# terms

id: GO:0042149
data:
  {"annotated_genes":["SJAG_03048","SJAG_00534","SJAG_01245","SJAG_02380","SJAG_02785","SJAG_03602","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70469,76360,76551,98784,100803,116873],"is_not":false,"summary":null,"term":"GO:0042149"},{"annotations":[102749],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00534":null,"SJAG_01245":null,"SJAG_02380":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03486":null,"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042149","terms_by_termid":{"GO:0042149":null,"GO:1904547":null}}


id: GO:0018298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or noncovalent attachment of a chromophore to a protein.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage (obsolete GO:0018298)","termid":"GO:0018298"}


id: GO:0010804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of the tumor necrosis factor-mediated signaling pathway. The tumor necrosis factor-mediated signaling pathway is the series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor-mediated signaling pathway","termid":"GO:0010803"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"negative regulation of TNF signaling","type":"exact"},{"name":"negative regulation of TNF-mediated signaling pathway","type":"exact"},{"name":"negative regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0010804"}


id: GO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:add","GOC:mah","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:1905077","GO:0045379"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: PBO:0067377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 479, pseudogene","termid":"PBO:0067377"}


id: PBO:0000909
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with non coding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0000909"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: PATO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's consisting of paired parts that alternately cross each other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decussate","synonyms":[{"name":"crosscutting","type":"exact"},{"name":"intercrossing","type":"exact"},{"name":"intersecting","type":"exact"}],"termid":"PATO:0001953"}


id: GO:1901030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","termid":"GO:1901028"},{"relation_name":"positively_regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-114294","Reactome:R-HSA-111452"],"synonyms":[{"name":"activation of MOMP","type":"narrow"},{"name":"activation of mitochondrial outer membrane permeabilization","type":"narrow"},{"name":"positive regulation of MOMP","type":"exact"},{"name":"positive regulation of mitochondrial outer membrane permeabilization","type":"broad"},{"name":"up regulation of MOMP","type":"exact"},{"name":"up regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"up-regulation of MOMP","type":"exact"},{"name":"up-regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"upregulation of MOMP","type":"exact"},{"name":"upregulation of mitochondrial outer membrane permeabilization","type":"exact"}],"termid":"GO:1901030"}


id: PBO:0085746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32","termid":"PBO:0085746"}


id: MONDO:0032485
data:
  {"annotated_genes":["SJAG_01778"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86890],"is_not":false,"summary":null,"term":"MONDO:0032485"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder 61","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618009","UMLS:C5231400","GARD:18514","MEDGEN:1684867"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER 61","type":"related"},{"name":"MRD61","type":"related"},{"name":"Mental Retardation, Autosomal Dominant 61","type":"related"}],"termid":"MONDO:0032485","terms_by_termid":{"MONDO:0032485":null},"xrefs":{"Monarch":{"xref_id":"0032485"}}}


id: GO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription factor TFIIH holo complex.","definition_xrefs":["PMID:11259578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex binding","termid":"GO:0062058"}


id: MONDO:1011243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nystagmus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus, non-human animal","termid":"MONDO:1010325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nystagmus, dog","secondary_identifiers":["OMIA:000731-9615"],"termid":"MONDO:1011243","xrefs":{"Monarch":{"xref_id":"1011243"}}}


id: MONDO:0100192
data:
  {"annotated_genes":["SJAG_00358","SJAG_01166","SJAG_02015","SJAG_04956"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[86285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024568"},{"annotations":[85493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014659"},{"annotations":[87206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032844"}]},"cv_name":"mondo","definition":"A liver disease characterized by the liver losing or has lost all of its function.","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01166":null,"SJAG_02015":null,"SJAG_04956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:88444","MESH:D017093","NCIT:C26922","UMLS:C0085605"],"synonyms":[{"name":"hepatic failure","type":"exact"}],"termid":"MONDO:0100192","terms_by_termid":{"MONDO:0013111":null,"MONDO:0014659":null,"MONDO:0024568":null,"MONDO:0032844":null},"xrefs":{"Monarch":{"xref_id":"0100192"}}}


id: MONDO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the penis. Representative examples include Kaposi sarcoma, leiomyosarcoma, and angiosarcoma.","definition_xrefs":["NCIT:C7730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile cancer","termid":"MONDO:0001325"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"penile sarcoma","secondary_identifiers":["MEDGEN:65960","UMLS:C0238352","DOID:11838"],"synonyms":[{"name":"penile sarcoma","type":"exact"},{"name":"penis sarcoma","type":"exact"},{"name":"sarcoma of penis","type":"exact"},{"name":"sarcoma of the penis","type":"exact"}],"termid":"MONDO:0001387","xrefs":{"Monarch":{"xref_id":"0001387"}}}


id: PBO:0028251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_septum","termid":"PBO:0028251"}


id: PBO:0044707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 1","termid":"PBO:0044707"}


id: PBO:0048932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLPH3 divergent transcript","termid":"PBO:0048932"}


id: PATO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking affinity for water; tending to repel and not absorb water; tending not to dissolve in or mix with or be wetted by water.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrophobicity","termid":"PATO:0001884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophobic","termid":"PATO:0001885"}


id: PBO:0085136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for export of tRNAs from the nucleus; also copurifies with the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA","termid":"PBO:0085136"}


id: GO:0060946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell of the heart. Blood vessel endothelial cells are thin flattened cells that line the inside surfaces of blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac blood vessel endothelial cell differentiation","termid":"GO:0060946"}


id: PBO:0057806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3128","termid":"PBO:0057806"}


id: PBO:0090896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spg1-binding protein Etd1","termid":"PBO:0090896"}


id: MONDO:0015145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurovascular malformation (obsolete MONDO:0015145)","secondary_identifiers":["Orphanet:102006"],"termid":"MONDO:0015145","xrefs":{"Monarch":{"xref_id":"0015145"}}}


id: FYPO:0007785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested at the G2/MI phase transition. Cells arrested at the G2/MI transition down-even in the presence of nutrients, in contrast with arrest at the mitotic G2/M transition, where cells continue to grow.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:28476936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in meiosis II","termid":"FYPO:0002223"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"abolished growth during meiotic cell cycle arrest at G2/M1","type":"related"}],"termid":"FYPO:0007785"}


id: PBO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase","termid":"PBO:0005582"}


id: GO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase III (RNAP III) transcription factor and recruiting it to the transcription machinery complex in order to modulate transcription by RNAP III.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase III transcription factor recruiting (obsolete GO:0001153)","synonyms":[{"name":"RNA polymerase III transcription factor recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001153"}


id: GO:0009721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an auxin stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to auxin","termid":"GO:0009733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of auxin stimulus","synonyms":[{"name":"perception of auxin stimulus","type":"related"}],"termid":"GO:0009721"}


id: GO:0006804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxidase reaction (obsolete GO:0006804)","synonyms":[{"name":"peroxidase reaction","type":"exact"}],"termid":"GO:0006804"}


id: GO:0072470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of cell size control checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cell size control checkpoint signaling","synonyms":[{"name":"cell size control checkpoint effector process","type":"exact"},{"name":"response to mitotic cell cycle cell size control checkpoint signaling","type":"exact"},{"name":"response to signal involved in cell size control checkpoint","type":"exact"}],"termid":"GO:0072470"}


id: PR:O94565
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh4 gene.","definition_xrefs":["UniProtKB:O94565","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.08c","synonyms":[{"name":"Spom972h-omh4","type":"exact"}],"termid":"PR:O94565"}


id: PR:000049732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen ubiquitinated form that has K63-linked Ub-Ub in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000049733.","definition_xrefs":["PomBase:MAH","PMID:27151298","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/K63diUbiq(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"K63-diubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA diubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen K63-diubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/K63diUbiq+","type":"exact"},{"name":"pcn1/K63diUbiq(K164)","type":"exact"}],"termid":"PR:000049732"}


id: PBO:0030658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Man9GlcNAc_level","termid":"PBO:0030658"}


id: PBO:0062619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Y member 1 pseudogene","termid":"PBO:0062619"}


id: PBO:0071137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 like 1","termid":"PBO:0071137"}


id: GO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"hemoglobin metabolic process","termid":"GO:0020027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin biosynthetic process","synonyms":[{"name":"haemoglobin biosynthesis","type":"exact"},{"name":"haemoglobin biosynthetic process","type":"exact"},{"name":"hemoglobin anabolism","type":"exact"},{"name":"hemoglobin biosynthesis","type":"exact"},{"name":"hemoglobin formation","type":"exact"},{"name":"hemoglobin synthesis","type":"exact"}],"termid":"GO:0042541"}


id: GO:0004274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal dipeptide, by the hydrolysis of the Xbb-Xcc bond in Xaa-Xbb-Xcc, preferentially when Xbb is Pro, provided Xcc is neither Pro nor hydroxyproline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase IV activity (obsolete GO:0004274)","synonyms":[{"name":"dipeptidyl-peptidase IV activity","type":"exact"}],"termid":"GO:0004274"}


id: PR:O43000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- liz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter liz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.01c","synonyms":[{"name":"Spom972h-liz1","type":"exact"}],"termid":"PR:O43000"}


id: FYPO:0007402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of protein complex organization is abnormal.","definition_xrefs":["GO:0043933","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein complex organization during vegetative growth","synonyms":[{"name":"abnormal protein complex organisation during vegetative growth","type":"exact"},{"name":"abnormal protein complex organization during mitotic cell cycle","type":"related"},{"name":"abnormal protein-containing complex subunit organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007402"}


id: PBO:0068989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 233, pseudogene","termid":"PBO:0068989"}


id: GO:0009162
data:
  {"annotated_genes":["SJAG_01974","SJAG_01055","SJAG_04627","SJAG_03771","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76148,117571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[79852,70328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70327,79825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009162","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009159":null}}


id: PBO:0064833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10 pseudogene 1","termid":"PBO:0064833"}


id: RO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in the end of s if p results in a change of state in s whereby s either ceases to exist, or s becomes functionally impaired or s has its fate committed such that it is put on a path to be degraded.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_ending_of","termid":"RO:0002552"}


id: PBO:0087995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophan synthase; catalyzes the last step of tryptophan biosynthesis; regulated by the general control system of amino acid biosynthesis","termid":"PBO:0087995"}


id: GO:2001132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a 3-(methylthio)propionic acid.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0006091","GO:0006629"],"is_obsolete":false,"name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}


id: GO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thyrotropin releasing hormone and secretagogue-like receptors activity (obsolete GO:0001615)","synonyms":[{"name":"thyrotropin releasing hormone and secretagogue-like receptors activity","type":"exact"}],"termid":"GO:0001615"}


id: PBO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 5","termid":"PBO:0050149"}


id: FYPO:0006144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gluconate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular gluconate level","synonyms":[{"name":"decreased cellular gluconate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular gluconate level during vegetative growth","type":"exact"},{"name":"decreased gluconate accumulation","type":"related"},{"name":"reduced cellular gluconate level","type":"exact"}],"termid":"FYPO:0006144"}


id: PBO:0089955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta (WD repeat) subunit Git5","termid":"PBO:0089955"}


id: GO:0040002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen and cuticulin-based cuticle development","synonyms":[{"name":"collagen and cuticulin-based cuticle anabolism","type":"exact"},{"name":"collagen and cuticulin-based cuticle biosynthetic process","type":"exact"},{"name":"collagen and cuticulin-based cuticle formation","type":"exact"},{"name":"collagen and cuticulin-based cuticle synthesis","type":"exact"}],"termid":"GO:0040002"}


id: PBO:0041623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding tyrosine phosphorylation regulated","termid":"PBO:0041623"}


id: PBO:0074666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 52","termid":"PBO:0074666"}


id: FYPO:0002348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly does not occur.","definition_xrefs":["PomBase:mah","PMID:21098141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished stress granule assembly during vegetative growth","synonyms":[{"name":"abolished cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abolished stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abolished stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002348"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30003614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: PBO:0061933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 4","termid":"PBO:0061933"}


id: PBO:0004624
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.4","termid":"PBO:0004624"}


id: MONDO:1010754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sparse hair and dental aplasia in dogs associated with a variation in the EDA gene.","definition_xrefs":["OMIA:000543-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia, non-human animal","termid":"MONDO:1012576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked hypohidrotic ectodermal dysplasia, EDA-related, dog","termid":"MONDO:1010754","xrefs":{"Monarch":{"xref_id":"1010754"}}}


id: GO:0006614
data:
  {"annotated_genes":["SJAG_02208","SJAG_00959","SJAG_03411","SJAG_01558","SJAG_01759","SJAG_01282","SJAG_02330","SJAG_01840","SJAG_00175","SJAG_02456","SJAG_03684","SJAG_00064","SJAG_00360","SJAG_04129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66605,69337,70318,73360,94641],"is_not":false,"summary":null,"term":"GO:0006614"},{"annotations":[114758,115522,91988],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[102946,75786,73556,74049,108692,98409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cotranslational protein targeting to membrane","termid":"GO:0006613"},{"relation_name":"is_a","term_name":"protein targeting to ER","termid":"GO:0045047"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01282":null,"SJAG_01558":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1799339"],"synonyms":[{"name":"ER translocation","type":"broad"},{"name":"SRP-dependent cotranslational membrane targeting","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting","type":"exact"}],"termid":"GO:0006614","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null}}


id: MONDO:0014480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 9","secondary_identifiers":["OMIM:616067","UMLS:C4015129","MEDGEN:863566","GARD:18361","DOID:0111770"],"synonyms":[{"name":"46,XY SEX reversal 9","type":"related"},{"name":"46,XY Sex reversal type 9","type":"exact"},{"name":"46,XY Sex reversal, Zfpm2-related","type":"related"},{"name":"46,XY sex reversal 9","type":"exact"},{"name":"46XY sex reversal 9","type":"exact"},{"name":"SRXY9","type":"related"}],"termid":"MONDO:0014480","xrefs":{"Monarch":{"xref_id":"0014480"}}}


id: FYPO:0007049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to zinc ion","termid":"FYPO:0001546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during stress response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to excess zinc","type":"exact"},{"name":"decreased RNA level during cellular response to high zinc level","type":"exact"},{"name":"decreased RNA level during cellular response to replete zinc","type":"related"},{"name":"decreased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased RNA level during response to zinc ion stress","type":"exact"},{"name":"decreased RNA level during response to zinc toxicity","type":"related"},{"name":"decreased RNA level during stress response to zinc","type":"exact"},{"name":"decreased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"decreased transcript level during stress response to zinc ion","type":"exact"},{"name":"reduced RNA level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007049"}


id: PBO:0074886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63B","termid":"PBO:0074886"}


id: PBO:0017512
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis","termid":"PBO:0017512"}


id: PBO:0085886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in invasive and pseudohyphal growth; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085886"}


id: PBO:0074394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 3","termid":"PBO:0074394"}


id: PBO:0067211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 277, pseudogene","termid":"PBO:0067211"}


id: MONDO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stromal corneal dystrophy that is caused by mutation(s) in the TGFBI gene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal granular dystrophy","secondary_identifiers":["MEDGEN:42290","ICD10CM:H18.53","DOID:12318","ICD9:371.53","NCIT:C34651","UMLS:C0018179","SCTID:45283008"],"synonyms":[{"name":"granular corneal dystrophy","type":"exact"}],"termid":"MONDO:0001490","xrefs":{"Monarch":{"xref_id":"0001490"}}}


id: PBO:0041248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 146","termid":"PBO:0041248"}


id: MONDO:1010878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in cats due to a mutation in the GM2A gene. There is a buildup of G(M2) gangliosides in tissues. It is characterised by progressive neuromuscular dysfunction.","definition_xrefs":["PMID:16200419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, domestic cat","termid":"MONDO:1010841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, GM2A-related, domestic cat","secondary_identifiers":["OMIA:001427-9685"],"synonyms":[{"name":"gangliosidosis, GM2, GM2A, (AB variant) domestic cat","type":"related"}],"termid":"MONDO:1010878","xrefs":{"Monarch":{"xref_id":"1010878"}}}


id: GO:0072287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric distal tubule are generated and organized. The metanephric distal tubule is a metanephric nephron tubule that begins at the macula densa and extends to the metanephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"is_a","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}


id: GO:0072004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of regions of the embryo into the area in which the kidney rudiment will develop.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"kidney rudiment formation","termid":"GO:0072003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney field specification","synonyms":[{"name":"specification of kidney anlage","type":"related"}],"termid":"GO:0072004"}


id: GO:1990233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["PMID:16540464","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intramolecular phosphotransferase complex","termid":"GO:1990233"}


id: PBO:0027028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_meiotic_cell_cycle","termid":"PBO:0027028"}


id: PBO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase (predicted)","termid":"PBO:0002028"}


id: GO:0050342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-tocopherol + S-adenosyl-L-methionine = (+)-alpha-tocopherol + H+ + S-adenosyl-L-homocysteine. This reaction can also use delta-tocopherol, gamma-tocotrienol and delta-tocotrienol as substrates.","definition_xrefs":["EC:2.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tocopherol C-methyltransferase activity","secondary_identifiers":["MetaCyc:TOCOPHEROL-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:gamma-tocopherol 5-O-methyltransferase activity","type":"related"},{"name":"gamma-tocopherol methyltransferase activity","type":"exact"},{"name":"tocopherol O-methyltransferase activity","type":"exact"}],"termid":"GO:0050342"}


id: PBO:0064545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 7 pseudogene","termid":"PBO:0064545"}


id: MONDO:0017237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensorimotor neuropathy with hyperelastic skin","secondary_identifiers":["GARD:11010","icd11.foundation:691133799","UMLS:C5190690","MEDGEN:1678654","Orphanet:280598"],"termid":"MONDO:0017237","xrefs":{"Monarch":{"xref_id":"0017237"}}}


id: PR:Q9C1W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mim1 gene.","definition_xrefs":["UniProtKB:Q9C1W7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.08","synonyms":[{"name":"Spom972h-mim1","type":"exact"}],"termid":"PR:Q9C1W7"}


id: PBO:0051827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2 binding protein like","termid":"PBO:0051827"}


id: GO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CD80, a CD marker that occurs on antigen presenting cells such as activated B cells and monocytes that provides a co-stimulatory signal necessary for T cell activation and survival.","definition_xrefs":["GOC:ebc","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete CD80 biosynthetic process (obsolete GO:0035780)","synonyms":[{"name":"CD80 anabolism","type":"exact"},{"name":"CD80 biosynthesis","type":"exact"},{"name":"CD80 formation","type":"exact"},{"name":"CD80 synthesis","type":"exact"}],"termid":"GO:0035780"}


id: PBO:0088721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase","termid":"PBO:0088721"}


id: GO:1905204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of connective tissue replacement.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:bc","GO_REF:0000058","PMID:25590961","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"negatively_regulates","term_name":"connective tissue replacement","termid":"GO:0097709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue replacement","synonyms":[{"name":"down regulation of connective tissue replacement","type":"exact"},{"name":"down-regulation of connective tissue replacement","type":"exact"},{"name":"downregulation of connective tissue replacement","type":"exact"},{"name":"inhibition of connective tissue replacement","type":"narrow"}],"termid":"GO:1905204"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: PBO:0056312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 6","termid":"PBO:0056312"}


id: PBO:0056747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit","termid":"PBO:0056747"}


id: PBO:0078743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 5","termid":"PBO:0078743"}


id: MONDO:0011621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-pectoral syndrome is characterized by a combination of distal limb abnormalities (syndactyly of all fingers and toes, preaxial polydactyly in the feet and/or hands) and upper sternum malformations. It has been described in 22 patients from a six-generation Turkish family. It is transmitted as an autosomal dominant trait and the causative gene is located at 7q36.","definition_xrefs":["Orphanet:85203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acropectoral syndrome","secondary_identifiers":["OMIM:605967","MESH:C535664","MEDGEN:342975","SCTID:720412009","GARD:8485","icd11.foundation:1060723089","UMLS:C1853812"],"synonyms":[{"name":"ACRP syndrome","type":"exact"},{"name":"ACRPS","type":"related"},{"name":"Dundar Acropectoral syndrome","type":"related"},{"name":"acro-pectoral syndrome","type":"related"},{"name":"acropectoral syndrome","type":"exact"},{"name":"syndactyly, preaxial polydactyly and sternal deformity","type":"related"},{"name":"syndactyly, preaxial polydactyly, and sternal deformity","type":"related"},{"name":"syndactyly-preaxial polydactyly-sternal deformity syndrome","type":"exact"}],"termid":"MONDO:0011621","xrefs":{"Monarch":{"xref_id":"0011621"}}}


id: PBO:0074112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 4","termid":"PBO:0074112"}


id: GO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transmembrane transporter activity (obsolete GO:0042971)","termid":"GO:0042971"}


id: PBO:0086908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; member of the PQ-loop family, with seven transmembrane domains; similar to mammalian PQLC2 vacuolar transporter; YPQ1 has a paralog, RTC2, that arose from the whole genome duplication","termid":"PBO:0086908"}


id: FYPO:0001566
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular citrulline level","synonyms":[{"name":"increased cellular L-citrulline level","type":"exact"},{"name":"increased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"increased cellular citrulline level during vegetative growth","type":"exact"},{"name":"increased citrulline accumulation","type":"related"}],"termid":"FYPO:0001566"}


id: GO:0007063
data:
  {"annotated_genes":["SJAG_01825","SJAG_00369","SJAG_00433","SJAG_05978","SJAG_01716","SJAG_00823","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101200],"is_not":false,"summary":null,"term":"GO:0007063"},{"annotations":[106636,115730,106732,92100,107777,106954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[107779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045876"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00433":null,"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007063","terms_by_termid":{"GO:0007063":null,"GO:0045875":null,"GO:0045876":null}}


id: GO:0052681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate.","definition_xrefs":["RHEA:25436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"alpha-bisabolene synthase activity","secondary_identifiers":["EC:4.2.3.38","MetaCyc:RXN-8550","KEGG_REACTION:R08370"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(E)-alpha-bisabolene-forming] activity","type":"exact"},{"name":"bisabolene synthase activity","type":"broad"}],"termid":"GO:0052681"}


id: PBO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoglycerate_mutase_activity","termid":"PBO:0030066"}


id: PBO:0062386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 5 pseudogene","termid":"PBO:0062386"}


id: PBO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034572"}


id: PBO:0085329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol synthase; required for biosynthesis of phosphatidylinositol, which is a precursor for polyphosphoinositides, sphingolipids, and glycolipid anchors for some of the plasma membrane proteins","termid":"PBO:0085329"}


id: GO:0009451
data:
  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lse,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"},{"annotations":[100940,80113,119172,114360,72840,110537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[94288,88614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[72731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002101"},{"annotations":[90036,96154,98945,98944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002099"},{"annotations":[117591,74594,74488,77901,107257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"},{"annotations":[88140,96416,105927,119040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002098"},{"annotations":[98208,103255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"},{"annotations":[75095,95063,74071,72656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within an RNA molecule to produce an RNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:go_curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"},{"relation_name":"is_a","term_name":"macromolecule 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modification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:RNA_editing","GO:0016547"],"synonyms":[{"name":"RNA editing","type":"narrow"}],"termid":"GO:0009451","terms_by_termid":{"GO:0000452":null,"GO:0000454":null,"GO:0000455":null,"GO:0001522":null,"GO:0002098":null,"GO:0002099":null,"GO:0002100":null,"GO:0002101":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002143":null,"GO:0002926":null,"GO:0002939":null,"GO:0002940":null,"GO:0002943":null,"GO:0002946":null,"GO:0002949":null,"GO:0006400":null,"GO:0019988":null,"GO:0030488":null,"GO:0031118":null,"GO:0031119":null,"GO:0031120":null,"GO:0031167":null,"GO:0031591":null,"GO:0036261":null,"GO:0051391":null,"GO:0061504":null,"GO:0070475":null,"GO:0070476":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0106004":null,"GO:0106005":null,"GO:0106217":null,"GO:0120049":null,"GO:1904812":null,"GO:1990481":null,"GO:1990799":null,"GO:1990983":null}}


id: GO:0043940
data:
  {"annotated_genes":["SJAG_04140","SJAG_02169","SJAG_00993","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[102651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[91085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[92548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation","termid":"GO:0034306"},{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043940","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0074489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 1","termid":"PBO:0074489"}


id: PBO:0062799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OS9 endoplasmic reticulum lectin","termid":"PBO:0062799"}


id: PBO:0052732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 24","termid":"PBO:0052732"}


id: PBO:0066931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 233","termid":"PBO:0066931"}


id: PBO:0011147
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homologue of Parp Zn finger","termid":"PBO:0011147"}


id: MONDO:0009867
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86598],"is_not":false,"summary":null,"term":"MONDO:0009867"}]},"cv_name":"mondo","definition":"Any glycogen storage disease in which the cause of the disease is a mutation in the PRKAG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"PRKAG2-related cardiomyopathy","termid":"MONDO:0800484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"lethal congenital glycogen storage disease of heart","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10EXP:G73.6*","Orphanet:439854","ICD10EXP:E74.0+","MEDGEN:337919","DOID:0090101","UMLS:C1849813","OMIM:261740","GARD:10728","MESH:C564888"],"synonyms":[{"name":"PRKAG2 glycogen storage disease","type":"exact"},{"name":"fatal congenital hypertrophic cardiomyopathy due to GSD","type":"exact"},{"name":"fatal congenital hypertrophic cardiomyopathy due to glycogen storage disease","type":"related"},{"name":"fatal congenital hypertrophic cardiomyopathy due to glycogenosis","type":"exact"},{"name":"fatal congenital nonlysosomal cardiac glycogenosis","type":"exact"},{"name":"glycogen storage disease caused by mutation in PRKAG2","type":"exact"},{"name":"glycogen storage disease of heart","type":"related"},{"name":"glycogen storage disease of heart, lethal congenital","type":"related"},{"name":"phosphorylase kinase deficiency of heart","type":"exact"}],"termid":"MONDO:0009867","terms_by_termid":{"MONDO:0009867":null},"xrefs":{"Monarch":{"xref_id":"0009867"}}}


id: GO:0044795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, in membrane-bounded vesicles, from the trans-Golgi network to the recycling endosomes.","definition_xrefs":["PMID:18779367","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"trans-Golgi network to recycling endosome transport","termid":"GO:0044795"}


id: PBO:0062214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AL member 1 (gene/pseudogene)","termid":"PBO:0062214"}


id: MONDO:0054867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastroschisis","termid":"MONDO:0009264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraomphalocele","secondary_identifiers":["MEDGEN:419800","MESH:C537170","GARD:4218","UMLS:C2931431"],"synonyms":[{"name":"Paraomphalocele, epigastric","type":"related"},{"name":"Paraomphalocele, hypogastric","type":"related"}],"termid":"MONDO:0054867","xrefs":{"Monarch":{"xref_id":"0054867"}}}


id: PBO:0085369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific phosphatase; major role in osmolarity sensing through dephosphorylation of the Hog1p MAPK with a minor role by Ptp3p; inactivates and regulates Hog1p localization; major role in the cell wall integrity pathway through dephosphorylation of MAPK Slt2p with a minor role by Ptp3p; minor role with Msg5p in the pheromone adaptive response through dephosphorylation of MAPK Fus3p with major role by Ptp3p; co-regulates the calcium signaling pathway with Msg5p; nuclear localized","termid":"PBO:0085369"}


id: MONDO:0019909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 16 is characterized bypostnatal growthdeficiency, intellectual disability, microcephaly, broad flat nasal bridge, down-turned mouth, low-set and dysmorphic (abnormally-shaped) ears and speech delay.To date, less than 10 cases have been reported in the medical literature.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 16","secondary_identifiers":["SCTID:763406004","UMLS:C4706449","MEDGEN:1641955","GARD:10855","Orphanet:96178"],"synonyms":[{"name":"R16","type":"related"},{"name":"Ring 16","type":"related"},{"name":"Ring chromosome 16 syndrome","type":"related"},{"name":"Ring chromosome type 16","type":"exact"},{"name":"chromosome 16 ring","type":"related"}],"termid":"MONDO:0019909","xrefs":{"Monarch":{"xref_id":"0019909"}}}


id: PBO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 4","termid":"PBO:0051842"}


id: PR:Q9P7F2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.04","synonyms":[{"name":"Spom972h-cao1","type":"exact"}],"termid":"PR:Q9P7F2"}


id: MONDO:0012779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 10","secondary_identifiers":["OMIM:612008","UMLS:C2677604","MEDGEN:394326"],"synonyms":[{"name":"CELIAC10","type":"exact"},{"name":"celiac disease, susceptibility to, 10","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 10","type":"related"}],"termid":"MONDO:0012779","xrefs":{"Monarch":{"xref_id":"0012779"}}}


id: GO:0008668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + ATP + holo-[ACP] = 2,3-dihydroxybenzoyl-[ACP] + AMP + diphosphate.","definition_xrefs":["RHEA:61652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate--[aryl-carrier protein] ligase","secondary_identifiers":["EC:6.2.1.71","MetaCyc:RXN-19445","KEGG_REACTION:R12777"],"synonyms":[{"name":"(2,3-dihydroxybenzoyl)adenylate synthase activity","type":"narrow"},{"name":"2,3-dihydroxybenzoate-AMP ligase activity","type":"narrow"}],"termid":"GO:0008668"}


id: GO:2000918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000918"}


id: PBO:0056695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific with OB-fold","termid":"PBO:0056695"}


id: GO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of methionine adenosyltransferase.","definition_xrefs":["GOC:jid","PMID:10644686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"methionine adenosyltransferase regulator activity","synonyms":[{"name":"MAT regulator activity","type":"exact"}],"termid":"GO:0048270"}


id: GO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + D-glutamine = gamma-D-glutamyl-D-glutamate + NH4+. Can also transfer additional glutamyl residues to a peptide, extending the polypeptide chain.","definition_xrefs":["EC:2.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"D-glutamyltransferase activity","secondary_identifiers":["RHEA:35623","MetaCyc:D-GLUTAMYLTRANSFERASE-RXN"],"synonyms":[{"name":"D-gamma-glutamyl transpeptidase activity","type":"related"},{"name":"D-glutamyl transpeptidase activity","type":"related"},{"name":"glutamine:D-glutamyl-peptide 5-glutamyltransferase activity","type":"related"}],"termid":"GO:0047823"}


id: SO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone that is invalid.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated","termid":"SO:0000790"},{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_cDNA_clone","synonyms":[{"name":"invalidated cDNA clone","type":"exact"}],"termid":"SO:0000809"}


id: MONDO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy with microcephaly and mental subnormality","secondary_identifiers":["MESH:C564806","MEDGEN:1856346","UMLS:C5935682","OMIM:271110"],"synonyms":[{"name":"spinal muscular atrophy with microcephaly and mental subnormality","type":"exact"}],"termid":"MONDO:0010055","xrefs":{"Monarch":{"xref_id":"0010055"}}}


id: PBO:0046944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member A","termid":"PBO:0046944"}


id: GO:0060498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands contributing to the formation of the primary lung bud.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in lung bud formation (obsolete GO:0060498)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in lung bud formation","type":"exact"}],"termid":"GO:0060498"}


id: GO:1990180
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997","SJAG_02288","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70525,80710,88085,118316],"is_not":false,"summary":null,"term":"GO:1990180"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA in the mitochondrion.","definition_xrefs":["PMID:23928301","GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"tRNA 3'-end processing","termid":"GO:0042780"},{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing in mitochondria","type":"exact"},{"name":"tRNA 3' processing in mitochondrion","type":"exact"},{"name":"tRNA 3'-end processing in mitochondria","type":"exact"}],"termid":"GO:1990180","terms_by_termid":{"GO:1990180":null}}


id: GO:0017076
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id: PBO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase, poly(A)-specific ribonuclease complex subunit Pan2 (predicted)","termid":"PBO:0000563"}


id: PBO:0061858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 2B","termid":"PBO:0061858"}


id: PBO:0028808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028808"}


id: GO:0061891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of calcium ions (Ca2+).","definition_xrefs":["PMID:17020874","PMID:16005298","PMID:28151650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0003674"],"is_obsolete":false,"name":"calcium ion sensor activity","termid":"GO:0061891"}


id: PBO:0061768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 3","termid":"PBO:0061768"}


id: GO:1901637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of presynaptic active zone structure (obsolete GO:1901637)","synonyms":[{"name":"activation of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"positive regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"upregulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901637"}


id: MONDO:0003864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An indolent, mature B-cell neoplasm composed of small, round B-lymphocytes. When the bone marrow and peripheral blood are involved, the term chronic lymphocytic leukemia is used. The term small lymphocytic lymphoma is restricted to cases which do not show leukemic involvement of the bone marrow and peripheral blood.","definition_xrefs":["NCIT:C27911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","secondary_identifiers":["ICDO:9823/3","ONCOTREE:CLLSLL","DOID:6354","UMLS:C1302547","MEDGEN:224906"],"synonyms":[{"name":"CLL/SLL","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003864","xrefs":{"Monarch":{"xref_id":"0003864"}}}


id: GO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell activation involved in immune response","synonyms":[{"name":"cell activation during immune response","type":"related"}],"termid":"GO:0002263"}


id: GO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus regulating the process of conjugation without cellular fusion.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"cellular response to pheromone","termid":"GO:0071444"},{"relation_name":"regulates","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pheromone regulating conjugation with mutual genetic exchange","synonyms":[{"name":"response to pheromone triggering conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000756"}


id: MONDO:0008842
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85779],"is_not":false,"summary":null,"term":"MONDO:0008842"}]},"cv_name":"mondo","definition":"A rare autosomal recessive cerebellar ataxia (ARCA), characterized by progressive cerebellar ataxia associated with oculomotor apraxia, severe neuropathy, and hypoalbuminemia.","definition_xrefs":["Orphanet:1168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ataxia-telangiectasia-like disorder","termid":"MONDO:0011457"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050754","MEDGEN:395301","GARD:9283","UMLS:C1859598","OMIM:208920","NANDO:1200051","MESH:C538013"],"synonyms":[{"name":"AOA1","type":"exact"},{"name":"APTX oculomotor apraxia or related oculomotor disease","type":"exact"},{"name":"EAOH","type":"related"},{"name":"EOCA-HA","type":"related"},{"name":"ataxia with oculomotor apraxia type 1","type":"exact"},{"name":"ataxia, adult-onset, with oculomotor apraxia","type":"related"},{"name":"ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia","type":"exact"},{"name":"ataxia-oculomotor apraxia 1","type":"related"},{"name":"ataxia-oculomotor apraxia syndrome","type":"related"},{"name":"ataxia-oculomotor apraxia type 1","type":"related"},{"name":"ataxia-telangiectasia-like syndrome","type":"related"},{"name":"cerebellar ataxia, early-onset, with hypoalbuminemia","type":"related"},{"name":"early-onset ataxia with oculomotor apraxia and hypoalbuminemia","type":"related"},{"name":"early-onset cerebellar ataxia with hypoalbuminemia","type":"related"},{"name":"oculomotor apraxia or related oculomotor disease caused by mutation in APTX","type":"exact"}],"termid":"MONDO:0008842","terms_by_termid":{"MONDO:0008842":null},"xrefs":{"Monarch":{"xref_id":"0008842"}}}


id: PBO:0086704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may contribute to cell wall biosynthesis, mutants display zymolyase hypersensitivity","termid":"PBO:0086704"}


id: PBO:0067850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 152","termid":"PBO:0067850"}


id: FYPO:0005050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is decreased when the cell is subject to nitrogen starvation. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding during cellular response to nitrogen starvation","synonyms":[{"name":"decreased chromatin binding during cellular response to nitrogen depletion","type":"exact"},{"name":"decreased chromatin binding during cellular response to nitrogen deprivation","type":"exact"},{"name":"reduced chromatin binding during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005050"}


id: PBO:0049086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 141B, pseudogene","termid":"PBO:0049086"}


id: FYPO:0005065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005065"}


id: PBO:0034618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_II_metaphase/anaphase_transition_delay","termid":"PBO:0034618"}


id: PBO:0069428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 693, pseudogene","termid":"PBO:0069428"}


id: GO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-4 production","secondary_identifiers":["GO:0150133","GO:0045402"],"synonyms":[{"name":"regulation of IL-4 production","type":"exact"},{"name":"regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032673"}


id: PBO:0045413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA4 pseudogene 2","termid":"PBO:0045413"}


id: MONDO:1012939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic disease characterized by perinatal mortality that occurs in cattle due to a mutation in the GCK gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal mortality syndrome, GCK-related, cattle","secondary_identifiers":["OMIA:002579-9913"],"termid":"MONDO:1012939","xrefs":{"Monarch":{"xref_id":"1012939"}}}


id: MONDO:0019294
data:
  {"annotated_genes":["SJAG_04008","SJAG_03846","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007145"},{"annotations":[86319,86320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_03846":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mixed dermis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681484","MEDGEN:1842502","Orphanet:79380"],"termid":"MONDO:0019294","terms_by_termid":{"MONDO:0007145":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0019294"}}}


id: PBO:0062761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily P member 1 (gene/pseudogene)","termid":"PBO:0062761"}


id: PBO:0055332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2760","termid":"PBO:0055332"}


id: PATO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's having two copies (homologs) of each chromosome, usually one from the mother and one from the father.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Diploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diploid","termid":"PATO:0001394"}


id: PBO:0044949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 5","termid":"PBO:0044949"}


id: PR:O74890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04935","PANTHER:PTHR11766:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.06c","secondary_identifiers":["UniProtKB:O74890"],"synonyms":[{"name":"Spom972h-YARS2","type":"exact"},{"name":"TyrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyrosyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74890"}


id: PBO:0091942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine-aldehyde dehydrogenase Atd3","termid":"PBO:0091942"}


id: GO:1902849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neuronal signal transduction","termid":"GO:1902847"},{"relation_name":"positively_regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neuronal signal transduction","synonyms":[{"name":"activation of neuronal signal transduction","type":"narrow"},{"name":"up regulation of neuronal signal transduction","type":"exact"},{"name":"up-regulation of neuronal signal transduction","type":"exact"},{"name":"upregulation of neuronal signal transduction","type":"exact"}],"termid":"GO:1902849"}


id: RO:HOM0000026
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and its ortholog in species B, when duplications more recent than the species split have occurred in species A but not in species B.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_semi-orthology_relationship_with","synonyms":[{"name":"semi-orthologous to","type":"exact"}],"termid":"RO:HOM0000026"}


id: GO:0007343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the egg becomes metabolically active, initiates protein and DNA synthesis and undergoes structural changes to its cortex and/or cytoplasm.","definition_xrefs":["GOC:bf","PMID:9630751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg activation","secondary_identifiers":["Wikipedia:Egg_activation"],"termid":"GO:0007343"}


id: MONDO:0020100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hemolytic anemia.","gene_count":0,"genotype_count":0,"name":"obsolete rare hemolytic anemia (obsolete MONDO:0020100)","secondary_identifiers":["Orphanet:98363"],"synonyms":[{"name":"rare hemolytic anemia","type":"exact"}],"termid":"MONDO:0020100","xrefs":{"Monarch":{"xref_id":"0020100"}}}


id: GO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGMP biosynthetic process","synonyms":[{"name":"dGMP anabolism","type":"exact"},{"name":"dGMP biosynthesis","type":"exact"},{"name":"dGMP formation","type":"exact"},{"name":"dGMP synthesis","type":"exact"}],"termid":"GO:0006181"}


id: GO:0070152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA in a mitochondrion, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucyl-tRNA aminoacylation","termid":"GO:0006428"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0006399","GO:0010467","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial isoleucyl-tRNA aminoacylation","termid":"GO:0070152"}


id: GO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon catabolic process","synonyms":[{"name":"halogenated hydrocarbon breakdown","type":"exact"},{"name":"halogenated hydrocarbon catabolism","type":"exact"},{"name":"halogenated hydrocarbon degradation","type":"exact"}],"termid":"GO:0042206"}


id: MONDO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lujo hemorrhagic fever (obsolete MONDO:0000285)","termid":"MONDO:0000285","xrefs":{"Monarch":{"xref_id":"0000285"}}}


id: GO:0007439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ectodermal digestive tract over time, from its formation to the mature structure. The ectodermal digestive tract includes those portions that are derived from ectoderm.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal digestive tract development","synonyms":[{"name":"ectodermal gut development","type":"related"}],"termid":"GO:0007439"}


id: GO:0022020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of medial ganglionic eminence cells, resulting in the expansion of a cell population.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medial ganglionic eminence cell proliferation","termid":"GO:0022020"}


id: PBO:0053024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3","termid":"PBO:0053024"}


id: MONDO:0006975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant myomatous neoplasm arising from smooth muscle.","definition_xrefs":["NCIT:C3751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myomatous neoplasm","termid":"MONDO:0021545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle tumor","secondary_identifiers":["EFO:1001185","DOID:4310","MESH:D018235","UMLS:C0206658","MEDGEN:104911"],"synonyms":[{"name":"neoplasm of smooth muscle","type":"exact"},{"name":"neoplasm of the smooth muscle","type":"exact"},{"name":"smooth muscle neoplasm","type":"exact"},{"name":"smooth muscle tumor","type":"exact"},{"name":"tumor of smooth muscle","type":"exact"},{"name":"tumor of the smooth muscle","type":"exact"},{"name":"tumour of smooth muscle","type":"exact"},{"name":"tumour of the smooth muscle","type":"exact"}],"termid":"MONDO:0006975","xrefs":{"Monarch":{"xref_id":"0006975"}}}


id: PBO:0073281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 2","termid":"PBO:0073281"}


id: PBO:0041243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 116","termid":"PBO:0041243"}


id: _global:process_has_causal_agent
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Inverse of 'causal agent in process'","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"process_has_causal_agent","secondary_identifiers":["RO:0002608"],"termid":"_global:process_has_causal_agent"}


id: MONDO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery occlusion","secondary_identifiers":["ICD9:433.20","SCTID:195182007","ICD9:433.21","UMLS:C0265104","MEDGEN:539080","ICD10CM:I65.0","ICD9:433.2","DOID:11299"],"synonyms":[{"name":"occlusion and stenosis of vertebral artery","type":"exact"},{"name":"vertebral artery occlusion","type":"exact"},{"name":"vertebrobasial artery occlusion","type":"related"}],"termid":"MONDO:0001258","xrefs":{"Monarch":{"xref_id":"0001258"}}}


id: PBO:0056712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 4","termid":"PBO:0056712"}


id: PBO:0067817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 119","termid":"PBO:0067817"}


id: PBO:0114491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane flippase required for the translocation of Man5GlcNac2-PP-Dol; catalyzes the translocation of the lipid-linked oligosaccharide Man5GlcNac2-PP-Dol across the ER lipid bilayer from the cytoplasmic face to the lumen; mutation is suppressed by expression of human p53 protein; human ortholog RFT1 complements the yeast null mutant","termid":"PBO:0114491"}


id: PomGeneEx:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at levels that vary under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluctuates","termid":"PomGeneEx:0000008"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level fluctuates","synonyms":[{"name":"RNA expression fluctuates","type":"exact"},{"name":"fluctuating RNA level","type":"exact"}],"termid":"PomGeneEx:0000017"}


id: PBO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1","termid":"PBO:0050296"}


id: MONDO:0859316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron overload, susceptibility to","secondary_identifiers":["UMLS:C5703292","MEDGEN:1814970","OMIM:620121"],"termid":"MONDO:0859316","xrefs":{"Monarch":{"xref_id":"0859316"}}}


id: PBO:0072626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 1","termid":"PBO:0072626"}


id: MONDO:0015427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal dyskinesia (PD) is a rare heterogenous group of movement disorders manifesting as abnormal involuntary movements that recur episodically and last only a brief time. PD includes paroxysmal kinesigenic dyskinesia (PKD), paroxysmal non-kinesigenic dyskinesia (PNKD), paroxysmal exertion-induced dyskinesia (PED) and a variant form of PKD, infantile convulsion and choreoathetosis (ICCA syndrome).","definition_xrefs":["Orphanet:1431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"paroxysmal dyskinesia","secondary_identifiers":["MEDGEN:156242","SCTID:49949003","MESH:D002819","UMLS:C0752210","GARD:18721","ICD9:333.5"],"synonyms":[{"name":"paroxysmal choreoathetosis","type":"exact"},{"name":"paroxysmal dystonic choreoathetosis","type":"exact"}],"termid":"MONDO:0015427","xrefs":{"Monarch":{"xref_id":"0015427"}}}


id: GO:0004384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + GMP = ADP + GDP, associated with the cell membrane.","definition_xrefs":["EC:2.7.4.8"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane-associated guanylate kinase (obsolete GO:0004384)","synonyms":[{"name":"MAGUK","type":"exact"},{"name":"membrane-associated guanylate kinase","type":"exact"}],"termid":"GO:0004384"}


id: PBO:0026842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_swollen,_elongated_pear-shaped_cell","termid":"PBO:0026842"}


id: GO:1904196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22383759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of granulosa cell proliferation","termid":"GO:1904195"},{"relation_name":"negatively_regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell proliferation","synonyms":[{"name":"down regulation of granulosa cell proliferation","type":"exact"},{"name":"down-regulation of granulosa cell proliferation","type":"exact"},{"name":"downregulation of granulosa cell proliferation","type":"exact"},{"name":"inhibition of granulosa cell proliferation","type":"narrow"}],"termid":"GO:1904196"}


id: GO:0140474
data:
  {"annotated_genes":["SJAG_03710","SJAG_01305","SJAG_03416","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91264,106226,107896,108025],"is_not":false,"summary":null,"term":"GO:0140474"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitochondrion and an ER membrane either via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:27875684","PMID:19556461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tether activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondrion membrane adaptor activity","type":"exact"},{"name":"ER-mitochondrion membrane tether activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane adaptor activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane tether activity","type":"exact"},{"name":"mitochondrion-ER membrane adaptor activity","type":"exact"},{"name":"mitochondrion-ER membrane tether activity","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum membrane adaptor activity","type":"exact"}],"termid":"GO:0140474","terms_by_termid":{"GO:0140474":null}}


id: MOD:01638
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces a glycine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine removal","termid":"MOD:01638"}


id: PBO:0002815
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cardiomyopathy","termid":"PBO:0002815"}


id: RO:HOM0000004
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves different underlying mechanisms or structures.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_convergence_relationship_with","synonyms":[{"name":"analogy","type":"related"}],"termid":"RO:HOM0000004"}


id: GO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine + H2O + O2 = glycolaldehyde + NH3 + H2O2.","definition_xrefs":["RHEA:18581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ethanolamine oxidase activity","secondary_identifiers":["EC:1.4.3.8","MetaCyc:ETHANOLAMINE-OXIDASE-RXN"],"synonyms":[{"name":"ethanolamine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047883"}


id: FYPO:0005095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to chromatin at replication origin","synonyms":[{"name":"abolished protein localisation to chromatin at replication origin during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at replication origin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005095"}


id: MONDO:0012891
data:
  {"annotated_genes":["SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87436],"is_not":false,"summary":null,"term":"MONDO:0012891"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the TSEN34 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005559"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15554","DOID:0060269","MESH:C567324","MEDGEN:382856","OMIM:612390","UMLS:C2676465"],"synonyms":[{"name":"PCH2C","type":"related"},{"name":"TSEN34 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in TSEN34","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2C","type":"related"}],"termid":"MONDO:0012891","terms_by_termid":{"MONDO:0012891":null},"xrefs":{"Monarch":{"xref_id":"0012891"}}}


id: PBO:0079996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 34","termid":"PBO:0079996"}


id: MONDO:0010349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the BMP15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 2","secondary_identifiers":["DOID:0080494","GARD:18040","DOID:0080861","MEDGEN:336903","MESH:C564499","OMIM:300510","UMLS:C1845294"],"synonyms":[{"name":"BMP15 primary ovarian failure","type":"exact"},{"name":"ODG2","type":"related"},{"name":"ovarian dysgenesis 2","type":"exact"},{"name":"ovarian dysgenesis type 2","type":"exact"},{"name":"ovarian dysgenesis, hypergonadotropic, X-linked","type":"related"},{"name":"ovarian failure, hypergonadotropic, due to ovarian dysgenesis","type":"related"},{"name":"premature ovarian failure 4","type":"related"},{"name":"primary ovarian failure caused by mutation in BMP15","type":"exact"}],"termid":"MONDO:0010349","xrefs":{"Monarch":{"xref_id":"0010349"}}}


id: GO:0051734
data:
  {"annotated_genes":["SJAG_01979","SJAG_02680","SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88481,71148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[93829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephosphopolynucleotide = ADP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["EC:2.7.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent polynucleotide kinase activity","type":"related"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051734","terms_by_termid":{"GO:0046404":null,"GO:0051736":null}}


id: SO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of ribosome entry site, specific to Eukaryotic organisms that overlaps part of both 5' UTR and CDS sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kozak_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Kozak_consensus_sequence"],"synonyms":[{"name":"kozak consensus","type":"exact"},{"name":"kozak consensus sequence","type":"exact"},{"name":"kozak sequence","type":"exact"}],"termid":"SO:0001647"}


id: FYPO:0001601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered level of substance in vacuole","synonyms":[{"name":"abnormal level of substance in vacuole","type":"exact"},{"name":"abnormal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar level of substance","type":"exact"},{"name":"altered level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"altered vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001601"}


id: GO:1905624
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-methionine import across plasma membrane.","definition_xrefs":["PMID:17556368","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-methionine import across plasma membrane","termid":"GO:1905544"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905624","terms_by_termid":{"GO:1905626":null}}


id: MOD:00974
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3'-chlorotyrosine","termid":"MOD:00974"}


id: PR:O74945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Tu GTP-binding domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04255","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.08c","secondary_identifiers":["UniProtKB:O74945"],"synonyms":[{"name":"EF-2 like GTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD1","type":"exact"},{"name":"elongation factor-like 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74945"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: MONDO:0017444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both lower leg and foot","secondary_identifiers":["icd11.foundation:835905199","MEDGEN:609276","Orphanet:294981","SCTID:278532000","UMLS:C0431991","GARD:21195","ICD10CM:Q72.2"],"synonyms":[{"name":"tibiofibular terminal transverse meromelia","type":"exact"}],"termid":"MONDO:0017444","xrefs":{"Monarch":{"xref_id":"0017444"}}}


id: GO:0046946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. Hydroxylysine is found in collagen and commonly has galactose and then glucose added sequentially by glycosyltransferases.","definition_xrefs":["ISBN:0198506732","PubChem_Compound:1029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"hydroxylysine metabolic process","synonyms":[{"name":"hydroxylysine metabolism","type":"exact"}],"termid":"GO:0046946"}


id: GO:0072284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the metanephric S-shaped body is generated and organized. The metanephric S-shaped body is the successor of the metanephric comma-shaped body that contributes to the morphogenesis of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-shaped body morphogenesis","termid":"GO:0072050"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric S-shaped body morphogenesis","termid":"GO:0072284"}


id: PBO:0014263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Serine Protease","termid":"PBO:0014263"}


id: PBO:0043346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caseinolytic mitochondrial matrix peptidase proteolytic subunit","termid":"PBO:0043346"}


id: GO:0097223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm part (obsolete GO:0097223)","termid":"GO:0097223"}


id: GO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of lysine, carried by a specialized lysine-accepting tRNA (possessing a CUA anticodon), to pyrrolysine (a lysine with an amide linkage to a (4R,5R)-4-substituted pyrroline-5-carboxylate).","definition_xrefs":["PMID:12121639","PMID:12029131","PMID:12029132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"conversion of lysyl-tRNA to pyrrolysyl-tRNA","termid":"GO:0001720"}


id: PBO:0086558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YLR365W is not an essential gene","termid":"PBO:0086558"}


id: SO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant present in the embryo that is carried by every cell in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germline_variant","synonyms":[{"name":"germline variant","type":"exact"}],"termid":"SO:0001778"}


id: PBO:0075324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2 pseudogene 1","termid":"PBO:0075324"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: PBO:0012578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 7 (predicted)","termid":"PBO:0012578"}


id: PBO:0034162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_parasitism","termid":"PBO:0034162"}


id: PBO:0002677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 7","termid":"PBO:0002677"}


id: PATO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000208 defensive function (obsolete PATO:0000208)","termid":"PATO:0000208"}


id: MONDO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute compression of the heart caused by increased intrapericardial pressure due to the collection of blood or fluid in the pericardium from rupture of the heart, penetrating trauma, or progressive effusion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardial effusion","termid":"MONDO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac tamponade","secondary_identifiers":["SCTID:35304003","icd11.foundation:216782575","EFO:1001285","NCIT:C50481","UMLS:C0007177","ICD10CM:I31.4","MESH:D002305","ICD9:423.3","MEDGEN:40108","DOID:115"],"synonyms":[{"name":"pericardial tamponade","type":"exact"},{"name":"rose's tamponade","type":"exact"}],"termid":"MONDO:0001297","xrefs":{"Monarch":{"xref_id":"0001297"}}}


id: PATO:0001664
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"soluble in","termid":"PATO:0001537"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased solubility","synonyms":[{"name":"low solubility","type":"exact"}],"termid":"PATO:0001664"}


id: PATO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed","termid":"PATO:0001630"}


id: GO:0080047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-galactose + phosphate = beta-L-galactose-1-phosphate + GDP.","definition_xrefs":["RHEA:27698","PMID:17462988","PMID:18463094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"GDP-L-galactose phosphorylase activity","secondary_identifiers":["EC:2.7.7.69","GO:0010475","MetaCyc:RXNQT-4141"],"synonyms":[{"name":"GDP:galactose-1-phosphate guanyltransferase activity","type":"exact"},{"name":"galactose-1-phosphate guanylyltransferase (GDP) activity","type":"exact"}],"termid":"GO:0080047"}


id: PBO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 1 pseudogene 2","termid":"PBO:0060821"}


id: MONDO:0010607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked visceral heterotaxy type 1 is a very rare form of heterotaxy that has only been reported in a few families. Heterotaxy is the right/left transposition of thoracic and/or abdominal organs. This condition is caused by mutations in the ZIC3 gene, is inherited in an X-linked recessive fashion, and is usually seen in males. Physical features include heart abnormalities such as dextrocardia, transposition of great vessels, ventricular septal defect, patent ductus arteriosus, pulmonic stenosis ; situs inversus, and missing (asplenia) and/or extra spleens (polysplenia).Affected individualscan also experience abnormalities in the development of the midline of the body, which can cause holoprosencephaly, myelomeningocele, urological anomalies, widely spaced eyes (hypertelorism), cleft palate, and abnormalities of the sacral spine and anus. Heterotaxia with recurrent respiratory infections are called primary ciliary dyskinesia.","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 1, X-linked","secondary_identifiers":["GARD:8591","UMLS:C1844020","MESH:C538116","MEDGEN:336609","OMIM:306955"],"synonyms":[{"name":"HTX1","type":"related"},{"name":"X-linked visceral heterotaxy 1","type":"related"},{"name":"ZIC3 visceral heterotaxy","type":"exact"},{"name":"congenital heart defects, multiple types, 1, X-linked","type":"related"},{"name":"congenital heart defects, nonsyndromic, 1, X-linked, X-linked recessive","type":"exact"},{"name":"dextrocardia with Other Cardiac malformations","type":"related"},{"name":"heterotaxy, visceral, 1, X-linked","type":"exact"},{"name":"heterotaxy, visceral, 1, X-linked, X-linked recessive","type":"exact"},{"name":"heterotaxy, visceral, X-linked","type":"related"},{"name":"laterality, X-linked","type":"related"},{"name":"situs inversus, Complex Cardiac defects, and splenic defects, X-linked","type":"related"},{"name":"visceral heterotaxy caused by mutation in ZIC3","type":"exact"}],"termid":"MONDO:0010607","xrefs":{"Monarch":{"xref_id":"0010607"}}}


id: PBO:0085464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication","termid":"PBO:0085464"}


id: GO:0061226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron in the mesonephros. The proximal/distal axis is defined by a line that runs from the glomerulus (proximal end) outward toward the mesonephric duct (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in mesonephric nephron development","termid":"GO:0061226"}


id: GO:0033068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of macrolides, any of a large group of polyketide compounds that contain a large lactone ring with few or no double bonds and no nitrogen atoms, linked glycosidically to one or more sugar groups. The macrolides include the carbomycins, the erythromycins, oleandomycin, oligomycins, and the spiramycins, and act as antibiotics, mainly against Gram-positive bacteria.","definition_xrefs":["ISBN:0198506732","PMID:17298179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"macrolide metabolic process","termid":"GO:0033067"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"macrolide biosynthetic process","synonyms":[{"name":"macrolide anabolism","type":"exact"},{"name":"macrolide biosynthesis","type":"exact"},{"name":"macrolide formation","type":"exact"},{"name":"macrolide synthesis","type":"exact"}],"termid":"GO:0033068"}


id: MONDO:0006353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the paranasal sinuses. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"paranasal sinus neoplasm","termid":"MONDO:0005289"},{"relation_name":"is_a","term_name":"glandular papilloma","termid":"MONDO:0021078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranasal sinus Schneiderian papilloma","secondary_identifiers":["UMLS:C1335343","MEDGEN:235462"],"synonyms":[{"name":"Schneiderian papilloma of accessory sinus","type":"related"},{"name":"Schneiderian papilloma of paranasal sinus","type":"related"},{"name":"Schneiderian papilloma of the accessory sinus","type":"related"},{"name":"Schneiderian papilloma of the paranasal sinus","type":"related"},{"name":"accessory sinus Schneiderian papilloma","type":"related"},{"name":"paranasal sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0006353","xrefs":{"Monarch":{"xref_id":"0006353"}}}


id: PBO:0068942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 185, pseudogene","termid":"PBO:0068942"}


id: MONDO:0014691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the SOS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"Noonan syndrome 9","secondary_identifiers":["OMIM:616559","UMLS:C4225282","DOID:0060587","GARD:16137","MEDGEN:896352","NCIT:C176937"],"synonyms":[{"name":"NS9","type":"exact"},{"name":"Noonan syndrome 9","type":"exact"},{"name":"Noonan syndrome caused by mutation in SOS2","type":"exact"},{"name":"Noonan syndrome type 9","type":"exact"},{"name":"SOS2 Noonan syndrome","type":"exact"}],"termid":"MONDO:0014691","xrefs":{"Monarch":{"xref_id":"0014691"}}}


id: PBO:0062905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive kinase 1","termid":"PBO:0062905"}


id: PBO:0116975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHR interacting HSP90 co-chaperone","termid":"PBO:0116975"}


id: MOD:01278
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:11283024","Unimod:253#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site K","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01278"}


id: PR:O94306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.19","synonyms":[{"name":"Spom972h-rpp21","type":"exact"}],"termid":"PR:O94306"}


id: GO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid induced by the interaction of gastrin with its receptor.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}


id: GO:0050440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oxaloacetate + propanoyl-CoA = (2R,3S)-2-methylcitrate + CoA + H+.","definition_xrefs":["RHEA:23780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"2-methylcitrate synthase activity","secondary_identifiers":["EC:2.3.3.5","MetaCyc:2-METHYLCITRATE-SYNTHASE-RXN","KEGG_REACTION:R00931"],"synonyms":[{"name":"2-methylcitrate oxaloacetate-lyase activity","type":"related"},{"name":"MCS activity","type":"related"},{"name":"methylcitrate synthase activity","type":"related"},{"name":"methylcitrate synthetase activity","type":"related"},{"name":"propanoyl-CoA:oxaloacetate C-propanoyltransferase (thioester-hydrolysing, 1-carboxyethyl-forming)","type":"related"}],"termid":"GO:0050440"}


id: GO:1990629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found as a homopentamer of the phospholamban (PLN) protein in the sarcoplasmic reticulum (SR) membrane of cardiomyocytes. Cardiac PLN is a main determinant of muscle contraction and relaxation, by regulating intracellular calcium levels.","definition_xrefs":["GOC:ame","PMID:16043693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005783","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"phospholamban complex","synonyms":[{"name":"cardiac PLB complex","type":"related"},{"name":"cardiac PLN complex","type":"related"},{"name":"cardiac phospholamban complex","type":"exact"}],"termid":"GO:1990629"}


id: GO:0004053
data:
  {"annotated_genes":["SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70887],"is_not":false,"summary":null,"term":"GO:0004053"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea.","definition_xrefs":["EC:3.5.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arginase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70569","RHEA:20569","Reactome:R-HSA-452036","MetaCyc:ARGINASE-RXN"],"synonyms":[{"name":"L-arginase activity","type":"related"},{"name":"L-arginine amidinohydrolase activity","type":"related"},{"name":"arginine amidinase activity","type":"related"},{"name":"arginine transamidinase activity","type":"related"},{"name":"canavanase activity","type":"related"}],"termid":"GO:0004053","terms_by_termid":{"GO:0004053":null}}


id: GO:0004415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4) linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.","definition_xrefs":["EC:3.2.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hyalurononglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-5693356","Reactome:R-HSA-9036077","Reactome:R-HSA-2160892","Reactome:R-HSA-2318585","MetaCyc:3.2.1.35-RXN","Reactome:R-HSA-2160874","Reactome:R-HSA-1793209"],"synonyms":[{"name":"chondroitinase I activity","type":"related"},{"name":"chondroitinase activity","type":"broad"},{"name":"hyaluronate 4-glycanohydrolase activity","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"hyaluronoglucosaminidase activity","type":"exact"},{"name":"hyaluronoglucosidase activity","type":"related"}],"termid":"GO:0004415"}


id: PBO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC21C3.07c is related to the C-terminal region of YOR239W","termid":"PBO:0004671"}


id: PBO:0077254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 5","termid":"PBO:0077254"}


id: PBO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli ispA","termid":"PBO:0018231"}


id: GO:0035859
data:
  {"annotated_genes":["SJAG_03907","SJAG_00824","SJAG_00561","SJAG_00209","SJAG_02765","SJAG_01184","SJAG_04496","SJAG_02424"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80301,73978,73957,88368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990130"},{"annotations":[88660,75805,106942,88369,89769],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A GTPase-activating protein (GAP) complex that regulates TORC1 signaling by interacting with the Rag GTPase. In S. cerevisiae the complex contains Seh1p, Sec13p, Npr2p, Npr3p, Iml1p, Mtc5p, Rtc1p, and Sea4p.","definition_xrefs":["PMID:21454883","GOC:jh","PMID:23974112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_02424":null,"SJAG_02765":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Seh1-associated complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GATOR complex","type":"exact"},{"name":"SEA complex","type":"exact"}],"termid":"GO:0035859","terms_by_termid":{"GO:0061700":null,"GO:1990130":null}}


id: PBO:0062453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 125 pseudogene","termid":"PBO:0062453"}


id: GO:0080109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetonitrile + H2O = indole-3-acetamide.","definition_xrefs":["MetaCyc:RXN-7567","PMID:12430025","PMID:11607511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile hydratase activity","termid":"GO:0018822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetonitrile nitrile hydratase activity","secondary_identifiers":["KEGG_REACTION:R04020"],"termid":"GO:0080109"}


id: GO:0051204
data:
  {"annotated_genes":["SJAG_01917","SJAG_05302","SJAG_01405","SJAG_03633","SJAG_05300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78912,78653,58362,78863,74808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein localization to mitochondrion","termid":"GO:0070585"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"protein insertion into mitochondrial membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"integral mitochondrial membrane protein localization","type":"exact"},{"name":"integral mitochondrial membrane protein positioning","type":"exact"},{"name":"localization of protein in mitochondrial membrane","type":"exact"},{"name":"positioning of protein in mitochondrial membrane","type":"exact"},{"name":"protein insertion into mitochondrion membrane","type":"exact"},{"name":"protein-mitochondrial membrane insertion","type":"exact"},{"name":"protein-mitochondrion membrane insertion","type":"exact"}],"termid":"GO:0051204","terms_by_termid":{"GO:0032979":null}}


id: MONDO:0009221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Femur-fibula-ulna (FFU) complex is a non-lethal congenital anomaly of unknown etiology, more frequently reported in males than females, characterized by a highly variable combination of defects of the femur, fibula, and/or ulna, with striking asymmetry, including absence of the proximal part of the femur, absence of the fibula and malformation of the ulnar side of the upper limb. Axial skeleton, internal organs and intellectual function are usually normal.","definition_xrefs":["Orphanet:2019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"femur-fibula-ulna complex","secondary_identifiers":["OMIM:228200","GARD:2286","MEDGEN:347305","UMLS:C1856790","icd11.foundation:353892894","MESH:C537918","MedDRA:10068448"],"synonyms":[{"name":"FFU complex","type":"exact"},{"name":"Ffu syndrome","type":"related"},{"name":"PFFD","type":"exact"},{"name":"femur fibula ulna syndrome","type":"related"},{"name":"femur-fibula-ulna dysostosis","type":"exact"},{"name":"femur-fibula-ulna syndrome","type":"exact"}],"termid":"MONDO:0009221","xrefs":{"Monarch":{"xref_id":"0009221"}}}


id: PBO:0089209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, middle-meiotic Cuf2","termid":"PBO:0089209"}


id: PBO:0038350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_allergic_trigger_for","termid":"PBO:0038350"}


id: GO:0043380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of memory T cell differentiation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"memory T cell differentiation","termid":"GO:0043379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of memory T cell differentiation","synonyms":[{"name":"regulation of memory T cell development","type":"related"},{"name":"regulation of memory T lymphocyte differentiation","type":"exact"},{"name":"regulation of memory T-cell differentiation","type":"exact"},{"name":"regulation of memory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043380"}


id: GO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["GOC:cilia","PMID:8441407","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm flagellum","synonyms":[{"name":"sperm cilium","type":"exact"},{"name":"sperm tail","type":"exact"}],"termid":"GO:0036126"}


id: GO:0071554
data:
  {"annotated_genes":["SJAG_03587","SJAG_02718","SJAG_04595","SJAG_01264","SJAG_04184","SJAG_02446","SJAG_01276","SJAG_03295","SJAG_01290","SJAG_04236","SJAG_02590","SJAG_02468","SJAG_02258","SJAG_03057","SJAG_04864","SJAG_03705","SJAG_00163","SJAG_03483","SJAG_04551","SJAG_01787","SJAG_01227","SJAG_01171","SJAG_04770","SJAG_03631","SJAG_01255","SJAG_01021","SJAG_03013","SJAG_02845","SJAG_00667","SJAG_00661","SJAG_03753","SJAG_00598","SJAG_00424","SJAG_04620","SJAG_00218","SJAG_02649","SJAG_01288","SJAG_05285","SJAG_02727","SJAG_04868","SJAG_02192","SJAG_02684","SJAG_01028","SJAG_02222","SJAG_01453","SJAG_04073","SJAG_01321","SJAG_03704","SJAG_04238","SJAG_04878","SJAG_02733","SJAG_01181","SJAG_01835","SJAG_04666","SJAG_00610","SJAG_03082","SJAG_01017","SJAG_04483","SJAG_01963","SJAG_02278","SJAG_03444","SJAG_04522","SJAG_02916","SJAG_00876","SJAG_01774","SJAG_04462","SJAG_04906","SJAG_00974","SJAG_02519","SJAG_05272","SJAG_04659","SJAG_03646","SJAG_04327","SJAG_00816","SJAG_03123","SJAG_04851","SJAG_03655","SJAG_04771","SJAG_05001","SJAG_04850","SJAG_00310","SJAG_01426","SJAG_01888","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94825],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88562,89057,92129,90603],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[73452],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[114470,118173,104533,118181,109452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[80793,74940,78395,77988,75169,79715,87854,72461,77442],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000032"},{"annotations":[94381,100512],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044347"},{"annotations":[71852,79021,73779,71030,73961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[106480,74881,91954,73454,116209,71306,113552,76234],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[78618,103004],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[108446,95468,102305,102306],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[102815,93696,95615,75270,79769,71154,70644,71788,118298,70974,100986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009272"},{"annotations":[94383,102308,111704,100513,108447,88629,89451,102307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[79878,76233,74880,76804,78264,89690,71305,110433,71659,78185,75650,80711,71357,102816,77180,75566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[117850,90088,92624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071852"},{"annotations":[107068,72853],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071966"},{"annotations":[111368,102508],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903340"},{"annotations":[92781,87869],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[91127,103210,105717,92765,106291,118300,118430],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[110489,107989,108829,74567],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903338"},{"annotations":[89795,92787,95305,103212],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[102511,100545,93072],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"},{"annotations":[71954,87944,111369],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070882"],"synonyms":[{"name":"cell wall organisation or biogenesis","type":"exact"},{"name":"cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"cellular cell wall organisation or biogenesis","type":"exact"},{"name":"cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:0071554","terms_by_termid":{"GO:0000032":null,"GO:0009272":null,"GO:0030476":null,"GO:0031505":null,"GO:0032995":null,"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0060237":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071852":null,"GO:0071966":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null,"GO:1903338":null,"GO:1903340":null,"GO:1904541":null}}


id: FYPO:0007165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cell cortex during meiotic cell cycle","synonyms":[{"name":"protein absent from cell cortex during meiotic cell cycle","type":"related"},{"name":"protein localization to cell cortex abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007165"}


id: PR:O13844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19G12.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C19G12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.05","synonyms":[{"name":"Spom972h-SPAC19G12.05","type":"exact"}],"termid":"PR:O13844"}


id: GO:0043737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.","definition_xrefs":["EC:3.1.21.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"deoxyribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.21.7-RXN"],"synonyms":[{"name":"DNase V activity","type":"related"},{"name":"Escherichia coli endodeoxyribonuclease V activity","type":"narrow"},{"name":"endodeoxyribonuclease V","type":"exact"},{"name":"endonuclease V activity","type":"broad"}],"termid":"GO:0043737"}


id: PBO:0063654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 11","termid":"PBO:0063654"}


id: GO:2000908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucomannan catabolic process","termid":"GO:2000898"},{"relation_name":"is_a","term_name":"positive regulation of mannan catabolic process","termid":"GO:2000996"},{"relation_name":"positively_regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucomannan catabolic process","synonyms":[{"name":"positive regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000908"}


id: GO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"positively_regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-matrix adhesion","synonyms":[{"name":"activation of cell-matrix adhesion","type":"narrow"},{"name":"stimulation of cell-matrix adhesion","type":"narrow"},{"name":"up regulation of cell-matrix adhesion","type":"exact"},{"name":"up-regulation of cell-matrix adhesion","type":"exact"},{"name":"upregulation of cell-matrix adhesion","type":"exact"}],"termid":"GO:0001954"}


id: PR:O14460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04354","PRO:DNx","PANTHER:PTHR23115:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.01c","secondary_identifiers":["UniProtKB:O14460"],"synonyms":[{"name":"EF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF2","type":"exact"}],"termid":"PR:O14460"}


id: MONDO:0009126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duodenal atresia is an embryopathy of the cranial intestine that leads to a complete absence of the duodenal lumen.","definition_xrefs":["Orphanet:1203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal atresia","termid":"MONDO:0001045"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal atresia","secondary_identifiers":["NCIT:C101025","MEDGEN:75602","OMIM:223400","SCTID:51118003","UMLS:C0266174","DOID:0080216","GARD:54","MedDRA:10013812","ICD9:751.1","MESH:C535720","HP:0002247"],"synonyms":[{"name":"Duodenal Atresia or Stenosis","type":"exact"},{"name":"atresia of duodenum","type":"exact"},{"name":"congenital atresia of duodenum","type":"exact"},{"name":"congenital duodenal atresia","type":"exact"},{"name":"duodenal atresia","type":"exact"},{"name":"duodenal atresia (disease)","type":"exact"},{"name":"duodenal stenosis","type":"related"}],"termid":"MONDO:0009126","xrefs":{"Monarch":{"xref_id":"0009126"}}}


id: PBO:0077578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 3","termid":"PBO:0077578"}


id: GO:0045850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nurse cell apoptotic process","termid":"GO:0045477"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nurse cell apoptotic process","synonyms":[{"name":"activation of nurse cell apoptosis","type":"narrow"},{"name":"positive regulation of nurse cell apoptosis","type":"narrow"},{"name":"stimulation of nurse cell apoptosis","type":"narrow"},{"name":"up regulation of nurse cell apoptosis","type":"exact"},{"name":"up-regulation of nurse cell apoptosis","type":"exact"},{"name":"upregulation of nurse cell apoptosis","type":"exact"}],"termid":"GO:0045850"}


id: PR:Q9UT74
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoaconitase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.16","synonyms":[{"name":"Spom972h-lys2","type":"exact"},{"name":"homoaconitate hydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT74"}


id: PBO:0110510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase Ssd2","termid":"PBO:0110510"}


id: PATO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000564 thickness value (obsolete PATO:0000564)","termid":"PATO:0000564"}


id: SO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether a nucleotide polymer is linear or circular.","direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topology_attribute","synonyms":[{"name":"topology attribute","type":"exact"}],"termid":"SO:0000986"}


id: PBO:0080641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 88","termid":"PBO:0080641"}


id: PBO:0031080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoskeleton_organization_phenotype","termid":"PBO:0031080"}


id: GO:0034225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of zinc ions.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation (obsolete GO:0034225)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc deficiency","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc ion limitation","type":"exact"}],"termid":"GO:0034225"}


id: MONDO:0044001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss characterized by a combination of conductive and sensorineural hearing loss. It is caused by problems in both the inner ear and middle or outer ear.","definition_xrefs":["NCIT:C26974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, mixed conductive-sensorineural","secondary_identifiers":["MEDGEN:102336","MESH:D046089","UMLS:C0155552","SCTID:77507001"],"synonyms":[{"name":"Losses, mixed hearing","type":"related"},{"name":"hearing loss, mixed","type":"related"},{"name":"hearing loss, mixed conductive sensorineural","type":"related"},{"name":"loss, mixed hearing","type":"related"},{"name":"mixed conductive and sensorineural deafness","type":"exact"},{"name":"mixed conductive and sensorineural hearing loss","type":"exact"},{"name":"mixed deafness","type":"related"},{"name":"mixed hearing loss","type":"exact"},{"name":"mixed type deafness","type":"related"}],"termid":"MONDO:0044001","xrefs":{"Monarch":{"xref_id":"0044001"}}}


id: GO:0044603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenylyl-protein+ H2O = adenylate + protein; mediates the removal of an adenylyl (adenosine 5'-monophosphate; AMP group) from specific residues of target proteins.","definition_xrefs":["PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140096","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"protein adenylylhydrolase activity","synonyms":[{"name":"protein deAMPylase activity","type":"exact"},{"name":"protein deAMPylation activity","type":"exact"}],"termid":"GO:0044603"}


id: MONDO:0100601
data:
  {"annotated_genes":["SJAG_03681","SJAG_04980","SJAG_02629","SJAG_02286","SJAG_04755","SJAG_02165","SJAG_05313","SJAG_01926","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[86284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013578"},{"annotations":[85639,85638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014602"},{"annotations":[87220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015022"},{"annotations":[86813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[86593,86594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011053"},{"annotations":[85904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011213"}]},"cv_name":"mondo","definition":"Autosomal dominant form of syndromic intellectual disability.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_02165":null,"SJAG_02286":null,"SJAG_02629":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04755":null,"SJAG_04980":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100601","terms_by_termid":{"MONDO:0011053":null,"MONDO:0011213":null,"MONDO:0013578":null,"MONDO:0013805":null,"MONDO:0014558":null,"MONDO:0014602":null,"MONDO:0015022":null},"xrefs":{"Monarch":{"xref_id":"0100601"}}}


id: GO:0015811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine (also known as dicysteine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-cystine transport","termid":"GO:0015811"}


id: RO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branching_part_of","termid":"RO:0002380"}


id: MONDO:0700118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome abnormality that occurs when there is a missing (deleted) copy of genetic material from the part of the long (q) arm near the center of chromosome 18.","definition_xrefs":["GARD:0010866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 18q deletion syndrome","termid":"MONDO:0011147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal chromosome 18q deletion syndrome","secondary_identifiers":["MEDGEN:1634938","GARD:10866","UMLS:C4707101"],"synonyms":[{"name":"proximal 18q deletion","type":"exact"},{"name":"proximal 18q deletion syndrome","type":"exact"},{"name":"proximal 18q-","type":"exact"}],"termid":"MONDO:0700118","xrefs":{"Monarch":{"xref_id":"0700118"}}}


id: MONDO:0015466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cranio-osteoarthropathy (COA) is a form of primary hypertrophic osteoarthropathy characterized by delayed closure of the cranial sutures and fontanels, digital clubbing, arthropathy, and periostosis.","definition_xrefs":["Orphanet:1525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypertrophic osteoarthropathy","termid":"MONDO:0016620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranio-osteoarthropathy","secondary_identifiers":["UMLS:C2678439","MEDGEN:394824","SCTID:720753002","GARD:1564","icd11.foundation:225223076"],"synonyms":[{"name":"Currarino disease","type":"exact"},{"name":"Currarino idiopathic osteoarthropathy","type":"exact"},{"name":"Reginato-Schiapachasse syndrome","type":"exact"},{"name":"cranio osteoarthropathy","type":"related"}],"termid":"MONDO:0015466","xrefs":{"Monarch":{"xref_id":"0015466"}}}


id: GO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehyde, a form of vitamin B6.","definition_xrefs":["CHEBI:17310","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxal binding","termid":"GO:0070280"}


id: PBO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 37","termid":"PBO:0050335"}


id: PBO:0075492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 2, pseudogene","termid":"PBO:0075492"}


id: FYECO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine absent","termid":"FYECO:0000381"}


id: MONDO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalitis (obsolete MONDO:0004825)","termid":"MONDO:0004825","xrefs":{"Monarch":{"xref_id":"0004825"}}}


id: PBO:0076918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFAP2E antisense RNA 1","termid":"PBO:0076918"}


id: PBO:0003882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20 (predicted)","termid":"PBO:0003882"}


id: PBO:0063287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 1","termid":"PBO:0063287"}


id: GO:0043227
data:
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