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic metaphase I homologous chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic metaphase I chromosome alignment","type":"exact"}],"termid":"GO:0043060","terms_by_termid":{"GO:0031619":null,"GO:0051455":null,"GO:1904967":null}}


id: GO:1901204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901204)","synonyms":[{"name":"regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901204"}


id: PBO:0082574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase II; catalyzes transfer of N-acetylglucosamine (GlcNAc) to chitin upon activation of zymogenic form; required for chitin synthesis in the primary septum during cytokinesis; localization regulated by Cdk1p during mitosis; phosphorylation by Dbf2p kinase regulates its dynamics and chitin synthesis during cytokinesis","termid":"PBO:0082574"}


id: PBO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2 pseudogene 1","termid":"PBO:0075224"}


id: MONDO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the testis and is characterized by the presence of one histologic component. This category includes seminoma, teratoma, embryonal carcinoma, yolk sac tumor, and trophoblastic tumor.","definition_xrefs":["NCIT:C39915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular pure germ cell tumor","secondary_identifiers":["DOID:4087","MEDGEN:308089","UMLS:C1514608"],"synonyms":[{"name":"testicular Pure germ cell tumor","type":"exact"},{"name":"testicular Pure germ cell tumour","type":"exact"}],"termid":"MONDO:0002874","xrefs":{"Monarch":{"xref_id":"0002874"}}}


id: GO:2000660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-1-mediated signaling pathway","termid":"GO:2000659"},{"relation_name":"negatively_regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"negative regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"negative regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"negative regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"negative regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000660"}


id: MOD:00390
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-decanoyl-L-serine.","definition_xrefs":["RESID:AA0385","Unimod:449#S","PubMed:12630926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-decanoylated residue","termid":"MOD:00668"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-decanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(decanoyloxy)propanoic acid","type":"exact"},{"name":"Decanoyl","type":"related"},{"name":"L-serine decanoate ester","type":"exact"},{"name":"LIPID O-decanoyl serine","type":"exact"},{"name":"O-decanoyl-L-serine","type":"exact"},{"name":"O-decanoylated L-serine","type":"exact"},{"name":"O3-decanoyl-L-serine","type":"exact"},{"name":"ODecSer","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00390"}


id: GO:0010801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"},{"relation_name":"negatively_regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-threonine phosphorylation","termid":"GO:0010801"}


id: PBO:0055401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2831","termid":"PBO:0055401"}


id: PBO:0087448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit k of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; associated only with the dimeric form of ATP synthase","termid":"PBO:0087448"}


id: PBO:0003884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylic acid transporter (predicted)","termid":"PBO:0003884"}


id: GO:0006971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["PMID:12598593","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypotonic response","synonyms":[{"name":"hypo-osmotic response","type":"exact"}],"termid":"GO:0006971"}


id: PBO:0069033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 278, pseudogene","termid":"PBO:0069033"}


id: PBO:0013232
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"community_curated","termid":"PBO:0013232"}


id: GO:0019570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"L-arabinose catabolic process","termid":"GO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-arabinose catabolic process to 2-oxoglutarate","synonyms":[{"name":"L-arabinose breakdown to 2-oxoglutarate","type":"exact"},{"name":"L-arabinose catabolic process to 2-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"L-arabinose catabolism to 2-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolism to alpha-ketoglutarate","type":"exact"},{"name":"L-arabinose catabolism to alpha-oxoglutarate","type":"exact"},{"name":"L-arabinose degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019570"}


id: GO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticotropin-releasing hormone, a polypeptide hormone involved in the stress response. It is released by the hypothalamus and stimulates the release of corticotropin by the anterior pituitary gland.","definition_xrefs":["PMID:7556876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"corticotropin-releasing hormone binding","secondary_identifiers":["GO:0017047"],"synonyms":[{"name":"CRF binding","type":"exact"},{"name":"CRH binding","type":"exact"},{"name":"corticoliberin binding","type":"exact"},{"name":"corticotropin-releasing factor binding","type":"exact"}],"termid":"GO:0051424"}


id: PBO:0057869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-2","termid":"PBO:0057869"}


id: PBO:0040596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 1","termid":"PBO:0040596"}


id: MONDO:0031432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal","secondary_identifiers":["MEDGEN:355288","OMIMPS:609698","UMLS:C1864761"],"termid":"MONDO:0031432","xrefs":{"Monarch":{"xref_id":"0031432"}}}


id: MONDO:0014261
data:
  {"annotated_genes":["SJAG_04588"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86196],"is_not":false,"summary":null,"term":"MONDO:0014261"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the SFXN4 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"growth and developmental delay-hypotonia-vision impairment-lactic acidosis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3810001","GARD:17615","Orphanet:391348","MEDGEN:816331","OMIM:615578","DOID:0111484"],"synonyms":[{"name":"COXPD18","type":"related"},{"name":"SFXN4 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 18","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in SFXN4","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 18","type":"exact"}],"termid":"MONDO:0014261","terms_by_termid":{"MONDO:0014261":null},"xrefs":{"Monarch":{"xref_id":"0014261"}}}


id: GO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T-helper 1 cell in response to an external stimulus.","definition_xrefs":["GOC:BHF","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell chemotaxis","synonyms":[{"name":"Th1 cell chemotaxis","type":"exact"}],"termid":"GO:0035706"}


id: PBO:0083988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutaredoxin that employs a dithiol mechanism of catalysis; monomeric; activity is low and null mutation does not affect sensitivity to oxidative stress; GFP-fusion protein localizes to the cytoplasm; expression strongly induced by arsenic","termid":"PBO:0083988"}


id: FYPO:0004640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CAAX-protein geranylgeranyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal CAAX-protein geranylgeranyltransferase activity","termid":"FYPO:0004640"}


id: PBO:0011085
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, thiamine Km 6 uM","termid":"PBO:0011085"}


id: CHEBI:15361
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A 2-oxo monocarboxylic acid anion that is the conjugate base of pyruvic acid, arising from deprotonation of the carboxy group.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate","termid":"CHEBI:15361"}


id: PBO:0074175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 2","termid":"PBO:0074175"}


id: GO:1903865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sigma factor antagonist activity.","definition_xrefs":["GO_REF:0000088","PMID:23687042","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sigma factor antagonist complex","termid":"GO:1903865"}


id: GO:0032600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor out of a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"chemokine receptor transport within lipid bilayer","termid":"GO:0033606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"chemokine receptor transport out of membrane raft","synonyms":[{"name":"chemokine receptor translocation out of membrane raft","type":"exact"},{"name":"chemokine receptor transport out of lipid raft","type":"exact"}],"termid":"GO:0032600"}


id: PBO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine like 1","termid":"PBO:0044510"}


id: PBO:0029479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sterol_ester_level","termid":"PBO:0029479"}


id: PBO:0017076
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P enzyme-substrate contact points identified using pre-tRNAs with modified bases","termid":"PBO:0017076"}


id: PBO:0074020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14","termid":"PBO:0074020"}


id: PBO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicrotuBule Organizer","termid":"PBO:0005596"}


id: PBO:0076785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase","termid":"PBO:0076785"}


id: MONDO:0019653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial idiopathic steroid-resistant nephrotic syndrome with minimal changes","secondary_identifiers":["Orphanet:93216"],"termid":"MONDO:0019653","xrefs":{"Monarch":{"xref_id":"0019653"}}}


id: PBO:0054743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2152","termid":"PBO:0054743"}


id: PBO:0051043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-1","termid":"PBO:0051043"}


id: FYPO:0001277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal MCM complex assembly","termid":"FYPO:0000448"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished MCM complex assembly","synonyms":[{"name":"MCM complex assembly abolished","type":"exact"},{"name":"abolished MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001277"}


id: PBO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Dre4","termid":"PBO:0000351"}


id: PBO:0005699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27 (predicted)","termid":"PBO:0005699"}


id: PBO:0030790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_volume_spheroid_vegetative_cell","termid":"PBO:0030790"}


id: PBO:0039567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 62 pseudogene 1","termid":"PBO:0039567"}


id: MONDO:0018849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentinogenesis imperfecta (DGI) is a hereditary dentin defect characterized by abnormal dentin structure resulting in abnormal tooth development.","definition_xrefs":["Orphanet:49042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentinogenesis imperfecta","secondary_identifiers":["NCIT:C84667","MESH:D003811","SCTID:196286005","icd11.foundation:2090257992","MEDGEN:8313","MedDRA:10054013","HP:0000703","DOID:4154","GARD:6258","ICD9:520.5","UMLS:C0011436"],"synonyms":[{"name":"DGI","type":"exact"},{"name":"DGI without OI","type":"exact"},{"name":"DI","type":"exact"},{"name":"dentinogenesis imperfecta","type":"exact"},{"name":"dentinogenesis imperfecta (disease)","type":"exact"},{"name":"dentinogenesis imperfecta without osteogenesis imperfecta","type":"exact"},{"name":"non-syndromic DGI","type":"exact"},{"name":"non-syndromic dentinogenesis imperfecta","type":"exact"},{"name":"opalescent teeth without OI","type":"exact"},{"name":"opalescent teeth without osteogenesis imperfecta","type":"exact"}],"termid":"MONDO:0018849","xrefs":{"Monarch":{"xref_id":"0018849"}}}


id: GO:1902783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decane stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","GO_REF:0000071","PMID:23826995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to decane","termid":"GO:1902782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to decane","termid":"GO:1902783"}


id: PBO:0027692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_indistinct_DNA","termid":"PBO:0027692"}


id: MONDO:0020668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spastic paraplegia 5B (obsolete MONDO:0020668)","secondary_identifiers":["OMIM:600146"],"synonyms":[{"name":"SPG5B","type":"related"},{"name":"moved to 270800","type":"related"}],"termid":"MONDO:0020668","xrefs":{"Monarch":{"xref_id":"0020668"}}}


id: MONDO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma of the stomach arising on a background of intestinal metaplasia. Microscopically, it is characterized by a glandular pattern and it closely resembles a colonic adenocarcinoma. Grossly, it tends to be nodular, polypoid or ulcerated.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"intestinal type adenocarcinoma","termid":"MONDO:0006254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric intestinal type adenocarcinoma","secondary_identifiers":["NCIT:C9157","MEDGEN:79017","UMLS:C0279633","EFO:0000504","ONCOTREE:ISTAD"],"synonyms":[{"name":"gastric intestinal type adenocarcinoma","type":"exact"},{"name":"gastric intestinal-type adenocarcinoma","type":"exact"},{"name":"intestinal adenocarcinoma of stomach","type":"exact"},{"name":"intestinal adenocarcinoma of the stomach","type":"exact"},{"name":"intestinal gastric adenocarcinoma","type":"exact"},{"name":"intestinal stomach adenocarcinoma","type":"exact"},{"name":"intestinal type stomach adenocarcinoma","type":"related"}],"termid":"MONDO:0005037","xrefs":{"Monarch":{"xref_id":"0005037"}}}


id: GO:2001103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltohexaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maltohexaose transport","termid":"GO:2001103"}


id: MONDO:1010998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia, non-human animal","termid":"MONDO:1010236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, dog","secondary_identifiers":["OMIA:000965-9615"],"termid":"MONDO:1010998","xrefs":{"Monarch":{"xref_id":"1010998"}}}


id: MONDO:0008760
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87379],"is_not":false,"summary":null,"term":"MONDO:0008760"}]},"cv_name":"mondo","definition":"Beta-ketothiolase (T2) deficiency is a rare organic aciduria affecting ketone body metabolism and the catabolism of isoleucine and characterized by intermittent ketoacidotic episodes associated with vomiting, dyspnea, tachypnoea, hypotonia, lethargy and coma, with an onset during infancy or toddlerhood and usually ceasing by adolescence.","definition_xrefs":["Orphanet:134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of ketolysis","termid":"MONDO:0019229"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"beta-ketothiolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:14723","MEDGEN:280689","NCIT:C98841","UMLS:C1536500","NANDO:1200987","GARD:872","MESH:C535434","NANDO:2200493","OMIM:203750"],"synonyms":[{"name":"2-Methyl-3-hydroxybutyric acidemia","type":"related"},{"name":"2-methyl-3-hydroxybutyricacidemia","type":"exact"},{"name":"3-Ktd deficiency","type":"related"},{"name":"3-ketothiolase deficiency","type":"exact"},{"name":"3-oxothiolase deficiency","type":"exact"},{"name":"ALPHA-methylacetoacetic aciduria","type":"related"},{"name":"Alpha methylacetoacetic aciduria","type":"exact"},{"name":"Alpha-methyl-acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"BKT","type":"exact"},{"name":"Beta ketothiolase deficiency","type":"related"},{"name":"Mat deficiency","type":"related"},{"name":"T2 deficiency","type":"exact"},{"name":"alpha-methylacetoaceticaciduria","type":"exact"},{"name":"beta-ketothiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-Coa thiolase deficiency","type":"related"},{"name":"mitochondrial acetoacetyl-coenzyme A thiolase deficiency","type":"exact"},{"name":"peroxisomal thiolase deficiency","type":"exact"}],"termid":"MONDO:0008760","terms_by_termid":{"MONDO:0008760":null},"xrefs":{"Monarch":{"xref_id":"0008760"}}}


id: MONDO:0014768
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86291,86292],"is_not":false,"summary":null,"term":"MONDO:0014768"},{"annotations":[86424,86425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"}]},"cv_name":"mondo","definition":"Any CADASIL in which the cause of the disease is a mutation in the HTRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","termid":"MONDO:0007432"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225211","MEDGEN:895965","OMIM:616779","DOID:0111036"],"synonyms":[{"name":"CADASIL 2","type":"exact"},{"name":"CADASIL caused by mutation in HTRA1","type":"exact"},{"name":"CADASIL type 2","type":"exact"},{"name":"CADASIL2","type":"exact"},{"name":"HTRA1 CADASIL","type":"exact"},{"name":"autosomal dominant cerebral arteriopathy with subcortical infarcts and leukoencephalopathy type 2","type":"exact"},{"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 2","type":"exact"}],"termid":"MONDO:0014768","terms_by_termid":{"MONDO:0010829":null,"MONDO:0014768":null},"xrefs":{"Monarch":{"xref_id":"0014768"}}}


id: GO:0070843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of misfolded proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.","definition_xrefs":["GOC:mah","PMID:14675537","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"misfolded protein transport","termid":"GO:0070843"}


id: GO:0014888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which striated muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle adaptation","synonyms":[{"name":"striated muscle plasticity","type":"related"}],"termid":"GO:0014888"}


id: GO:0008340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways that regulate the duration of the adult phase of the life-cycle of an animal.","definition_xrefs":["PMID:25561524","PMID:273723695","PMID:3424805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of adult lifespan","termid":"GO:0008340"}


id: PR:O94534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp14 gene.","definition_xrefs":["UniProtKB:O94534","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.07","synonyms":[{"name":"Spom972h-alp14","type":"exact"},{"name":"altered polarity protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94534"}


id: PBO:0059213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRM3 pseudogene 2","termid":"PBO:0059213"}


id: PBO:0061589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding transcript regulating alternative splicing","termid":"PBO:0061589"}


id: PBO:0002542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim13 (predicted)","termid":"PBO:0002542"}


id: MONDO:0010893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 4","secondary_identifiers":["MESH:C535697","UMLS:C1838102","OMIM:600467","MEDGEN:324944"],"synonyms":[{"name":"MHS4","type":"related"},{"name":"Mhs4","type":"related"},{"name":"malignant hyperpyrexia susceptibility type 4","type":"related"},{"name":"malignant hyperthermia susceptibility 4","type":"exact"},{"name":"malignant hyperthermia susceptibility type 4","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 4","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0010893","xrefs":{"Monarch":{"xref_id":"0010893"}}}


id: PBO:0087669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the INO80 chromatin remodeling complex","termid":"PBO:0087669"}


id: PBO:0044453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 32, pseudogene","termid":"PBO:0044453"}


id: MONDO:0006060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the nasopharynx.","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasopharyngeal squamous cell carcinoma","secondary_identifiers":["MEDGEN:76017","UMLS:C0279698","MESH:C538339","NCIT:C167265","EFO:1000058","NCIT:C3871"],"termid":"MONDO:0006060","xrefs":{"Monarch":{"xref_id":"0006060"}}}


id: MONDO:0100329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The initial viral infectious disase that causes illness.","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary viral infectious disease","termid":"MONDO:0100329","xrefs":{"Monarch":{"xref_id":"0100329"}}}


id: PBO:0078201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-3","termid":"PBO:0078201"}


id: FYPO:0005066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at centromere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at centromeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0005066"}


id: PATO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000076 regulation (obsolete PATO:0000076)","termid":"PATO:0000076"}


id: PBO:0029784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_septated_cells_with_abnormal_morphology_(obsolete_FYPO:0002453)","termid":"PBO:0029784"}


id: PR:O13951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iwr1 gene.","definition_xrefs":["UniProtKB:O13951","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear localization protein iwr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.08","synonyms":[{"name":"Spom972h-iwr1","type":"exact"}],"termid":"PR:O13951"}


id: GO:0046380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylneuraminate metabolic process","termid":"GO:0006054"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-acetylneuraminate biosynthetic process","synonyms":[{"name":"N-acetylneuraminate anabolism","type":"exact"},{"name":"N-acetylneuraminate biosynthesis","type":"exact"},{"name":"N-acetylneuraminate formation","type":"exact"},{"name":"N-acetylneuraminate synthesis","type":"exact"}],"termid":"GO:0046380"}


id: PR:C6Y4C3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein ecl3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.12c","synonyms":[{"name":"Spom972h-ecl3","type":"exact"}],"termid":"PR:C6Y4C3"}


id: PBO:0084862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit","termid":"PBO:0084862"}


id: GO:1990075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane region adjacent to the base of eukaryotic cilia and flagella that is enriched in endocytosis-associated proteins and vesicles and that appears to regulate ciliary membrane homeostasis.","definition_xrefs":["GOC:krc","PMID:22342749","GOC:cilia","GOC:dr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"periciliary membrane compartment","synonyms":[{"name":"PCMC","type":"exact"}],"termid":"GO:1990075"}


id: GO:0012501
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258","SJAG_01527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96906],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0012502"},{"annotations":[79925,74325],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"A process which begins when a cell receives an internal or external signal and activates a series of biochemical events (signaling pathway). The process ends with the death of the cell.","definition_xrefs":["GOC:mtg_apoptosis","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell death","termid":"GO:0008219"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01527":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5357801","Wikipedia:Programmed_cell_death","GO:0016244"],"synonyms":[{"name":"PCD","type":"related"},{"name":"RCD","type":"related"},{"name":"caspase-independent apoptosis","type":"related"},{"name":"caspase-independent cell death","type":"narrow"},{"name":"non-apoptotic programmed cell death","type":"narrow"},{"name":"nonapoptotic programmed cell death","type":"narrow"},{"name":"regulated cell death","type":"broad"}],"termid":"GO:0012501","terms_by_termid":{"GO:0012502":null,"GO:0043065":null}}


id: GO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 3',5'-cyclic AMP + H2O = AMP + H+ and 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["PMID:8557689","PMID:9419816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-AMP phosphodiesterase activity","termid":"GO:0004115"},{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-111955"],"synonyms":[{"name":"calmodulin-activated cyclic-nucleotide dual specificity phosphodiesterase activity","type":"related"},{"name":"calmodulin-dependent cyclic-nucleotide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004117"}


id: PBO:0039078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 5","termid":"PBO:0039078"}


id: PBO:0068120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 427","termid":"PBO:0068120"}


id: MONDO:0009644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency","termid":"MONDO:0020480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","secondary_identifiers":["DOID:0111163","Orphanet:308393","MESH:C565373","UMLS:C1854989","PMID:10053004","MEDGEN:340760","GARD:17387","OMIM:252160"],"synonyms":[{"name":"MOCOD type B","type":"exact"},{"name":"MOCODB","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase and aldehyde oxidase type B","type":"exact"},{"name":"molybdenum cofactor deficiency B","type":"exact"},{"name":"molybdenum cofactor deficiency complementation group B","type":"exact"},{"name":"molybdenum cofactor deficiency type B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group type B","type":"exact"},{"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","type":"exact"}],"termid":"MONDO:0009644","xrefs":{"Monarch":{"xref_id":"0009644"}}}


id: GO:1905109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["GO_REF:0000058","GOC:bc","PMID:22161164","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood vessel remodeling","termid":"GO:0060312"},{"relation_name":"regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"regulation of pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:1905109"}


id: FYECO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which antimycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ antimycin A","synonyms":[{"name":"respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000143"}


id: PBO:0077233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1","termid":"PBO:0077233"}


id: GO:0052908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 S-adenosyl-L-methionine + adenine(1518)/adenine(1519) in 16S rRNA = 4 S-adenosyl-L-homocysteine + N(6)-dimethyladenine(1518)/N(6)-dimethyladenine(1519) in 16S rRNA.","definition_xrefs":["RHEA:19609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","termid":"GO:0000179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.182","MetaCyc:RXN-11633"],"synonyms":[{"name":"S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase activity","type":"related"}],"termid":"GO:0052908"}


id: GO:1902320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA duplex unwinding that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear DNA replication DNA duplex unwinding (obsolete GO:1902320)","synonyms":[{"name":"DNA duplex unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA duplex unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA duplex unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA duplex unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"duplex DNA melting involved in DNA replication during S phase","type":"related"},{"name":"duplex DNA melting involved in DNA replication involved in S phase","type":"exact"},{"name":"duplex DNA melting involved in DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902320"}


id: GO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The myosin part of any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"},{"relation_name":"part_of","term_name":"actomyosin","termid":"GO:0042641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actomyosin, myosin complex part","termid":"GO:0042642"}


id: GO:0006436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. The tryptophanyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a tryptophan-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tryptophanyl-tRNA aminoacylation","termid":"GO:0006436"}


id: PBO:0090407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family protease","termid":"PBO:0090407"}


id: PBO:0048636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 5","termid":"PBO:0048636"}


id: PBO:0079188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 17, pseudogene","termid":"PBO:0079188"}


id: MONDO:0011798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","secondary_identifiers":["MESH:C564603","Orphanet:157855","MEDGEN:337612","UMLS:C1846582","OMIM:607236"],"synonyms":[{"name":"harp syndrome","type":"related"},{"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","type":"exact"}],"termid":"MONDO:0011798","xrefs":{"Monarch":{"xref_id":"0011798"}}}


id: GO:0106325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0106325)","termid":"GO:0106325"}


id: PBO:0057957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-1","termid":"PBO:0057957"}


id: PBO:0091369
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant showed a repair profile very similar to that of the rad51delta single mutant","termid":"PBO:0091369"}


id: MOD:01537
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01537"}


id: PBO:0042421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 5","termid":"PBO:0042421"}


id: MONDO:0012526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary angioedema type 3 (HAE 3) is a form of hereditary angioedema characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema type 3","secondary_identifiers":["DOID:0080940","GARD:16935","UMLS:C1857728","MEDGEN:346653","OMIM:610618","SCTID:427167008","ICD9:277.6","MESH:D056828"],"synonyms":[{"name":"F12 hereditary angioedema","type":"exact"},{"name":"HAE 3","type":"exact"},{"name":"HAE-III","type":"exact"},{"name":"HAE3","type":"related"},{"name":"Hae 3","type":"related"},{"name":"Hae with normal C1 inhibitor concentration and function","type":"related"},{"name":"angioedema, hereditary, 3","type":"exact"},{"name":"angioedema, hereditary, type 3","type":"related"},{"name":"angioedema, hereditary, type III","type":"related"},{"name":"angioneurotic edema, hereditary, with normal C1 inhibitor concentration and function","type":"related"},{"name":"estrogen-related Hae","type":"related"},{"name":"estrogen-sensitive Hae","type":"related"},{"name":"hereditary angioedema caused by mutation in F12","type":"exact"},{"name":"hereditary angioedema type 3","type":"exact"},{"name":"hereditary angioedema with normal C1 inhibitor activity","type":"related"},{"name":"hereditary angioneurotic edema type 3","type":"exact"},{"name":"hereditary angioneurotic oedema type 3","type":"exact"},{"name":"inherited estrogen-associated angioedema","type":"exact"},{"name":"inherited estrogen-associated angioneurotic edema","type":"exact"},{"name":"inherited estrogen-associated angioneurotic oedema","type":"exact"},{"name":"inherited estrogen-dependent angioedema","type":"exact"},{"name":"inherited estrogen-dependent angioneurotic edema","type":"exact"},{"name":"inherited estrogen-dependent angioneurotic oedema","type":"exact"}],"termid":"MONDO:0012526","xrefs":{"Monarch":{"xref_id":"0012526"}}}


id: PBO:0000709
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human eif3h","termid":"PBO:0000709"}


id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: PBO:0046545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 2","termid":"PBO:0046545"}


id: PBO:0040150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH1L intronic transcript 1","termid":"PBO:0040150"}


id: MONDO:0018680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pseudolymphoma of the skin.","definition_xrefs":["NCIT:C62776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"cutaneous pseudolymphoma","secondary_identifiers":["GARD:21889","SCTID:128862000","UMLS:C0311220","Orphanet:451607","icd11.foundation:1620802923","MEDGEN:81385"],"synonyms":[{"name":"lymphadenosis Benigna cutis","type":"exact"},{"name":"lymphocytoma cutis","type":"exact"},{"name":"pseudolymphoma of Spiegler","type":"exact"}],"termid":"MONDO:0018680","xrefs":{"Monarch":{"xref_id":"0018680"}}}


id: GO:0150115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-substrate junction. A cell-substrate junction is a specialized region of connection between a cell and the extracellular matrix.","definition_xrefs":["PMID:1643657","GOC:aruk","PMID:10419689","GOC:bc","PMID:26923917","PMID:16805308","PMID:8314002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction organization","termid":"GO:0150115"}


id: PBO:0077219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 16 homolog pseudogene 2","termid":"PBO:0077219"}


id: MONDO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to perceive any auditory information but whose hearing is intact.","definition_xrefs":["DOID:0060140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory agnosia","termid":"MONDO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical deafness","secondary_identifiers":["UMLS:C0392704","MEDGEN:98233"],"termid":"MONDO:0000670","xrefs":{"Monarch":{"xref_id":"0000670"}}}


id: PBO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 1","termid":"PBO:0061701"}


id: PBO:0110390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 59","termid":"PBO:0110390"}


id: SO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H+ mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat2P","termid":"SO:0002157"}


id: GO:0004813
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76226],"is_not":false,"summary":null,"term":"GO:0004813"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala).","definition_xrefs":["EC:6.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0140098","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"alanine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ALANINE--TRNA-LIGASE-RXN","RHEA:12540","Reactome:R-HSA-379864","Reactome:R-HSA-380177"],"synonyms":[{"name":"Ala-tRNA synthetase activity","type":"related"},{"name":"AlaRS","type":"related"},{"name":"L-alanine:tRNAAla ligase (AMP-forming)","type":"related"},{"name":"alanine tRNA synthetase activity","type":"related"},{"name":"alanine transfer RNA synthetase activity","type":"related"},{"name":"alanine translase activity","type":"related"},{"name":"alanine-transfer RNA ligase activity","type":"related"},{"name":"alanyl-tRNA synthetase activity","type":"exact"},{"name":"alanyl-transfer RNA synthetase activity","type":"related"},{"name":"alanyl-transfer ribonucleate synthase activity","type":"related"},{"name":"alanyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"alanyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004813","terms_by_termid":{"GO:0004813":null}}


id: GO:0060651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland bud epithelial cell proliferation that results in the elongation of the bud.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060651"}


id: PBO:0068730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 1","termid":"PBO:0068730"}


id: PBO:0063204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 overlapping transcript 1","termid":"PBO:0063204"}


id: GO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA9-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071127"}


id: PBO:0074171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 2","termid":"PBO:0074171"}


id: PBO:0053985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1301","termid":"PBO:0053985"}


id: PBO:0004437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex alpha subunit Egd2","termid":"PBO:0004437"}


id: PBO:0043595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXV alpha 1 chain","termid":"PBO:0043595"}


id: MONDO:0008100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipples inverted","secondary_identifiers":["OMIM:163600","UMLS:C0269269","MEDGEN:82844"],"synonyms":[{"name":"Mammillae Invertitae","type":"related"},{"name":"nipples inverted","type":"exact"}],"termid":"MONDO:0008100","xrefs":{"Monarch":{"xref_id":"0008100"}}}


id: GO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (2S)-bornyl diphosphate.","definition_xrefs":["PMID:42357","RHEA:18209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"geranyl-diphosphate cyclase activity","secondary_identifiers":["KEGG_REACTION:R02007","MetaCyc:GERANYL-DIPHOSPHATE-CYCLASE-RXN","EC:5.5.1.8"],"synonyms":[{"name":"(+)-bornyl-diphosphate lyase (decyclizing)","type":"related"},{"name":"(+)-bornylpyrophosphate cyclase activity","type":"related"},{"name":"bornyl diphosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0047926"}


id: MONDO:0004131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A large, well differentiated squamous cell carcinoma with a cauliflower-like appearance, characterized by the presence of an exophytic and endophytic growth pattern. Morphologically, there is papillomatosis and acanthosis present, however cytologically the neoplastic squamous cells have a benign appearance. Dysplastic changes are minimal. It does not respond to conservative treatment and it is regarded by many authors as an intermediate lesion between condyloma acuminatum and squamous cell carcinoma.","definition_xrefs":["NCIT:C7470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"},{"relation_name":"is_a","term_name":"Buschke Lowenstein tumor","termid":"MONDO:0027026"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal verrucous carcinoma","secondary_identifiers":["MEDGEN:231066","DOID:7175","UMLS:C1332278"],"synonyms":[{"name":"anal Buschke-Lowenstein tumor","type":"exact"},{"name":"anal Buschke-Lowenstein tumour","type":"exact"},{"name":"anal giant (malignant) condyloma","type":"exact"},{"name":"anal verrucous carcinoma","type":"exact"}],"termid":"MONDO:0004131","xrefs":{"Monarch":{"xref_id":"0004131"}}}


id: GO:0160131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled self-propelled movement of a sperm cell from the uterus through the uterotubal junction (UTJ) into the oviduct, where interaction between the sperm and the UTJ acts as a major selective barrier for sperm, allowing only living, motile, uncapacitated, morphologically normal sperm with intact acrosomes to pass from the uterus into the oviduct.","definition_xrefs":["PMID:31131960","GOC:krc","PMID:29353867","PMID:32712384","PMID:34057175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm migration through the uterotubal junction","synonyms":[{"name":"sperm migration from the uterus to the oviduct","type":"exact"},{"name":"sperm migration through the UTJ","type":"related"}],"termid":"GO:0160131"}


id: MONDO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of an organized, regular atrial rhythm with atrial rate between 101 and 240 beats per minute. The P wave morphology must be distinct from the sinus P wave morphology. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial tachycardia","secondary_identifiers":["SCTID:276796006","UMLS:C0546959","ICD9:427.89","NANDO:2200218","EFO:0005308","MEDGEN:107485","NCIT:C35481"],"termid":"MONDO:0005479","xrefs":{"Monarch":{"xref_id":"0005479"}}}


id: GO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to a decrease in the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000437"}


id: PBO:0061494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural retina leucine zipper","termid":"PBO:0061494"}


id: PBO:0089328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Pan3","termid":"PBO:0089328"}


id: PBO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 1","termid":"PBO:0061267"}


id: MONDO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, nodular tumor that arises from the breast parenchyma. It is characterized by the proliferation of myoepithelial cells around spaces that are lined by epithelial cells. Occasionally, adenomyoepitheliomas may undergo malignant transformation.","definition_xrefs":["NCIT:C5144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"breast adenomyoepithelioma","termid":"MONDO:0002066"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign breast adenomyoepithelioma","secondary_identifiers":["MEDGEN:231421","UMLS:C1332477","DOID:1641"],"synonyms":[{"name":"benign adenomyoepithelioma of breast","type":"exact"},{"name":"benign adenomyoepithelioma of the breast","type":"exact"},{"name":"benign breast adenomyoepithelioma","type":"exact"},{"name":"breast adenomyoepithelioma, benign","type":"exact"}],"termid":"MONDO:0002065","xrefs":{"Monarch":{"xref_id":"0002065"}}}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_03587","SJAG_04073","SJAG_01290","SJAG_03123","SJAG_01453","SJAG_04771","SJAG_01255","SJAG_00610","SJAG_04666","SJAG_00876","SJAG_00218","SJAG_03705","SJAG_02222","SJAG_01835","SJAG_02590","SJAG_05285","SJAG_04659","SJAG_04462","SJAG_01787","SJAG_04509","SJAG_01288","SJAG_04668","SJAG_04483","SJAG_02446"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77179,63587,75565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[94825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[73452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[71306,74881,116209,76234,73454,113552,106480,91954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[78618,103004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[92781,87869],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88245],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[91127,106291,118430,118300,103210,105717,92765],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0033312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 19","secondary_identifiers":["DOID:0080281","OMIM:617629","UMLS:C4539944","MEDGEN:1613937"],"synonyms":[{"name":"SCZD19","type":"related"},{"name":"schizophrenia 19","type":"exact"},{"name":"schizophrenia 19 with or without an affective disorder","type":"related"},{"name":"schizophrenia 19, susceptibility to","type":"related"}],"termid":"MONDO:0033312","xrefs":{"Monarch":{"xref_id":"0033312"}}}


id: PBO:0080901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1","termid":"PBO:0080901"}


id: PBO:0049654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 8","termid":"PBO:0049654"}


id: MONDO:0005245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular seminoma (obsolete MONDO:0005245)","synonyms":[{"name":"obsolete testicular seminoma (disease)","type":"exact"}],"termid":"MONDO:0005245","xrefs":{"Monarch":{"xref_id":"0005245"}}}


id: PR:P87319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1301 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.01c","synonyms":[{"name":"Spom972h-vps1301","type":"exact"}],"termid":"PR:P87319"}


id: PBO:0088788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rok1","termid":"PBO:0088788"}


id: MONDO:0022430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardiopulmonary disorder characterized by systemic arterial hypoxemia secondary to pulmonary hypertension and extrapulmonary right to left shunting across the foramen ovale and ductus arteriosus.","definition_xrefs":["NCIT:C85006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent fetal circulation syndrome","secondary_identifiers":["SCTID:206597007","SCTID:233815004","SCTID:35604006","UMLS:C0031190","EFO:1001103","MEDGEN:45824","MESH:D010547"],"synonyms":[{"name":"PPHN","type":"exact"},{"name":"persistent fetal circulation","type":"exact"},{"name":"persistent foetal circulation","type":"exact"},{"name":"persistent pulmonary hypertension of the newborn","type":"exact"}],"termid":"MONDO:0022430","xrefs":{"Monarch":{"xref_id":"0022430"}}}


id: PBO:0085998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to bacterial nitroreductases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; protein becomes insoluble upon intracellular iron depletion; protein abundance increases in response to DNA replication stress","termid":"PBO:0085998"}


id: GO:0140163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts vasodilation via the action of a venom that suppresses bradykinin-dependent signaling.","definition_xrefs":["PMID:31370142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of G protein-coupled receptor signaling pathway","termid":"GO:0044513"},{"relation_name":"is_a","term_name":"venom-mediated perturbation of blood circulation","termid":"GO:0140134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated suppression of bradykinin-dependent vasodilation","termid":"GO:0140163"}


id: PBO:0061869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one cut homeobox 1","termid":"PBO:0061869"}


id: PBO:0085373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis; indole-3-acetic acid, an ATP-competitive inhibitor of TORC1, accumulates upon entry into stationary phase; TOR1 has a paralog, TOR2, that arose from the whole genome duplication","termid":"PBO:0085373"}


id: GO:1901114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of erythromycin.","definition_xrefs":["UniPathway:UPA00240","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"erythromycin metabolic process","termid":"GO:1901113"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"erythromycin catabolic process","synonyms":[{"name":"erythromycin breakdown","type":"exact"},{"name":"erythromycin catabolism","type":"exact"},{"name":"erythromycin degradation","type":"exact"}],"termid":"GO:1901114"}


id: PBO:0038956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 2","termid":"PBO:0038956"}


id: GO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-3-hydroxy-L-aspartate = NH4 + oxaloacetate.","definition_xrefs":["RHEA:12424","EC:4.3.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.16-RXN","KEGG_REACTION:R05758"],"synonyms":[{"name":"3-hydroxyaspartate dehydratase activity","type":"broad"},{"name":"L-threo-3-hydroxyaspartate dehydratase activity","type":"related"},{"name":"threo-3-hydroxy-L-aspartate ammonia-lyase (oxaloacetate-forming)","type":"related"},{"name":"threo-3-hydroxy-L-aspartate ammonia-lyase activity","type":"related"},{"name":"threo-3-hydroxyaspartate dehydratase activity","type":"related"}],"termid":"GO:0030848"}


id: MONDO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor arising from brain during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood germ cell brain tumor","secondary_identifiers":["NANDO:2200108","NCIT:C5795","DOID:7430","UMLS:C1377598","MEDGEN:277987"],"synonyms":[{"name":"Brain germ cell tumor","type":"exact"},{"name":"Brain germ cell tumour","type":"exact"},{"name":"childhood brain germ cell neoplasm","type":"exact"},{"name":"childhood brain germ cell tumor","type":"exact"},{"name":"childhood brain germ cell tumour","type":"exact"},{"name":"childhood germ cell brain neoplasm","type":"exact"},{"name":"germ cell neoplasm of childhood brain","type":"exact"},{"name":"germ cell neoplasm of paediatric brain","type":"exact"},{"name":"germ cell neoplasm of pediatric brain","type":"exact"},{"name":"germ cell neoplasm of the childhood brain","type":"exact"},{"name":"germ cell neoplasm of the paediatric brain","type":"exact"},{"name":"germ cell neoplasm of the pediatric brain","type":"exact"},{"name":"germ cell tumor of childhood brain","type":"exact"},{"name":"germ cell tumor of pediatric brain","type":"exact"},{"name":"germ cell tumor of the childhood brain","type":"exact"},{"name":"germ cell tumor of the pediatric brain","type":"exact"},{"name":"germ cell tumour of childhood brain","type":"exact"},{"name":"germ cell tumour of paediatric brain","type":"exact"},{"name":"germ cell tumour of the childhood brain","type":"exact"},{"name":"germ cell tumour of the paediatric brain","type":"exact"},{"name":"paediatric brain germ cell neoplasm","type":"exact"},{"name":"paediatric brain germ cell tumour","type":"exact"},{"name":"pediatric brain germ cell neoplasm","type":"exact"},{"name":"pediatric brain germ cell tumor","type":"exact"}],"termid":"MONDO:0004218","xrefs":{"Monarch":{"xref_id":"0004218"}}}


id: GO:0106317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methane + NADH + H+ + O2 = methanol + NAD+ + H2O.","definition_xrefs":["RHEA:13637"],"gene_count":0,"genotype_count":0,"name":"obsolete methane monooxygenase NADH activity (obsolete GO:0106317)","termid":"GO:0106317"}


id: PR:Q9USL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18B5.09c gene.","definition_xrefs":["UniProtKB:Q9USL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.09c","synonyms":[{"name":"Spom972h-SPCC18B5.09c","type":"exact"}],"termid":"PR:Q9USL2"}


id: GO:0033823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + 5-(D-galactosyloxy)-L-lysine-procollagen = UDP + 1,2-D-glucosyl-5-D-(galactosyloxy)-L-lysine-procollagen.","definition_xrefs":["EC:2.4.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"procollagen glucosyltransferase activity","secondary_identifiers":["MetaCyc:PROCOLLAGEN-GLUCOSYLTRANSFERASE-RXN","Reactome:R-HSA-1981157","RHEA:12576"],"synonyms":[{"name":"UDP-glucose-collagenglucosyltransferase activity","type":"related"},{"name":"UDP-glucose:5-(D-galactosyloxy)-L-lysine-procollagen D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:5-(D-galactosyloxy)-L-lysine-procollagen D-glucosyltransferase activity","type":"related"},{"name":"collagen glucosyltransferase activity","type":"related"},{"name":"collagen hydroxylysyl glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysine glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysine-glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-collagen glucosyltransferase activity","type":"related"}],"termid":"GO:0033823"}


id: MONDO:0007897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leukemia, chronic lymphocytic (obsolete MONDO:0007897)","termid":"MONDO:0007897","xrefs":{"Monarch":{"xref_id":"0007897"}}}


id: GO:0008638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Covalent addition of a specific tagging molecule to a protein, targeting the tagged protein for some fate e.g. degradation.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tagging activity (obsolete GO:0008638)","synonyms":[{"name":"protein tagging activity","type":"exact"}],"termid":"GO:0008638"}


id: GO:0016823
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018773"},{"annotations":[107157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-carbon bond in a ketonic substance, a substance containing a keto (C=O) group.","definition_xrefs":["EC:3.7.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016823","terms_by_termid":{"GO:0018773":null,"GO:0047621":null}}


id: MONDO:0009762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus, congenital, autosomal recessive","secondary_identifiers":["DOID:0111797","MEDGEN:462921","OMIM:257400","UMLS:C3151571","MESH:C564938"],"synonyms":[{"name":"Nystagmus, congenital motor, autosomal recessive","type":"related"},{"name":"nystagmus, congenital, autosomal recessive","type":"exact"}],"termid":"MONDO:0009762","xrefs":{"Monarch":{"xref_id":"0009762"}}}


id: GO:0048619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindgut are generated and organized, during the embryonic phase.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"hindgut morphogenesis","termid":"GO:0007442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hindgut morphogenesis","termid":"GO:0048619"}


id: GO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n, as carried out by individual cells.","definition_xrefs":["Wikipedia:Alkene","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene metabolic process","synonyms":[{"name":"alkene metabolism","type":"exact"}],"termid":"GO:0043449"}


id: GO:0000445
data:
  {"annotated_genes":["SJAG_04310","SJAG_00992","SJAG_05328","SJAG_04202","SJAG_04536","SJAG_04115"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64495,76345,77047,102225,111508,119320],"is_not":false,"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The THO complex when it is part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1, Tho2, Thp1, and Mft1, while the human complex is composed of 7 subunits.","definition_xrefs":["PMID:11060033","GOC:krc","PMID:16983072","PMID:11979277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"THO complex","termid":"GO:0000347"},{"relation_name":"part_of","term_name":"transcription export complex","termid":"GO:0000346"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"THO complex part of transcription export complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"THO complex part of TREX complex","type":"exact"}],"termid":"GO:0000445","terms_by_termid":{"GO:0000445":null}}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: PBO:0046264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 3","termid":"PBO:0046264"}


id: PBO:0108917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSTAG3 cohesin complex component like 3 (pseudogene)","termid":"PBO:0108917"}


id: PBO:0045615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 26 (pseudogene)","termid":"PBO:0045615"}


id: PBO:0055005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2420","termid":"PBO:0055005"}


id: PBO:0085493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proposed gamma subunit of the heterotrimeric G protein; interacts with the receptor Gpr1p; involved in regulation of pseudohyphal growth; requires Gpb1p or Gpb2p to interact with Gpa2p; overproduction causes prion curing","termid":"PBO:0085493"}


id: MONDO:0958237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated hyperferritinemia","secondary_identifiers":["OMIM:620729","UMLS:C3854388","MEDGEN:892475"],"synonyms":[{"name":"hyperferritinemia","type":"exact"}],"termid":"MONDO:0958237","xrefs":{"Monarch":{"xref_id":"0958237"}}}


id: MONDO:0018634
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"}]},"cv_name":"mondo","definition":"Hereditary amyloidosis refers to a group of inherited conditions that make up one of the subtypes of amyloidosis. Hereditary amyloidosisis characterized by the deposit of an abnormal protein called amyloid in multiple organs of the body where it should not be, which causes disruption of organ tissue structure and function. In hereditary amyloidosis, amyloid deposits most often occur in tissues of the heart, kidneys, and nervous system. While symptoms of hereditary amyloidosis may appear in childhood, most individuals do not experience symptoms until adulthood. There are many types of hereditary amyloidosis associated with different gene mutations and abnormal proteins. The most common type of hereditary amyloidosis is transthyretin amyloidosis (ATTR),a condition in which the amyloid deposits are most often made up of the transthyretin protein which is made in the liver. Other examplesof hereditary amyloidosis include, but are not limited to, apolipoprotein AI amyloidosis (A ApoAI), gelsolin amyloidosis (A Gel), lysozyme amyloidosis (A Lys), cystatin C amyloidosis (A Cys), fibrinogen Aα-chain amyloidosis (A Fib), and apolipoprotein AII amyloidosis (A ApoAII). Most types of hereditary amyloidosis are inherited in an autosomal dominant manner. Treatment is focused on addressing symptoms of organ damage and slowing down the production of amyloid when possible through methods such as liver transplants.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"hereditary amyloidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:148146","NCIT:C84555","Orphanet:444116","MESH:D028226","icd11.foundation:1152878652","UMLS:C0740340","SCTID:367601000119103","GARD:6611"],"synonyms":[{"name":"amyloidosis hereditary","type":"related"},{"name":"amyloidosis, Familial","type":"exact"},{"name":"familial amyloidosis","type":"related"},{"name":"hereditary amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0018634","terms_by_termid":{"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0018634"}}}


id: PBO:0086828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YOR338W transcription is regulated by Azf1p and its transcript is a specific target of the G protein effector Scp160p; identified as being required for sporulation in a high-throughput mutant screen; YOR338W has a paralog, FUN19, that arose from the whole genome duplication","termid":"PBO:0086828"}


id: GO:0015128
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92854],"is_not":false,"summary":null,"term":"GO:0015128"}]},"cv_name":"molecular_function","definition":"Enables the transfer of gluconate from one side of a membrane to the other. Gluconate is the aldonic acid derived from glucose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"gluconate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"}],"termid":"GO:0015128","terms_by_termid":{"GO:0015128":null}}


id: GO:1902294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication termination","termid":"GO:0006274"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"cell cycle DNA replication termination","synonyms":[{"name":"DNA replication termination involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902294"}


id: GO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-alpha-D-ribose 1-diphosphate + H2O = ribose 1,5 bisphosphate + phosphate + H+.","definition_xrefs":["PMID:12370170","MetaCyc:RXN-10969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5-phosphoribosyl 1-pyrophosphate pyrophosphatase activity","synonyms":[{"name":"PRPP pyrophosphatase activity","type":"exact"}],"termid":"GO:0043135"}


id: PATO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000525 soil composition sensitivity value (obsolete PATO:0000525)","termid":"PATO:0000525"}


id: MOD:00692
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein crosslink modification that is not chemically categorized.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncategorized crosslinked residues","termid":"MOD:00692"}


id: FYPO:0002333
data:
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cell phenotype that affects the localization of a protein in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03250":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04280":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04912":null,"SJAG_05207":null},"genotype_count":19,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild 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id: MONDO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 17-hydroxysteroid dehydrogenase deficiency (obsolete MONDO:0000003)","termid":"MONDO:0000003","xrefs":{"Monarch":{"xref_id":"0000003"}}}


id: PBO:0045924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand and coiled-coil domain containing 1","termid":"PBO:0045924"}


id: MONDO:0010269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coats disease (CD) is an idiopathic disorder characterized by retinal telangiectasia with deposition of intraretinal or subretinal exudates, potentially leading to retinal detachment and unilateral blindness. CD is classically an isolated and unilateral condition affecting otherwise healthy young children.","definition_xrefs":["Orphanet:190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal telangiectasia","termid":"MONDO:0004348"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Coats disease","secondary_identifiers":["icd11.foundation:2032707885","MedDRA:10015901","ICD9:362.12","MESH:D058456","UMLS:C0154832","GARD:6121","MEDGEN:102319","OMIM:300216","SCTID:360455002","DOID:7765"],"synonyms":[{"name":"Coats disease","type":"exact"},{"name":"Coats' disease","type":"exact"},{"name":"Coats' syndrome","type":"exact"},{"name":"Leber miliary aneurysm","type":"exact"},{"name":"congenital retinal telangiectasia","type":"exact"},{"name":"exudative retinopathy","type":"exact"},{"name":"retinal telangiectasis","type":"related"}],"termid":"MONDO:0010269","xrefs":{"Monarch":{"xref_id":"0010269"}}}


id: GO:0022875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + galactitol(out) = protein histidine + galactitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"galactitol transmembrane transporter activity","termid":"GO:0015577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0022857","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-galactitol phosphotransferase system transmembrane transporter activity","synonyms":[{"name":"galactitol PTS transporter activity","type":"exact"}],"termid":"GO:0022875"}


id: PBO:0058335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4709","termid":"PBO:0058335"}


id: PBO:0028986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-overlapping_meiosis_I_spindles","termid":"PBO:0028986"}


id: PBO:0039197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B","termid":"PBO:0039197"}


id: PATO:0000481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000481 negative regulation (obsolete PATO:0000481)","termid":"PATO:0000481"}


id: GO:1904316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:9321918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"response to PAF","type":"exact"},{"name":"response to platelet-activating factor","type":"exact"}],"termid":"GO:1904316"}


id: PBO:0057705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1292","termid":"PBO:0057705"}


id: GO:0043666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein.","definition_xrefs":["GOC:jp","PMID:11724821"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphoprotein phosphatase activity (obsolete GO:0043666)","synonyms":[{"name":"regulation of calcineurin activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"},{"name":"regulation of protein phosphatase type 2 activity","type":"related"},{"name":"regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"regulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0043666"}


id: PATO:0001935
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circular","termid":"PATO:0000411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obtuse","synonyms":[{"name":"roundish","type":"exact"}],"termid":"PATO:0001935"}


id: GO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-matrix adhesion","termid":"GO:0001952"}


id: MONDO:0044324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Al Kaissi syndrome is an autosomal recessive developmental disorder characterized by growth retardation, spine malformation, particularly of the cervical spine, dysmorphic facial features, and delayed psychomotor development with moderate to severe intellectual disability (summary by {1:Windpassinger et al., 2017}).","definition_xrefs":["OMIM:617694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic intellectual disability","termid":"MONDO:0100598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Al Kaissi syndrome","secondary_identifiers":["UMLS:C4540156","MEDGEN:1611968"],"synonyms":[{"name":"AL KAISSI syndrome","type":"related"},{"name":"ALKAS","type":"related"},{"name":"Growth retardation, spine malformation, dysmorphic facies, and developmental delay","type":"related"}],"termid":"MONDO:0044324","xrefs":{"Monarch":{"xref_id":"0044324"}}}


id: PBO:0039464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13A","termid":"PBO:0039464"}


id: GO:0021584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:dgh","GOC:dph","ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons formation","termid":"GO:0021584"}


id: PBO:0053860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1133","termid":"PBO:0053860"}


id: GO:0008855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield 5'-phosphomononucleotides.","definition_xrefs":["EC:3.1.11.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0004527","GO:0140097","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"exodeoxyribonuclease VII activity","secondary_identifiers":["MetaCyc:3.1.11.6-RXN"],"synonyms":[{"name":"E. coli exonuclease VII","type":"related"},{"name":"E. coli exonuclease VII activity","type":"narrow"},{"name":"Escherichia coli exonuclease VII","type":"related"},{"name":"endodeoxyribonuclease VII","type":"related"},{"name":"exonuclease VII activity","type":"related"}],"termid":"GO:0008855"}


id: PBO:0027360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity_during_vegetative_growth","termid":"PBO:0027360"}


id: PBO:0040612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 1","termid":"PBO:0040612"}


id: GO:0052758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,6-trinitrophenol + H- = 2,4,6-trinitrophenol hydride Meisenheimer complex. Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["UM-BBD_reactionID:r1065","GOC:mengo_curators","PMID:11995829"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity (obsolete GO:0052758)","synonyms":[{"name":"TNP reductase activity","type":"broad"},{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol hydride transferase activity","type":"exact"}],"termid":"GO:0052758"}


id: PBO:0091406
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC5L","termid":"PBO:0091406"}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: MONDO:0006275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung sarcomatoid carcinoma characterized by the presence of mononuclear and multinucleated pleomorphic neoplastic giant cells that lack cohesion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung sarcomatoid carcinoma","termid":"MONDO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung giant cell carcinoma","secondary_identifiers":["UMLS:C0345960","ONCOTREE:GCLC","ICD9:162.9","EFO:1000332","MESH:D018286","NCIT:C4452","SCTID:254631008","DOID:5583","MEDGEN:83392"],"synonyms":[{"name":"GCLC","type":"related"},{"name":"giant cell carcinoma","type":"broad"},{"name":"giant cell carcinoma of lung","type":"exact"},{"name":"giant cell carcinoma of the lung","type":"exact"},{"name":"giant cell lung carcinoma","type":"exact"},{"name":"lung giant cell carcinoma","type":"exact"}],"termid":"MONDO:0006275","xrefs":{"Monarch":{"xref_id":"0006275"}}}


id: PR:O60159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H(+)/Cl(-) exchange transporter 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anion/proton exchange transporter C19C7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.11","secondary_identifiers":["UniProtKB:O60159"],"synonyms":[{"name":"Spom972h-CLCN3","type":"exact"}],"termid":"PR:O60159"}


id: PBO:0083566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF DNF2/YDR093W","termid":"PBO:0083566"}


id: PBO:0074015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 6","termid":"PBO:0074015"}


id: GO:0015425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nonpolar amino acid(out) = ADP + phosphate + nonpolar amino acid(in).","definition_xrefs":["EC:7.4.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled nonpolar-amino acid transporter activity","secondary_identifiers":["MetaCyc:3.6.3.22-RXN","TC:3.A.1.4.1"],"synonyms":[{"name":"ATP-dependent nonpolar-amino acid transporter activity","type":"exact"},{"name":"leucine/isoleucine/valine porter activity","type":"related"},{"name":"nonpolar amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino acid ABC transporter","type":"exact"},{"name":"nonpolar-amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino-acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015425"}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: GO:0052754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + factor gamma-F420-2 + H+ = coenzyme F390-G + diphosphate.","definition_xrefs":["MetaCyc:RXN-18273","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GTP:coenzyme F420 guanyltransferase activity","synonyms":[{"name":"GTP:coenzyme F420 guanylyltransferase activity","type":"exact"},{"name":"coenzyme F390-G synthetase activity","type":"exact"}],"termid":"GO:0052754"}


id: PBO:0044265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 3","termid":"PBO:0044265"}


id: PBO:0063939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 4","termid":"PBO:0063939"}


id: PBO:0109464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense transcript 2","termid":"PBO:0109464"}


id: PBO:0067234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 305, pseudogene","termid":"PBO:0067234"}


id: PBO:0116635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase activating protein 1","termid":"PBO:0116635"}


id: MOD:00966
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-tryptophan residue by a formadehyde adduct to 1,2,3,4-tetrahydro-beta-carboline-3-carboxylic acid.","definition_xrefs":["DeltaMass:339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2,3,4-tetrahydro-beta-carboline-3-carboxylic acid","termid":"MOD:00966"}


id: PBO:0052880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-2","termid":"PBO:0052880"}


id: PBO:0066572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group CcEe antigens","termid":"PBO:0066572"}


id: PBO:0062111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 10 pseudogene","termid":"PBO:0062111"}


id: MONDO:8000019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertigo, benign recurrent, 1","secondary_identifiers":["MEDGEN:412807","MESH:C567620","UMLS:C2749845"],"synonyms":[{"name":"BRV1","type":"exact"},{"name":"vertigo, benign recurrent, 1","type":"exact"}],"termid":"MONDO:8000019","xrefs":{"Monarch":{"xref_id":"8000019"}}}


id: PBO:0087568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes; involved in RNA polymerase II transcription initiation and in chromatin modification; contains a YEATS domain","termid":"PBO:0087568"}


id: PBO:0004258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, unknown biological role","termid":"PBO:0004258"}


id: PBO:0044068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 12, pseudogene","termid":"PBO:0044068"}


id: PR:Q09706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pld1 gene.","definition_xrefs":["UniProtKB:Q09706","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.16c","synonyms":[{"name":"PLD 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pld1","type":"exact"},{"name":"choline phosphatase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylcholine-hydrolyzing phospholipase D1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09706"}


id: GO:0097219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sieve plate that contains several specialized sieve areas in either a scalariform or reticulate arrangement.","definition_xrefs":["POC:curators","ISBN:0471738433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve plate","termid":"GO:0097218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"compound sieve plate","termid":"GO:0097219"}


id: GO:0019594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mannitol metabolic process","synonyms":[{"name":"mannitol metabolism","type":"exact"}],"termid":"GO:0019594"}


id: FYPO:0006044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and the protruding kinetochore microtubules are surrounded by an extension of the nuclear envelope, with the kinetochore-attached end at the distal tip of the protrusion.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0000120","FYPO:0005447","FYPO:0002399","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","synonyms":[{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","type":"exact"},{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during M-phase","type":"exact"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope deformation","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during mitotic cell cycle","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during vegetative growth","type":"exact"},{"name":"long mitotic spindle microtubules with nuclear envelope protrusion from the kinetochore attached end of the microtubule","type":"exact"},{"name":"nuclear envelope protrusion with long mitotic kinetochore microtubules and kinetochore at tip of nuclear envelope protrusion","type":"exact"}],"termid":"FYPO:0006044"}


id: GO:2000100
data:
  {"annotated_genes":["SJAG_01799","SJAG_02022","SJAG_03581","SJAG_00236","SJAG_00661","SJAG_00845","SJAG_03637","SJAG_00596","SJAG_04461","SJAG_00333"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91498,94945,96021,104900,113435,119182],"is_not":false,"summary":null,"term":"GO:2000100"},{"annotations":[94102,100541,105729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[104065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity","termid":"GO:2000099"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000100","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null}}


id: GO:0050510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,3)-N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP.","definition_xrefs":["EC:2.4.1.226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1971491","Reactome:R-HSA-3595178","MetaCyc:RXN-16324","Reactome:R-HSA-9632034"],"synonyms":[{"name":"N-acetylgalactosaminyl-proteoglycan 3-b-glucuronosyltransferase activity","type":"exact"},{"name":"alpha-D-glucuronate:N-acetyl-beta-D-galactosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 3-beta-glucuronosyltransferase activity","type":"related"},{"name":"chondroitin glucuronyltransferase II activity","type":"related"}],"termid":"GO:0050510"}


id: GO:0043086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an enzyme.","definition_xrefs":["GOC:ebc","GOC:jl","GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catalytic activity","secondary_identifiers":["GO:0048553"],"synonyms":[{"name":"down regulation of enzyme activity","type":"exact"},{"name":"down regulation of metalloenzyme activity","type":"narrow"},{"name":"down-regulation of enzyme activity","type":"exact"},{"name":"down-regulation of metalloenzyme activity","type":"exact"},{"name":"downregulation of enzyme activity","type":"exact"},{"name":"downregulation of metalloenzyme activity","type":"narrow"},{"name":"inhibition of enzyme activity","type":"narrow"},{"name":"inhibition of metalloenzyme activity","type":"narrow"},{"name":"negative regulation of enzyme activity","type":"exact"},{"name":"negative regulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043086"}


id: PBO:0066632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein like 1","termid":"PBO:0066632"}


id: PBO:0050370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 73","termid":"PBO:0050370"}


id: PBO:0074493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAI3 antisense RNA 1","termid":"PBO:0074493"}


id: PATO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disomy quality inhering in a bearer by virtue of the bearer's containing two copies of the chromosome from one of the parents (with no contribution from the other parent).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Uniparental_disomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disomy","termid":"PATO:0001387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniparental disomy","termid":"PATO:0001388"}


id: GO:0075076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont adenylate cyclase activity (obsolete GO:0075076)","termid":"GO:0075076"}


id: MONDO:0021137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rare or common","termid":"MONDO:0021135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not rare","synonyms":[{"name":"common","type":"exact"}],"termid":"MONDO:0021137","xrefs":{"Monarch":{"xref_id":"0021137"}}}


id: PBO:0042375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200R1L antisense RNA 1","termid":"PBO:0042375"}


id: SO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant which disrupts the translation of an upstream open reading frame because the number of nucleotides inserted or deleted is not a multiple of three.","direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_variant","termid":"SO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_frameshift_variant","termid":"SO:0002387"}


id: GO:1901742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-deoxystreptamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-deoxystreptamine metabolic process","synonyms":[{"name":"2-deoxystreptamine metabolism","type":"exact"}],"termid":"GO:1901742"}


id: MONDO:0015346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, idiopathic, generalized form of reflex epilepsy characterized by childhood onset, unique seizure manifestations, striking light sensitivity, and possible occurrence of generalized tonic-clonic seizures.","definition_xrefs":["Orphanet:139431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset genetic generalized epilepsy syndrome","termid":"MONDO:0800498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy with eyelid myoclonia","secondary_identifiers":["GARD:19916","icd11.foundation:262814036","UMLS:C4274731","MedDRA:10084303","MEDGEN:901966","SCTID:716278005"],"synonyms":[{"name":"EEM","type":"exact"},{"name":"EMA","type":"exact"},{"name":"EMEA","type":"exact"},{"name":"Epilepsy with Eyelid Myoclonia","type":"exact"},{"name":"Jeavons syndrome","type":"exact"},{"name":"epilepsy with eyelid myoclonias","type":"exact"},{"name":"eyelid myoclonia with and without absences","type":"exact"}],"termid":"MONDO:0015346","xrefs":{"Monarch":{"xref_id":"0015346"}}}


id: PBO:0001600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Mde5","termid":"PBO:0001600"}


id: PBO:0048654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD3 antisense RNA 1","termid":"PBO:0048654"}


id: GO:0008133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete collagenase activity (obsolete GO:0008133)","synonyms":[{"name":"collagenase activity","type":"exact"}],"termid":"GO:0008133"}


id: PBO:0083593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR069C has a paralog, YHR214C-D, that arose from a segmental duplication","termid":"PBO:0083593"}


id: GO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:12154375","PMID:9133426","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell activation","synonyms":[{"name":"regulation of NK T lymphocyte activation","type":"exact"},{"name":"regulation of NK T-cell activation","type":"exact"},{"name":"regulation of NK T-lymphocyte activation","type":"exact"},{"name":"regulation of NKT cell activation","type":"exact"},{"name":"regulation of NT cell activation","type":"exact"},{"name":"regulation of natural T cell activation","type":"exact"},{"name":"regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051133"}


id: FYPO:0004832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase A does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase A is the stage of mitosis in which the kinetochore microtubules shorten as chromosomes move toward the spindle poles.","definition_xrefs":["PMID:16824200","PomBase:mah","GO:0000091","GO:1902967","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase A","synonyms":[{"name":"abolished protein localization to spindle midzone during mitotic anaphase A","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase A","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase A during vegetative growth","type":"exact"}],"termid":"FYPO:0004832"}


id: PBO:0060375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopalladin","termid":"PBO:0060375"}


id: PBO:0086236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Ulp1p; a Ubl (ubiquitin-like protein)-specific protease for Smt3p protein conjugates; detected in a phosphorylated state in the mitochondrial outer membrane; also detected in ER and nuclear envelope","termid":"PBO:0086236"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: FYPO:0001334
data:
  {"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[119891,119892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006545"},{"annotations":[119600,120006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the regulation of a molecular function, biological process, or biological quality in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00871":null,"SJAG_01330":null,"SJAG_03360":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"erg1delta":{"display_name":"erg1delta","display_uniquename":"erg1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00370:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"regulation phenotype during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_03360","SJAG_01330","SJAG_04284","SJAG_00370"],"single_locus_genotype_uniquenames":["mad2delta","shc1delta","erg1delta","nup61delta"],"synonyms":[{"name":"fission yeast regulation phenotype during vegetative growth","type":"exact"},{"name":"regulation phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001334","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000619":null,"FYPO:0004318":null,"FYPO:0006545":null,"FYPO_EXT:0000001":null}}


id: MONDO:0015027
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"}]},"cv_name":"mondo","definition":"A rare, autosomal dominant hereditary syndrome characterized by hypercalcemia, abnormally high levels of parathyroid hormone, and isolated hyperfunctioning parathyroid tumors.","definition_xrefs":["NCIT:C94830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"familial primary hyperparathyroidism","termid":"MONDO:0016365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"familial isolated hyperparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:99879","GARD:16923","icd11.foundation:1799621215","UMLS:C4551961","MEDGEN:1643161"],"synonyms":[{"name":"FIHP","type":"exact"},{"name":"FIHPT","type":"exact"},{"name":"familial isolated hyperparathyroidism","type":"exact"}],"termid":"MONDO:0015027","terms_by_termid":{"MONDO:0007767":null},"xrefs":{"Monarch":{"xref_id":"0015027"}}}


id: FYPO:0003468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA splicing is normal (i.e. indistinguishable from wild type). All RNA splicing may be normal, or one splicing of or more specific RNA molecules may be specifically assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA splicing","synonyms":[{"name":"normal RNA splicing during mitotic cell cycle","type":"related"},{"name":"normal RNA splicing during vegetative growth","type":"exact"},{"name":"normal RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"}],"termid":"FYPO:0003468"}


id: GO:0090600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->3)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["GOC:sd","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-1,3-glucosidase activity (obsolete GO:0090600)","termid":"GO:0090600"}


id: PATO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated brown","synonyms":[{"name":"pale brown","type":"exact"}],"termid":"PATO:0001268"}


id: MONDO:0004042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of the urethra in which the epithelial cells grow downward into the underlying supportive tissue.","definition_xrefs":["NCIT:C6173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral urothelial papilloma","termid":"MONDO:0002221"},{"relation_name":"is_a","term_name":"inverted urothelial papilloma","termid":"MONDO:0021109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra inverted papilloma","secondary_identifiers":["MEDGEN:237034","DOID:6934","UMLS:C1336887"],"synonyms":[{"name":"inverted papilloma of the urethra","type":"exact"},{"name":"inverted papilloma of urethra","type":"exact"},{"name":"urethra inverted papilloma","type":"exact"},{"name":"urethral inverted papilloma","type":"exact"}],"termid":"MONDO:0004042","xrefs":{"Monarch":{"xref_id":"0004042"}}}


id: GO:0102504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: luteolinidin + UDP-alpha-D-glucose = luteolinidin 5-O-glucoside + UDP + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolinidin 5-O-glucosyltransferase activity (obsolete GO:0102504)","termid":"GO:0102504"}


id: GO:0180023
data:
  {"annotated_genes":["SJAG_04599","SJAG_02840","SJAG_02436","SJAG_04304","SJAG_02427","SJAG_01339","SJAG_03466","SJAG_01122","SJAG_01161","SJAG_05679","SJAG_02535","SJAG_04492","SJAG_02868","SJAG_04992","SJAG_04180","SJAG_05248"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88001,92455,95202,97421,98335,99820,102884,104415,104494,104644,105173,105590,111120,111121,116967,116968],"is_not":false,"summary":null,"term":"GO:0180023"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cytosolic large ribosomal subunit.","definition_xrefs":["PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02535":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_03466":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04492":null,"SJAG_04599":null,"SJAG_04992":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"cytosolic large ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180023","terms_by_termid":{"GO:0180023":null}}


id: PR:Q10445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.12c","synonyms":[{"name":"Spom972h-rhp41","type":"exact"}],"termid":"PR:Q10445"}


id: PBO:0088566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa1/Ppa2","termid":"PBO:0088566"}


id: GO:0000098
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"sulfur amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1614558"],"synonyms":[{"name":"sulfur amino acid breakdown","type":"exact"},{"name":"sulfur amino acid catabolism","type":"exact"},{"name":"sulfur amino acid degradation","type":"exact"},{"name":"sulphur amino acid catabolic process","type":"exact"},{"name":"sulphur amino acid catabolism","type":"exact"}],"termid":"GO:0000098","terms_by_termid":{"GO:0019450":null}}


id: PBO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 13","termid":"PBO:0062170"}


id: PBO:0089699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Use1","termid":"PBO:0089699"}


id: PBO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 46","termid":"PBO:0071851"}


id: PBO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug114","termid":"PBO:0017664"}


id: GO:0120505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl79-[histone H3] + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:14732680","PMID:15371351","RHEA:60332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0016741","GO:0008276","GO:0003674"],"is_obsolete":false,"name":"histone H3K79 monomethyltransferase activity","termid":"GO:0120505"}


id: GO:0140979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleotides within a cell.","definition_xrefs":["PMID:23416111","PMID:34880500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}


id: MONDO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The deposition of calcium on the cornea, resulting in pain and decreased visual acuity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"keratopathy","termid":"MONDO:0002261"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"band keratopathy","secondary_identifiers":["MESH:C562399","UMLS:C0155120","MEDGEN:56354","OMIM:217500","icd11.foundation:184627034","ICD9:371.43","DOID:11164","SCTID:35055000","NCIT:C118765"],"synonyms":[{"name":"band keratopathy","type":"exact"},{"name":"band-shaped keratopathy","type":"exact"},{"name":"corneal dystrophy, band-SHAPED","type":"related"}],"termid":"MONDO:0009016","xrefs":{"Monarch":{"xref_id":"0009016"}}}


id: PBO:0056161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroH2A.2 histone","termid":"PBO:0056161"}


id: PBO:0064043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 77","termid":"PBO:0064043"}


id: PBO:0063873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 2","termid":"PBO:0063873"}


id: PBO:0041868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 16, pseudogene","termid":"PBO:0041868"}


id: GO:0047768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 3-carboxy-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.5","RHEA:14977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"carboxy-cis,cis-muconate cyclase activity","secondary_identifiers":["KEGG_REACTION:R03308","MetaCyc:CARBOXY-CISCIS-MUCONATE-CYCLASE-RXN"],"synonyms":[{"name":"3-carboxy-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"},{"name":"3-carboxy-cis,cis-muconate lactonizing enzyme activity","type":"related"},{"name":"3-carboxymuconate cyclase activity","type":"related"}],"termid":"GO:0047768"}


id: PBO:0066036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 5","termid":"PBO:0066036"}


id: GO:1902137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","PMID:8910615","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"(-)-secoisolariciresinol metabolic process","termid":"GO:1902136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(-)-secoisolariciresinol catabolic process","synonyms":[{"name":"(-)-secoisolariciresinol breakdown","type":"exact"},{"name":"(-)-secoisolariciresinol catabolism","type":"exact"},{"name":"(-)-secoisolariciresinol degradation","type":"exact"}],"termid":"GO:1902137"}


id: GO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A germline specific spherical organelle, rich in membrane skeletal proteins. Precursor to the fusome.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"spectrosome","termid":"GO:0045170"}


id: PBO:0049037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 26","termid":"PBO:0049037"}


id: MONDO:0024658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the extrahepatic bile ducts. Representative examples include Kaposi sarcoma, leiomyosarcoma, and rhabdomyosarcoma.","definition_xrefs":["NCIT:C5029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct sarcoma","termid":"MONDO:0002862"},{"relation_name":"is_a","term_name":"malignant tumor of extrahepatic bile duct","termid":"MONDO:0021321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"extrahepatic bile duct sarcoma","secondary_identifiers":["MEDGEN:473546","UMLS:C2205442"],"synonyms":[{"name":"extrahepatic bile duct sarcoma","type":"exact"},{"name":"sarcoma of extrahepatic bile duct","type":"exact"},{"name":"sarcoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0024658","xrefs":{"Monarch":{"xref_id":"0024658"}}}


id: GO:0060120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an inner ear receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell fate commitment","synonyms":[{"name":"inner ear hair cell fate commitment","type":"exact"}],"termid":"GO:0060120"}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: PBO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEven Binding","termid":"PBO:0000689"}


id: MONDO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare endocrine disease characterized by the appearance of transient hypothyroidism, usually in preterm newborns, following long or short-term topical iodine exposure. Parenteral exposure from iodinated contrast agents may similarly alter thyroid function in term neonates.","definition_xrefs":["Orphanet:238688"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"transient congenital hypothyroidism due to neonatal factor","termid":"MONDO:0016556"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal iodine exposure","secondary_identifiers":["UMLS:C4751432","GARD:20644","MEDGEN:1669806"],"synonyms":[{"name":"iodine antenatal exposure","type":"related"}],"termid":"MONDO:0016554","xrefs":{"Monarch":{"xref_id":"0016554"}}}


id: GO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + CoA + oxidized ferredoxin = S-(2-methylpropanoyl)-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity","secondary_identifiers":["MetaCyc:1.2.7.7-RXN","RHEA:11712"],"synonyms":[{"name":"2-ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"2-oxoisovalerate ferredoxin reductase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate synthase (ferredoxin) activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:ferredoxin oxidoreductase (decarboxylating; CoA-2-methylpropanoylating)","type":"exact"},{"name":"VOR","type":"related"},{"name":"branched-chain ketoacid ferredoxin reductase activity","type":"related"},{"name":"branched-chain oxo acid ferredoxin reductase activity","type":"related"},{"name":"keto-valine-ferredoxin oxidoreductase activity","type":"related"},{"name":"ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"ketoisovalerate oxidoreductase activity","type":"related"}],"termid":"GO:0043807"}


id: PBO:0075316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 7","termid":"PBO:0075316"}


id: GO:0033785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-alpha,beta-D-heptose-7-phosphate + ATP = D-beta-D-heptose-1,7-bisphosphate + ADP.","definition_xrefs":["RHEA:27473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"heptose 7-phosphate kinase activity","secondary_identifiers":["EC:2.7.1.167","MetaCyc:RXN0-4341"],"synonyms":[{"name":"D-alpha,beta-D-heptose 7-phosphate 1-kinase activity","type":"exact"}],"termid":"GO:0033785"}


id: MONDO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection of the nail, usually caused by dermatophytes; yeasts; or nondermatophyte molds.","definition_xrefs":["MESH:D014009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea unguium","secondary_identifiers":["ICD9:681.9","UMLS:C0040261","ICD10CM:B35.1","MEDGEN:11825","NCIT:C112214","DOID:13074"],"synonyms":[{"name":"cellulitis and abscess","type":"related"},{"name":"cellulitis and abscess of buttock","type":"exact"},{"name":"cellulitis and abscess of face","type":"exact"},{"name":"cellulitis and abscess of finger","type":"exact"},{"name":"cellulitis and abscess of finger and toe","type":"exact"},{"name":"cellulitis and abscess of gluteal region","type":"exact"},{"name":"cellulitis and abscess of trunk","type":"exact"},{"name":"cellulitis and abscess of upper arm and forearm","type":"exact"},{"name":"dermatophytic onychia","type":"exact"},{"name":"dermatophytic onychomycosis","type":"exact"},{"name":"dermatophytosis of nail","type":"exact"},{"name":"nail dermatophytosis","type":"exact"},{"name":"onychomycosis","type":"exact"},{"name":"onychomycosis due to dermatophyte","type":"exact"},{"name":"tinea unguium","type":"exact"}],"termid":"MONDO:0001628","xrefs":{"Monarch":{"xref_id":"0001628"}}}


id: PBO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 60, pseudogene","termid":"PBO:0044399"}


id: GO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to tumor cell","synonyms":[{"name":"regulation of tolerance induction to tumour cell","type":"exact"}],"termid":"GO:0002843"}


id: GO:0099611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the potential at which an axon potential is triggered.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing threshold","termid":"GO:0099611"}


id: PBO:0054929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2343","termid":"PBO:0054929"}


id: MONDO:0014022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy-dystroglycanopathy, type A in which the cause of the disease is a mutation in the RXYLT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10","secondary_identifiers":["DOID:0111239","GARD:15898","MEDGEN:767295","OMIM:615041","UMLS:C3554381"],"synonyms":[{"name":"MDDGA10","type":"related"},{"name":"RXYLT1 muscular dystrophy-dystroglycanopathy, type A","type":"exact"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, Tmem5-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 10","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, type A caused by mutation in RXYLT1","type":"exact"}],"termid":"MONDO:0014022","xrefs":{"Monarch":{"xref_id":"0014022"}}}


id: GO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: myo-inositol(out) + Na+(out) = myo-inositol(in) + Na+(in).","definition_xrefs":["TC:2.A.21.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol transmembrane transporter activity","termid":"GO:0005365"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"myo-inositol:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429663"],"synonyms":[{"name":"myo-inositol-sodium cotransporter activity","type":"broad"}],"termid":"GO:0005367"}


id: PBO:0059874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 11","termid":"PBO:0059874"}


id: GO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI/GSI anchor biosynthetic process (obsolete GO:0042080)","synonyms":[{"name":"GPI/GSI anchor anabolism","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthetic process","type":"exact"},{"name":"GPI/GSI anchor formation","type":"exact"},{"name":"GPI/GSI anchor synthesis","type":"exact"}],"termid":"GO:0042080"}


id: FYPO:0008011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA localization phenotype where the loading of siRNAs onto the RITs complex is abolished.","definition_xrefs":["PomBase:mlr","PMID:15615848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA localization","termid":"FYPO:0000366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished siRNA loading onto RITS complex","synonyms":[{"name":"abolished recruitment of siRNA onto RITS complex","type":"exact"},{"name":"decreased siRNA localization to RITS complex","type":"exact"}],"termid":"FYPO:0008011"}


id: PBO:0083792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the inner mitochondrial membrane; peripherally localized; component of the TIM22 complex, which is a twin-pore translocase that mediates insertion of numerous multispanning inner membrane proteins","termid":"PBO:0083792"}


id: GO:0018776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-3-chloroacrylic acid + H2O = H+ + malonate semialdehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-chloroacrylic acid dehalogenase activity (obsolete GO:0018776)","termid":"GO:0018776"}


id: MONDO:0003783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reduction in the number of lymphocytes.","definition_xrefs":["MESH:D008231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukopenia","termid":"MONDO:0003785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"lymphopenia","secondary_identifiers":["SCTID:48813009","icd11.foundation:298296736","ICD9:288.8","DOID:614","HP:0001888","ICD10CM:D72.810","ICD9:288.51","MEDGEN:7418","UMLS:C0024312"],"synonyms":[{"name":"lymphocytopenia","type":"exact"},{"name":"lymphopenia","type":"exact"},{"name":"lymphopenia (disease)","type":"exact"}],"termid":"MONDO:0003783","xrefs":{"Monarch":{"xref_id":"0003783"}}}


