# genes

id: SJAG_01814
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72130],"is_not":false,"summary":null,"term":"GO:0006189"},{"annotations":[117748],"is_not":false,"summary":null,"term":"GO:0046084"}],"cellular_component":[{"annotations":[72129],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[117746],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[72128],"is_not":false,"summary":null,"term":"GO:0004644"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYZ1","EnsemblGenomes-Tr:EEB06759","GOA:B6JYZ1","InterPro:IPR002376","InterPro:IPR001555","EnsemblGenomes-Gn:SJAG_01814","InterPro:IPR004607","InterPro:IPR036477"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"}],"genes_by_uniquename":{"HGNC:4163":null,"SJAG_01814":null,"SPCC569.08c":null,"YDR408C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Formyl transferase","id":"PF00551","interpro_description":"Formyl transferase, N-terminal","interpro_id":"IPR002376","interpro_name":"Formyl_transf_N","locations":[{"end":199,"start":5}],"match_end":199,"match_start":5,"name":"Formyl_trans_N"},{"dbname":"CDD","description":"FMT_core_GART","id":"cd08645","interpro_description":"Phosphoribosylglycinamide formyltransferase","interpro_id":"IPR004607","interpro_name":"GART","locations":[{"end":202,"start":5}],"match_end":202,"match_start":5,"name":"FMT_core_GART"},{"dbname":"PROSITE_PATTERNS","description":"Phosphoribosylglycinamide formyltransferase active site.","id":"PS00373","interpro_description":"Phosphoribosylglycinamide formyltransferase, active site","interpro_id":"IPR001555","interpro_name":"GART_AS","locations":[{"end":174,"start":151}],"match_end":174,"match_start":151,"name":"GART"},{"dbname":"SUPERFAMILY","id":"SSF53328","interpro_description":"Formyl transferase, N-terminal domain superfamily","interpro_id":"IPR036477","interpro_name":"Formyl_transf_N_sf","locations":[{"end":207,"start":6}],"match_end":207,"match_start":6,"name":"Formyltransferase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.170","locations":[{"end":209,"start":2}],"match_end":209,"match_start":2},{"dbname":"PANTHER","id":"PTHR43369","locations":[{"end":206,"start":4}],"match_end":206,"match_start":4,"name":"PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE"},{"dbname":"HAMAP","description":"Phosphoribosylglycinamide formyltransferase [purN].","id":"MF_01930","interpro_description":"Phosphoribosylglycinamide formyltransferase","interpro_id":"IPR004607","interpro_name":"GART","locations":[{"end":205,"start":4}],"match_end":205,"match_start":4,"name":"PurN"},{"dbname":"NCBIFAM","description":"phosphoribosylglycinamide formyltransferase","id":"TIGR00639","interpro_description":"Phosphoribosylglycinamide formyltransferase","interpro_id":"IPR004607","interpro_name":"GART","locations":[{"end":205,"start":4}],"match_end":205,"match_start":4,"name":"PurN"}],"location":{"chromosome_name":"supercont5.3","end_pos":2413019,"start_pos":2412387,"strand":"forward"},"name":"ade5","ortholog_annotations":[{"gene_uniquename":"SJAG_01814","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4163","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01814","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC569.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01814","ortholog_taxonid":4932,"ortholog_uniquename":"YDR408C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01814","ortholog_taxonid":4932,"ortholog_uniquename":"YDR408C","reference_uniquename":"PMID:26896847"}],"product":"phosphoribosylglycinamide formyltransferase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004644"]}},"subset_termids":["GO:0005634","GO:0055086","GO:0016741"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004644":null,"GO:0005634":null,"GO:0005737":null,"GO:0006189":null,"GO:0046084":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01814.1"],"transcripts_by_uniquename":{"SJAG_01814.1":null},"uniprot_identifier":"B6JYZ1","uniquename":"SJAG_01814"}


id: SJAG_01815
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6JYZ2","EnsemblGenomes-Gn:SJAG_01815","EnsemblGenomes-Tr:EEB06760"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":51,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"}],"genes_by_uniquename":{"SJAG_01815":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":51,"start":1}],"match_end":51,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":10,"start":1}],"match_end":10,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":51,"start":39}],"match_end":51,"match_start":39,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2413821,"start_pos":2413573,"strand":"forward"},"product":"candidate S. pombe SPCC569.09  ortholog, syntenic position","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01815.1"],"transcripts_by_uniquename":{"SJAG_01815.1":null},"uniprot_identifier":"B6JYZ2","uniquename":"SJAG_01815"}


id: SJAG_01816
data:
  {"coiled_coil_coords":[{"range":{"end":705,"start":685}}],"cv_annotations":{"biological_process":[{"annotations":[119127],"is_not":false,"summary":null,"term":"GO:0141164"},{"annotations":[72769],"is_not":false,"summary":null,"term":"GO:0007005"}],"cellular_component":[{"annotations":[119125],"is_not":false,"summary":null,"term":"GO:0031942"}],"molecular_function":[{"annotations":[60102],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[60104],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[72770],"is_not":false,"summary":null,"term":"GO:0004176"},{"annotations":[60106],"is_not":false,"summary":null,"term":"GO:0004222"}],"mondo":[{"annotations":[87195],"is_not":false,"summary":null,"term":"MONDO:0015011"}]},"dbxrefs":["InterPro:IPR005936","InterPro:IPR003593","GOA:B6JYZ3","InterPro:IPR037219","InterPro:IPR041569","InterPro:IPR003959","InterPro:IPR027417","EnsemblGenomes-Gn:SJAG_01816","InterPro:IPR000642","UniProtKB/TrEMBL:B6JYZ3","EnsemblGenomes-Tr:EEB06761"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":196,"start":169}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"}],"genes_by_uniquename":{"HGNC:12843":null,"SJAG_01816":null,"SPCC965.04c":null,"YPR024W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Yme1-like, N-terminal","id":"PF21232","interpro_description":"Yme1-like, N-terminal domain","interpro_id":"IPR048438","interpro_name":"Yme1-like_N","locations":[{"end":118,"start":61}],"match_end":118,"match_start":61,"name":"Yme1-like_N"},{"dbname":"PFAM","description":"AAA+ lid domain","id":"PF17862","interpro_description":"AAA ATPase, AAA+ lid domain","interpro_id":"IPR041569","interpro_name":"AAA_lid_3","locations":[{"end":526,"start":483}],"match_end":526,"match_start":483,"name":"AAA_lid_3"},{"dbname":"PFAM","description":"ATPase family associated with various cellular activities (AAA)","id":"PF00004","interpro_description":"ATPase, AAA-type, core","interpro_id":"IPR003959","interpro_name":"ATPase_AAA_core","locations":[{"end":461,"start":327}],"match_end":461,"match_start":327,"name":"AAA"},{"dbname":"PFAM","description":"Peptidase family M41","id":"PF01434","interpro_description":"Peptidase M41","interpro_id":"IPR000642","interpro_name":"Peptidase_M41","locations":[{"end":720,"start":542}],"match_end":720,"match_start":542,"name":"Peptidase_M41"},{"dbname":"CDD","description":"RecA-like_FtsH","id":"cd19501","locations":[{"end":459,"start":288}],"match_end":459,"match_start":288,"name":"RecA-like_FtsH"},{"dbname":"SMART","id":"SM00382","interpro_description":"AAA+ ATPase domain","interpro_id":"IPR003593","interpro_name":"AAA+_ATPase","locations":[{"end":463,"start":323}],"match_end":463,"match_start":323,"name":"AAA_5"},{"dbname":"FUNFAM","description":"ATP-dependent zinc metalloprotease FtsH","id":"G3DSA:1.20.58.760:FF:000002","locations":[{"end":728,"start":536}],"match_end":728,"match_start":536},{"dbname":"FUNFAM","description":"ATP-dependent zinc metalloprotease FtsH","id":"G3DSA:1.10.8.60:FF:000001","locations":[{"end":536,"start":462}],"match_end":536,"match_start":462},{"dbname":"FUNFAM","description":"ATP-dependent zinc metalloprotease FTSH 4","id":"G3DSA:3.40.50.300:FF:000175","locations":[{"end":461,"start":274}],"match_end":461,"match_start":274},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":530,"start":283}],"match_end":530,"match_start":283,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF140990","interpro_description":"Peptidase M41-like","interpro_id":"IPR037219","interpro_name":"Peptidase_M41-like","locations":[{"end":724,"start":543}],"match_end":724,"match_start":543,"name":"FtsH protease domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.8.60","locations":[{"end":535,"start":462}],"match_end":535,"match_start":462},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":461,"start":274}],"match_end":461,"match_start":274},{"dbname":"GENE3D","id":"G3DSA:1.20.58.760","interpro_description":"Peptidase M41-like","interpro_id":"IPR037219","interpro_name":"Peptidase_M41-like","locations":[{"end":728,"start":536}],"match_end":728,"match_start":536,"name":"Peptidase M41"},{"dbname":"PANTHER","id":"PTHR23076","locations":[{"end":723,"start":211}],"match_end":723,"match_start":211,"name":"METALLOPROTEASE M41 FTSH"},{"dbname":"COILS","id":"Coil","locations":[{"end":705,"start":685}],"match_end":705,"match_start":685,"name":"Coil"},{"dbname":"HAMAP","description":"ATP-dependent zinc metalloprotease FtsH [ftsH].","id":"MF_01458","interpro_description":"ATP-dependent zinc metalloprotease, FtsH","interpro_id":"IPR005936","interpro_name":"FtsH","locations":[{"end":728,"start":4}],"match_end":728,"match_start":4,"name":"FtsH"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":196,"start":169}],"match_end":196,"match_start":169,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2416564,"start_pos":2414290,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":123,"start":110}},{"range":{"end":170,"start":154}},{"range":{"end":249,"start":237}},{"range":{"end":307,"start":295}},{"range":{"end":701,"start":689}}],"name":"yme1","ortholog_annotations":[{"gene_uniquename":"SJAG_01816","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12843","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01816","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC965.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01816","ortholog_taxonid":4932,"ortholog_uniquename":"YPR024W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01816","ortholog_taxonid":4932,"ortholog_uniquename":"YPR024W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial inner membrane i-AAA protease complex subunit Yme1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0016887","GO:0004222","GO:0004176"]}},"subset_termids":["GO:0030163","GO:0005739","GO:0008233","GO:0140096","GO:0007005","MONDO:0005559","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004176":null,"GO:0004222":null,"GO:0005524":null,"GO:0007005":null,"GO:0016887":null,"GO:0031942":null,"GO:0141164":null,"MONDO:0015011":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":263,"start":241}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01816.1"],"transcripts_by_uniquename":{"SJAG_01816.1":null},"uniprot_identifier":"B6JYZ3","uniquename":"SJAG_01816"}


id: SJAG_01817
data:
  {"coiled_coil_coords":[{"range":{"end":57,"start":37}},{"range":{"end":199,"start":179}},{"range":{"end":227,"start":204}},{"range":{"end":270,"start":250}}],"cv_annotations":{"biological_process":[{"annotations":[60786],"is_not":false,"summary":null,"term":"GO:1902600"},{"annotations":[73356],"is_not":false,"summary":null,"term":"GO:0007035"}],"cellular_component":[{"annotations":[119117],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[119118],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73355],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[119120],"is_not":false,"summary":null,"term":"GO:0000221"}],"molecular_function":[{"annotations":[119123],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[60785],"is_not":false,"summary":null,"term":"GO:0046961"}]},"dbxrefs":["GOA:B6JYZ4","UniProtKB/TrEMBL:B6JYZ4","InterPro:IPR002699","EnsemblGenomes-Gn:SJAG_01817","EnsemblGenomes-Tr:EEB06762"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":658,"start":215}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"}],"genes_by_uniquename":{"HGNC:13527":null,"SJAG_01817":null,"SPCC965.03":null,"YEL051W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP synthase subunit D","id":"PF01813","interpro_description":"ATPase, V1 complex, subunit D","interpro_id":"IPR002699","interpro_name":"V_ATPase_D","locations":[{"end":209,"start":16}],"match_end":209,"match_start":16,"name":"ATP-synt_D"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.3240","locations":[{"end":198,"start":1}],"match_end":198,"match_start":1},{"dbname":"PANTHER","id":"PTHR11671","interpro_description":"ATPase, V1 complex, subunit D","interpro_id":"IPR002699","interpro_name":"V_ATPase_D","locations":[{"end":681,"start":1}],"match_end":681,"match_start":1,"name":"V-TYPE ATP SYNTHASE SUBUNIT D"},{"dbname":"COILS","id":"Coil","locations":[{"end":57,"start":37},{"end":199,"start":179},{"end":227,"start":204},{"end":270,"start":250}],"match_end":270,"match_start":37,"name":"Coil"},{"dbname":"HAMAP","description":"V-type ATP synthase subunit D [atpD].","id":"MF_00271","interpro_description":"ATPase, V1 complex, subunit D","interpro_id":"IPR002699","interpro_name":"V_ATPase_D","locations":[{"end":214,"start":6}],"match_end":214,"match_start":6,"name":"ATP_synth_D_arch"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":658,"start":215}],"match_end":658,"match_start":215,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":347,"start":335},{"end":509,"start":493},{"end":533,"start":517}],"match_end":533,"match_start":335,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":283,"start":229},{"end":334,"start":294},{"end":417,"start":348},{"end":474,"start":445},{"end":546,"start":534}],"match_end":546,"match_start":229,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":615,"start":603},{"end":655,"start":638}],"match_end":655,"match_start":603,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":635,"start":618}],"match_end":635,"match_start":618,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"V-type ATP synthase subunit D","id":"TIGR00309","interpro_description":"ATPase, V1 complex, subunit D","interpro_id":"IPR002699","interpro_name":"V_ATPase_D","locations":[{"end":213,"start":7}],"match_end":213,"match_start":7,"name":"V_ATPase_subD"}],"location":{"chromosome_name":"supercont5.3","end_pos":2419189,"start_pos":2417022,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":239,"start":220}},{"range":{"end":280,"start":243}},{"range":{"end":339,"start":290}},{"range":{"end":436,"start":341}},{"range":{"end":552,"start":439}},{"range":{"end":635,"start":618}}],"name":"vma8","ortholog_annotations":[{"gene_uniquename":"SJAG_01817","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13527","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01817","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC965.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01817","ortholog_taxonid":4932,"ortholog_uniquename":"YEL051W","reference_uniquename":"PMID:29761456"}],"product":"V-type ATPase V1 subunit D","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0046961","GO:0016887"]}},"subset_termids":["GO:0005829","GO:0055085","GO:0022857","GO:0005773","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000221":null,"GO:0000329":null,"GO:0005829":null,"GO:0007035":null,"GO:0016887":null,"GO:0032153":null,"GO:0046961":null,"GO:1902600":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01817.1"],"transcripts_by_uniquename":{"SJAG_01817.1":null},"uniprot_identifier":"B6JYZ4","uniquename":"SJAG_01817"}


id: SJAG_01818
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116272],"is_not":false,"summary":null,"term":"GO:0000467"},{"annotations":[116273],"is_not":false,"summary":null,"term":"GO:0070651"},{"annotations":[116274],"is_not":false,"summary":null,"term":"GO:0071028"},{"annotations":[116275],"is_not":false,"summary":null,"term":"GO:0071042"},{"annotations":[116276],"is_not":false,"summary":null,"term":"GO:0071035"},{"annotations":[116277],"is_not":false,"summary":null,"term":"GO:0070478"},{"annotations":[116278],"is_not":false,"summary":null,"term":"GO:0070481"},{"annotations":[116279],"is_not":false,"summary":null,"term":"GO:0071038"}],"cellular_component":[{"annotations":[116265],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[116266],"is_not":false,"summary":null,"term":"GO:0000177"},{"annotations":[116267],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73868],"is_not":false,"summary":null,"term":"GO:0000176"},{"annotations":[116270],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[61413],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[86870],"is_not":false,"summary":null,"term":"MONDO:0030261"}]},"dbxrefs":["InterPro:IPR039771","InterPro:IPR012340","InterPro:IPR019495","UniProtKB/TrEMBL:B6JYZ5","InterPro:IPR022967","EnsemblGenomes-Gn:SJAG_01818","EnsemblGenomes-Tr:EEB06763","GOA:B6JYZ5","InterPro:IPR003029"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"}],"genes_by_uniquename":{"HGNC:17286":null,"SJAG_01818":null,"SPCC1840.11":null,"YNL232W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Exosome component EXOSC1/CSL4","id":"PF10447","interpro_description":"Exosome complex component CSL4, C-terminal","interpro_id":"IPR019495","interpro_name":"EXOSC1_C","locations":[{"end":84,"start":56},{"end":127,"start":88}],"match_end":127,"match_start":56,"name":"EXOSC1"},{"dbname":"CDD","description":"S1_CSL4","id":"cd05791","locations":[{"end":145,"start":54}],"match_end":145,"match_start":54,"name":"S1_CSL4"},{"dbname":"PROSITE_PROFILES","description":"S1 domain profile.","id":"PS50126","interpro_description":"S1 domain","interpro_id":"IPR003029","interpro_name":"S1_domain","locations":[{"end":139,"start":60}],"match_end":139,"match_start":60,"name":"S1"},{"dbname":"SMART","id":"SM00316","interpro_description":"S1 domain","interpro_id":"IPR003029","interpro_name":"S1_domain","locations":[{"end":138,"start":58}],"match_end":138,"match_start":58,"name":"S1_6"},{"dbname":"FUNFAM","description":"Exosome complex component CSL4","id":"G3DSA:2.40.50.140:FF:000198","locations":[{"end":181,"start":50}],"match_end":181,"match_start":50},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":176,"start":56}],"match_end":176,"match_start":56,"name":"Nucleic acid-binding proteins"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":181,"start":49}],"match_end":181,"match_start":49},{"dbname":"PANTHER","id":"PTHR12686","interpro_description":"Exosome complex component Csl4","interpro_id":"IPR039771","interpro_name":"Csl4","locations":[{"end":179,"start":4}],"match_end":179,"match_start":4,"name":"3'-5' EXORIBONUCLEASE CSL4-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2420345,"start_pos":2419620,"strand":"reverse"},"name":"csl4","ortholog_annotations":[{"gene_uniquename":"SJAG_01818","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17286","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01818","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01818","ortholog_taxonid":4932,"ortholog_uniquename":"YNL232W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01818","ortholog_taxonid":4932,"ortholog_uniquename":"YNL232W","reference_uniquename":"PMID:26896847"}],"product":"exosome subunit Csl4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005634","MONDO:0020022","GO:0005694","GO:0006399","GO:0005829","GO:0005730","GO:0016071","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0000467":null,"GO:0000785":null,"GO:0003723":null,"GO:0005730":null,"GO:0005829":null,"GO:0070478":null,"GO:0070481":null,"GO:0070651":null,"GO:0071028":null,"GO:0071035":null,"GO:0071038":null,"GO:0071042":null,"MONDO:0030261":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01818.1"],"transcripts_by_uniquename":{"SJAG_01818.1":null},"uniprot_identifier":"B6JYZ5","uniquename":"SJAG_01818"}


id: SJAG_01819
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77943],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[116261],"is_not":false,"summary":null,"term":"GO:1905323"}],"cellular_component":[{"annotations":[116252],"is_not":false,"summary":null,"term":"GO:0120115"},{"annotations":[77946],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[116255],"is_not":false,"summary":null,"term":"GO:0005697"},{"annotations":[116256],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[77945],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[116258],"is_not":false,"summary":null,"term":"GO:0005682"},{"annotations":[77944],"is_not":false,"summary":null,"term":"GO:0005688"}],"molecular_function":[{"annotations":[77942],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[116263],"is_not":false,"summary":null,"term":"GO:0140691"},{"annotations":[116264],"is_not":false,"summary":null,"term":"GO:0030620"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01819","EnsemblGenomes-Tr:EEB06764","InterPro:IPR001163","InterPro:IPR034103","InterPro:IPR010920","GOA:B6JYZ6","UniProtKB/TrEMBL:B6JYZ6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"}],"genes_by_uniquename":{"HGNC:20471":null,"SJAG_01819":null,"SPCC1840.10":null,"YJR022W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LSM domain","id":"PF01423","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":69,"start":3}],"match_end":69,"match_start":3,"name":"LSM"},{"dbname":"CDD","description":"LSm8","id":"cd01727","interpro_description":"Sm-like protein Lsm8","interpro_id":"IPR034103","interpro_name":"Lsm8","locations":[{"end":89,"start":2}],"match_end":89,"match_start":2,"name":"LSm8"},{"dbname":"PROSITE_PROFILES","description":"Sm domain profile.","id":"PS52002","interpro_description":"Sm domain","interpro_id":"IPR047575","interpro_name":"Sm","locations":[{"end":74,"start":1}],"match_end":74,"match_start":1,"name":"SM"},{"dbname":"SMART","id":"SM00651","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":70,"start":1}],"match_end":70,"match_start":1,"name":"Sm3"},{"dbname":"FUNFAM","description":"U6 snRNA-associated Sm-like protein LSm8","id":"G3DSA:2.30.30.100:FF:000027","locations":[{"end":93,"start":1}],"match_end":93,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50182","interpro_description":"LSM domain superfamily","interpro_id":"IPR010920","interpro_name":"LSM_dom_sf","locations":[{"end":77,"start":3}],"match_end":77,"match_start":3,"name":"Sm-like ribonucleoproteins"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.100","locations":[{"end":92,"start":1}],"match_end":92,"match_start":1},{"dbname":"PANTHER","id":"PTHR15588","interpro_description":"U6 snRNA-associated Sm-like protein Lsm1/8","interpro_id":"IPR044642","interpro_name":"PTHR15588","locations":[{"end":92,"start":2}],"match_end":92,"match_start":2,"name":"LSM1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2421120,"start_pos":2420724,"strand":"reverse"},"name":"lsm8","ortholog_annotations":[{"gene_uniquename":"SJAG_01819","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20471","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01819","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01819","ortholog_taxonid":4932,"ortholog_uniquename":"YJR022W","reference_uniquename":"PMID:29761456"}],"product":"Lsm2-8 complex subunit Lsm8","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729","GO:0030620"],"not-binding":["GO:0140691"]}},"subset_termids":["GO:0065003","GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005682":null,"GO:0005686":null,"GO:0005688":null,"GO:0005697":null,"GO:0030620":null,"GO:0045292":null,"GO:0046540":null,"GO:0071011":null,"GO:0120115":null,"GO:0140691":null,"GO:1905323":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01819.1"],"transcripts_by_uniquename":{"SJAG_01819.1":null},"uniprot_identifier":"B6JYZ6","uniquename":"SJAG_01819"}


id: SJAG_01820
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79523],"is_not":false,"summary":null,"term":"GO:0006744"}],"cellular_component":[{"annotations":[116249],"is_not":false,"summary":null,"term":"GO:0005759"}],"mondo":[{"annotations":[86612],"is_not":false,"summary":null,"term":"MONDO:0032630"}]},"dbxrefs":["InterPro:IPR001509","GOA:B6JYZ7","InterPro:IPR036291","UniProtKB/TrEMBL:B6JYZ7","EnsemblGenomes-Tr:EEB06765","EnsemblGenomes-Gn:SJAG_01820"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"}],"genes_by_uniquename":{"HGNC:7693":null,"SJAG_01820":null,"SPCC1840.09":null,"YLR290C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NAD dependent epimerase/dehydratase family","id":"PF01370","interpro_description":"NAD-dependent epimerase/dehydratase","interpro_id":"IPR001509","interpro_name":"Epimerase_deHydtase","locations":[{"end":67,"start":3}],"match_end":67,"match_start":3,"name":"Epimerase"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":76,"start":1},{"end":273,"start":132}],"match_end":273,"match_start":1,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":78,"start":1},{"end":272,"start":121}],"match_end":272,"match_start":1},{"dbname":"PANTHER","id":"PTHR12126","interpro_description":"Mitochondrial Complex I NDUFA9 Subunit","interpro_id":"IPR051207","interpro_name":"ComplexI_NDUFA9_subunit","locations":[{"end":99,"start":2}],"match_end":99,"match_start":2,"name":"NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2422223,"start_pos":2421402,"strand":"reverse"},"name":"coq11","ortholog_annotations":[{"gene_uniquename":"SJAG_01820","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7693","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01820","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01820","ortholog_taxonid":4932,"ortholog_uniquename":"YLR290C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01820","ortholog_taxonid":4932,"ortholog_uniquename":"YLR290C","reference_uniquename":"PMID:26896847"}],"product":"ubiquinone biosynthesis protein Coq11","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["MONDO:0004069","GO:0005739","MONDO:0005066","GO:0006744"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005759":null,"GO:0006744":null,"MONDO:0032630":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01820.1"],"transcripts_by_uniquename":{"SJAG_01820.1":null},"uniprot_identifier":"B6JYZ7","uniquename":"SJAG_01820"}


id: SJAG_01821
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76286],"is_not":false,"summary":null,"term":"GO:0000463"},{"annotations":[115711],"is_not":false,"summary":null,"term":"GO:0032956"},{"annotations":[115712],"is_not":false,"summary":null,"term":"GO:0070507"},{"annotations":[115714],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[76285],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[115709],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[76284],"is_not":false,"summary":null,"term":"GO:0004860"}]},"dbxrefs":["InterPro:IPR019775","InterPro:IPR024977","InterPro:IPR036322","EnsemblGenomes-Gn:SJAG_01821","InterPro:IPR015943","InterPro:IPR017986","GOA:B6JYZ8","InterPro:IPR001680","UniProtKB/TrEMBL:B6JYZ8","EnsemblGenomes-Tr:EEB06766"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":343,"start":295}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"}],"genes_by_uniquename":{"HGNC:20882":null,"SJAG_01821":null,"SPCC16C4.08c":null,"YKL021C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Anaphase-promoting complex subunit 4 WD40 domain","id":"PF12894","interpro_description":"Anaphase-promoting complex subunit 4-like, WD40 domain","interpro_id":"IPR024977","interpro_name":"Apc4-like_WD40_dom","locations":[{"end":245,"start":176}],"match_end":245,"match_start":176,"name":"ANAPC4_WD40"},{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":61,"start":26},{"end":148,"start":111}],"match_end":148,"match_start":26,"name":"WD40"},{"dbname":"PROSITE_PATTERNS","description":"Trp-Asp (WD) repeats signature.","id":"PS00678","interpro_description":"WD40 repeat, conserved site","interpro_id":"IPR019775","interpro_name":"WD40_repeat_CS","locations":[{"end":149,"start":135}],"match_end":149,"match_start":135,"name":"WD_REPEATS_1"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":157,"start":116},{"end":265,"start":251}],"match_end":265,"match_start":116,"name":"WD_REPEATS_2"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":61,"start":24},{"end":105,"start":64},{"end":148,"start":108},{"end":225,"start":189},{"end":265,"start":228}],"match_end":265,"match_start":24,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":286,"start":8}],"match_end":286,"match_start":8,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":307,"start":5}],"match_end":307,"match_start":5},{"dbname":"PANTHER","id":"PTHR44675","interpro_description":"PAK1 Kinase Regulator","interpro_id":"IPR051959","interpro_name":"PAK1-Kinase_Regulator","locations":[{"end":339,"start":2}],"match_end":339,"match_start":2,"name":"PAK1 INTERACTING PROTEIN 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":343,"start":295}],"match_end":343,"match_start":295,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":323,"start":307}],"match_end":323,"match_start":307,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":343,"start":332}],"match_end":343,"match_start":332,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2425092,"start_pos":2423917,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":120,"start":115}},{"range":{"end":341,"start":302}}],"name":"skb15","ortholog_annotations":[{"gene_uniquename":"SJAG_01821","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20882","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01821","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01821","ortholog_taxonid":4932,"ortholog_uniquename":"YKL021C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01821","ortholog_taxonid":4932,"ortholog_uniquename":"YKL021C","reference_uniquename":"PMID:26896847"}],"product":"p21 activated protein kinase inhibitor Skb15","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004860"]}},"subset_termids":["GO:0000226","GO:0023052","GO:0030036","GO:0042254","GO:0005634","GO:0030684","GO:0005730","GO:0030234","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000463":null,"GO:0004860":null,"GO:0005730":null,"GO:0023052":null,"GO:0030684":null,"GO:0032956":null,"GO:0070507":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01821.1"],"transcripts_by_uniquename":{"SJAG_01821.1":null},"uniprot_identifier":"B6JYZ8","uniquename":"SJAG_01821"}


id: SJAG_01822
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115720],"is_not":false,"summary":null,"term":"GO:0000956"}],"cellular_component":[{"annotations":[115716],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[115718],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80029],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[80028],"is_not":false,"summary":null,"term":"GO:0000175"},{"annotations":[69266],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[85559],"is_not":false,"summary":null,"term":"MONDO:0009965"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYZ9","InterPro:IPR001900","InterPro:IPR041505","InterPro:IPR012340","InterPro:IPR041093","EnsemblGenomes-Tr:EEB06767","EnsemblGenomes-Gn:SJAG_01822","GOA:B6JYZ9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":69,"start":1}},{"range":{"end":270,"start":182}},{"range":{"end":426,"start":399}},{"range":{"end":510,"start":490}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"}],"genes_by_uniquename":{"HGNC:28648":null,"SJAG_01822":null,"SPCC16C4.09":null,"YDR293C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DIS3-like exonuclease 2 C terminal","id":"PF17877","interpro_description":"DIS3-like exonuclease 2-like, C-terminal","interpro_id":"IPR041093","interpro_name":"Dis3l2-like_C","locations":[{"end":1068,"start":1023}],"match_end":1068,"match_start":1023,"name":"Dis3l2_C_term"},{"dbname":"PFAM","description":"Dis3-like cold-shock domain 2 (CSD2)","id":"PF17849","interpro_description":"Dis3-like cold-shock domain 2","interpro_id":"IPR041505","interpro_name":"Dis3_CSD2","locations":[{"end":587,"start":514}],"match_end":587,"match_start":514,"name":"OB_Dis3"},{"dbname":"PFAM","description":"RNB domain","id":"PF00773","interpro_description":"Ribonuclease II/R","interpro_id":"IPR001900","interpro_name":"RNase_II/R","locations":[{"end":972,"start":657}],"match_end":972,"match_start":657,"name":"RNB"},{"dbname":"SMART","id":"SM00955","interpro_description":"Ribonuclease II/R","interpro_id":"IPR001900","interpro_name":"RNase_II/R","locations":[{"end":973,"start":618}],"match_end":973,"match_start":618,"name":"RNB_2"},{"dbname":"FUNFAM","description":"Cell wall biogenesis protein","id":"G3DSA:2.40.50.700:FF:000002","locations":[{"end":576,"start":496}],"match_end":576,"match_start":496},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":472,"start":317},{"end":632,"start":544},{"end":867,"start":662},{"end":1008,"start":900}],"match_end":1008,"match_start":317,"name":"Nucleic acid-binding proteins"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.690","locations":[{"end":409,"start":309}],"match_end":409,"match_start":309},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":1092,"start":1021}],"match_end":1092,"match_start":1021},{"dbname":"GENE3D","id":"G3DSA:2.40.50.700","locations":[{"end":576,"start":497}],"match_end":576,"match_start":497},{"dbname":"PANTHER","id":"PTHR23355","interpro_description":"RNR Ribonuclease","interpro_id":"IPR050180","interpro_name":"RNR_Ribonuclease","locations":[{"end":1055,"start":181}],"match_end":1055,"match_start":181,"name":"RIBONUCLEASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":69,"start":1},{"end":270,"start":182},{"end":426,"start":399},{"end":510,"start":490}],"match_end":510,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":67,"start":58},{"end":200,"start":182}],"match_end":200,"match_start":58,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":57,"start":31},{"end":224,"start":207},{"end":243,"start":234},{"end":424,"start":412},{"end":508,"start":497}],"match_end":508,"match_start":31,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2428755,"start_pos":2425435,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":66,"start":57}},{"range":{"end":91,"start":78}},{"range":{"end":199,"start":166}},{"range":{"end":312,"start":303}},{"range":{"end":607,"start":597}},{"range":{"end":721,"start":706}},{"range":{"end":890,"start":876}}],"name":"sts5","ortholog_annotations":[{"gene_uniquename":"SJAG_01822","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28648","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01822","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01822","ortholog_taxonid":4932,"ortholog_uniquename":"YDR293C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01822","ortholog_taxonid":4932,"ortholog_uniquename":"YDR293C","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic P body 3'-5'-exoribonuclease, Dis3L2-related","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0000175"]}},"subset_termids":["GO:0016071","GO:0004527","GO:0005829","GO:0016788","GO:0000932","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000175":null,"GO:0000932":null,"GO:0000956":null,"GO:0003723":null,"GO:0005829":null,"GO:0032153":null,"MONDO:0009965":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01822.1"],"transcripts_by_uniquename":{"SJAG_01822.1":null},"uniprot_identifier":"B6JYZ9","uniquename":"SJAG_01822"}


id: SJAG_01823
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115797],"is_not":false,"summary":null,"term":"GO:0140529"},{"annotations":[115798],"is_not":false,"summary":null,"term":"GO:0006335"},{"annotations":[115799],"is_not":false,"summary":null,"term":"GO:1902983"},{"annotations":[115800],"is_not":false,"summary":null,"term":"GO:0031507"},{"annotations":[115801],"is_not":false,"summary":null,"term":"GO:1902975"}],"cellular_component":[{"annotations":[115795],"is_not":false,"summary":null,"term":"GO:0008622"},{"annotations":[115796],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[115802],"is_not":false,"summary":null,"term":"GO:0030337"},{"annotations":[115803],"is_not":false,"summary":null,"term":"GO:0031491"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ00","InterPro:IPR003958","InterPro:IPR009072","EnsemblGenomes-Tr:EEB06768","GOA:B6JZ00","EnsemblGenomes-Gn:SJAG_01823"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"csl4","uniquename":"SJAG_01818"},{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"}],"genes_by_uniquename":{"HGNC:18755":null,"SJAG_01823":null,"SPCC16C4.22":null,"YBR278W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Histone-like transcription factor (CBF/NF-Y) and archaeal histone","id":"PF00808","interpro_description":"Transcription factor CBF/NF-Y/archaeal histone domain","interpro_id":"IPR003958","interpro_name":"CBFA_NFYB_domain","locations":[{"end":73,"start":11}],"match_end":73,"match_start":11,"name":"CBFD_NFYB_HMF"},{"dbname":"CDD","description":"HFD_Dpb3-like","id":"cd23645","locations":[{"end":86,"start":9}],"match_end":86,"match_start":9,"name":"HFD_Dpb3-like"},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":87,"start":3}],"match_end":87,"match_start":3,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":88,"start":1}],"match_end":88,"match_start":1,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR10252","interpro_description":"Transcription/DNA replication regulator","interpro_id":"IPR050568","interpro_name":"Transcr_DNA_Rep_Reg","locations":[{"end":88,"start":9}],"match_end":88,"match_start":9,"name":"HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2430585,"start_pos":2430231,"strand":"forward"},"name":"dpb3","ortholog_annotations":[{"gene_uniquename":"SJAG_01823","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18755","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01823","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.22","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01823","ortholog_taxonid":4932,"ortholog_uniquename":"YBR278W","reference_uniquename":"PMID:29761456"}],"product":"DNA polymerase epsilon Dpb3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031491"],"not-binding":["GO:0030337"]}},"subset_termids":["GO:0005634","GO:0065003","GO:0005694","GO:0006260","GO:0006325","GO:0030234","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006335":null,"GO:0008622":null,"GO:0030337":null,"GO:0031491":null,"GO:0031507":null,"GO:0043596":null,"GO:0140529":null,"GO:1902975":null,"GO:1902983":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01823.1"],"transcripts_by_uniquename":{"SJAG_01823.1":null},"uniprot_identifier":"B6JZ00","uniquename":"SJAG_01823"}


id: SJAG_01824
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73441],"is_not":false,"summary":null,"term":"GO:0009051"}],"cellular_component":[{"annotations":[73439],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[115724],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[73440],"is_not":false,"summary":null,"term":"GO:0017057"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01824","GOA:B6JZ01","InterPro:IPR006148","InterPro:IPR005900","InterPro:IPR037171","InterPro:IPR039104","UniProtKB/TrEMBL:B6JZ01","EnsemblGenomes-Tr:EEB06769"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lsm8","uniquename":"SJAG_01819"},{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"}],"genes_by_uniquename":{"HGNC:8903":null,"SJAG_01824":null,"SPCC16C4.10":null,"YCR073W-A":null,"YGR248W":null,"YHR163W":null,"YNR034W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase","id":"PF01182","interpro_description":"Glucosamine/galactosamine-6-phosphate isomerase","interpro_id":"IPR006148","interpro_name":"Glc/Gal-6P_isomerase","locations":[{"end":236,"start":8}],"match_end":236,"match_start":8,"name":"Glucosamine_iso"},{"dbname":"CDD","description":"6PGL","id":"cd01400","interpro_description":"6-phosphogluconolactonase, DevB-type","interpro_id":"IPR005900","interpro_name":"6-phosphogluconolactonase_DevB","locations":[{"end":238,"start":12}],"match_end":238,"match_start":12,"name":"6PGL"},{"dbname":"FUNFAM","description":"6-phosphogluconolactonase","id":"G3DSA:3.40.50.1360:FF:000005","locations":[{"end":247,"start":2}],"match_end":247,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF100950","interpro_description":"NagB/RpiA transferase-like","interpro_id":"IPR037171","interpro_name":"NagB/RpiA_transferase-like","locations":[{"end":249,"start":4}],"match_end":249,"match_start":4,"name":"NagB/RpiA/CoA transferase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1360","locations":[{"end":247,"start":3}],"match_end":247,"match_start":3},{"dbname":"PANTHER","id":"PTHR11054","interpro_description":"6-Phosphogluconolactonase","interpro_id":"IPR039104","interpro_name":"PGLS","locations":[{"end":248,"start":6}],"match_end":248,"match_start":6,"name":"6-PHOSPHOGLUCONOLACTONASE"},{"dbname":"NCBIFAM","description":"6-phosphogluconolactonase","id":"TIGR01198","interpro_description":"6-phosphogluconolactonase, DevB-type","interpro_id":"IPR005900","interpro_name":"6-phosphogluconolactonase_DevB","locations":[{"end":245,"start":6}],"match_end":245,"match_start":6,"name":"pgl"}],"location":{"chromosome_name":"supercont5.3","end_pos":2431831,"start_pos":2430894,"strand":"forward"},"name":"pgl1","ortholog_annotations":[{"gene_uniquename":"SJAG_01824","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8903","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01824","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01824","ortholog_taxonid":4932,"ortholog_uniquename":"YCR073W-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01824","ortholog_taxonid":4932,"ortholog_uniquename":"YGR248W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01824","ortholog_taxonid":4932,"ortholog_uniquename":"YGR248W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01824","ortholog_taxonid":4932,"ortholog_uniquename":"YHR163W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01824","ortholog_taxonid":4932,"ortholog_uniquename":"YHR163W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01824","ortholog_taxonid":4932,"ortholog_uniquename":"YNR034W","reference_uniquename":"PMID:29761456"}],"product":"6-phosphogluconolactonase Pgk1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0017057"]}},"subset_termids":["GO:0006091","GO:0055086","GO:0005634","GO:0005829","GO:0016788"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0009051":null,"GO:0017057":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01824.1"],"transcripts_by_uniquename":{"SJAG_01824.1":null},"uniprot_identifier":"B6JZ01","uniquename":"SJAG_01824"}


id: SJAG_01825
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":32,"start":32}}],"cv_annotations":{"biological_process":[{"annotations":[115730],"is_not":false,"summary":null,"term":"GO:0045875"},{"annotations":[115731],"is_not":false,"summary":null,"term":"GO:0007165"},{"annotations":[115732],"is_not":false,"summary":null,"term":"GO:0007089"}],"cellular_component":[{"annotations":[115727],"is_not":false,"summary":null,"term":"GO:0042764"},{"annotations":[115728],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80457],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[69810],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[80456],"is_not":false,"summary":null,"term":"GO:0004693"}],"mondo":[{"annotations":[85627],"is_not":false,"summary":null,"term":"MONDO:0014596"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06770","InterPro:IPR011009","InterPro:IPR000719","InterPro:IPR008271","UniProtKB/TrEMBL:B6JZ02","InterPro:IPR017441","EnsemblGenomes-Gn:SJAG_01825","GOA:B6JZ02"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"coq11","uniquename":"SJAG_01820"},{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"}],"genes_by_uniquename":{"HGNC:1774":null,"SJAG_01825":null,"SPCC16C4.11":null,"YPL031C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":285,"start":3}],"match_end":285,"match_start":3,"name":"Pkinase"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":32,"start":9}],"match_end":32,"match_start":9,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":134,"start":122}],"match_end":134,"match_start":122,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":285,"start":3}],"match_end":285,"match_start":3,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":285,"start":3}],"match_end":285,"match_start":3,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Probable PHO85-cyclin-dependent protein kinase","id":"G3DSA:1.10.510.10:FF:000410","locations":[{"end":288,"start":83}],"match_end":288,"match_start":83},{"dbname":"FUNFAM","description":"Cyclin-dependent kinase 2","id":"G3DSA:3.30.200.20:FF:000599","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":287,"start":2}],"match_end":287,"match_start":2,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":288,"start":83}],"match_end":288,"match_start":83,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PANTHER","id":"PTHR24056","interpro_description":"Cyclin-dependent kinase","interpro_id":"IPR050108","interpro_name":"CDK","locations":[{"end":285,"start":2}],"match_end":285,"match_start":2,"name":"CELL DIVISION PROTEIN KINASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":2433292,"start_pos":2432272,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":268,"start":253}}],"name":"pef1","ortholog_annotations":[{"gene_uniquename":"SJAG_01825","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1774","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01825","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01825","ortholog_taxonid":4932,"ortholog_uniquename":"YPL031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01825","ortholog_taxonid":4932,"ortholog_uniquename":"YPL031C","reference_uniquename":"PMID:26896847"}],"product":"cyclin-dependent protein kinase Pho85/PhoA-like Pef1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004693"]}},"subset_termids":["GO:0023052","GO:0005829","GO:0140096","GO:0005634","GO:0016301","GO:0004672","MONDO:0002320","GO:0044772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004693":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0007089":null,"GO:0007165":null,"GO:0042764":null,"GO:0045875":null,"MONDO:0014596":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01825.1"],"transcripts_by_uniquename":{"SJAG_01825.1":null},"uniprot_identifier":"B6JZ02","uniquename":"SJAG_01825"}


id: SJAG_01826
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115738],"is_not":false,"summary":null,"term":"GO:0051604"},{"annotations":[78259],"is_not":false,"summary":null,"term":"GO:0032956"}],"cellular_component":[{"annotations":[115735],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[78257],"is_not":false,"summary":null,"term":"GO:0031416"},{"annotations":[115737],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[115740],"is_not":false,"summary":null,"term":"GO:0120518"}],"mondo":[{"annotations":[87449],"is_not":false,"summary":null,"term":"MONDO:0030533"}]},"dbxrefs":["InterPro:IPR000182","UniProtKB/TrEMBL:B6JZ03","EnsemblGenomes-Tr:EEB06771","GOA:B6JZ03","InterPro:IPR016181","EnsemblGenomes-Gn:SJAG_01826"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"skb15","uniquename":"SJAG_01821"},{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"}],"genes_by_uniquename":{"HGNC:15908":null,"SJAG_01826":null,"SPCC16C4.12":null,"YPR131C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Acetyltransferase (GNAT) family","id":"PF00583","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":178,"start":65}],"match_end":178,"match_start":65,"name":"Acetyltransf_1"},{"dbname":"CDD","description":"NAT_SF","id":"cd04301","locations":[{"end":160,"start":105}],"match_end":160,"match_start":105,"name":"NAT_SF"},{"dbname":"PROSITE_PROFILES","description":"Gcn5-related N-acetyltransferase (GNAT) domain profile.","id":"PS51186","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":206,"start":49}],"match_end":206,"match_start":49,"name":"GNAT"},{"dbname":"SUPERFAMILY","id":"SSF55729","interpro_description":"Acyl-CoA N-acyltransferase","interpro_id":"IPR016181","interpro_name":"Acyl_CoA_acyltransferase","locations":[{"end":205,"start":52}],"match_end":205,"match_start":52,"name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"GENE3D","id":"G3DSA:3.40.630.30","locations":[{"end":227,"start":50}],"match_end":227,"match_start":50},{"dbname":"PANTHER","id":"PTHR45910","interpro_description":"N-terminal NatB acetyltransferase catalytic subunit","interpro_id":"IPR051646","interpro_name":"NatB_acetyltransferase_subunit","locations":[{"end":228,"start":48}],"match_end":228,"match_start":48,"name":"N-ALPHA-ACETYLTRANSFERASE 20"}],"location":{"chromosome_name":"supercont5.3","end_pos":2434204,"start_pos":2433466,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":37,"start":23}}],"name":"naa20","ortholog_annotations":[{"gene_uniquename":"SJAG_01826","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15908","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01826","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01826","ortholog_taxonid":4932,"ortholog_uniquename":"YPR131C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01826","ortholog_taxonid":4932,"ortholog_uniquename":"YPR131C","reference_uniquename":"PMID:26896847"}],"product":"NatB N-acetyltransferase complex catalytic subunit Naa20","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0120518"]}},"subset_termids":["MONDO:0037792","GO:0016746","GO:0051604","GO:0005634","MONDO:0005066","GO:0034212","MONDO:0006025","GO:0005829","GO:0030036"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0031416":null,"GO:0032956":null,"GO:0051604":null,"GO:0120518":null,"MONDO:0030533":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01826.1"],"transcripts_by_uniquename":{"SJAG_01826.1":null},"uniprot_identifier":"B6JZ03","uniquename":"SJAG_01826"}


id: SJAG_01827
data:
  {"coiled_coil_coords":[{"range":{"end":260,"start":240}}],"cv_annotations":{"biological_process":[{"annotations":[115758],"is_not":false,"summary":null,"term":"GO:0006384"}],"cellular_component":[{"annotations":[115755],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[115756],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[76847],"is_not":false,"summary":null,"term":"GO:0000127"}],"molecular_function":[{"annotations":[115759],"is_not":false,"summary":null,"term":"GO:0043035"},{"annotations":[115760],"is_not":false,"summary":null,"term":"GO:0000995"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06773","InterPro:IPR011990","UniProtKB/TrEMBL:B6JZ05","InterPro:IPR013026","EnsemblGenomes-Gn:SJAG_01827","InterPro:IPR039340","InterPro:IPR019734","GOA:B6JZ05"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":558,"start":527}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"}],"genes_by_uniquename":{"HGNC:4666":null,"SJAG_01827":null,"SPCC16C4.14c":null,"YGR047C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13181","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":294,"start":270},{"end":946,"start":917}],"match_end":946,"match_start":270,"name":"TPR_8"},{"dbname":"PROSITE_PROFILES","description":"TPR repeat profile.","id":"PS50005","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":949,"start":916}],"match_end":949,"match_start":916,"name":"TPR"},{"dbname":"SMART","id":"SM00028","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":229,"start":123},{"end":301,"start":234},{"end":524,"start":457},{"end":949,"start":916}],"match_end":949,"match_start":123,"name":"tpr_5"},{"dbname":"FUNFAM","description":"Transcription factor tau subunit sfc4","id":"G3DSA:1.25.40.10:FF:003725","locations":[{"end":351,"start":86}],"match_end":351,"match_start":86},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":308,"start":133},{"end":521,"start":394},{"end":890,"start":833},{"end":998,"start":918}],"match_end":998,"match_start":133,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":354,"start":115},{"end":552,"start":373},{"end":744,"start":630},{"end":1000,"start":800}],"match_end":1000,"match_start":115,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR23082","interpro_description":"Transcription factor Tfc4/TFIIIC-102/Sfc4","interpro_id":"IPR039340","interpro_name":"Tfc4/TFIIIC-102/Sfc4","locations":[{"end":1001,"start":80}],"match_end":1001,"match_start":80,"name":"TRANSCRIPTION INITIATION FACTOR IIIC  TFIIIC , POLYPEPTIDE 3-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":260,"start":240}],"match_end":260,"match_start":240,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":558,"start":527}],"match_end":558,"match_start":527,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":539,"start":527}],"match_end":539,"match_start":527,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":556,"start":540}],"match_end":556,"match_start":540,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2438570,"start_pos":2435565,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":113,"start":99}},{"range":{"end":367,"start":352}},{"range":{"end":538,"start":526}}],"name":"sfc4","ortholog_annotations":[{"gene_uniquename":"SJAG_01827","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4666","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01827","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01827","ortholog_taxonid":4932,"ortholog_uniquename":"YGR047C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01827","ortholog_taxonid":4932,"ortholog_uniquename":"YGR047C","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIIIC complex subunit Sfc4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043035"],"not-binding":["GO:0000995"]}},"subset_termids":["GO:0140223","GO:0005829","GO:0005634","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000127":null,"GO:0000995":null,"GO:0005634":null,"GO:0005829":null,"GO:0006384":null,"GO:0043035":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01827.1"],"transcripts_by_uniquename":{"SJAG_01827.1":null},"uniprot_identifier":"B6JZ05","uniquename":"SJAG_01827"}


id: SJAG_01828
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB06774","UniProtKB/TrEMBL:B6JZ06","EnsemblGenomes-Gn:SJAG_01828"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":43,"start":1}},{"range":{"end":178,"start":155}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"}],"genes_by_uniquename":{"SJAG_01828":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":43,"start":1},{"end":178,"start":155}],"match_end":178,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":33,"start":19}],"match_end":33,"match_start":19,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":18,"start":1}],"match_end":18,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2440253,"start_pos":2439609,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":32,"start":18}},{"range":{"end":144,"start":123}},{"range":{"end":186,"start":173}}],"product":"Schizosaccharomyces japonicus specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01828.1"],"transcripts_by_uniquename":{"SJAG_01828.1":null},"uniprot_identifier":"B6JZ06","uniquename":"SJAG_01828"}


id: SJAG_01829
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75791],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[75790],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[75788],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[75789],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01829","InterPro:IPR022669","InterPro:IPR002171","InterPro:IPR008991","InterPro:IPR014726","InterPro:IPR012340","InterPro:IPR022666","EnsemblGenomes-Tr:EEB06775","InterPro:IPR005880","GOA:B6JZ07","UniProtKB/TrEMBL:B6JZ07","InterPro:IPR014722"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":355,"start":307}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"}],"genes_by_uniquename":{"HGNC:14056":null,"SJAG_01829":null,"SPCC16C4.15":null,"YEL050C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal Proteins L2, C-terminal domain","id":"PF03947","interpro_description":"Large ribosomal subunit protein uL2, C-terminal","interpro_id":"IPR022669","interpro_name":"Ribosomal_uL2_C","locations":[{"end":325,"start":199}],"match_end":325,"match_start":199,"name":"Ribosomal_L2_C"},{"dbname":"PFAM","description":"Ribosomal Proteins L2, RNA binding domain","id":"PF00181","interpro_description":"Large ribosomal subunit protein uL2, RNA-binding domain","interpro_id":"IPR022666","interpro_name":"Ribosomal_uL2_RNA-bd_dom","locations":[{"end":171,"start":95}],"match_end":171,"match_start":95,"name":"Ribosomal_L2"},{"dbname":"SMART","id":"SM01383","interpro_description":"Large ribosomal subunit protein uL2","interpro_id":"IPR002171","interpro_name":"Ribosomal_uL2","locations":[{"end":171,"start":95}],"match_end":171,"match_start":95,"name":"Ribosomal_L2_2"},{"dbname":"SMART","id":"SM01382","interpro_description":"Large ribosomal subunit protein uL2, C-terminal","interpro_id":"IPR022669","interpro_name":"Ribosomal_uL2_C","locations":[{"end":327,"start":198}],"match_end":327,"match_start":198,"name":"Ribosomal_L2_C_2"},{"dbname":"FUNFAM","description":"50S ribosomal protein L2","id":"G3DSA:2.40.50.140:FF:000128","locations":[{"end":167,"start":54}],"match_end":167,"match_start":54},{"dbname":"FUNFAM","description":"50S ribosomal protein L2","id":"G3DSA:4.10.950.10:FF:000001","locations":[{"end":351,"start":271}],"match_end":351,"match_start":271},{"dbname":"SUPERFAMILY","id":"SSF50104","interpro_description":"Translation protein SH3-like domain superfamily","interpro_id":"IPR008991","interpro_name":"Translation_prot_SH3-like_sf","locations":[{"end":346,"start":201}],"match_end":346,"match_start":201,"name":"Translation proteins SH3-like domain"},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":171,"start":56}],"match_end":171,"match_start":56,"name":"Nucleic acid-binding proteins"},{"dbname":"GENE3D","id":"G3DSA:4.10.950.10","interpro_description":"Large ribosomal subunit protein uL2, domain 3","interpro_id":"IPR014726","interpro_name":"Ribosomal_uL2_dom3","locations":[{"end":349,"start":272}],"match_end":349,"match_start":272,"name":"Ribosomal protein L2, domain 3"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.30","interpro_description":"Large ribosomal subunit protein uL2, domain 2","interpro_id":"IPR014722","interpro_name":"Rib_uL2_dom2","locations":[{"end":271,"start":195}],"match_end":271,"match_start":195},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":167,"start":54}],"match_end":167,"match_start":54},{"dbname":"PANTHER","id":"PTHR13691","interpro_description":"Large ribosomal subunit protein uL2","interpro_id":"IPR002171","interpro_name":"Ribosomal_uL2","locations":[{"end":347,"start":85}],"match_end":347,"match_start":85,"name":"RIBOSOMAL PROTEIN L2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":355,"start":307}],"match_end":355,"match_start":307,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":355,"start":331}],"match_end":355,"match_start":331,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L2","id":"TIGR01171","interpro_description":"Large ribosomal subunit protein uL2, bacterial/organellar-type","interpro_id":"IPR005880","interpro_name":"Ribosomal_uL2_bac/org-type","locations":[{"end":347,"start":56}],"match_end":347,"match_start":56,"name":"rplB_bact"}],"location":{"chromosome_name":"supercont5.3","end_pos":2441727,"start_pos":2440596,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":16,"start":1}},{"range":{"end":311,"start":307}}],"name":"rml2","ortholog_annotations":[{"gene_uniquename":"SJAG_01829","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14056","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01829","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01829","ortholog_taxonid":4932,"ortholog_uniquename":"YEL050C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L2","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005739","GO:0005198","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01829.1"],"transcripts_by_uniquename":{"SJAG_01829.1":null},"uniprot_identifier":"B6JZ07","uniquename":"SJAG_01829"}


id: SJAG_01830
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115768],"is_not":false,"summary":null,"term":"GO:0071039"},{"annotations":[115769],"is_not":false,"summary":null,"term":"GO:0000184"}],"cellular_component":[{"annotations":[115765],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[115766],"is_not":false,"summary":null,"term":"GO:0005846"},{"annotations":[115767],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[65734],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[65733],"is_not":false,"summary":null,"term":"GO:0000340"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06776","InterPro:IPR019416","UniProtKB/TrEMBL:B6JZ08","EnsemblGenomes-Gn:SJAG_01830","GOA:B6JZ08"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":219,"start":157}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"}],"genes_by_uniquename":{"HGNC:24612":null,"SJAG_01830":null,"SPCC16C4.16c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nuclear cap-binding protein subunit 3","id":"PF10309","interpro_description":"Nuclear cap-binding protein subunit 3","interpro_id":"IPR019416","interpro_name":"NCBP3","locations":[{"end":100,"start":44}],"match_end":100,"match_start":44,"name":"NCBP3"},{"dbname":"PANTHER","id":"PTHR16291","interpro_description":"Nuclear cap-binding protein subunit 3","interpro_id":"IPR019416","interpro_name":"NCBP3","locations":[{"end":113,"start":31}],"match_end":113,"match_start":31,"name":"NUCLEAR CAP-BINDING PROTEIN SUBUNIT 3"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":219,"start":157}],"match_end":219,"match_start":157,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":184,"start":173}],"match_end":184,"match_start":173,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":172,"start":157}],"match_end":172,"match_start":157,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":219,"start":207}],"match_end":219,"match_start":207,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2442615,"start_pos":2441846,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":217,"start":203}}],"name":"cbc3","ortholog_annotations":[{"gene_uniquename":"SJAG_01830","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24612","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01830","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.16c","reference_uniquename":"PMID:21511999"}],"product":"nuclear cap-binding complex variant subunit Cbc3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000340","GO:0003729"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000184":null,"GO:0000340":null,"GO:0003729":null,"GO:0005634":null,"GO:0005829":null,"GO:0005846":null,"GO:0071039":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01830.1"],"transcripts_by_uniquename":{"SJAG_01830.1":null},"uniprot_identifier":"B6JZ08","uniquename":"SJAG_01830"}


id: SJAG_01831
data:
  {"coiled_coil_coords":[{"range":{"end":223,"start":203}},{"range":{"end":280,"start":253}},{"range":{"end":371,"start":316}},{"range":{"end":450,"start":423}},{"range":{"end":492,"start":458}},{"range":{"end":780,"start":753}},{"range":{"end":902,"start":833}},{"range":{"end":1062,"start":1028}}],"cv_annotations":{"biological_process":[{"annotations":[108112],"is_not":false,"summary":null,"term":"GO:0140588"},{"annotations":[108114],"is_not":false,"summary":null,"term":"GO:0007064"}],"cellular_component":[{"annotations":[108108],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[108109],"is_not":false,"summary":null,"term":"GO:0030893"},{"annotations":[108110],"is_not":false,"summary":null,"term":"GO:0030892"},{"annotations":[71399],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[58440],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[58441],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[108117],"is_not":false,"summary":null,"term":"GO:0061776"}],"mondo":[{"annotations":[87390],"is_not":false,"summary":null,"term":"MONDO:0010370"},{"annotations":[86256],"is_not":false,"summary":null,"term":"MONDO:0026771"}]},"dbxrefs":["InterPro:IPR003395","InterPro:IPR010935","InterPro:IPR024704","InterPro:IPR036277","EnsemblGenomes-Gn:SJAG_01831","GOA:B6JZ09","UniProtKB/TrEMBL:B6JZ09","InterPro:IPR027417","EnsemblGenomes-Tr:EEB06777"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"}],"genes_by_uniquename":{"HGNC:11111":null,"HGNC:11112":null,"SJAG_01831":null,"SPBC29A10.04":null,"YFL008W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SMC proteins Flexible Hinge Domain","id":"PF06470","interpro_description":"SMCs flexible hinge","interpro_id":"IPR010935","interpro_name":"SMC_hinge","locations":[{"end":637,"start":522}],"match_end":637,"match_start":522,"name":"SMC_hinge"},{"dbname":"PFAM","description":"RecF/RecN/SMC N terminal domain","id":"PF02463","interpro_description":"RecF/RecN/SMC, N-terminal","interpro_id":"IPR003395","interpro_name":"RecF/RecN/SMC_N","locations":[{"end":521,"start":4},{"end":1215,"start":638}],"match_end":1215,"match_start":4,"name":"SMC_N"},{"dbname":"CDD","description":"ABC_SMC1_euk","id":"cd03275","interpro_description":"Smc1, ATP-binding cassette domain","interpro_id":"IPR028468","interpro_name":"Smc1_ABC","locations":[{"end":159,"start":4},{"end":1227,"start":1124}],"match_end":1227,"match_start":4,"name":"ABC_SMC1_euk"},{"dbname":"SMART","id":"SM00968","interpro_description":"SMCs flexible hinge","interpro_id":"IPR010935","interpro_name":"SMC_hinge","locations":[{"end":637,"start":521}],"match_end":637,"match_start":521,"name":"SMC_hinge_2"},{"dbname":"SUPERFAMILY","id":"SSF75553","interpro_description":"SMCs flexible hinge superfamily","interpro_id":"IPR036277","interpro_name":"SMC_hinge_sf","locations":[{"end":682,"start":482}],"match_end":682,"match_start":482,"name":"Smc hinge domain"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":171,"start":1},{"end":445,"start":414},{"end":1214,"start":1111}],"match_end":1214,"match_start":1,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:1.20.1060.20","locations":[{"end":581,"start":502},{"end":670,"start":667}],"match_end":670,"match_start":502},{"dbname":"GENE3D","id":"G3DSA:3.30.70.1620","locations":[{"end":666,"start":582}],"match_end":666,"match_start":582},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":231,"start":1},{"end":1231,"start":963}],"match_end":1231,"match_start":1},{"dbname":"PANTHER","id":"PTHR18937","locations":[{"end":1230,"start":3}],"match_end":1230,"match_start":3,"name":"STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF005719","interpro_description":"Structural maintenance of chromosomes protein","interpro_id":"IPR024704","interpro_name":"SMC","locations":[{"end":1231,"start":1}],"match_end":1231,"match_start":1,"name":"SMC"},{"dbname":"COILS","id":"Coil","locations":[{"end":223,"start":203},{"end":280,"start":253},{"end":371,"start":316},{"end":450,"start":423},{"end":492,"start":458},{"end":780,"start":753},{"end":902,"start":833},{"end":1062,"start":1028}],"match_end":1062,"match_start":203,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2446554,"start_pos":2442806,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":86,"start":70}},{"range":{"end":719,"start":708}}],"name":"psm1","ortholog_annotations":[{"gene_uniquename":"SJAG_01831","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11111","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01831","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11112","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01831","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC29A10.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01831","ortholog_taxonid":4932,"ortholog_uniquename":"YFL008W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01831","ortholog_taxonid":4932,"ortholog_uniquename":"YFL008W","reference_uniquename":"PMID:26896847"}],"product":"mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0061776","GO:0005524"],"not-binding":["GO:0016887"]}},"subset_termids":["GO:0016887","MONDO:0700092","MONDO:0005027","GO:0005634","GO:0006325","GO:0005694","GO:0061776"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000779":null,"GO:0005524":null,"GO:0005634":null,"GO:0007064":null,"GO:0016887":null,"GO:0030892":null,"GO:0030893":null,"GO:0061776":null,"GO:0140588":null,"MONDO:0010370":null,"MONDO:0026771":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01831.1"],"transcripts_by_uniquename":{"SJAG_01831.1":null},"uniprot_identifier":"B6JZ09","uniquename":"SJAG_01831"}


id: SJAG_01832
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108123],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[108124],"is_not":false,"summary":null,"term":"GO:0043570"},{"annotations":[108125],"is_not":false,"summary":null,"term":"GO:0000706"},{"annotations":[108126],"is_not":false,"summary":null,"term":"GO:0000710"},{"annotations":[108128],"is_not":false,"summary":null,"term":"GO:0006312"},{"annotations":[108129],"is_not":false,"summary":null,"term":"GO:1990426"},{"annotations":[108131],"is_not":false,"summary":null,"term":"GO:0000723"}],"cellular_component":[{"annotations":[108119],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[73193],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[108121],"is_not":false,"summary":null,"term":"GO:0035861"}],"molecular_function":[{"annotations":[73194],"is_not":false,"summary":null,"term":"GO:0017108"},{"annotations":[108133],"is_not":false,"summary":null,"term":"GO:0051908"},{"annotations":[108134],"is_not":false,"summary":null,"term":"GO:0003690"},{"annotations":[60578],"is_not":false,"summary":null,"term":"GO:0046872"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ10","InterPro:IPR036279","InterPro:IPR006084","InterPro:IPR029060","InterPro:IPR006085","GOA:B6JZ10","InterPro:IPR006086","InterPro:IPR032641","EnsemblGenomes-Tr:EEB06778","EnsemblGenomes-Gn:SJAG_01832","InterPro:IPR008918","InterPro:IPR019974","InterPro:IPR037315"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":490,"start":388}},{"range":{"end":566,"start":504}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"}],"genes_by_uniquename":{"HGNC:3511":null,"SJAG_01832":null,"SPBC29A10.05":null,"YDR263C":null,"YOR033C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"XPG I-region","id":"PF00867","interpro_description":"XPG-I domain","interpro_id":"IPR006086","interpro_name":"XPG-I_dom","locations":[{"end":226,"start":141}],"match_end":226,"match_start":141,"name":"XPG_I"},{"dbname":"PFAM","description":"XPG N-terminal domain","id":"PF00752","interpro_description":"XPG, N-terminal","interpro_id":"IPR006085","interpro_name":"XPG_DNA_repair_N","locations":[{"end":99,"start":1}],"match_end":99,"match_start":1,"name":"XPG_N"},{"dbname":"CDD","description":"PIN_EXO1","id":"cd09857","interpro_description":"Exonuclease 1-like, PIN-like domain","interpro_id":"IPR044752","interpro_name":"PIN-like_EXO1","locations":[{"end":202,"start":1}],"match_end":202,"match_start":1,"name":"PIN_EXO1"},{"dbname":"CDD","description":"H3TH_EXO1","id":"cd09908","interpro_description":"Exonuclease-1, H3TH domain","interpro_id":"IPR037315","interpro_name":"EXO1_H3TH","locations":[{"end":286,"start":215}],"match_end":286,"match_start":215,"name":"H3TH_EXO1"},{"dbname":"PROSITE_PATTERNS","description":"XPG protein signature 2.","id":"PS00842","interpro_description":"XPG conserved site","interpro_id":"IPR019974","interpro_name":"XPG_CS","locations":[{"end":155,"start":141}],"match_end":155,"match_start":141,"name":"XPG_2"},{"dbname":"SMART","id":"SM00484","interpro_description":"XPG-I domain","interpro_id":"IPR006086","interpro_name":"XPG-I_dom","locations":[{"end":206,"start":138}],"match_end":206,"match_start":138,"name":"xpgineu"},{"dbname":"SMART","id":"SM00279","interpro_description":"Helix-hairpin-helix motif, class 2","interpro_id":"IPR008918","interpro_name":"HhH2","locations":[{"end":246,"start":213}],"match_end":246,"match_start":213,"name":"HhH_4"},{"dbname":"SMART","id":"SM00485","interpro_description":"XPG, N-terminal","interpro_id":"IPR006085","interpro_name":"XPG_DNA_repair_N","locations":[{"end":99,"start":1}],"match_end":99,"match_start":1,"name":"xpgn3"},{"dbname":"PRINTS","description":"Xeroderma pigmentosum group G/yeast RAD superfamily signature","id":"PR00853","interpro_description":"XPG/Rad2 endonuclease","interpro_id":"IPR006084","interpro_name":"XPG/Rad2","locations":[{"end":38,"start":24},{"end":92,"start":73},{"end":154,"start":137},{"end":178,"start":158},{"end":231,"start":216}],"match_end":231,"match_start":24,"name":"XPGRADSUPER"},{"dbname":"FUNFAM","description":"exonuclease 1","id":"G3DSA:1.10.150.20:FF:000011","locations":[{"end":282,"start":209}],"match_end":282,"match_start":209},{"dbname":"FUNFAM","description":"Exonuclease 1, putative","id":"G3DSA:3.40.50.1010:FF:000002","locations":[{"end":207,"start":1}],"match_end":207,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF88723","interpro_description":"PIN-like domain superfamily","interpro_id":"IPR029060","interpro_name":"PIN-like_dom_sf","locations":[{"end":226,"start":2}],"match_end":226,"match_start":2,"name":"PIN domain-like"},{"dbname":"SUPERFAMILY","id":"SSF47807","interpro_description":"5'-3' exonuclease, C-terminal domain superfamily","interpro_id":"IPR036279","interpro_name":"5-3_exonuclease_C_sf","locations":[{"end":338,"start":212}],"match_end":338,"match_start":212,"name":"5' to 3' exonuclease, C-terminal subdomain"},{"dbname":"GENE3D","id":"G3DSA:1.10.150.20","locations":[{"end":282,"start":209}],"match_end":282,"match_start":209},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1010","locations":[{"end":206,"start":1}],"match_end":206,"match_start":1},{"dbname":"PANTHER","id":"PTHR11081","interpro_description":"XPG/Rad2 endonuclease","interpro_id":"IPR006084","interpro_name":"XPG/Rad2","locations":[{"end":499,"start":1}],"match_end":499,"match_start":1,"name":"FLAP ENDONUCLEASE FAMILY MEMBER"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":490,"start":388},{"end":566,"start":504}],"match_end":566,"match_start":388,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":555,"start":538}],"match_end":555,"match_start":538,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":441,"start":420},{"end":490,"start":475}],"match_end":490,"match_start":420,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2448604,"start_pos":2446835,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":101,"start":88}},{"range":{"end":554,"start":537}}],"name":"exo1","ortholog_annotations":[{"gene_uniquename":"SJAG_01832","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3511","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01832","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC29A10.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01832","ortholog_taxonid":4932,"ortholog_uniquename":"YDR263C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01832","ortholog_taxonid":4932,"ortholog_uniquename":"YDR263C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01832","ortholog_taxonid":4932,"ortholog_uniquename":"YOR033C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01832","ortholog_taxonid":4932,"ortholog_uniquename":"YOR033C","reference_uniquename":"PMID:26896847"}],"product":"exonuclease I Exo1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003690","GO:0046872"],"not-binding":["GO:0051908","GO:0017108"]}},"subset_termids":["GO:0006260","GO:0006281","GO:0072686","GO:0005694","GO:0006310","GO:0005634","GO:0140097","GO:0015630","GO:0004527","GO:0016788","GO:0032200"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000706":null,"GO:0000710":null,"GO:0000723":null,"GO:0000724":null,"GO:0003690":null,"GO:0005634":null,"GO:0006312":null,"GO:0017108":null,"GO:0035861":null,"GO:0043570":null,"GO:0046872":null,"GO:0051908":null,"GO:0072686":null,"GO:1990426":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01832.1"],"transcripts_by_uniquename":{"SJAG_01832.1":null},"uniprot_identifier":"B6JZ10","uniquename":"SJAG_01832"}


id: SJAG_01833
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108139],"is_not":false,"summary":null,"term":"GO:0051292"}],"cellular_component":[{"annotations":[108136],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108137],"is_not":false,"summary":null,"term":"GO:0005643"}]},"dbxrefs":["InterPro:IPR025151","EnsemblGenomes-Gn:SJAG_01833","UniProtKB/TrEMBL:B6JZ11","EnsemblGenomes-Tr:EEB06779","GOA:B6JZ11"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:28954740","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"}],"genes_by_uniquename":{"HGNC:24618":null,"SJAG_01833":null,"SPBC29A10.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nuclear pore complex assembly","id":"PF13934","interpro_description":"ELYS-like domain","interpro_id":"IPR025151","interpro_name":"ELYS_dom","locations":[{"end":245,"start":41}],"match_end":245,"match_start":41,"name":"ELYS"}],"location":{"chromosome_name":"supercont5.3","end_pos":2450038,"start_pos":2448888,"strand":"reverse"},"name":"ely5","ortholog_annotations":[{"gene_uniquename":"SJAG_01833","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24618","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01833","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC29A10.06c","reference_uniquename":"PMID:21511999"}],"product":"nuclear pore protein Ely5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:28954740":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0065003","GO:0005829","GO:0005634","GO:0005643"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005643":null,"GO:0005829":null,"GO:0051292":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01833.1"],"transcripts_by_uniquename":{"SJAG_01833.1":null},"uniprot_identifier":"B6JZ11","uniquename":"SJAG_01833"}


id: SJAG_01834
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[74437],"is_not":false,"summary":null,"term":"GO:0006999"},{"annotations":[74436],"is_not":false,"summary":null,"term":"GO:0006606"}],"cellular_component":[{"annotations":[119876],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[74438],"is_not":false,"summary":null,"term":"GO:0070762"}],"molecular_function":[{"annotations":[62100],"is_not":false,"summary":null,"term":"GO:0017056"}],"single_locus_phenotype":[{"annotations":[119759],"is_not":false,"summary":null,"term":"FYPO:0004890"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01834","InterPro:IPR037701","EnsemblGenomes-Tr:EEB06780","GOA:B6JZ12","UniProtKB/TrEMBL:B6JZ12"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:33495454","source":"canto"},{"reference_uniquename":"PMID:24184107","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"}],"genes_by_uniquename":{"HGNC:30052":null,"SJAG_01834":null,"SPBC29A10.07":null,"YMR129W":null},"genotypes_by_uniquename":{"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleoporin pom152-like, first immunoglobulin-like domain","id":"PF24519","interpro_description":"Nucleoporin POM152, first Ig-like domain","interpro_id":"IPR056542","interpro_name":"Ig-like_POM152_1st","locations":[{"end":275,"start":160}],"match_end":275,"match_start":160,"name":"Ig-like_Pom152_1"},{"dbname":"PFAM","description":"Nucleoporin POM152, Ig-like domain","id":"PF24312","interpro_description":"Nucleoporin POM152, Ig-like domain","interpro_id":"IPR056541","interpro_name":"Ig-like_POM152","locations":[{"end":531,"start":430},{"end":829,"start":741}],"match_end":829,"match_start":430,"name":"Ig-like_POM152"},{"dbname":"PFAM","description":"Nucleoporin pom152-like, immunoglobulin-like domain","id":"PF23664","interpro_description":"Nucleoporin POM152, immunoglobulin-like domain","interpro_id":"IPR056544","interpro_name":"Ig_POM152","locations":[{"end":635,"start":536},{"end":937,"start":868}],"match_end":937,"match_start":536,"name":"Ig_Pom152"},{"dbname":"PFAM","description":"Nucleoporin pom152-like, ninth immunoglobulin-like domain","id":"PF24527","interpro_description":"Nucleoporin POM152, ninth Ig-like domain","interpro_id":"IPR056543","interpro_name":"Ig-like_POM152_9th","locations":[{"end":1143,"start":1072}],"match_end":1143,"match_start":1072,"name":"Ig-like_Pom152_9"},{"dbname":"PFAM","description":"Nucleoporin POM152, N-terminal transmembrane domain","id":"PF24097","interpro_description":"Nucleoporin POM152, N-terminal transmembrane domain","interpro_id":"IPR056540","interpro_name":"TMD_POM152","locations":[{"end":106,"start":21}],"match_end":106,"match_start":21,"name":"TMD_POM152"},{"dbname":"PANTHER","id":"PTHR28206","interpro_description":"Nucleoporin Pom152","interpro_id":"IPR037701","interpro_name":"Pom152","locations":[{"end":1248,"start":5}],"match_end":1248,"match_start":5,"name":"NUCLEOPORIN POM152"}],"location":{"chromosome_name":"supercont5.3","end_pos":2453925,"start_pos":2450173,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":1190,"start":1179}}],"name":"pom152","ortholog_annotations":[{"gene_uniquename":"SJAG_01834","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30052","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01834","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC29A10.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01834","ortholog_taxonid":4932,"ortholog_uniquename":"YMR129W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01834","ortholog_taxonid":4932,"ortholog_uniquename":"YMR129W","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin, transmembrane ring glycoprotein subunit Pom152","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:24184107":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:33495454":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0017056"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0004890"]}},"subset_termids":["GO:0006913","GO:0005198","FYPO:0000138","GO:0005634","GO:0005643","FYPO:0001320"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYPO:0004890":null,"FYPO_EXT:0000002":null,"GO:0005643":null,"GO:0006606":null,"GO:0006999":null,"GO:0017056":null,"GO:0070762":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":49,"start":27}},{"assigned_by":"TMHMM","range":{"end":83,"start":64}},{"assigned_by":"TMHMM","range":{"end":118,"start":96}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01834.1"],"transcripts_by_uniquename":{"SJAG_01834.1":null},"uniprot_identifier":"B6JZ12","uniquename":"SJAG_01834"}


id: SJAG_01835
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":459,"start":20}}],"cv_annotations":{"biological_process":[{"annotations":[71306],"is_not":false,"summary":null,"term":"GO:0071970"},{"annotations":[71305],"is_not":false,"summary":null,"term":"GO:0031505"}],"cellular_component":[{"annotations":[108146],"is_not":false,"summary":null,"term":"GO:0043188"},{"annotations":[108147],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[108148],"is_not":false,"summary":null,"term":"GO:0009897"},{"annotations":[108149],"is_not":false,"summary":null,"term":"GO:0005576"}],"molecular_function":[{"annotations":[71303],"is_not":false,"summary":null,"term":"GO:0042124"}],"sequence":[{"annotations":[81083],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ13","GOA:B6JZ13","InterPro:IPR017853","EnsemblGenomes-Gn:SJAG_01835","InterPro:IPR004886","EnsemblGenomes-Tr:EEB06781","InterPro:IPR012946"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"}],"genes_by_uniquename":{"SJAG_01835":null,"SPBC29A10.08":null,"YLR343W":null,"YMR215W":null,"YOL132W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"X8 domain","id":"PF07983","interpro_description":"X8 domain","interpro_id":"IPR012946","interpro_name":"X8","locations":[{"end":455,"start":381}],"match_end":455,"match_start":381,"name":"X8"},{"dbname":"PFAM","description":"Glucanosyltransferase","id":"PF03198","interpro_description":"Glucanosyltransferase","interpro_id":"IPR004886","interpro_name":"Glucanosyltransferase","locations":[{"end":330,"start":19}],"match_end":330,"match_start":19,"name":"Glyco_hydro_72"},{"dbname":"SMART","id":"SM00768","interpro_description":"X8 domain","interpro_id":"IPR012946","interpro_name":"X8","locations":[{"end":459,"start":380}],"match_end":459,"match_start":380,"name":"X8_cls"},{"dbname":"FUNFAM","description":"1,3-beta-glucanosyltransferase","id":"G3DSA:3.20.20.80:FF:000038","locations":[{"end":337,"start":16}],"match_end":337,"match_start":16},{"dbname":"SUPERFAMILY","id":"SSF51445","interpro_description":"Glycoside hydrolase superfamily","interpro_id":"IPR017853","interpro_name":"Glycoside_hydrolase_SF","locations":[{"end":310,"start":40}],"match_end":310,"match_start":40,"name":"(Trans)glycosidases"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.1040","locations":[{"end":459,"start":352}],"match_end":459,"match_start":352},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":337,"start":16}],"match_end":337,"match_start":16,"name":"Glycosidases"},{"dbname":"PANTHER","id":"PTHR31468","interpro_description":"Glucanosyltransferase","interpro_id":"IPR004886","interpro_name":"Glucanosyltransferase","locations":[{"end":445,"start":14}],"match_end":445,"match_start":14,"name":"1,3-BETA-GLUCANOSYLTRANSFERASE GAS1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2456521,"start_pos":2455142,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":168,"start":155}}],"name":"gas2","ortholog_annotations":[{"gene_uniquename":"SJAG_01835","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC29A10.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01835","ortholog_taxonid":4932,"ortholog_uniquename":"YLR343W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01835","ortholog_taxonid":4932,"ortholog_uniquename":"YMR215W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01835","ortholog_taxonid":4932,"ortholog_uniquename":"YOL132W","reference_uniquename":"PMID:26896847"}],"product":"cell wall 1,3-beta-glucanosyltransferase Gas2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":19,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0042124"]}},"subset_termids":["GO:0071554","GO:0005618","GO:0005886","GO:0042124","GO:0005975","GO:0005576","GO:0009986"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005576":null,"GO:0009897":null,"GO:0031505":null,"GO:0042124":null,"GO:0043188":null,"GO:0051286":null,"GO:0071970":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01835.1"],"transcripts_by_uniquename":{"SJAG_01835.1":null},"uniprot_identifier":"B6JZ13","uniquename":"SJAG_01835"}


id: SJAG_01836
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71572],"is_not":false,"summary":null,"term":"GO:1990431"},{"annotations":[108156],"is_not":false,"summary":null,"term":"GO:0031048"},{"annotations":[71573],"is_not":false,"summary":null,"term":"GO:1990432"}],"cellular_component":[{"annotations":[108153],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[71570],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[108159],"is_not":false,"summary":null,"term":"GO:0004535"},{"annotations":[71571],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[85643],"is_not":false,"summary":null,"term":"MONDO:0014600"},{"annotations":[85654],"is_not":false,"summary":null,"term":"MONDO:0014612"}]},"dbxrefs":["InterPro:IPR006941","EnsemblGenomes-Tr:EEB06782","InterPro:IPR036397","UniProtKB/TrEMBL:B6JZ14","InterPro:IPR012337","EnsemblGenomes-Gn:SJAG_01836","GOA:B6JZ14","InterPro:IPR036867"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":411,"start":364}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"psm1","uniquename":"SJAG_01831"},{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"}],"genes_by_uniquename":{"HGNC:8609":null,"SJAG_01836":null,"SPBC29A10.09c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CAF1 family ribonuclease","id":"PF04857","interpro_description":"Ribonuclease CAF1","interpro_id":"IPR006941","interpro_name":"RNase_CAF1","locations":[{"end":403,"start":3}],"match_end":403,"match_start":3,"name":"CAF1"},{"dbname":"SUPERFAMILY","id":"SSF53098","interpro_description":"Ribonuclease H-like superfamily","interpro_id":"IPR012337","interpro_name":"RNaseH-like_sf","locations":[{"end":135,"start":1},{"end":363,"start":260}],"match_end":363,"match_start":1,"name":"Ribonuclease H-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.10","interpro_description":"Ribonuclease H superfamily","interpro_id":"IPR036397","interpro_name":"RNaseH_sf","locations":[{"end":404,"start":1}],"match_end":404,"match_start":1},{"dbname":"PANTHER","id":"PTHR15092","interpro_description":"CAF1 family poly(A)-specific ribonucleases","interpro_id":"IPR051181","interpro_name":"CAF1_poly(A)_ribonucleases","locations":[{"end":403,"start":1}],"match_end":403,"match_start":1,"name":"POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":411,"start":364}],"match_end":411,"match_start":364,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2458086,"start_pos":2456783,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":381,"start":366}}],"name":"tri1","ortholog_annotations":[{"gene_uniquename":"SJAG_01836","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8609","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01836","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC29A10.09c","reference_uniquename":"PMID:21511999"}],"product":"triman, ribonuclease involved in priRNA formation Tri1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0004535"]}},"subset_termids":["GO:0140098","GO:0005634","GO:0016788","GO:0006325","GO:0004527","MONDO:0019303","MONDO:0005093","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000779":null,"GO:0003723":null,"GO:0004535":null,"GO:0005634":null,"GO:0031048":null,"GO:1990431":null,"GO:1990432":null,"MONDO:0014600":null,"MONDO:0014612":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01836.1"],"transcripts_by_uniquename":{"SJAG_01836.1":null},"uniprot_identifier":"B6JZ14","uniquename":"SJAG_01836"}


id: SJAG_01837
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":203,"start":203}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":90,"start":90}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":109,"start":109}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":160,"start":158}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":208,"start":207}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":221,"start":221}}],"cv_annotations":{"biological_process":[{"annotations":[65905],"is_not":false,"summary":null,"term":"GO:0006338"},{"annotations":[117061],"is_not":false,"summary":null,"term":"GO:0120110"},{"annotations":[117062],"is_not":false,"summary":null,"term":"GO:0033316"},{"annotations":[77414],"is_not":false,"summary":null,"term":"GO:0007052"},{"annotations":[117067],"is_not":false,"summary":null,"term":"GO:0010971"},{"annotations":[117068],"is_not":false,"summary":null,"term":"GO:1905561"},{"annotations":[117069],"is_not":false,"summary":null,"term":"GO:0090267"},{"annotations":[117070],"is_not":false,"summary":null,"term":"GO:1903380"},{"annotations":[117071],"is_not":false,"summary":null,"term":"GO:1905824"},{"annotations":[117072],"is_not":false,"summary":null,"term":"GO:0140429"},{"annotations":[77416],"is_not":false,"summary":null,"term":"GO:1902412"},{"annotations":[117075],"is_not":false,"summary":null,"term":"GO:1904967"}],"cellular_component":[{"annotations":[77415],"is_not":false,"summary":null,"term":"GO:0032133"},{"annotations":[117052],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[117053],"is_not":false,"summary":null,"term":"GO:0000939"},{"annotations":[117056],"is_not":false,"summary":null,"term":"GO:1990385"},{"annotations":[117057],"is_not":false,"summary":null,"term":"GO:1990023"},{"annotations":[117058],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[77413],"is_not":false,"summary":null,"term":"GO:0005876"}],"molecular_function":[{"annotations":[65902],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[117078],"is_not":false,"summary":null,"term":"GO:0035175"}],"mondo":[{"annotations":[87691],"is_not":false,"summary":null,"term":"MONDO:0005575"},{"annotations":[85530],"is_not":false,"summary":null,"term":"MONDO:0009461"}]},"dbxrefs":["InterPro:IPR008271","EnsemblGenomes-Tr:EEB06783","UniProtKB/TrEMBL:B6JZ15","EnsemblGenomes-Gn:SJAG_01837","InterPro:IPR017441","InterPro:IPR030616","InterPro:IPR011009","InterPro:IPR000719","GOA:B6JZ15"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":69,"start":35}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"exo1","uniquename":"SJAG_01832"},{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"}],"genes_by_uniquename":{"HGNC:11390":null,"HGNC:11391":null,"HGNC:11393":null,"SJAG_01837":null,"SPCC320.13c":null,"YPL209C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":331,"start":80}],"match_end":331,"match_start":80,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_Aurora","id":"cd14007","locations":[{"end":332,"start":80}],"match_end":332,"match_start":80,"name":"STKc_Aurora"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":211,"start":199}],"match_end":211,"match_start":199,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":109,"start":86}],"match_end":109,"match_start":86,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":331,"start":80}],"match_end":331,"match_start":80,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":331,"start":80}],"match_end":331,"match_start":80,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Serine/threonine-protein kinase ark1","id":"G3DSA:1.10.510.10:FF:000235","locations":[{"end":343,"start":72}],"match_end":343,"match_start":72},{"dbname":"FUNFAM","description":"Aurora kinase A","id":"G3DSA:3.30.200.20:FF:000042","locations":[{"end":163,"start":73}],"match_end":163,"match_start":73},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":338,"start":67}],"match_end":338,"match_start":67,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":342,"start":73}],"match_end":342,"match_start":73,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PANTHER","id":"PTHR24350","interpro_description":"Aurora kinase-like","interpro_id":"IPR030616","interpro_name":"Aur-like","locations":[{"end":333,"start":35}],"match_end":333,"match_start":35,"name":"SERINE/THREONINE-PROTEIN KINASE IAL-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":69,"start":35}],"match_end":69,"match_start":35,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":47,"start":35},{"end":69,"start":59}],"match_end":69,"match_start":35,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":58,"start":49}],"match_end":58,"match_start":49,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2459455,"start_pos":2458415,"strand":"forward"},"name":"ark1","ortholog_annotations":[{"gene_uniquename":"SJAG_01837","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11390","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01837","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11391","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01837","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11393","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01837","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01837","ortholog_taxonid":4932,"ortholog_uniquename":"YPL209C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01837","ortholog_taxonid":4932,"ortholog_uniquename":"YPL209C","reference_uniquename":"PMID:26896847"}],"product":"Aurora-B kinase Ark1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0035175"]}},"subset_termids":["GO:0006325","GO:0000070","GO:0000776","GO:0023052","GO:0005634","GO:0015630","GO:0000226","GO:0044772","MONDO:0004992","MONDO:0004335","GO:0000281","GO:0005694","GO:0140013","GO:0140096","GO:0065003","GO:0072686","GO:0016301","GO:0004672","MONDO:0005047"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000939":null,"GO:0005524":null,"GO:0005876":null,"GO:0006338":null,"GO:0007052":null,"GO:0010971":null,"GO:0032133":null,"GO:0033316":null,"GO:0035175":null,"GO:0090267":null,"GO:0120110":null,"GO:0140429":null,"GO:0140445":null,"GO:0140602":null,"GO:1902412":null,"GO:1903380":null,"GO:1904967":null,"GO:1905561":null,"GO:1905824":null,"GO:1990023":null,"GO:1990385":null,"MONDO:0005575":null,"MONDO:0009461":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01837.1"],"transcripts_by_uniquename":{"SJAG_01837.1":null},"uniprot_identifier":"B6JZ15","uniquename":"SJAG_01837"}


id: SJAG_01838
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78461],"is_not":false,"summary":null,"term":"GO:0034982"},{"annotations":[78460],"is_not":false,"summary":null,"term":"GO:0033615"}],"cellular_component":[{"annotations":[67252],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[67251],"is_not":false,"summary":null,"term":"GO:0004222"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ16","GOA:B6JZ16","EnsemblGenomes-Tr:EEB06784","EnsemblGenomes-Gn:SJAG_01838","InterPro:IPR019165"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ely5","uniquename":"SJAG_01833"},{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"}],"genes_by_uniquename":{"HGNC:29452":null,"SJAG_01838":null,"SPCC320.12":null,"YNR020C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Peptidase M76 family","id":"PF09768","interpro_description":"Peptidase M76, ATP23","interpro_id":"IPR019165","interpro_name":"Peptidase_M76_ATP23","locations":[{"end":172,"start":2}],"match_end":172,"match_start":2,"name":"Peptidase_M76"},{"dbname":"PANTHER","id":"PTHR21711","interpro_description":"Peptidase M76, ATP23","interpro_id":"IPR019165","interpro_name":"Peptidase_M76_ATP23","locations":[{"end":174,"start":2}],"match_end":174,"match_start":2,"name":"MITOCHONDRIAL INNER MEMBRANE PROTEASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":2460326,"start_pos":2459734,"strand":"reverse"},"name":"atp23","ortholog_annotations":[{"gene_uniquename":"SJAG_01838","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29452","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01838","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01838","ortholog_taxonid":4932,"ortholog_uniquename":"YNR020C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01838","ortholog_taxonid":4932,"ortholog_uniquename":"YNR020C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial inner membrane peptidase Atp23","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004222"]}},"subset_termids":["GO:0140096","GO:0005739","GO:0007005","GO:0065003","GO:0008233","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004222":null,"GO:0005743":null,"GO:0033615":null,"GO:0034982":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01838.1"],"transcripts_by_uniquename":{"SJAG_01838.1":null},"uniprot_identifier":"B6JZ16","uniquename":"SJAG_01838"}


id: SJAG_01839
data:
  {"cv_annotations":{"biological_process":[{"annotations":[117044],"is_not":false,"summary":null,"term":"GO:1902626"}],"cellular_component":[{"annotations":[117039],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71666],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[71668],"is_not":false,"summary":null,"term":"GO:0030687"}],"molecular_function":[{"annotations":[58765],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["GOA:B6JZ17","InterPro:IPR040598","InterPro:IPR036974","UniProtKB/TrEMBL:B6JZ17","EnsemblGenomes-Tr:EEB06785","InterPro:IPR015947","InterPro:IPR016686","InterPro:IPR002478","InterPro:IPR005155","EnsemblGenomes-Gn:SJAG_01839"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pom152","uniquename":"SJAG_01834"},{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"}],"genes_by_uniquename":{"HGNC:24328":null,"SJAG_01839":null,"SPCC320.11c":null,"YPL211W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NIP7/UPF0113, pre-PUA domain","id":"PF17833","interpro_description":"60S ribosome subunit biogenesis protein NIP7, pre-PUA domain","interpro_id":"IPR040598","interpro_name":"NIP7_N","locations":[{"end":83,"start":1}],"match_end":83,"match_start":1,"name":"pre-PUA_NIP7"},{"dbname":"PFAM","description":"UPF0113 PUA domain","id":"PF03657","interpro_description":"UPF0113, PUA domain","interpro_id":"IPR005155","interpro_name":"UPF0113_PUA","locations":[{"end":175,"start":96}],"match_end":175,"match_start":96,"name":"UPF0113"},{"dbname":"CDD","description":"Nip7_N_euk","id":"cd21146","interpro_description":"60S ribosome subunit biogenesis protein Nip7, pre-PUA domain, eukaryotes","interpro_id":"IPR055359","interpro_name":"Nip7_N_euk","locations":[{"end":88,"start":2}],"match_end":88,"match_start":2,"name":"Nip7_N_euk"},{"dbname":"CDD","description":"PUA_Nip7-like","id":"cd21151","interpro_description":"UPF0113, PUA domain","interpro_id":"IPR005155","interpro_name":"UPF0113_PUA","locations":[{"end":172,"start":95}],"match_end":172,"match_start":95,"name":"PUA_Nip7-like"},{"dbname":"PROSITE_PROFILES","description":"PUA domain profile.","id":"PS50890","locations":[{"end":170,"start":94}],"match_end":170,"match_start":94,"name":"PUA"},{"dbname":"SMART","id":"SM00359","interpro_description":"PUA domain","interpro_id":"IPR002478","interpro_name":"PUA","locations":[{"end":170,"start":95}],"match_end":170,"match_start":95,"name":"pua_5"},{"dbname":"FUNFAM","description":"60S ribosome subunit biogenesis protein NIP7 homolog","id":"G3DSA:3.10.450.220:FF:000001","locations":[{"end":93,"start":1}],"match_end":93,"match_start":1},{"dbname":"FUNFAM","description":"60S ribosome subunit biogenesis protein NIP7 homolog","id":"G3DSA:2.30.130.10:FF:000002","locations":[{"end":180,"start":94}],"match_end":180,"match_start":94},{"dbname":"SUPERFAMILY","id":"SSF88697","interpro_description":"PUA-like superfamily","interpro_id":"IPR015947","interpro_name":"PUA-like_sf","locations":[{"end":170,"start":95}],"match_end":170,"match_start":95,"name":"PUA domain-like"},{"dbname":"SUPERFAMILY","id":"SSF88802","locations":[{"end":94,"start":1}],"match_end":94,"match_start":1,"name":"Pre-PUA domain"},{"dbname":"GENE3D","id":"G3DSA:2.30.130.10","interpro_description":"PUA domain superfamily","interpro_id":"IPR036974","interpro_name":"PUA_sf","locations":[{"end":180,"start":94}],"match_end":180,"match_start":94,"name":"PUA domain"},{"dbname":"GENE3D","id":"G3DSA:3.10.450.220","locations":[{"end":93,"start":1}],"match_end":93,"match_start":1},{"dbname":"PANTHER","id":"PTHR23415","locations":[{"end":176,"start":1}],"match_end":176,"match_start":1,"name":"CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7"},{"dbname":"PIRSF","id":"PIRSF017190","interpro_description":"Ribosome biogenesis factor, NIP7","interpro_id":"IPR016686","interpro_name":"Ribosomal_synth_fac_NIP7","locations":[{"end":180,"start":1}],"match_end":180,"match_start":1,"name":"NIP7"}],"location":{"chromosome_name":"supercont5.3","end_pos":2461349,"start_pos":2460688,"strand":"forward"},"name":"nip7","ortholog_annotations":[{"gene_uniquename":"SJAG_01839","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24328","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01839","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01839","ortholog_taxonid":4932,"ortholog_uniquename":"YPL211W","reference_uniquename":"PMID:29761456"}],"product":"RNA-binding ribosome biogenesis protein Nip7","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0042254","GO:0005829","GO:0005730","GO:0030684","GO:0005634","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005730":null,"GO:0005829":null,"GO:0030687":null,"GO:1902626":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01839.1"],"transcripts_by_uniquename":{"SJAG_01839.1":null},"uniprot_identifier":"B6JZ17","uniquename":"SJAG_01839"}


id: SJAG_01840
data:
  {"coiled_coil_coords":[{"range":{"end":175,"start":155}}],"cv_annotations":{"biological_process":[{"annotations":[73360],"is_not":false,"summary":null,"term":"GO:0006614"}],"cellular_component":[{"annotations":[117032],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[117033],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[73361],"is_not":false,"summary":null,"term":"GO:0005786"}],"molecular_function":[{"annotations":[73359],"is_not":false,"summary":null,"term":"GO:0008312"},{"annotations":[73358],"is_not":false,"summary":null,"term":"GO:0043022"},{"annotations":[117038],"is_not":false,"summary":null,"term":"GO:0005048"}],"mondo":[{"annotations":[86668],"is_not":false,"summary":null,"term":"MONDO:0013851"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01840","EnsemblGenomes-Tr:EEB06786","InterPro:IPR011990","GOA:B6JZ18","InterPro:IPR013699","InterPro:IPR026270","UniProtKB/TrEMBL:B6JZ18"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":560,"start":511}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gas2","uniquename":"SJAG_01835"},{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"}],"genes_by_uniquename":{"HGNC:11303":null,"SJAG_01840":null,"SPCC320.10":null,"YPL210C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SRP72 RNA-binding domain","id":"PF08492","interpro_description":"Signal recognition particle, SRP72 subunit, RNA-binding","interpro_id":"IPR013699","interpro_name":"Signal_recog_part_SRP72_RNA-bd","locations":[{"end":542,"start":509}],"match_end":542,"match_start":509,"name":"SRP72"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":209,"start":85}],"match_end":209,"match_start":85,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":134,"start":24}],"match_end":134,"match_start":24,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR14094","interpro_description":"Signal recognition particle, SRP72 subunit","interpro_id":"IPR026270","interpro_name":"SRP72","locations":[{"end":559,"start":32}],"match_end":559,"match_start":32,"name":"SIGNAL RECOGNITION PARTICLE 72"},{"dbname":"COILS","id":"Coil","locations":[{"end":175,"start":155}],"match_end":175,"match_start":155,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":560,"start":511}],"match_end":560,"match_start":511,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":539,"start":529}],"match_end":539,"match_start":529,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":551,"start":540}],"match_end":551,"match_start":540,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2463402,"start_pos":2461642,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":522,"start":511}}],"name":"srp72","ortholog_annotations":[{"gene_uniquename":"SJAG_01840","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11303","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01840","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01840","ortholog_taxonid":4932,"ortholog_uniquename":"YPL210C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01840","ortholog_taxonid":4932,"ortholog_uniquename":"YPL210C","reference_uniquename":"PMID:26896847"}],"product":"signal recognition particle subunit Srp72","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043022","GO:0008312","GO:0005048"]}},"subset_termids":["MONDO:0002280","GO:0006605","GO:0005829","MONDO:0005046","GO:0005634","GO:0005048","MONDO:0005570"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005048":null,"GO:0005634":null,"GO:0005786":null,"GO:0005829":null,"GO:0006614":null,"GO:0008312":null,"GO:0043022":null,"MONDO:0013851":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01840.1"],"transcripts_by_uniquename":{"SJAG_01840.1":null},"uniprot_identifier":"B6JZ18","uniquename":"SJAG_01840"}


id: SJAG_01841
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74719],"is_not":false,"summary":null,"term":"GO:0006783"}],"cellular_component":[{"annotations":[117026],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[62465],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[117028],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[117030],"is_not":false,"summary":null,"term":"GO:0051537"},{"annotations":[74720],"is_not":false,"summary":null,"term":"GO:0004325"}],"mondo":[{"annotations":[85517],"is_not":false,"summary":null,"term":"MONDO:0008319"}]},"dbxrefs":["InterPro:IPR019772","UniProtKB/TrEMBL:B6JZ19","InterPro:IPR033644","InterPro:IPR001015","EnsemblGenomes-Gn:SJAG_01841","EnsemblGenomes-Tr:EEB06787","InterPro:IPR033659","GOA:B6JZ19"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tri1","uniquename":"SJAG_01836"},{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"}],"genes_by_uniquename":{"HGNC:3647":null,"SJAG_01841":null,"SPCC320.09":null,"YOR176W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ferrochelatase","id":"PF00762","interpro_description":"Ferrochelatase","interpro_id":"IPR001015","interpro_name":"Ferrochelatase","locations":[{"end":380,"start":62}],"match_end":380,"match_start":62,"name":"Ferrochelatase"},{"dbname":"CDD","description":"Ferrochelatase_N","id":"cd03411","interpro_description":"Ferrochelatase, N-terminal","interpro_id":"IPR033659","interpro_name":"Ferrochelatase_N","locations":[{"end":224,"start":62}],"match_end":224,"match_start":62,"name":"Ferrochelatase_N"},{"dbname":"CDD","description":"Ferrochelatase_C","id":"cd00419","interpro_description":"Ferrochelatase, C-terminal","interpro_id":"IPR033644","interpro_name":"Ferrochelatase_C","locations":[{"end":364,"start":231}],"match_end":364,"match_start":231,"name":"Ferrochelatase_C"},{"dbname":"PROSITE_PATTERNS","description":"Ferrochelatase signature.","id":"PS00534","interpro_description":"Ferrochelatase, active site","interpro_id":"IPR019772","interpro_name":"Ferrochelatase_AS","locations":[{"end":270,"start":252}],"match_end":270,"match_start":252,"name":"FERROCHELATASE"},{"dbname":"SUPERFAMILY","id":"SSF53800","locations":[{"end":409,"start":60}],"match_end":409,"match_start":60,"name":"Chelatase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1400","locations":[{"end":383,"start":62}],"match_end":383,"match_start":62},{"dbname":"PANTHER","id":"PTHR11108","interpro_description":"Ferrochelatase","interpro_id":"IPR001015","interpro_name":"Ferrochelatase","locations":[{"end":388,"start":55}],"match_end":388,"match_start":55,"name":"FERROCHELATASE"},{"dbname":"HAMAP","description":"Coproporphyrin III ferrochelatase [cpfC].","id":"MF_00323","interpro_description":"Ferrochelatase","interpro_id":"IPR001015","interpro_name":"Ferrochelatase","locations":[{"end":381,"start":60}],"match_end":381,"match_start":60,"name":"Ferrochelatase"},{"dbname":"NCBIFAM","description":"ferrochelatase","id":"TIGR00109","interpro_description":"Ferrochelatase","interpro_id":"IPR001015","interpro_name":"Ferrochelatase","locations":[{"end":381,"start":59}],"match_end":381,"match_start":59,"name":"hemH"}],"location":{"chromosome_name":"supercont5.3","end_pos":2465269,"start_pos":2463824,"strand":"reverse"},"name":"hem15","ortholog_annotations":[{"gene_uniquename":"SJAG_01841","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3647","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01841","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01841","ortholog_taxonid":4932,"ortholog_uniquename":"YOR176W","reference_uniquename":"PMID:29761456"}],"product":"ferrochelatase Hem15","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051537"],"not-binding":["GO:0004325"]}},"subset_termids":["MONDO:0004335","GO:0005634","GO:0005829","MONDO:0005093","MONDO:0002515","GO:0033013","MONDO:0019142","GO:0005739","GO:0016829","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004325":null,"GO:0005634":null,"GO:0005743":null,"GO:0005829":null,"GO:0006783":null,"GO:0051537":null,"MONDO:0008319":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01841.1"],"transcripts_by_uniquename":{"SJAG_01841.1":null},"uniprot_identifier":"B6JZ19","uniquename":"SJAG_01841"}


id: SJAG_01842
data:
  {"cv_annotations":{"biological_process":[{"annotations":[58493],"is_not":false,"summary":null,"term":"GO:0055085"}],"cellular_component":[{"annotations":[117022],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[117023],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[58492],"is_not":false,"summary":null,"term":"GO:0022857"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06788","EnsemblGenomes-Gn:SJAG_01842","GOA:B6JZ20","UniProtKB/TrEMBL:B6JZ20","InterPro:IPR009262"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":49,"start":26}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ark1","uniquename":"SJAG_01837"},{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"}],"genes_by_uniquename":{"HGNC:21483":null,"HGNC:23615":null,"SJAG_01842":null,"SPCC320.08":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Solute carrier family 35","id":"PF06027","interpro_description":"Solute carrier family 35 member SLC35F1/F2/F6","interpro_id":"IPR009262","interpro_name":"SLC35_F1/F2/F6","locations":[{"end":368,"start":74}],"match_end":368,"match_start":74,"name":"SLC35F"},{"dbname":"SUPERFAMILY","id":"SSF103481","locations":[{"end":219,"start":139}],"match_end":219,"match_start":139,"name":"Multidrug resistance efflux transporter EmrE"},{"dbname":"PANTHER","id":"PTHR14233","interpro_description":"SLC35F Solute Transporter","interpro_id":"IPR052221","interpro_name":"SLC35F_Transporter","locations":[{"end":383,"start":50}],"match_end":383,"match_start":50,"name":"DUF914-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":49,"start":26}],"match_end":49,"match_start":26,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":38,"start":28}],"match_end":38,"match_start":28,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2467263,"start_pos":2465950,"strand":"reverse"},"name":"qtp1","ortholog_annotations":[{"gene_uniquename":"SJAG_01842","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21483","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01842","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23615","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01842","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.08","reference_uniquename":"PMID:21511999"}],"product":"plasma membrane queuine and queuosine transmembrane importer, Qtp1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0022857"]}},"subset_termids":["GO:0005886","GO:0005794","GO:0055085","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0005886":null,"GO:0022857":null,"GO:0055085":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":99,"start":77}},{"assigned_by":"TMHMM","range":{"end":131,"start":109}},{"assigned_by":"TMHMM","range":{"end":166,"start":144}},{"assigned_by":"TMHMM","range":{"end":192,"start":170}},{"assigned_by":"TMHMM","range":{"end":216,"start":199}},{"assigned_by":"TMHMM","range":{"end":250,"start":231}},{"assigned_by":"TMHMM","range":{"end":281,"start":259}},{"assigned_by":"TMHMM","range":{"end":318,"start":296}},{"assigned_by":"TMHMM","range":{"end":345,"start":323}},{"assigned_by":"TMHMM","range":{"end":371,"start":349}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01842.1"],"transcripts_by_uniquename":{"SJAG_01842.1":null},"uniprot_identifier":"B6JZ20","uniquename":"SJAG_01842"}


id: SJAG_01843
data:
  {"cv_annotations":{"biological_process":[{"annotations":[117019],"is_not":false,"summary":null,"term":"GO:0006397"},{"annotations":[117020],"is_not":false,"summary":null,"term":"GO:0061013"}],"cellular_component":[{"annotations":[117018],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[75360],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["InterPro:IPR035979","UniProtKB/TrEMBL:B6JZ21","GOA:B6JZ21","EnsemblGenomes-Gn:SJAG_01843","EnsemblGenomes-Tr:EEB06789","InterPro:IPR000504","InterPro:IPR012677"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":20,"start":1}},{"range":{"end":220,"start":192}},{"range":{"end":303,"start":281}},{"range":{"end":394,"start":350}},{"range":{"end":597,"start":555}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atp23","uniquename":"SJAG_01838"},{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"}],"genes_by_uniquename":{"HGNC:19097":null,"HGNC:19098":null,"SJAG_01843":null,"SPCC320.07c":null,"YDL224C":null,"YNL197C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":507,"start":445}],"match_end":507,"match_start":445,"name":"RRM_1"},{"dbname":"CDD","description":"RRM_scw1_like","id":"cd12245","locations":[{"end":519,"start":441}],"match_end":519,"match_start":441,"name":"RRM_scw1_like"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":520,"start":443}],"match_end":520,"match_start":443,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":516,"start":444}],"match_end":516,"match_start":444,"name":"rrm1_1"},{"dbname":"FUNFAM","description":"RNA binding protein","id":"G3DSA:3.30.70.330:FF:000089","locations":[{"end":526,"start":434}],"match_end":526,"match_start":434},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":527,"start":437}],"match_end":527,"match_start":437,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":188,"start":120},{"end":527,"start":434}],"match_end":527,"match_start":120},{"dbname":"PANTHER","id":"PTHR10501","locations":[{"end":173,"start":123}],"match_end":173,"match_start":123,"name":"U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":20,"start":1},{"end":220,"start":192},{"end":303,"start":281},{"end":394,"start":350},{"end":597,"start":555}],"match_end":597,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":365,"start":350},{"end":576,"start":555}],"match_end":576,"match_start":350,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":394,"start":366}],"match_end":394,"match_start":366,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":597,"start":578}],"match_end":597,"match_start":578,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2470790,"start_pos":2468997,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":59,"start":44}},{"range":{"end":174,"start":164}},{"range":{"end":274,"start":264}},{"range":{"end":364,"start":345}},{"range":{"end":575,"start":552}}],"name":"mde7","ortholog_annotations":[{"gene_uniquename":"SJAG_01843","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19097","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01843","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19098","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01843","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01843","ortholog_taxonid":4932,"ortholog_uniquename":"YDL224C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01843","ortholog_taxonid":4932,"ortholog_uniquename":"YDL224C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01843","ortholog_taxonid":4932,"ortholog_uniquename":"YNL197C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01843","ortholog_taxonid":4932,"ortholog_uniquename":"YNL197C","reference_uniquename":"PMID:26896847"}],"product":"RNA-binding protein Mde7","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005737":null,"GO:0006397":null,"GO:0061013":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01843.1"],"transcripts_by_uniquename":{"SJAG_01843.1":null},"uniprot_identifier":"B6JZ21","uniquename":"SJAG_01843"}


id: SJAG_01844
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[117016],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[117017],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01844","UniProtKB/TrEMBL:B6JZ22","EnsemblGenomes-Tr:EEB06790"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":312,"start":292}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nip7","uniquename":"SJAG_01839"},{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"}],"genes_by_uniquename":{"HGNC:28270":null,"SJAG_01844":null,"SPCC320.06":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":312,"start":292}],"match_end":312,"match_start":292,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2471905,"start_pos":2470967,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":298,"start":290}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01844","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28270","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01844","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC320.06","reference_uniquename":"PMID:21511999"}],"product":"conserved eukaryotic protein, R3H domain-containing","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01844.1"],"transcripts_by_uniquename":{"SJAG_01844.1":null},"uniprot_identifier":"B6JZ22","uniquename":"SJAG_01844"}


id: SJAG_01845
data:
  {"cv_annotations":{"molecular_function":[{"annotations":[61431],"is_not":false,"summary":null,"term":"GO:0004356"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06791","UniProtKB/TrEMBL:B6JZ23","GOA:B6JZ23","InterPro:IPR008146","InterPro:IPR014746","EnsemblGenomes-Gn:SJAG_01845"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srp72","uniquename":"SJAG_01840"},{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"}],"genes_by_uniquename":{"SJAG_01845":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glutamine synthetase, catalytic domain","id":"PF00120","interpro_description":"Glutamine synthetase, catalytic domain","interpro_id":"IPR008146","interpro_name":"Gln_synth_cat_dom","locations":[{"end":465,"start":117}],"match_end":465,"match_start":117,"name":"Gln-synt_C"},{"dbname":"PROSITE_PROFILES","description":"Glutamine synthetase (GS) catalytic domain profile.","id":"PS51987","interpro_description":"Glutamine synthetase, catalytic domain","interpro_id":"IPR008146","interpro_name":"Gln_synth_cat_dom","locations":[{"end":471,"start":119}],"match_end":471,"match_start":119,"name":"GS_CATALYTIC"},{"dbname":"SMART","id":"SM01230","interpro_description":"Glutamine synthetase, catalytic domain","interpro_id":"IPR008146","interpro_name":"Gln_synth_cat_dom","locations":[{"end":378,"start":116}],"match_end":378,"match_start":116,"name":"Gln_synt_C_2"},{"dbname":"SUPERFAMILY","id":"SSF55931","interpro_description":"Glutamine synthetase/guanido kinase, catalytic domain","interpro_id":"IPR014746","interpro_name":"Gln_synth/guanido_kin_cat_dom","locations":[{"end":467,"start":118}],"match_end":467,"match_start":118,"name":"Glutamine synthetase/guanido kinase"},{"dbname":"GENE3D","id":"G3DSA:3.30.590.10","locations":[{"end":468,"start":119}],"match_end":468,"match_start":119,"name":"Glutamine synthetase/guanido kinase, catalytic domain"},{"dbname":"PANTHER","id":"PTHR43785","locations":[{"end":467,"start":106}],"match_end":467,"match_start":106,"name":"GAMMA-GLUTAMYLPUTRESCINE SYNTHETASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":2473830,"start_pos":2472415,"strand":"reverse"},"product":"glutamine synthetase family","references_by_uniquename":{"GO_REF:0000002":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004356"]}},"subset_termids":["GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004356":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01845.1"],"transcripts_by_uniquename":{"SJAG_01845.1":null},"uniprot_identifier":"B6JZ23","uniquename":"SJAG_01845"}


id: SJAG_01846
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":388,"start":21}}],"cv_annotations":{"sequence":[{"annotations":[80857],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR018620","UniProtKB/TrEMBL:B6JZ24","EnsemblGenomes-Gn:SJAG_01846","EnsemblGenomes-Tr:EEB06792"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hem15","uniquename":"SJAG_01841"},{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"}],"genes_by_uniquename":{"SJAG_01846":null,"SPBC3D6.02":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin 3 binding protein But2 C-terminal domain","id":"PF09792","interpro_description":"Ubiquitin 3 binding protein But2, C-terminal","interpro_id":"IPR018620","interpro_name":"Ubiquitin3-bd_protein_But2_C","locations":[{"end":373,"start":226}],"match_end":373,"match_start":226,"name":"But2"},{"dbname":"PANTHER","id":"PTHR39613","locations":[{"end":381,"start":219}],"match_end":381,"match_start":219,"name":"ANCHORED CELL WALL PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G08960)-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2478053,"start_pos":2476887,"strand":"reverse"},"name":"but2","ortholog_annotations":[{"gene_uniquename":"SJAG_01846","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3D6.02","reference_uniquename":"PMID:21511999"}],"product":"But2 family protein But2, similar to cell surface molecules","references_by_uniquename":{"PMID:21511999":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":20,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01846.1"],"transcripts_by_uniquename":{"SJAG_01846.1":null},"uniprot_identifier":"B6JZ24","uniquename":"SJAG_01846"}


id: SJAG_01848
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109022],"is_not":false,"summary":null,"term":"GO:1990809"},{"annotations":[119878],"is_not":false,"summary":null,"term":"GO:0097753"}],"cellular_component":[{"annotations":[109018],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[119873],"is_not":false,"summary":null,"term":"GO:0032541"},{"annotations":[109021],"is_not":false,"summary":null,"term":"GO:0098826"}],"molecular_function":[{"annotations":[109024],"is_not":false,"summary":null,"term":"GO:0180020"},{"annotations":[109025],"is_not":false,"summary":null,"term":"GO:0046625"}],"mondo":[{"annotations":[86067],"is_not":false,"summary":null,"term":"MONDO:0011489"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06793","GOA:B6JZ25","EnsemblGenomes-Gn:SJAG_01848","InterPro:IPR003388","UniProtKB/TrEMBL:B6JZ25"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":32,"start":1}},{"range":{"end":106,"start":51}}],"feature_publications":[{"reference_uniquename":"PMID:33495454","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"qtp1","uniquename":"SJAG_01842"},{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"}],"genes_by_uniquename":{"HGNC:10467":null,"HGNC:10468":null,"HGNC:10469":null,"HGNC:14085":null,"SJAG_01848":null,"SPBC31A8.01c":null,"YDL204W":null,"YDR233C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Reticulon","id":"PF02453","interpro_description":"Reticulon","interpro_id":"IPR003388","interpro_name":"Reticulon","locations":[{"end":387,"start":227}],"match_end":387,"match_start":227,"name":"Reticulon"},{"dbname":"PROSITE_PROFILES","description":"Reticulon domain profile.","id":"PS50845","interpro_description":"Reticulon","interpro_id":"IPR003388","interpro_name":"Reticulon","locations":[{"end":425,"start":227}],"match_end":425,"match_start":227,"name":"RETICULON"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":32,"start":1},{"end":106,"start":51}],"match_end":106,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":12,"start":1}],"match_end":12,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":106,"start":96}],"match_end":106,"match_start":96,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2481595,"start_pos":2480318,"strand":"forward"},"name":"rtn1","ortholog_annotations":[{"gene_uniquename":"SJAG_01848","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10467","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10468","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10469","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14085","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC31A8.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":4932,"ortholog_uniquename":"YDL204W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":4932,"ortholog_uniquename":"YDL204W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":4932,"ortholog_uniquename":"YDR233C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01848","ortholog_taxonid":4932,"ortholog_uniquename":"YDR233C","reference_uniquename":"PMID:26896847"}],"product":"reticulon Rtn1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:33495454":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0046625"],"not-binding":["GO:0180020"]}},"subset_termids":["GO:0008289","GO:0005938","GO:0005789","GO:0005783","MONDO:0005559","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0032153":null,"GO:0032541":null,"GO:0046625":null,"GO:0097753":null,"GO:0098826":null,"GO:0180020":null,"GO:1990809":null,"MONDO:0011489":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":374,"start":352}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01848.1"],"transcripts_by_uniquename":{"SJAG_01848.1":null},"uniprot_identifier":"B6JZ25","uniquename":"SJAG_01848"}


id: SJAG_01849
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[111890],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[111891],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[111892],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[111893],"is_not":false,"summary":null,"term":"GO:0035861"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01849","EnsemblGenomes-Tr:EEB06794","UniProtKB/TrEMBL:B6JZ26"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":32,"start":1}},{"range":{"end":67,"start":48}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mde7","uniquename":"SJAG_01843"},{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"}],"genes_by_uniquename":{"SJAG_01849":null,"SPBC651.12c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":32,"start":1},{"end":67,"start":48}],"match_end":67,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":21,"start":12}],"match_end":21,"match_start":12,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2482665,"start_pos":2481904,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":29,"start":9}},{"range":{"end":232,"start":219}}],"name":"dbl7","ortholog_annotations":[{"gene_uniquename":"SJAG_01849","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC651.12c"}],"product":"Schizosaccharomyces specific protein, double strand break localizing Dbl7","references_by_uniquename":{"GO_REF:0000107":null},"split_by_parent_groups":{},"subset_termids":["GO:0015630","GO:0072686","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0035861":null,"GO:0072686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01849.1"],"transcripts_by_uniquename":{"SJAG_01849.1":null},"uniprot_identifier":"B6JZ26","uniquename":"SJAG_01849"}


id: SJAG_01850
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[98671],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[77729],"is_not":false,"summary":null,"term":"GO:0016491"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01850","InterPro:IPR020904","EnsemblGenomes-Tr:EEB06795","InterPro:IPR036291","GOA:B6JZ27","InterPro:IPR002347","UniProtKB/TrEMBL:B6JZ27"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01844"},{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"}],"genes_by_uniquename":{"HGNC:21524":null,"HGNC:24547":null,"HGNC:32423":null,"SJAG_01850":null,"SPAC521.03":null,"YMR226C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"short chain dehydrogenase","id":"PF00106","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":202,"start":7}],"match_end":202,"match_start":7,"name":"adh_short"},{"dbname":"PROSITE_PATTERNS","description":"Short-chain dehydrogenases/reductases family signature.","id":"PS00061","interpro_description":"Short-chain dehydrogenase/reductase, conserved site","interpro_id":"IPR020904","interpro_name":"Sc_DH/Rdtase_CS","locations":[{"end":175,"start":147}],"match_end":175,"match_start":147,"name":"ADH_SHORT"},{"dbname":"PRINTS","description":"Glucose/ribitol dehydrogenase family signature","id":"PR00081","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":25,"start":8},{"end":96,"start":85},{"end":150,"start":134},{"end":179,"start":160},{"end":198,"start":181}],"match_end":198,"match_start":8,"name":"GDHRDH"},{"dbname":"PRINTS","description":"Short-chain dehydrogenase/reductase (SDR) superfamily signature","id":"PR00080","interpro_description":"Short-chain dehydrogenase/reductase SDR","interpro_id":"IPR002347","interpro_name":"SDR_fam","locations":[{"end":96,"start":85},{"end":148,"start":140},{"end":179,"start":160}],"match_end":179,"match_start":85,"name":"SDRFAMILY"},{"dbname":"FUNFAM","description":"NADP-dependent L-serine/L-allo-threonine dehydrogenase","id":"G3DSA:3.40.50.720:FF:000047","locations":[{"end":250,"start":1}],"match_end":250,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":242,"start":1}],"match_end":242,"match_start":1,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":259,"start":1}],"match_end":259,"match_start":1},{"dbname":"PANTHER","id":"PTHR42901","locations":[{"end":259,"start":3}],"match_end":259,"match_start":3,"name":"ALCOHOL DEHYDROGENASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":2484176,"start_pos":2483391,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":51,"start":30}},{"range":{"end":100,"start":91}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01850","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21524","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01850","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24547","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01850","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32423","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01850","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC521.03","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01850","ortholog_taxonid":4932,"ortholog_uniquename":"YMR226C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01850","ortholog_taxonid":4932,"ortholog_uniquename":"YMR226C","reference_uniquename":"PMID:26896847"}],"product":"short chain dehydrogenase,  human DHRS7 family","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016491"]}},"subset_termids":["GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0016491":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01850.1"],"transcripts_by_uniquename":{"SJAG_01850.1":null},"uniprot_identifier":"B6JZ27","uniquename":"SJAG_01850"}


id: SJAG_01851
data:
  {"cv_annotations":{"biological_process":[{"annotations":[118868],"is_not":false,"summary":null,"term":"GO:0002182"}],"cellular_component":[{"annotations":[118862],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[118865],"is_not":false,"summary":null,"term":"GO:0005853"}],"molecular_function":[{"annotations":[69388],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[80148],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[80147],"is_not":false,"summary":null,"term":"GO:0003746"}],"mondo":[{"annotations":[85595],"is_not":false,"summary":null,"term":"MONDO:0014625"},{"annotations":[85660],"is_not":false,"summary":null,"term":"MONDO:0014617"}]},"dbxrefs":["InterPro:IPR031157","UniProtKB/TrEMBL:B6JZ28","InterPro:IPR004539","InterPro:IPR027417","InterPro:IPR009001","InterPro:IPR004161","GOA:B6JZ28","InterPro:IPR004160","InterPro:IPR000795","EnsemblGenomes-Gn:SJAG_01851","EnsemblGenomes-Tr:EEB06796","InterPro:IPR009000"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01845"},{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"}],"genes_by_uniquename":{"HGNC:3189":null,"HGNC:3192":null,"SJAG_01851":null,"SPAC23A1.10":null,"SPBC839.15c":null,"SPCC794.09c":null,"YBR118W":null,"YPR080W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GTP-eEF1A C-terminal domain-like","id":"PF22594","interpro_description":"GTP-eEF1A, C-terminal domain","interpro_id":"IPR054696","interpro_name":"GTP-eEF1A_C","locations":[{"end":431,"start":338}],"match_end":431,"match_start":338,"name":"GTP-eEF1A_C"},{"dbname":"PFAM","description":"Elongation factor Tu GTP binding domain","id":"PF00009","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":234,"start":6}],"match_end":234,"match_start":6,"name":"GTP_EFTU"},{"dbname":"PFAM","description":"Elongation factor Tu domain 2","id":"PF03144","interpro_description":"Translation elongation factor EFTu-like, domain 2","interpro_id":"IPR004161","interpro_name":"EFTu-like_2","locations":[{"end":323,"start":258}],"match_end":323,"match_start":258,"name":"GTP_EFTU_D2"},{"dbname":"CDD","description":"EF1_alpha","id":"cd01883","locations":[{"end":236,"start":9}],"match_end":236,"match_start":9,"name":"EF1_alpha"},{"dbname":"CDD","description":"EF1_alpha_III","id":"cd03705","locations":[{"end":430,"start":338}],"match_end":430,"match_start":338,"name":"EF1_alpha_III"},{"dbname":"CDD","description":"EF1_alpha_II","id":"cd03693","locations":[{"end":325,"start":240}],"match_end":325,"match_start":240,"name":"EF1_alpha_II"},{"dbname":"PROSITE_PATTERNS","description":"Translational (tr)-type guanine nucleotide-binding (G) domain signature.","id":"PS00301","interpro_description":"Tr-type G domain, conserved site","interpro_id":"IPR031157","interpro_name":"G_TR_CS","locations":[{"end":76,"start":61}],"match_end":76,"match_start":61,"name":"G_TR_1"},{"dbname":"PROSITE_PROFILES","description":"Translational (tr)-type guanine nucleotide-binding (G) domain profile.","id":"PS51722","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":240,"start":5}],"match_end":240,"match_start":5,"name":"G_TR_2"},{"dbname":"PRINTS","description":"GTP-binding elongation factor signature","id":"PR00315","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":22,"start":9},{"end":76,"start":68},{"end":98,"start":88},{"end":115,"start":104},{"end":157,"start":148}],"match_end":157,"match_start":9,"name":"ELONGATNFCT"},{"dbname":"FUNFAM","description":"Elongation factor 1-alpha","id":"G3DSA:2.40.30.10:FF:000003","locations":[{"end":325,"start":239}],"match_end":325,"match_start":239},{"dbname":"FUNFAM","description":"Elongation factor 1-alpha","id":"G3DSA:2.40.30.10:FF:000005","locations":[{"end":434,"start":333}],"match_end":434,"match_start":333},{"dbname":"FUNFAM","description":"Elongation factor 1-alpha","id":"G3DSA:3.40.50.300:FF:000211","locations":[{"end":236,"start":1}],"match_end":236,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":323,"start":241}],"match_end":323,"match_start":241,"name":"Translation proteins"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":259,"start":3}],"match_end":259,"match_start":3,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF50465","interpro_description":"Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal","interpro_id":"IPR009001","interpro_name":"Transl_elong_EF1A/Init_IF2_C","locations":[{"end":433,"start":337}],"match_end":433,"match_start":337,"name":"EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":236,"start":1}],"match_end":236,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:2.40.30.10","locations":[{"end":324,"start":239},{"end":434,"start":333}],"match_end":434,"match_start":239,"name":"Translation factors"},{"dbname":"PANTHER","id":"PTHR23115","interpro_description":"Translation factor GTPase superfamily members","interpro_id":"IPR050100","interpro_name":"TRAFAC_GTPase_members","locations":[{"end":435,"start":1}],"match_end":435,"match_start":1,"name":"TRANSLATION FACTOR"},{"dbname":"NCBIFAM","description":"translation elongation factor EF-1 subunit alpha","id":"TIGR00483","interpro_description":"Translation elongation factor EF1A, eukaryotic/archaeal","interpro_id":"IPR004539","interpro_name":"Transl_elong_EF1A_euk/arc","locations":[{"end":435,"start":1}],"match_end":435,"match_start":1,"name":"EF-1_alpha"},{"dbname":"NCBIFAM","description":"elongation factor 1-alpha","id":"NF008969","locations":[{"end":435,"start":2}],"match_end":435,"match_start":2,"name":"PRK12317.1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2487034,"start_pos":2485673,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":452,"start":439}}],"name":"tef102","ortholog_annotations":[{"gene_uniquename":"SJAG_01851","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3189","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3189","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3189","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3192","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3192","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3192","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC839.15c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC794.09c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4932,"ortholog_uniquename":"YBR118W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4932,"ortholog_uniquename":"YBR118W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4932,"ortholog_uniquename":"YBR118W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4932,"ortholog_uniquename":"YPR080W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4932,"ortholog_uniquename":"YPR080W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01851","ortholog_taxonid":4932,"ortholog_uniquename":"YPR080W","reference_uniquename":"PMID:29761456"}],"product":"translation elongation factor EF-1 alpha Ef1a","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0003924","GO:0003746"]}},"subset_termids":["GO:0002181","MONDO:0700092","MONDO:0005027","MONDO:0004736","MONDO:0005066","GO:0005829","MONDO:0000426","GO:0003924"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002182":null,"GO:0003746":null,"GO:0003924":null,"GO:0005525":null,"GO:0005829":null,"GO:0005853":null,"MONDO:0014617":null,"MONDO:0014625":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01851.1"],"transcripts_by_uniquename":{"SJAG_01851.1":null},"uniprot_identifier":"B6JZ28","uniquename":"SJAG_01851"}


id: SJAG_01852
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93949],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[93946],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77409],"is_not":false,"summary":null,"term":"GO:0035145"}],"molecular_function":[{"annotations":[77407],"is_not":false,"summary":null,"term":"GO:0003729"}],"mondo":[{"annotations":[87445],"is_not":false,"summary":null,"term":"MONDO:0010121"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06797","EnsemblGenomes-Gn:SJAG_01852","InterPro:IPR012677","InterPro:IPR035979","UniProtKB/TrEMBL:B6JZ29","InterPro:IPR000504","GOA:B6JZ29","InterPro:IPR033744"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":123,"start":97}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"but2","uniquename":"SJAG_01846"},{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"}],"genes_by_uniquename":{"HGNC:9905":null,"SJAG_01852":null,"SPAC23A1.09":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":85,"start":18}],"match_end":85,"match_start":18,"name":"RRM_1"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":108,"start":16}],"match_end":108,"match_start":16,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":89,"start":17}],"match_end":89,"match_start":17,"name":"rrm1_1"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":98,"start":5}],"match_end":98,"match_start":5,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":101,"start":2}],"match_end":101,"match_start":2},{"dbname":"PANTHER","id":"PTHR45894","interpro_description":"RNA-binding motif protein 8","interpro_id":"IPR008111","interpro_name":"RNA-bd_8","locations":[{"end":111,"start":6}],"match_end":111,"match_start":6,"name":"RNA-BINDING PROTEIN 8A"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":123,"start":97}],"match_end":123,"match_start":97,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2487982,"start_pos":2487611,"strand":"reverse"},"name":"rbm8","ortholog_annotations":[{"gene_uniquename":"SJAG_01852","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9905","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01852","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.09","reference_uniquename":"PMID:21511999"}],"product":"exon junction complex subunit, RNA-binding protein Rbm8","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["MONDO:0005570","GO:0016071","MONDO:0005497","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005829":null,"GO:0035145":null,"GO:0045292":null,"MONDO:0010121":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01852.1"],"transcripts_by_uniquename":{"SJAG_01852.1":null},"uniprot_identifier":"B6JZ29","uniquename":"SJAG_01852"}


id: SJAG_01853
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114916],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[114918],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[114910],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[114912],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[114914],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[63575],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ30","EnsemblGenomes-Tr:EEB06798","GOA:B6JZ30","InterPro:IPR008195","EnsemblGenomes-Gn:SJAG_01853","InterPro:IPR018065","InterPro:IPR038562"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rtn1","uniquename":"SJAG_01848"},{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"}],"genes_by_uniquename":{"HGNC:10340":null,"SJAG_01853":null,"SPAC23A1.08c":null,"SPCC1322.15":null,"YER056C-A":null,"YIL052C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L34e","id":"PF01199","interpro_description":"Large ribosomal subunit protein eL34","interpro_id":"IPR008195","interpro_name":"Ribosomal_eL34","locations":[{"end":94,"start":1}],"match_end":94,"match_start":1,"name":"Ribosomal_L34e"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L34e signature.","id":"PS01145","interpro_description":"Large ribosomal subunit protein eL34, conserved site","interpro_id":"IPR018065","interpro_name":"Ribosomal_eL34_CS","locations":[{"end":28,"start":15}],"match_end":28,"match_start":15,"name":"RIBOSOMAL_L34E"},{"dbname":"PRINTS","description":"Ribosomal protein L34 signature","id":"PR01250","interpro_description":"Large ribosomal subunit protein eL34","interpro_id":"IPR008195","interpro_name":"Ribosomal_eL34","locations":[{"end":54,"start":13},{"end":86,"start":64}],"match_end":86,"match_start":13,"name":"RIBOSOMALL34"},{"dbname":"GENE3D","id":"G3DSA:6.20.340.10","interpro_description":"Large ribosomal subunit protein eL34, C-terminal domain superfamily","interpro_id":"IPR038562","interpro_name":"Ribosomal_eL34_C_sf","locations":[{"end":111,"start":40}],"match_end":111,"match_start":40},{"dbname":"GENE3D","id":"G3DSA:6.20.370.70","locations":[{"end":38,"start":1}],"match_end":38,"match_start":1},{"dbname":"PANTHER","id":"PTHR46595","interpro_description":"Large ribosomal subunit protein eL34","interpro_id":"IPR008195","interpro_name":"Ribosomal_eL34","locations":[{"end":111,"start":1}],"match_end":111,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L34"}],"location":{"chromosome_name":"supercont5.3","end_pos":2488692,"start_pos":2488357,"strand":"forward"},"name":"rpl34a","ortholog_annotations":[{"gene_uniquename":"SJAG_01853","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10340","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10340","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1322.15","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4932,"ortholog_uniquename":"YER056C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4932,"ortholog_uniquename":"YER056C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4932,"ortholog_uniquename":"YER056C-A","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4932,"ortholog_uniquename":"YIL052C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4932,"ortholog_uniquename":"YIL052C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01853","ortholog_taxonid":4932,"ortholog_uniquename":"YIL052C","reference_uniquename":"PMID:26896847"}],"product":"60S ribosomal protein L34","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0042254","GO:0002181","GO:0005634","GO:0005730","GO:0030684","GO:0022626","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0022625":null,"GO:0030684":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01853.1"],"transcripts_by_uniquename":{"SJAG_01853.1":null},"uniprot_identifier":"B6JZ30","uniquename":"SJAG_01853"}


id: SJAG_01854
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93931],"is_not":false,"summary":null,"term":"GO:0036503"}],"cellular_component":[{"annotations":[93930],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[93932],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[63632],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[86553],"is_not":false,"summary":null,"term":"MONDO:0012166"},{"annotations":[86447],"is_not":false,"summary":null,"term":"MONDO:0030512"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01854","InterPro:IPR017907","InterPro:IPR018957","InterPro:IPR001841","InterPro:IPR013083","GOA:B6JZ31","EnsemblGenomes-Tr:EEB06799","UniProtKB/TrEMBL:B6JZ31"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dbl7","uniquename":"SJAG_01849"},{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"}],"genes_by_uniquename":{"HGNC:25358":null,"SJAG_01854":null,"SPAC23A1.07":null,"YOL054W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc finger, C3HC4 type (RING finger)","id":"PF00097","interpro_description":"Zinc finger, C3HC4 RING-type","interpro_id":"IPR018957","interpro_name":"Znf_C3HC4_RING-type","locations":[{"end":226,"start":182}],"match_end":226,"match_start":182,"name":"zf-C3HC4"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger RING-type signature.","id":"PS00518","interpro_description":"Zinc finger, RING-type, conserved site","interpro_id":"IPR017907","interpro_name":"Znf_RING_CS","locations":[{"end":211,"start":202}],"match_end":211,"match_start":202,"name":"ZF_RING_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":226,"start":181}],"match_end":226,"match_start":181,"name":"ZF_RING_2"},{"dbname":"SMART","id":"SM00184","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":226,"start":181}],"match_end":226,"match_start":181,"name":"ring_2"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":232,"start":180}],"match_end":232,"match_start":180,"name":"RING/U-box"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":237,"start":160}],"match_end":237,"match_start":160,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"}],"location":{"chromosome_name":"supercont5.3","end_pos":2489720,"start_pos":2489001,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":47,"start":33}}],"name":"rnf170","ortholog_annotations":[{"gene_uniquename":"SJAG_01854","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25358","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01854","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01854","ortholog_taxonid":4932,"ortholog_uniquename":"YOL054W","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin-protein ligase E3 Rnf170","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0061630"]}},"subset_termids":["GO:0140096","GO:0016746","GO:0019787","MONDO:0005559","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0008270":null,"GO:0036503":null,"GO:0061630":null,"MONDO:0012166":null,"MONDO:0030512":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01854.1"],"transcripts_by_uniquename":{"SJAG_01854.1":null},"uniprot_identifier":"B6JZ31","uniquename":"SJAG_01854"}


id: SJAG_01855
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":97,"start":97}}],"cv_annotations":{"biological_process":[{"annotations":[93924],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[93925],"is_not":false,"summary":null,"term":"GO:0044773"},{"annotations":[93926],"is_not":false,"summary":null,"term":"GO:0010972"}],"cellular_component":[{"annotations":[93917],"is_not":false,"summary":null,"term":"GO:0072324"},{"annotations":[93919],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[93921],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[93922],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[93923],"is_not":false,"summary":null,"term":"GO:0005628"}],"molecular_function":[{"annotations":[69450],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[93928],"is_not":false,"summary":null,"term":"GO:0004683"}]},"dbxrefs":["InterPro:IPR000719","InterPro:IPR008271","InterPro:IPR011009","UniProtKB/TrEMBL:B6JZ32","InterPro:IPR017441","EnsemblGenomes-Gn:SJAG_01855","EnsemblGenomes-Tr:EEB06800","GOA:B6JZ32"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":34,"start":13}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01850"},{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"}],"genes_by_uniquename":{"SJAG_01855":null,"SPAC23A1.06c":null,"YGL158W":null,"YLR248W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":350,"start":64}],"match_end":350,"match_start":64,"name":"Pkinase"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":97,"start":70}],"match_end":97,"match_start":70,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":195,"start":183}],"match_end":195,"match_start":183,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":350,"start":64}],"match_end":350,"match_start":64,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":350,"start":64}],"match_end":350,"match_start":64,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Aurora kinase A","id":"G3DSA:3.30.200.20:FF:000042","locations":[{"end":146,"start":59}],"match_end":146,"match_start":59},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":199,"start":59},{"end":397,"start":230}],"match_end":397,"match_start":59,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":196,"start":143},{"end":381,"start":229}],"match_end":381,"match_start":143,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":142,"start":54}],"match_end":142,"match_start":54,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"PANTHER","id":"PTHR24347","locations":[{"end":371,"start":64}],"match_end":371,"match_start":64,"name":"SERINE/THREONINE-PROTEIN KINASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":34,"start":13}],"match_end":34,"match_start":13,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":34,"start":25}],"match_end":34,"match_start":25,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2492010,"start_pos":2490223,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":233,"start":223}},{"range":{"end":413,"start":400}},{"range":{"end":508,"start":503}}],"name":"cmk2","ortholog_annotations":[{"gene_uniquename":"SJAG_01855","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01855","ortholog_taxonid":4932,"ortholog_uniquename":"YGL158W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01855","ortholog_taxonid":4932,"ortholog_uniquename":"YLR248W","reference_uniquename":"PMID:29761456"}],"product":"MAPK-activated protein kinase Cmk2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004683"]}},"subset_termids":["GO:0023052","GO:0005938","GO:0000935","GO:0005628","GO:0004672","GO:0044772","GO:0016301","GO:0005634","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000935":null,"GO:0004683":null,"GO:0005524":null,"GO:0005628":null,"GO:0005634":null,"GO:0010972":null,"GO:0034599":null,"GO:0044773":null,"GO:0051285":null,"GO:0072324":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01855.1"],"transcripts_by_uniquename":{"SJAG_01855.1":null},"uniprot_identifier":"B6JZ32","uniquename":"SJAG_01855"}


id: SJAG_01857
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93915],"is_not":false,"summary":null,"term":"GO:0030148"}],"cellular_component":[{"annotations":[93913],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[93914],"is_not":false,"summary":null,"term":"GO:0017059"}],"molecular_function":[{"annotations":[93916],"is_not":false,"summary":null,"term":"GO:0008047"}],"mondo":[{"annotations":[86696],"is_not":false,"summary":null,"term":"MONDO:0957308"},{"annotations":[86697],"is_not":false,"summary":null,"term":"MONDO:0957309"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ33","InterPro:IPR024512","GOA:B6JZ33","EnsemblGenomes-Tr:EEB06801","EnsemblGenomes-Gn:SJAG_01857"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tef102","uniquename":"SJAG_01851"},{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"}],"genes_by_uniquename":{"HGNC:20361":null,"SJAG_01857":null,"SPAC23A1.05":null,"YBR058C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Small subunit of serine palmitoyltransferase-like","id":"PF11779","interpro_description":"Small subunit of serine palmitoyltransferase-like","interpro_id":"IPR024512","interpro_name":"Ser_palmitoyltrfase_ssu-like","locations":[{"end":71,"start":19}],"match_end":71,"match_start":19,"name":"SPT_ssu-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":2493895,"start_pos":2493608,"strand":"reverse"},"name":"tsc3","ortholog_annotations":[{"gene_uniquename":"SJAG_01857","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20361","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01857","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01857","ortholog_taxonid":4932,"ortholog_uniquename":"YBR058C-A","reference_uniquename":"PMID:29761456"}],"product":"SPOTS complex subunit, serine palmitoyltransferase activator Tsc3","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008047"]}},"subset_termids":["GO:0098772","GO:0006629","MONDO:0005559","GO:0005789","GO:0005783","GO:0030234"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0008047":null,"GO:0017059":null,"GO:0030148":null,"MONDO:0957308":null,"MONDO:0957309":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":59,"start":37}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01857.1"],"transcripts_by_uniquename":{"SJAG_01857.1":null},"uniprot_identifier":"B6JZ33","uniquename":"SJAG_01857"}


id: SJAG_01858
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":131,"start":131}},{"assigned_by":"UniProtKB","range":{"end":271,"start":271}},{"assigned_by":"UniProtKB","range":{"end":366,"start":366}},{"assigned_by":"UniProtKB","range":{"end":385,"start":385}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Ca(2+)","range":{"end":470,"start":470}}],"chains":[{"assigned_by":"UniProtKB","range":{"end":812,"start":24}}],"cv_annotations":{"biological_process":[{"annotations":[67153],"is_not":false,"summary":null,"term":"GO:1904380"},{"annotations":[93908],"is_not":false,"summary":null,"term":"GO:0097466"}],"cellular_component":[{"annotations":[93904],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[67154],"is_not":false,"summary":null,"term":"GO:0044322"},{"annotations":[67151],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[67150],"is_not":false,"summary":null,"term":"GO:0005509"},{"annotations":[93910],"is_not":false,"summary":null,"term":"GO:0030246"},{"annotations":[67152],"is_not":false,"summary":null,"term":"GO:0004571"}],"sequence":[{"annotations":[81087],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR001382","EnsemblGenomes-Tr:EEB06802","InterPro:IPR012341","InterPro:IPR036026","UniProtKB/TrEMBL:B6JZ34","EnsemblGenomes-Gn:SJAG_01858","GOA:B6JZ34"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rbm8","uniquename":"SJAG_01852"},{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"}],"genes_by_uniquename":{"HGNC:18967":null,"SJAG_01858":null,"SPAC23A1.04c":null,"YHR204W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyl hydrolase family 47","id":"PF01532","interpro_description":"Glycoside hydrolase family 47","interpro_id":"IPR001382","interpro_name":"Glyco_hydro_47","locations":[{"end":477,"start":43}],"match_end":477,"match_start":43,"name":"Glyco_hydro_47"},{"dbname":"PRINTS","description":"Glycosyl hydrolase family 47 signature","id":"PR00747","interpro_description":"Glycoside hydrolase family 47","interpro_id":"IPR001382","interpro_name":"Glyco_hydro_47","locations":[{"end":63,"start":43},{"end":103,"start":89},{"end":144,"start":126},{"end":195,"start":176},{"end":284,"start":267},{"end":342,"start":326},{"end":405,"start":381},{"end":459,"start":439}],"match_end":459,"match_start":43,"name":"GLYHDRLASE47"},{"dbname":"SUPERFAMILY","id":"SSF48225","interpro_description":"Seven-hairpin glycosidases","interpro_id":"IPR036026","interpro_name":"Seven-hairpin_glycosidases","locations":[{"end":478,"start":30}],"match_end":478,"match_start":30,"name":"Seven-hairpin glycosidases"},{"dbname":"GENE3D","id":"G3DSA:1.50.10.10","interpro_description":"Six-hairpin glycosidase-like superfamily","interpro_id":"IPR012341","interpro_name":"6hp_glycosidase-like_sf","locations":[{"end":487,"start":26}],"match_end":487,"match_start":26},{"dbname":"PANTHER","id":"PTHR45679","interpro_description":"ER degradation-enhancing alpha-mannosidase-like protein 1/2/3","interpro_id":"IPR044674","interpro_name":"EDEM1/2/3","locations":[{"end":488,"start":12}],"match_end":488,"match_start":12,"name":"ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2"}],"location":{"chromosome_name":"supercont5.3","end_pos":2496873,"start_pos":2494194,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":100,"start":88}},{"range":{"end":220,"start":209}},{"range":{"end":742,"start":730}}],"name":"mnl1","ortholog_annotations":[{"gene_uniquename":"SJAG_01858","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18967","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01858","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01858","ortholog_taxonid":4932,"ortholog_uniquename":"YHR204W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01858","ortholog_taxonid":4932,"ortholog_uniquename":"YHR204W","reference_uniquename":"PMID:26896847"}],"product":"alpha mannosidase Mnl1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":23,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030246","GO:0005509"],"not-binding":["GO:0004571"]}},"subset_termids":["GO:0030163","GO:0005783","GO:0005829","GO:0016798"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004571":null,"GO:0005509":null,"GO:0005829":null,"GO:0016020":null,"GO:0030246":null,"GO:0044322":null,"GO:0097466":null,"GO:1904380":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01858.1"],"transcripts_by_uniquename":{"SJAG_01858.1":null},"uniprot_identifier":"B6JZ34","uniquename":"SJAG_01858"}


id: SJAG_01859
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74319],"is_not":false,"summary":null,"term":"GO:0006168"},{"annotations":[74315],"is_not":false,"summary":null,"term":"GO:0044209"},{"annotations":[61982],"is_not":false,"summary":null,"term":"GO:0006166"}],"cellular_component":[{"annotations":[93895],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93896],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74317],"is_not":false,"summary":null,"term":"GO:0002055"},{"annotations":[74318],"is_not":false,"summary":null,"term":"GO:0003999"},{"annotations":[74314],"is_not":false,"summary":null,"term":"GO:0016208"}],"mondo":[{"annotations":[86514],"is_not":false,"summary":null,"term":"MONDO:0013869"}]},"dbxrefs":["InterPro:IPR005764","UniProtKB/TrEMBL:B6JZ35","EnsemblGenomes-Gn:SJAG_01859","GOA:B6JZ35","InterPro:IPR029057","InterPro:IPR000836","EnsemblGenomes-Tr:EEB06803"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl34a","uniquename":"SJAG_01853"},{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"}],"genes_by_uniquename":{"HGNC:626":null,"SJAG_01859":null,"SPAC23A1.03":null,"YDR441C":null,"YML022W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphoribosyl transferase domain","id":"PF00156","interpro_description":"Phosphoribosyltransferase domain","interpro_id":"IPR000836","interpro_name":"PRibTrfase_dom","locations":[{"end":156,"start":36}],"match_end":156,"match_start":36,"name":"Pribosyltran"},{"dbname":"CDD","description":"PRTases_typeI","id":"cd06223","interpro_description":"Phosphoribosyltransferase domain","interpro_id":"IPR000836","interpro_name":"PRibTrfase_dom","locations":[{"end":166,"start":42}],"match_end":166,"match_start":42,"name":"PRTases_typeI"},{"dbname":"FUNFAM","description":"Adenine phosphoribosyltransferase","id":"G3DSA:3.40.50.2020:FF:000004","locations":[{"end":180,"start":2}],"match_end":180,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF53271","interpro_description":"Phosphoribosyltransferase-like","interpro_id":"IPR029057","interpro_name":"PRTase-like","locations":[{"end":174,"start":15}],"match_end":174,"match_start":15,"name":"PRTase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2020","interpro_description":"Phosphoribosyltransferase-like","interpro_id":"IPR029057","interpro_name":"PRTase-like","locations":[{"end":183,"start":2}],"match_end":183,"match_start":2},{"dbname":"PANTHER","id":"PTHR32315","interpro_description":"Uracil phosphoribosyltransferase/Adenine phosphoribosyltransferase","interpro_id":"IPR050054","interpro_name":"UPRTase/APRTase","locations":[{"end":178,"start":3}],"match_end":178,"match_start":3,"name":"ADENINE PHOSPHORIBOSYLTRANSFERASE"},{"dbname":"HAMAP","description":"Adenine phosphoribosyltransferase [apt].","id":"MF_00004","interpro_description":"Adenine phosphoribosyl transferase","interpro_id":"IPR005764","interpro_name":"Ade_phspho_trans","locations":[{"end":177,"start":9}],"match_end":177,"match_start":9,"name":"Aden_phosphoribosyltr"},{"dbname":"NCBIFAM","description":"adenine phosphoribosyltransferase","id":"TIGR01090","interpro_description":"Adenine phosphoribosyl transferase","interpro_id":"IPR005764","interpro_name":"Ade_phspho_trans","locations":[{"end":175,"start":10}],"match_end":175,"match_start":10,"name":"apt"},{"dbname":"NCBIFAM","description":"adenine phosphoribosyltransferase","id":"NF002636","locations":[{"end":170,"start":5}],"match_end":170,"match_start":5,"name":"PRK02304.1-5"}],"location":{"chromosome_name":"supercont5.3","end_pos":2497950,"start_pos":2497044,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":104,"start":93}}],"name":"apt1","ortholog_annotations":[{"gene_uniquename":"SJAG_01859","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:626","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01859","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01859","ortholog_taxonid":4932,"ortholog_uniquename":"YDR441C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01859","ortholog_taxonid":4932,"ortholog_uniquename":"YML022W","reference_uniquename":"PMID:29761456"}],"product":"adenine phosphoribosyltransferase (APRT) Apt1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0016208","GO:0002055"],"not-binding":["GO:0003999"]}},"subset_termids":["MONDO:0005066","MONDO:0004736","GO:0055086","GO:0005829","MONDO:0019254","GO:0005634","GO:0016757"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002055":null,"GO:0003999":null,"GO:0005634":null,"GO:0005829":null,"GO:0006166":null,"GO:0006168":null,"GO:0016208":null,"GO:0044209":null,"MONDO:0013869":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01859.1"],"transcripts_by_uniquename":{"SJAG_01859.1":null},"uniprot_identifier":"B6JZ35","uniquename":"SJAG_01859"}


id: SJAG_01860
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76832],"is_not":false,"summary":null,"term":"GO:0006506"}],"cellular_component":[{"annotations":[93892],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[93894],"is_not":false,"summary":null,"term":"GO:0062050"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06804","InterPro:IPR029052","GOA:B6JZ36","InterPro:IPR033307","EnsemblGenomes-Gn:SJAG_01860","InterPro:IPR004843","UniProtKB/TrEMBL:B6JZ36","InterPro:IPR033308"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rnf170","uniquename":"SJAG_01854"},{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"}],"genes_by_uniquename":{"HGNC:15988":null,"SJAG_01860":null,"SPAC23A1.02c":null,"YIL039W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Calcineurin-like phosphoesterase","id":"PF00149","interpro_description":"Calcineurin-like phosphoesterase domain, ApaH type","interpro_id":"IPR004843","interpro_name":"Calcineurin-like_PHP_ApaH","locations":[{"end":327,"start":84}],"match_end":327,"match_start":84,"name":"Metallophos"},{"dbname":"SUPERFAMILY","id":"SSF56300","interpro_description":"Metallo-dependent phosphatase-like","interpro_id":"IPR029052","interpro_name":"Metallo-depent_PP-like","locations":[{"end":210,"start":53},{"end":356,"start":250}],"match_end":356,"match_start":53,"name":"Metallo-dependent phosphatases"},{"dbname":"GENE3D","id":"G3DSA:3.60.21.10","interpro_description":"Metallo-dependent phosphatase-like","interpro_id":"IPR029052","interpro_name":"Metallo-depent_PP-like","locations":[{"end":357,"start":66}],"match_end":357,"match_start":66},{"dbname":"PANTHER","id":"PTHR13315","interpro_description":"PGAP5/Cdc1/Ted1","interpro_id":"IPR033308","interpro_name":"PGAP5/Cdc1/Ted1","locations":[{"end":405,"start":18}],"match_end":405,"match_start":18,"name":"METALLO PHOSPHOESTERASE RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2500160,"start_pos":2498865,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":420,"start":411}}],"name":"ted1","ortholog_annotations":[{"gene_uniquename":"SJAG_01860","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15988","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01860","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01860","ortholog_taxonid":4932,"ortholog_uniquename":"YIL039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01860","ortholog_taxonid":4932,"ortholog_uniquename":"YIL039W","reference_uniquename":"PMID:26896847"}],"product":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase Ted1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0062050"]}},"subset_termids":["GO:0005789","GO:0016788","GO:0005783","GO:0051604","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0006506":null,"GO:0062050":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":42,"start":20}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01860.1"],"transcripts_by_uniquename":{"SJAG_01860.1":null},"uniprot_identifier":"B6JZ36","uniquename":"SJAG_01860"}


id: SJAG_01861
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":255,"start":19}}],"cv_annotations":{"cellular_component":[{"annotations":[92215],"is_not":false,"summary":null,"term":"GO:0009986"}],"sequence":[{"annotations":[80815],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01861","UniProtKB/TrEMBL:B6JZ37","InterPro:IPR018466","EnsemblGenomes-Tr:EEB06805"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cmk2","uniquename":"SJAG_01855"},{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"}],"genes_by_uniquename":{"SJAG_01861":null,"SPAC19G12.16c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Kre9/KNH-like N-terminal Ig-like domain","id":"PF10342","interpro_description":"Yeast cell wall synthesis Kre9/Knh1-like, N-terminal","interpro_id":"IPR018466","interpro_name":"Kre9/Knh1-like_N","locations":[{"end":111,"start":23}],"match_end":111,"match_start":23,"name":"Kre9_KNH"},{"dbname":"PANTHER","id":"PTHR35185","interpro_description":"GPI-anchored Adhesion Regulator","interpro_id":"IPR052479","interpro_name":"GPI-anchor_Adhesion_Reg","locations":[{"end":227,"start":7}],"match_end":227,"match_start":7,"name":"SERINE/THREONINE-RICH PROTEIN ADG2-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2501644,"start_pos":2500877,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":72,"start":65}},{"range":{"end":179,"start":110}},{"range":{"end":224,"start":189}},{"range":{"end":254,"start":243}}],"name":"adg2","ortholog_annotations":[{"gene_uniquename":"SJAG_01861","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.16c","reference_uniquename":"PMID:21511999"}],"product":"conserved fungal cell surface protein, Kre9/Knh1 family, Adg2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":18,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0009986"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0009986":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01861.1"],"transcripts_by_uniquename":{"SJAG_01861.1":null},"uniprot_identifier":"B6JZ37","uniquename":"SJAG_01861"}


id: SJAG_01862
data:
  {"cv_annotations":{"biological_process":[{"annotations":[69523],"is_not":false,"summary":null,"term":"GO:0005992"}],"cellular_component":[{"annotations":[80269],"is_not":false,"summary":null,"term":"GO:0005946"}],"molecular_function":[{"annotations":[80268],"is_not":false,"summary":null,"term":"GO:0004805"}]},"dbxrefs":["InterPro:IPR036412","EnsemblGenomes-Gn:SJAG_01862","InterPro:IPR006379","EnsemblGenomes-Tr:EEB06806","InterPro:IPR003337","InterPro:IPR001830","GOA:B6JZ38","InterPro:IPR023214","UniProtKB/TrEMBL:B6JZ38"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tsc3","uniquename":"SJAG_01857"},{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"}],"genes_by_uniquename":{"SJAG_01862":null,"SPAC19G12.15c":null,"YDR074W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyltransferase family 20","id":"PF00982","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":539,"start":143}],"match_end":539,"match_start":143,"name":"Glyco_transf_20"},{"dbname":"PFAM","description":"Trehalose-phosphatase","id":"PF02358","interpro_description":"Trehalose-phosphatase","interpro_id":"IPR003337","interpro_name":"Trehalose_PPase","locations":[{"end":803,"start":572}],"match_end":803,"match_start":572,"name":"Trehalose_PPase"},{"dbname":"CDD","description":"HAD_TPP","id":"cd01627","locations":[{"end":808,"start":570}],"match_end":808,"match_start":570,"name":"HAD_TPP"},{"dbname":"CDD","description":"GT20_TPS","id":"cd03788","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":539,"start":35}],"match_end":539,"match_start":35,"name":"GT20_TPS"},{"dbname":"FUNFAM","description":"Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1","id":"G3DSA:3.30.70.1020:FF:000001","locations":[{"end":734,"start":654}],"match_end":734,"match_start":654},{"dbname":"FUNFAM","description":"Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6","id":"G3DSA:3.40.50.1000:FF:000052","locations":[{"end":819,"start":700}],"match_end":819,"match_start":700},{"dbname":"SUPERFAMILY","id":"SSF53756","locations":[{"end":95,"start":35},{"end":538,"start":136}],"match_end":538,"match_start":35,"name":"UDP-Glycosyltransferase/glycogen phosphorylase"},{"dbname":"SUPERFAMILY","id":"SSF56784","interpro_description":"HAD-like superfamily","interpro_id":"IPR036412","interpro_name":"HAD-like_sf","locations":[{"end":816,"start":569}],"match_end":816,"match_start":569,"name":"HAD-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.1020","locations":[{"end":734,"start":653}],"match_end":734,"match_start":653},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2000","locations":[{"end":522,"start":25}],"match_end":522,"match_start":25,"name":"Glycogen Phosphorylase B;"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1000","interpro_description":"HAD superfamily","interpro_id":"IPR023214","interpro_name":"HAD_sf","locations":[{"end":652,"start":571},{"end":792,"start":735}],"match_end":792,"match_start":571},{"dbname":"PANTHER","id":"PTHR10788","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":816,"start":32}],"match_end":816,"match_start":32,"name":"TREHALOSE-6-PHOSPHATE SYNTHASE"},{"dbname":"NCBIFAM","description":"trehalose-phosphatase","id":"TIGR00685","interpro_description":"Trehalose-phosphatase","interpro_id":"IPR003337","interpro_name":"Trehalose_PPase","locations":[{"end":815,"start":566}],"match_end":815,"match_start":566,"name":"T6PP"},{"dbname":"NCBIFAM","description":"HAD-IIB family hydrolase","id":"TIGR01484","interpro_description":"HAD-superfamily hydrolase, subfamily IIB","interpro_id":"IPR006379","interpro_name":"HAD-SF_hydro_IIB","locations":[{"end":774,"start":570}],"match_end":774,"match_start":570,"name":"HAD-SF-IIB"}],"location":{"chromosome_name":"supercont5.3","end_pos":2504912,"start_pos":2502453,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":195,"start":180}}],"name":"tpp1","ortholog_annotations":[{"gene_uniquename":"SJAG_01862","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01862","ortholog_taxonid":4932,"ortholog_uniquename":"YDR074W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01862","ortholog_taxonid":4932,"ortholog_uniquename":"YDR074W","reference_uniquename":"PMID:26896847"}],"product":"trehalose-6-phosphate phosphatase Tpp1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004805"]}},"subset_termids":["GO:0016788","GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004805":null,"GO:0005946":null,"GO:0005992":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01862.1"],"transcripts_by_uniquename":{"SJAG_01862.1":null},"uniprot_identifier":"B6JZ38","uniquename":"SJAG_01862"}


id: SJAG_01863
data:
  {"coiled_coil_coords":[{"range":{"end":205,"start":185}}],"cv_annotations":{"biological_process":[{"annotations":[92202],"is_not":false,"summary":null,"term":"GO:1902635"},{"annotations":[92203],"is_not":false,"summary":null,"term":"GO:0030989"},{"annotations":[92205],"is_not":false,"summary":null,"term":"GO:1902412"}],"cellular_component":[{"annotations":[92200],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[79854],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[92206],"is_not":false,"summary":null,"term":"GO:0052811"},{"annotations":[79853],"is_not":false,"summary":null,"term":"GO:0016308"},{"annotations":[69045],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[92209],"is_not":false,"summary":null,"term":"GO:0005543"}],"mondo":[{"annotations":[85847],"is_not":false,"summary":null,"term":"MONDO:0012656"}]},"dbxrefs":["InterPro:IPR023610","InterPro:IPR027484","InterPro:IPR027483","EnsemblGenomes-Tr:EEB06807","InterPro:IPR002498","GOA:B6JZ39","EnsemblGenomes-Gn:SJAG_01863","UniProtKB/TrEMBL:B6JZ39"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":44,"start":1}},{"range":{"end":181,"start":84}},{"range":{"end":691,"start":630}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mnl1","uniquename":"SJAG_01858"},{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"}],"genes_by_uniquename":{"HGNC:8994":null,"HGNC:8995":null,"HGNC:8996":null,"SJAG_01863":null,"SPAC19G12.14":null,"YDR208W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphatidylinositol-4-phosphate 5-Kinase","id":"PF01504","interpro_description":"Phosphatidylinositol-4-phosphate 4/5-kinase, core","interpro_id":"IPR002498","interpro_name":"PInositol-4-P-4/5-kinase_core","locations":[{"end":610,"start":302}],"match_end":610,"match_start":302,"name":"PIP5K"},{"dbname":"CDD","description":"PIPKc_PIP5K_yeast_like","id":"cd17303","locations":[{"end":610,"start":220}],"match_end":610,"match_start":220,"name":"PIPKc_PIP5K_yeast_like"},{"dbname":"PROSITE_PROFILES","description":"Phosphatidylinositol phosphate kinase (PIPK) domain profile.","id":"PS51455","interpro_description":"Phosphatidylinositol-4-phosphate 4/5-kinase, core","interpro_id":"IPR002498","interpro_name":"PInositol-4-P-4/5-kinase_core","locations":[{"end":612,"start":216}],"match_end":612,"match_start":216,"name":"PIPK"},{"dbname":"SMART","id":"SM00330","interpro_description":"Phosphatidylinositol-4-phosphate 4/5-kinase, core","interpro_id":"IPR002498","interpro_name":"PInositol-4-P-4/5-kinase_core","locations":[{"end":613,"start":246}],"match_end":613,"match_start":246,"name":"PIPK_2"},{"dbname":"FUNFAM","description":"Phosphatidylinositol 4-phosphate 5-kinase its3","id":"G3DSA:3.30.800.10:FF:000009","locations":[{"end":384,"start":206}],"match_end":384,"match_start":206},{"dbname":"SUPERFAMILY","id":"SSF56104","locations":[{"end":611,"start":215}],"match_end":611,"match_start":215,"name":"SAICAR synthase-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.810.10","interpro_description":"Phosphatidylinositol-4-phosphate 4/5-kinase, C-terminal domain superfamily","interpro_id":"IPR027483","interpro_name":"PInositol-4-P-4/5-kinase_C_sf","locations":[{"end":508,"start":385},{"end":611,"start":547}],"match_end":611,"match_start":385},{"dbname":"GENE3D","id":"G3DSA:3.30.800.10","interpro_description":"Phosphatidylinositol-4-phosphate 5-kinase, N-terminal","interpro_id":"IPR027484","interpro_name":"PInositol-4-P-5-kinase_N","locations":[{"end":384,"start":206}],"match_end":384,"match_start":206,"name":"Phosphatidylinositol Phosphate Kinase II Beta"},{"dbname":"PANTHER","id":"PTHR23086","interpro_description":"Phosphatidylinositol-4/5-phosphate 5/4-kinase","interpro_id":"IPR023610","interpro_name":"PInositol-4/5-P-5/4-kinase","locations":[{"end":612,"start":8}],"match_end":612,"match_start":8,"name":"PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":205,"start":185}],"match_end":205,"match_start":185,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":44,"start":1},{"end":181,"start":84},{"end":691,"start":630}],"match_end":691,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":667,"start":653}],"match_end":667,"match_start":653,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":12,"start":1},{"end":35,"start":25},{"end":94,"start":84},{"end":153,"start":117}],"match_end":153,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":24,"start":13}],"match_end":24,"match_start":13,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2507764,"start_pos":2505553,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":52,"start":41}},{"range":{"end":666,"start":652}}],"name":"its3","ortholog_annotations":[{"gene_uniquename":"SJAG_01863","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8994","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01863","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8995","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01863","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8996","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01863","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01863","ortholog_taxonid":4932,"ortholog_uniquename":"YDR208W","reference_uniquename":"PMID:29761456"}],"product":"1-phosphatidylinositol-4-phosphate 5-kinase Its3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0005543"],"not-binding":["GO:0016308","GO:0052811"]}},"subset_termids":["GO:0000281","GO:0006629","GO:0140013","GO:0016301","GO:0008289","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005543":null,"GO:0005886":null,"GO:0016308":null,"GO:0030989":null,"GO:0032153":null,"GO:0052811":null,"GO:1902412":null,"GO:1902635":null,"MONDO:0012656":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01863.1"],"transcripts_by_uniquename":{"SJAG_01863.1":null},"uniprot_identifier":"B6JZ39","uniquename":"SJAG_01863"}


id: SJAG_01864
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92196],"is_not":false,"summary":null,"term":"GO:0016233"},{"annotations":[92198],"is_not":false,"summary":null,"term":"GO:0010833"}],"cellular_component":[{"annotations":[92193],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92195],"is_not":false,"summary":null,"term":"GO:0070187"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06808","EnsemblGenomes-Gn:SJAG_01864","UniProtKB/TrEMBL:B6JZ40"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apt1","uniquename":"SJAG_01859"},{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"}],"genes_by_uniquename":{"SJAG_01864":null,"SPAC19G12.13c":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.3","end_pos":2509928,"start_pos":2508932,"strand":"forward"},"name":"poz1","ortholog_annotations":[{"gene_uniquename":"SJAG_01864","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.13c","reference_uniquename":"PMID:21511999"}],"product":"shelterin complex subunit Poz1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005694","GO:0005634","GO:0032200","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0010833":null,"GO:0016233":null,"GO:0070187":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01864.1"],"transcripts_by_uniquename":{"SJAG_01864.1":null},"uniprot_identifier":"B6JZ40","uniquename":"SJAG_01864"}


id: SJAG_01865
data:
  {"coiled_coil_coords":[{"range":{"end":63,"start":43}}],"cv_annotations":{"biological_process":[{"annotations":[79037],"is_not":false,"summary":null,"term":"GO:0008299"},{"annotations":[79036],"is_not":false,"summary":null,"term":"GO:0006744"},{"annotations":[119529],"is_not":false,"summary":null,"term":"GO:0006743"}],"cellular_component":[{"annotations":[92187],"is_not":false,"summary":null,"term":"GO:0032478"}],"molecular_function":[{"annotations":[119527],"is_not":false,"summary":null,"term":"GO:0097269"}],"mondo":[{"annotations":[86661],"is_not":false,"summary":null,"term":"MONDO:0013838"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01865","InterPro:IPR008949","GOA:B6JZ41","UniProtKB/TrEMBL:B6JZ41","InterPro:IPR000092","EnsemblGenomes-Tr:EEB06809"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:29191091","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ted1","uniquename":"SJAG_01860"},{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"}],"genes_by_uniquename":{"HGNC:23041":null,"SJAG_01865":null,"SJAG_04568":null,"SPAC19G12.12":null,"YBR003W":null},"genetic_interactions":[[{"gene_a_uniquename":"SJAG_01865","gene_b_uniquename":"SJAG_04568","interaction_type":"Synthetic Rescue"},[{"annotation_date":"2021-07-15","reference_uniquename":"PMID:29191091","source_database":"JaponicusDB","throughput":"low"}]]],"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Polyprenyl synthetase","id":"PF00348","interpro_description":"Polyprenyl synthetase-like","interpro_id":"IPR000092","interpro_name":"Polyprenyl_synt","locations":[{"end":240,"start":65}],"match_end":240,"match_start":65,"name":"polyprenyl_synt"},{"dbname":"CDD","description":"Trans_IPPS","id":"cd00867","locations":[{"end":240,"start":84}],"match_end":240,"match_start":84,"name":"Trans_IPPS"},{"dbname":"SUPERFAMILY","id":"SSF48576","interpro_description":"Isoprenoid synthase domain superfamily","interpro_id":"IPR008949","interpro_name":"Isoprenoid_synthase_dom_sf","locations":[{"end":281,"start":35}],"match_end":281,"match_start":35,"name":"Terpenoid synthases"},{"dbname":"GENE3D","id":"G3DSA:1.10.600.10","interpro_description":"Isoprenoid synthase domain superfamily","interpro_id":"IPR008949","interpro_name":"Isoprenoid_synthase_dom_sf","locations":[{"end":242,"start":34}],"match_end":242,"match_start":34,"name":"Farnesyl Diphosphate Synthase"},{"dbname":"PANTHER","id":"PTHR12001","locations":[{"end":240,"start":21}],"match_end":240,"match_start":21,"name":"GERANYLGERANYL PYROPHOSPHATE SYNTHASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":63,"start":43}],"match_end":63,"match_start":43,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2510866,"start_pos":2510006,"strand":"reverse"},"name":"dlp1","ortholog_annotations":[{"gene_uniquename":"SJAG_01865","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23041","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01865","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01865","ortholog_taxonid":4932,"ortholog_uniquename":"YBR003W","reference_uniquename":"PMID:29761456"}],"product":"decaprenyl diphosphate synthase subunit 2 Dlp1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29191091":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0097269"]}},"subset_termids":["MONDO:0004069","MONDO:0005244","GO:0016765","MONDO:0005066","GO:0006629","GO:0006744","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:0008299":null,"GO:0032478":null,"GO:0097269":null,"MONDO:0013838":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01865.1"],"transcripts_by_uniquename":{"SJAG_01865.1":null},"uniprot_identifier":"B6JZ41","uniquename":"SJAG_01865"}


id: SJAG_01866
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74235],"is_not":false,"summary":null,"term":"GO:0006744"}],"cellular_component":[{"annotations":[74233],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[74234],"is_not":false,"summary":null,"term":"GO:0008289"}],"mondo":[{"annotations":[86658],"is_not":false,"summary":null,"term":"MONDO:0013840"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01866","EnsemblGenomes-Tr:EEB06810","InterPro:IPR013718","InterPro:IPR012762","UniProtKB/TrEMBL:B6JZ42","GOA:B6JZ42"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"adg2","uniquename":"SJAG_01861"},{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"}],"genes_by_uniquename":{"HGNC:25302":null,"SJAG_01866":null,"SPAC19G12.11":null,"YLR201C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"COQ9","id":"PF08511","interpro_description":"COQ9, C-terminal domain","interpro_id":"IPR013718","interpro_name":"COQ9_C","locations":[{"end":223,"start":154}],"match_end":223,"match_start":154,"name":"COQ9"},{"dbname":"GENE3D","id":"G3DSA:1.10.357.10","locations":[{"end":223,"start":46}],"match_end":223,"match_start":46,"name":"Tetracycline Repressor, domain 2"},{"dbname":"PANTHER","id":"PTHR21427","interpro_description":"Ubiquinone biosynthesis protein COQ9","interpro_id":"IPR012762","interpro_name":"Ubiq_biosynth_COQ9","locations":[{"end":247,"start":41}],"match_end":247,"match_start":41,"name":"UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL"},{"dbname":"NCBIFAM","description":"COQ9 family protein","id":"TIGR02396","interpro_description":"Ubiquinone biosynthesis protein COQ9","interpro_id":"IPR012762","interpro_name":"Ubiq_biosynth_COQ9","locations":[{"end":229,"start":48}],"match_end":229,"match_start":48,"name":"diverge_rpsU"}],"location":{"chromosome_name":"supercont5.3","end_pos":2512117,"start_pos":2511365,"strand":"reverse"},"name":"coq9","ortholog_annotations":[{"gene_uniquename":"SJAG_01866","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25302","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01866","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01866","ortholog_taxonid":4932,"ortholog_uniquename":"YLR201C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01866","ortholog_taxonid":4932,"ortholog_uniquename":"YLR201C","reference_uniquename":"PMID:26896847"}],"product":"ubiquinone biosynthesis protein Coq9","references_by_uniquename":{"GO_REF:0000033":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008289"]}},"subset_termids":["GO:0006744","MONDO:0005244","GO:0008289","GO:0005739","MONDO:0005066","MONDO:0004069"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0006744":null,"GO:0008289":null,"MONDO:0013840":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01866.1"],"transcripts_by_uniquename":{"SJAG_01866.1":null},"uniprot_identifier":"B6JZ42","uniquename":"SJAG_01866"}


id: SJAG_01867
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92223],"is_not":false,"summary":null,"term":"GO:0033621"},{"annotations":[92224],"is_not":false,"summary":null,"term":"GO:1902801"},{"annotations":[92225],"is_not":false,"summary":null,"term":"GO:0043628"}],"cellular_component":[{"annotations":[92216],"is_not":false,"summary":null,"term":"GO:1905754"},{"annotations":[92217],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[92218],"is_not":false,"summary":null,"term":"GO:1990342"},{"annotations":[92219],"is_not":false,"summary":null,"term":"GO:1990251"},{"annotations":[92222],"is_not":false,"summary":null,"term":"GO:0033553"}],"molecular_function":[{"annotations":[92226],"is_not":false,"summary":null,"term":"GO:0140678"}]},"dbxrefs":["GOA:B6JZ43","EnsemblGenomes-Gn:SJAG_01867","EnsemblGenomes-Tr:EEB06811","UniProtKB/TrEMBL:B6JZ43","InterPro:IPR000781","InterPro:IPR035912"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tpp1","uniquename":"SJAG_01862"},{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"}],"genes_by_uniquename":{"HGNC:3447":null,"SJAG_01867":null,"SPAC19G12.17":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Enhancer of rudimentary","id":"PF01133","interpro_description":"Enhancer of rudimentary","interpro_id":"IPR000781","interpro_name":"ERH","locations":[{"end":97,"start":9}],"match_end":97,"match_start":9,"name":"ER"},{"dbname":"SUPERFAMILY","id":"SSF143875","interpro_description":"Enhancer of rudimentary superfamily","interpro_id":"IPR035912","interpro_name":"EHR_sf","locations":[{"end":97,"start":9}],"match_end":97,"match_start":9,"name":"ERH-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.2260.10","interpro_description":"Enhancer of rudimentary superfamily","interpro_id":"IPR035912","interpro_name":"EHR_sf","locations":[{"end":101,"start":7}],"match_end":101,"match_start":7,"name":"Enhancer of rudimentary"},{"dbname":"PANTHER","id":"PTHR12373","interpro_description":"Enhancer of rudimentary","interpro_id":"IPR000781","interpro_name":"ERH","locations":[{"end":97,"start":6}],"match_end":97,"match_start":6,"name":"ENHANCER OF RUDIMENTARY ERH"}],"location":{"chromosome_name":"supercont5.3","end_pos":2513208,"start_pos":2512429,"strand":"forward"},"name":"erh1","ortholog_annotations":[{"gene_uniquename":"SJAG_01867","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3447","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01867","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.17","reference_uniquename":"PMID:26896847"}],"product":"enhancer of rudimentary homolog Erh1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140678"]}},"subset_termids":["GO:0005654","GO:0005634","GO:0005694","GO:0006325","GO:0098772","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0033553":null,"GO:0033621":null,"GO:0043628":null,"GO:0140678":null,"GO:1902801":null,"GO:1905754":null,"GO:1990251":null,"GO:1990342":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01867.1"],"transcripts_by_uniquename":{"SJAG_01867.1":null},"uniprot_identifier":"B6JZ43","uniquename":"SJAG_01867"}


id: SJAG_01868
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":1055,"start":18}}],"cv_annotations":{"biological_process":[{"annotations":[92180],"is_not":false,"summary":null,"term":"GO:0007039"},{"annotations":[92181],"is_not":false,"summary":null,"term":"GO:0031638"}],"cellular_component":[{"annotations":[79836],"is_not":false,"summary":null,"term":"GO:0000324"}],"molecular_function":[{"annotations":[79837],"is_not":false,"summary":null,"term":"GO:0004185"}],"mondo":[{"annotations":[85837],"is_not":false,"summary":null,"term":"MONDO:0009737"}],"sequence":[{"annotations":[80943],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01868","InterPro:IPR018202","EnsemblGenomes-Tr:EEB06812","InterPro:IPR033124","InterPro:IPR001563","UniProtKB/TrEMBL:B6JZ44","GOA:B6JZ44","InterPro:IPR029058"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":446,"start":77}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"its3","uniquename":"SJAG_01863"},{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"}],"genes_by_uniquename":{"HGNC:9251":null,"SJAG_01868":null,"SPAC19G12.10c":null,"YBR139W":null,"YMR297W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Serine carboxypeptidase","id":"PF00450","interpro_description":"Peptidase S10, serine carboxypeptidase","interpro_id":"IPR001563","interpro_name":"Peptidase_S10","locations":[{"end":1051,"start":636}],"match_end":1051,"match_start":636,"name":"Peptidase_S10"},{"dbname":"PROSITE_PATTERNS","description":"Serine carboxypeptidases, histidine active site.","id":"PS00560","interpro_description":"Serine carboxypeptidases, histidine active site","interpro_id":"IPR033124","interpro_name":"Ser_caboxypep_his_AS","locations":[{"end":1038,"start":1021}],"match_end":1038,"match_start":1021,"name":"CARBOXYPEPT_SER_HIS"},{"dbname":"PROSITE_PATTERNS","description":"Serine carboxypeptidases, serine active site.","id":"PS00131","interpro_description":"Serine carboxypeptidase, serine active site","interpro_id":"IPR018202","interpro_name":"Ser_caboxypep_ser_AS","locations":[{"end":769,"start":762}],"match_end":769,"match_start":762,"name":"CARBOXYPEPT_SER_SER"},{"dbname":"PRINTS","description":"Carboxypeptidase C serine protease (S10) family signature","id":"PR00724","interpro_description":"Peptidase S10, serine carboxypeptidase","interpro_id":"IPR001563","interpro_name":"Peptidase_S10","locations":[{"end":726,"start":703},{"end":773,"start":748},{"end":1034,"start":1021}],"match_end":1034,"match_start":703,"name":"CRBOXYPTASEC"},{"dbname":"FUNFAM","description":"Carboxypeptidase Y","id":"G3DSA:1.10.287.410:FF:000001","locations":[{"end":886,"start":816}],"match_end":886,"match_start":816},{"dbname":"SUPERFAMILY","id":"SSF53474","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":1051,"start":636}],"match_end":1051,"match_start":636,"name":"alpha/beta-Hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1820","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":815,"start":639},{"end":1049,"start":887}],"match_end":1049,"match_start":639,"name":"alpha/beta hydrolase"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.410","locations":[{"end":886,"start":816}],"match_end":886,"match_start":816},{"dbname":"PANTHER","id":"PTHR11802","interpro_description":"Peptidase S10, serine carboxypeptidase","interpro_id":"IPR001563","interpro_name":"Peptidase_S10","locations":[{"end":1038,"start":638}],"match_end":1038,"match_start":638,"name":"SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":446,"start":77}],"match_end":446,"match_start":77,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":107,"start":98}],"match_end":107,"match_start":98,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":122,"start":108},{"end":435,"start":151}],"match_end":435,"match_start":108,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":150,"start":123}],"match_end":150,"match_start":123,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2516796,"start_pos":2513629,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":12,"start":1}},{"range":{"end":160,"start":92}},{"range":{"end":374,"start":363}},{"range":{"end":435,"start":410}}],"name":"cpy1","ortholog_annotations":[{"gene_uniquename":"SJAG_01868","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9251","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01868","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01868","ortholog_taxonid":4932,"ortholog_uniquename":"YBR139W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01868","ortholog_taxonid":4932,"ortholog_uniquename":"YBR139W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01868","ortholog_taxonid":4932,"ortholog_uniquename":"YMR297W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01868","ortholog_taxonid":4932,"ortholog_uniquename":"YMR297W","reference_uniquename":"PMID:26896847"}],"product":"vacuolar carboxypeptidase Y","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":17,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004185"]}},"subset_termids":["GO:0008233","GO:0030163","MONDO:0005066","MONDO:0002561","MONDO:0037792","MONDO:0005328","GO:0140096","GO:0051604","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0004185":null,"GO:0007039":null,"GO:0031638":null,"MONDO:0009737":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01868.1"],"transcripts_by_uniquename":{"SJAG_01868.1":null},"uniprot_identifier":"B6JZ44","uniquename":"SJAG_01868"}


id: SJAG_01869
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":55,"start":55}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":110,"start":110}}],"cv_annotations":{"biological_process":[{"annotations":[92172],"is_not":false,"summary":null,"term":"GO:0043387"}],"cellular_component":[{"annotations":[92170],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92171],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[92173],"is_not":false,"summary":null,"term":"GO:0004032"},{"annotations":[92174],"is_not":false,"summary":null,"term":"GO:0051268"},{"annotations":[92175],"is_not":false,"summary":null,"term":"GO:0051269"},{"annotations":[92176],"is_not":false,"summary":null,"term":"GO:0047018"},{"annotations":[92177],"is_not":false,"summary":null,"term":"GO:0047019"},{"annotations":[68301],"is_not":false,"summary":null,"term":"GO:0016652"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01869","InterPro:IPR036812","InterPro:IPR020471","UniProtKB/TrEMBL:B6JZ45","InterPro:IPR023210","GOA:B6JZ45","EnsemblGenomes-Tr:EEB06813","InterPro:IPR018170"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"poz1","uniquename":"SJAG_01864"},{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"}],"genes_by_uniquename":{"SJAG_01869":null,"SPAC19G12.09":null,"YDL124W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aldo/keto reductase family","id":"PF00248","interpro_description":"NADP-dependent oxidoreductase domain","interpro_id":"IPR023210","interpro_name":"NADP_OxRdtase_dom","locations":[{"end":270,"start":16}],"match_end":270,"match_start":16,"name":"Aldo_ket_red"},{"dbname":"CDD","description":"AKR_AKR3C2-3","id":"cd19120","interpro_description":"Aldo-keto reductase family 3C2/3","interpro_id":"IPR044494","interpro_name":"AKR3C2/3","locations":[{"end":276,"start":7}],"match_end":276,"match_start":7,"name":"AKR_AKR3C2-3"},{"dbname":"PROSITE_PATTERNS","description":"Aldo/keto reductase family signature 1.","id":"PS00798","interpro_description":"Aldo/keto reductase, conserved site","interpro_id":"IPR018170","interpro_name":"Aldo/ket_reductase_CS","locations":[{"end":62,"start":45}],"match_end":62,"match_start":45,"name":"ALDOKETO_REDUCTASE_1"},{"dbname":"PRINTS","description":"Aldo-keto reductase signature","id":"PR00069","interpro_description":"Aldo-keto reductase","interpro_id":"IPR020471","interpro_name":"AKR","locations":[{"end":65,"start":41},{"end":112,"start":94},{"end":146,"start":129},{"end":194,"start":165},{"end":230,"start":206}],"match_end":230,"match_start":41,"name":"ALDKETRDTASE"},{"dbname":"SUPERFAMILY","id":"SSF51430","interpro_description":"NADP-dependent oxidoreductase domain superfamily","interpro_id":"IPR036812","interpro_name":"NADP_OxRdtase_dom_sf","locations":[{"end":276,"start":10}],"match_end":276,"match_start":10,"name":"NAD(P)-linked oxidoreductase"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.100","interpro_description":"NADP-dependent oxidoreductase domain superfamily","interpro_id":"IPR036812","interpro_name":"NADP_OxRdtase_dom_sf","locations":[{"end":286,"start":4}],"match_end":286,"match_start":4},{"dbname":"PANTHER","id":"PTHR43827","interpro_description":"Aldo-keto reductase","interpro_id":"IPR020471","interpro_name":"AKR","locations":[{"end":275,"start":12}],"match_end":275,"match_start":12,"name":"2,5-DIKETO-D-GLUCONIC ACID REDUCTASE"},{"dbname":"PIRSF","id":"PIRSF000097","interpro_description":"Aldo-keto reductase","interpro_id":"IPR020471","interpro_name":"AKR","locations":[{"end":286,"start":9}],"match_end":286,"match_start":9,"name":"AKR"}],"location":{"chromosome_name":"supercont5.3","end_pos":2518163,"start_pos":2517303,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01869","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01869","ortholog_taxonid":4932,"ortholog_uniquename":"YDL124W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01869","ortholog_taxonid":4932,"ortholog_uniquename":"YDL124W","reference_uniquename":"PMID:26896847"}],"product":"mycotoxin detoxification NADH/NADPH-dependent acetaldehyde reductase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0047019","GO:0051269","GO:0016652","GO:0047018","GO:0004032","GO:0051268"]}},"subset_termids":["GO:0005634","GO:0019748","GO:0098754","GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004032":null,"GO:0005634":null,"GO:0005829":null,"GO:0016652":null,"GO:0043387":null,"GO:0047018":null,"GO:0047019":null,"GO:0051268":null,"GO:0051269":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01869.1"],"transcripts_by_uniquename":{"SJAG_01869.1":null},"uniprot_identifier":"B6JZ45","uniquename":"SJAG_01869"}


id: SJAG_01870
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111013],"is_not":false,"summary":null,"term":"GO:0000395"},{"annotations":[65479],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[77075],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[111002],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111004],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[77074],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[77072],"is_not":false,"summary":null,"term":"GO:0034719"},{"annotations":[77069],"is_not":false,"summary":null,"term":"GO:0005685"},{"annotations":[77070],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[77073],"is_not":false,"summary":null,"term":"GO:0071004"},{"annotations":[77071],"is_not":false,"summary":null,"term":"GO:0005687"},{"annotations":[111011],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[77068],"is_not":false,"summary":null,"term":"GO:0005682"}],"molecular_function":[{"annotations":[77066],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01870","GOA:B6JZ46","EnsemblGenomes-Tr:EEB06814","InterPro:IPR010920","InterPro:IPR034098","UniProtKB/TrEMBL:B6JZ46","InterPro:IPR001163"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dlp1","uniquename":"SJAG_01865"},{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"}],"genes_by_uniquename":{"HGNC:11163":null,"HGNC:49371":null,"SJAG_01870":null,"SPBC4B4.05":null,"YFL017W-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LSM domain","id":"PF01423","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":71,"start":8}],"match_end":71,"match_start":8,"name":"LSM"},{"dbname":"CDD","description":"Sm_G","id":"cd01719","interpro_description":"Small nuclear ribonucleoprotein G","interpro_id":"IPR034098","interpro_name":"Sm_G","locations":[{"end":74,"start":5}],"match_end":74,"match_start":5,"name":"Sm_G"},{"dbname":"PROSITE_PROFILES","description":"Sm domain profile.","id":"PS52002","interpro_description":"Sm domain","interpro_id":"IPR047575","interpro_name":"Sm","locations":[{"end":76,"start":4}],"match_end":76,"match_start":4,"name":"SM"},{"dbname":"SMART","id":"SM00651","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":72,"start":7}],"match_end":72,"match_start":7,"name":"Sm3"},{"dbname":"FUNFAM","description":"Small nuclear ribonucleoprotein G","id":"G3DSA:2.30.30.100:FF:000023","locations":[{"end":76,"start":1}],"match_end":76,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50182","interpro_description":"LSM domain superfamily","interpro_id":"IPR010920","interpro_name":"LSM_dom_sf","locations":[{"end":75,"start":7}],"match_end":75,"match_start":7,"name":"Sm-like ribonucleoproteins"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.100","locations":[{"end":77,"start":1}],"match_end":77,"match_start":1},{"dbname":"PANTHER","id":"PTHR10553","interpro_description":"Sm-like protein Lsm7/SmG","interpro_id":"IPR044641","interpro_name":"Lsm7/SmG-like","locations":[{"end":76,"start":1}],"match_end":76,"match_start":1,"name":"SMALL NUCLEAR RIBONUCLEOPROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":2519116,"start_pos":2518702,"strand":"reverse"},"name":"smg1","ortholog_annotations":[{"gene_uniquename":"SJAG_01870","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11163","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01870","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:49371","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01870","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC4B4.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01870","ortholog_taxonid":4932,"ortholog_uniquename":"YFL017W-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01870","ortholog_taxonid":4932,"ortholog_uniquename":"YFL017W-A","reference_uniquename":"PMID:26896847"}],"product":"Sm snRNP core protein Smg1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0065003","GO:0016071","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0000395":null,"GO:0003723":null,"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005829":null,"GO:0034719":null,"GO:0046540":null,"GO:0071004":null,"GO:0071011":null,"GO:0071013":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01870.1"],"transcripts_by_uniquename":{"SJAG_01870.1":null},"uniprot_identifier":"B6JZ46","uniquename":"SJAG_01870"}


id: SJAG_01871
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6JZ47","EnsemblGenomes-Gn:SJAG_01871","EnsemblGenomes-Tr:EEB06815"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"coq9","uniquename":"SJAG_01866"},{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"}],"genes_by_uniquename":{"SJAG_01871":null,"SPCC830.04c":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.3","end_pos":2520090,"start_pos":2519398,"strand":"reverse"},"name":"mug128","ortholog_annotations":[{"gene_uniquename":"SJAG_01871","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC830.04c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"PMID:21511999":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01871.1"],"transcripts_by_uniquename":{"SJAG_01871.1":null},"uniprot_identifier":"B6JZ47","uniquename":"SJAG_01871"}


id: SJAG_01872
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72925],"is_not":false,"summary":null,"term":"GO:0006843"}],"cellular_component":[{"annotations":[60273],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[72924],"is_not":false,"summary":null,"term":"GO:0071913"}],"mondo":[{"annotations":[85514],"is_not":false,"summary":null,"term":"MONDO:0014072"},{"annotations":[86638],"is_not":false,"summary":null,"term":"MONDO:0032596"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06816","InterPro:IPR002067","GOA:B6JZ48","EnsemblGenomes-Gn:SJAG_01872","InterPro:IPR018108","InterPro:IPR023395","UniProtKB/TrEMBL:B6JZ48"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erh1","uniquename":"SJAG_01867"},{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"}],"genes_by_uniquename":{"HGNC:10979":null,"SJAG_01872":null,"SPAC19G12.05":null,"YBR291C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial carrier protein","id":"PF00153","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":86,"start":11},{"end":191,"start":100},{"end":285,"start":200}],"match_end":285,"match_start":11,"name":"Mito_carr"},{"dbname":"PROSITE_PROFILES","description":"Solute carrier (Solcar) repeat profile.","id":"PS50920","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":88,"start":10},{"end":187,"start":99},{"end":284,"start":198}],"match_end":284,"match_start":10,"name":"SOLCAR"},{"dbname":"PRINTS","description":"Mitochondrial carrier protein signature","id":"PR00926","interpro_description":"Mitochondrial carrier protein","interpro_id":"IPR002067","interpro_name":"Mit_carrier","locations":[{"end":42,"start":15},{"end":130,"start":112},{"end":178,"start":160},{"end":229,"start":207}],"match_end":229,"match_start":15,"name":"MITOCARRIER"},{"dbname":"SUPERFAMILY","id":"SSF103506","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":280,"start":11}],"match_end":280,"match_start":11,"name":"Mitochondrial carrier"},{"dbname":"GENE3D","id":"G3DSA:1.50.40.10","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":285,"start":1}],"match_end":285,"match_start":1,"name":"Mitochondrial carrier domain"},{"dbname":"PANTHER","id":"PTHR45788","interpro_description":"Tricarboxylate transport protein-like","interpro_id":"IPR049563","interpro_name":"TXTP-like","locations":[{"end":284,"start":9}],"match_end":284,"match_start":9,"name":"SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2521528,"start_pos":2520671,"strand":"forward"},"name":"mce1","ortholog_annotations":[{"gene_uniquename":"SJAG_01872","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10979","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01872","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01872","ortholog_taxonid":4932,"ortholog_uniquename":"YBR291C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01872","ortholog_taxonid":4932,"ortholog_uniquename":"YBR291C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial carrier, citrate","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0071913"]}},"subset_termids":["GO:0005739","GO:0022857","GO:0055085","MONDO:0002320","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0006843":null,"GO:0071913":null,"MONDO:0014072":null,"MONDO:0032596":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01872.1"],"transcripts_by_uniquename":{"SJAG_01872.1":null},"uniprot_identifier":"B6JZ48","uniquename":"SJAG_01872"}


id: SJAG_01873
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92148],"is_not":false,"summary":null,"term":"GO:0006302"},{"annotations":[73553],"is_not":false,"summary":null,"term":"GO:0031507"},{"annotations":[92150],"is_not":false,"summary":null,"term":"GO:0045143"},{"annotations":[92151],"is_not":false,"summary":null,"term":"GO:0007076"},{"annotations":[92153],"is_not":false,"summary":null,"term":"GO:0007095"}],"cellular_component":[{"annotations":[92142],"is_not":false,"summary":null,"term":"GO:0099115"},{"annotations":[92143],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[73552],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[73550],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[92146],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[92147],"is_not":false,"summary":null,"term":"GO:0033553"}],"molecular_function":[{"annotations":[92154],"is_not":false,"summary":null,"term":"GO:0140463"},{"annotations":[61011],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[73551],"is_not":false,"summary":null,"term":"GO:0030527"}]},"dbxrefs":["InterPro:IPR032454","EnsemblGenomes-Gn:SJAG_01873","InterPro:IPR032458","InterPro:IPR007125","EnsemblGenomes-Tr:EEB06817","InterPro:IPR009072","UniProtKB/TrEMBL:B6JZ49","GOA:B6JZ49","InterPro:IPR002119"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","flags":["is_histone"],"gene_neighbourhood":[{"name":"cpy1","uniquename":"SJAG_01868"},{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"}],"genes_by_uniquename":{"HGNC:13671":null,"HGNC:14455":null,"HGNC:14456":null,"HGNC:18298":null,"HGNC:18729":null,"HGNC:20507":null,"HGNC:20508":null,"HGNC:22516":null,"HGNC:4724":null,"HGNC:4725":null,"HGNC:4726":null,"HGNC:4727":null,"HGNC:4730":null,"HGNC:4733":null,"HGNC:4734":null,"HGNC:4735":null,"HGNC:4737":null,"HGNC:4739":null,"SJAG_01873":null,"SPAC19G12.06c":null,"YBL003C":null,"YDR225W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"C-terminus of histone H2A","id":"PF16211","interpro_description":"Histone H2A, C-terminal domain","interpro_id":"IPR032454","interpro_name":"Histone_H2A_C","locations":[{"end":126,"start":93}],"match_end":126,"match_start":93,"name":"Histone_H2A_C"},{"dbname":"PFAM","description":"Core histone H2A/H2B/H3/H4","id":"PF00125","interpro_description":"Histone H2A/H2B/H3","interpro_id":"IPR007125","interpro_name":"Histone_H2A/H2B/H3","locations":[{"end":90,"start":14}],"match_end":90,"match_start":14,"name":"Histone"},{"dbname":"CDD","description":"HFD_H2A","id":"cd00074","interpro_description":"Histone H2A","interpro_id":"IPR002119","interpro_name":"Histone_H2A","locations":[{"end":105,"start":17}],"match_end":105,"match_start":17,"name":"HFD_H2A"},{"dbname":"PROSITE_PATTERNS","description":"Histone H2A signature.","id":"PS00046","interpro_description":"Histone H2A conserved site","interpro_id":"IPR032458","interpro_name":"Histone_H2A_CS","locations":[{"end":29,"start":23}],"match_end":29,"match_start":23,"name":"HISTONE_H2A"},{"dbname":"SMART","id":"SM00414","interpro_description":"Histone H2A","interpro_id":"IPR002119","interpro_name":"Histone_H2A","locations":[{"end":124,"start":4}],"match_end":124,"match_start":4,"name":"h2a4"},{"dbname":"PRINTS","description":"Histone H2A signature","id":"PR00620","interpro_description":"Histone H2A","interpro_id":"IPR002119","interpro_name":"Histone_H2A","locations":[{"end":37,"start":15},{"end":87,"start":44},{"end":119,"start":101}],"match_end":119,"match_start":15,"name":"HISTONEH2A"},{"dbname":"FUNFAM","description":"Histone H2A","id":"G3DSA:1.10.20.10:FF:000008","locations":[{"end":130,"start":2}],"match_end":130,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":120,"start":17}],"match_end":120,"match_start":17,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":131,"start":2}],"match_end":131,"match_start":2,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR23430","interpro_description":"Histone H2A","interpro_id":"IPR002119","interpro_name":"Histone_H2A","locations":[{"end":120,"start":8}],"match_end":120,"match_start":8,"name":"HISTONE H2A"}],"location":{"chromosome_name":"supercont5.3","end_pos":2522330,"start_pos":2521935,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":17,"start":1}},{"range":{"end":67,"start":50}}],"name":"hta2","ortholog_annotations":[{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13671","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14455","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14456","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18298","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18729","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20507","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20508","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:22516","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4724","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4725","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4726","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4727","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4730","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4733","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4734","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4735","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4737","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4739","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":4932,"ortholog_uniquename":"YBL003C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":4932,"ortholog_uniquename":"YBL003C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":4932,"ortholog_uniquename":"YDR225W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01873","ortholog_taxonid":4932,"ortholog_uniquename":"YDR225W","reference_uniquename":"PMID:26896847"}],"product":"histone H2A beta","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677"],"not-binding":["GO:0140463","GO:0030527"]}},"subset_termids":["GO:0060090","GO:0005198","GO:0005634","GO:0023052","GO:0006281","GO:0140013","GO:0006325","GO:0005694","GO:0000070","GO:0044772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000786":null,"GO:0003677":null,"GO:0005634":null,"GO:0005721":null,"GO:0006302":null,"GO:0007076":null,"GO:0007095":null,"GO:0030527":null,"GO:0031507":null,"GO:0031934":null,"GO:0033553":null,"GO:0045143":null,"GO:0099115":null,"GO:0140463":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01873.1"],"transcripts_by_uniquename":{"SJAG_01873.1":null},"uniprot_identifier":"B6JZ49","uniquename":"SJAG_01873"}


id: SJAG_01874
data:
  {"coiled_coil_coords":[{"range":{"end":282,"start":262}},{"range":{"end":542,"start":522}}],"cv_annotations":{"biological_process":[{"annotations":[76337],"is_not":false,"summary":null,"term":"GO:0042026"}],"cellular_component":[{"annotations":[76334],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76332],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[76335],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[64570],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[76338],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[64571],"is_not":false,"summary":null,"term":"GO:0140662"},{"annotations":[76336],"is_not":false,"summary":null,"term":"GO:0031072"}]},"dbxrefs":["InterPro:IPR018181","EnsemblGenomes-Tr:EEB06818","GOA:B6JZ50","UniProtKB/TrEMBL:B6JZ50","EnsemblGenomes-Gn:SJAG_01874","InterPro:IPR013126","InterPro:IPR029047","InterPro:IPR029048"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01869"},{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"}],"genes_by_uniquename":{"SJAG_01874":null,"YNL209W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Hsp70 protein","id":"PF00012","interpro_description":"Heat shock protein 70 family","interpro_id":"IPR013126","interpro_name":"Hsp_70_fam","locations":[{"end":612,"start":8}],"match_end":612,"match_start":8,"name":"HSP70"},{"dbname":"PROSITE_PATTERNS","description":"Heat shock hsp70 proteins family signature 1.","id":"PS00297","interpro_description":"Heat shock protein 70, conserved site","interpro_id":"IPR018181","interpro_name":"Heat_shock_70_CS","locations":[{"end":18,"start":11}],"match_end":18,"match_start":11,"name":"HSP70_1"},{"dbname":"PROSITE_PATTERNS","description":"Heat shock hsp70 proteins family signature 3.","id":"PS01036","interpro_description":"Heat shock protein 70, conserved site","interpro_id":"IPR018181","interpro_name":"Heat_shock_70_CS","locations":[{"end":350,"start":336}],"match_end":350,"match_start":336,"name":"HSP70_3"},{"dbname":"PROSITE_PATTERNS","description":"Heat shock hsp70 proteins family signature 2.","id":"PS00329","interpro_description":"Heat shock protein 70, conserved site","interpro_id":"IPR018181","interpro_name":"Heat_shock_70_CS","locations":[{"end":212,"start":199}],"match_end":212,"match_start":199,"name":"HSP70_2"},{"dbname":"PRINTS","description":"70kDa heat shock protein signature","id":"PR00301","locations":[{"end":20,"start":7},{"end":47,"start":35},{"end":65,"start":57},{"end":164,"start":144},{"end":215,"start":205},{"end":349,"start":333},{"end":385,"start":365},{"end":412,"start":393},{"end":490,"start":474}],"match_end":490,"match_start":7,"name":"HEATSHOCK70"},{"dbname":"FUNFAM","description":"Heat shock protein 70","id":"G3DSA:3.30.420.40:FF:000026","locations":[{"end":198,"start":9}],"match_end":198,"match_start":9},{"dbname":"FUNFAM","description":"Heat shock 70 kDa","id":"G3DSA:3.90.640.10:FF:000002","locations":[{"end":314,"start":231}],"match_end":314,"match_start":231},{"dbname":"FUNFAM","description":"Heat shock 70 kDa protein","id":"G3DSA:3.30.420.40:FF:000172","locations":[{"end":362,"start":298}],"match_end":362,"match_start":298},{"dbname":"FUNFAM","description":"Heat shock protein SSB1","id":"G3DSA:2.60.34.10:FF:000004","locations":[{"end":511,"start":380}],"match_end":511,"match_start":380},{"dbname":"FUNFAM","description":"Heat shock protein ssb1","id":"G3DSA:3.30.30.30:FF:000005","locations":[{"end":124,"start":70}],"match_end":124,"match_start":70},{"dbname":"SUPERFAMILY","id":"SSF100920","interpro_description":"Heat shock protein 70kD, peptide-binding domain superfamily","interpro_id":"IPR029047","interpro_name":"HSP70_peptide-bd_sf","locations":[{"end":546,"start":390}],"match_end":546,"match_start":390,"name":"Heat shock protein 70kD (HSP70), peptide-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF100934","interpro_description":"Heat shock protein 70kD, C-terminal domain superfamily","interpro_id":"IPR029048","interpro_name":"HSP70_C_sf","locations":[{"end":597,"start":540}],"match_end":597,"match_start":540,"name":"Heat shock protein 70kD (HSP70), C-terminal subdomain"},{"dbname":"SUPERFAMILY","id":"SSF53067","interpro_description":"ATPase, nucleotide binding domain","interpro_id":"IPR043129","interpro_name":"ATPase_NBD","locations":[{"end":188,"start":8},{"end":383,"start":192}],"match_end":383,"match_start":8,"name":"Actin-like ATPase domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.1270.10","interpro_description":"Heat shock protein 70kD, C-terminal domain superfamily","interpro_id":"IPR029048","interpro_name":"HSP70_C_sf","locations":[{"end":612,"start":514}],"match_end":612,"match_start":514},{"dbname":"GENE3D","id":"G3DSA:2.60.34.10","interpro_description":"Heat shock protein 70kD, peptide-binding domain superfamily","interpro_id":"IPR029047","interpro_name":"HSP70_peptide-bd_sf","locations":[{"end":511,"start":379}],"match_end":511,"match_start":379,"name":"Substrate Binding Domain Of DNAk; Chain A, domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.90.640.10","locations":[{"end":314,"start":232}],"match_end":314,"match_start":232,"name":"Actin; Chain A, domain 4"},{"dbname":"GENE3D","id":"G3DSA:3.30.30.30","locations":[{"end":124,"start":70}],"match_end":124,"match_start":70},{"dbname":"GENE3D","id":"G3DSA:3.30.420.40","locations":[{"end":69,"start":9},{"end":231,"start":125},{"end":378,"start":315}],"match_end":378,"match_start":9},{"dbname":"PANTHER","id":"PTHR19375","interpro_description":"Heat shock protein 70 family","interpro_id":"IPR013126","interpro_name":"Hsp_70_fam","locations":[{"end":578,"start":8}],"match_end":578,"match_start":8,"name":"HEAT SHOCK PROTEIN 70KDA"},{"dbname":"COILS","id":"Coil","locations":[{"end":282,"start":262},{"end":542,"start":522}],"match_end":542,"match_start":262,"name":"Coil"},{"dbname":"NCBIFAM","description":"molecular chaperone DnaK","id":"NF001413","locations":[{"end":610,"start":8}],"match_end":610,"match_start":8,"name":"PRK00290.1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2525302,"start_pos":2523461,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":380,"start":369}},{"range":{"end":403,"start":392}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01874","ortholog_taxonid":4932,"ortholog_uniquename":"YNL209W","reference_uniquename":"PMID:26896847"}],"product":"heat shock protein, Hsp70 family, Ssb2-like","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0031072"],"not-binding":["GO:0016887","GO:0140662"]}},"subset_termids":["GO:0006457","GO:0051604","GO:0005886","GO:0005634","GO:0016887","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0005886":null,"GO:0016887":null,"GO:0031072":null,"GO:0042026":null,"GO:0140662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01874.1"],"transcripts_by_uniquename":{"SJAG_01874.1":null},"uniprot_identifier":"B6JZ50","uniquename":"SJAG_01874"}


id: SJAG_01875
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[97134],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[79299],"is_not":false,"summary":null,"term":"GO:0004427"},{"annotations":[68339],"is_not":false,"summary":null,"term":"GO:0000287"}],"mondo":[{"annotations":[87343],"is_not":false,"summary":null,"term":"MONDO:0014974"},{"annotations":[87346],"is_not":false,"summary":null,"term":"MONDO:0014973"}]},"dbxrefs":["GOA:B6JZ51","EnsemblGenomes-Gn:SJAG_01875","UniProtKB/TrEMBL:B6JZ51","InterPro:IPR036649","InterPro:IPR008162","EnsemblGenomes-Tr:EEB06819"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"smg1","uniquename":"SJAG_01870"},{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"}],"genes_by_uniquename":{"HGNC:28883":null,"HGNC:9226":null,"SJAG_01875":null,"SPAC3A12.02":null,"YMR267W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Inorganic pyrophosphatase","id":"PF00719","interpro_description":"Inorganic pyrophosphatase","interpro_id":"IPR008162","interpro_name":"Pyrophosphatase","locations":[{"end":234,"start":52}],"match_end":234,"match_start":52,"name":"Pyrophosphatase"},{"dbname":"CDD","description":"pyrophosphatase","id":"cd00412","interpro_description":"Inorganic pyrophosphatase","interpro_id":"IPR008162","interpro_name":"Pyrophosphatase","locations":[{"end":231,"start":49}],"match_end":231,"match_start":49,"name":"pyrophosphatase"},{"dbname":"PROSITE_PATTERNS","description":"Inorganic pyrophosphatase signature.","id":"PS00387","locations":[{"end":128,"start":122}],"match_end":128,"match_start":122,"name":"PPASE"},{"dbname":"FUNFAM","description":"Inorganic pyrophosphatase, mitochondrial","id":"G3DSA:3.90.80.10:FF:000007","locations":[{"end":251,"start":10}],"match_end":251,"match_start":10},{"dbname":"SUPERFAMILY","id":"SSF50324","interpro_description":"Inorganic pyrophosphatase superfamily","interpro_id":"IPR036649","interpro_name":"Pyrophosphatase_sf","locations":[{"end":240,"start":11}],"match_end":240,"match_start":11,"name":"Inorganic pyrophosphatase"},{"dbname":"GENE3D","id":"G3DSA:3.90.80.10","interpro_description":"Inorganic pyrophosphatase superfamily","interpro_id":"IPR036649","interpro_name":"Pyrophosphatase_sf","locations":[{"end":273,"start":9}],"match_end":273,"match_start":9,"name":"Inorganic pyrophosphatase"},{"dbname":"PANTHER","id":"PTHR10286","interpro_description":"Inorganic pyrophosphatase","interpro_id":"IPR008162","interpro_name":"Pyrophosphatase","locations":[{"end":243,"start":8}],"match_end":243,"match_start":8,"name":"INORGANIC PYROPHOSPHATASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":2526479,"start_pos":2525507,"strand":"reverse"},"name":"ceo2","ortholog_annotations":[{"gene_uniquename":"SJAG_01875","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28883","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01875","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9226","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01875","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A12.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01875","ortholog_taxonid":4932,"ortholog_uniquename":"YMR267W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01875","ortholog_taxonid":4932,"ortholog_uniquename":"YMR267W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial inorganic diphosphatase, implicated in energy generation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287"],"not-binding":["GO:0004427"]}},"subset_termids":["GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0004427":null,"GO:0005739":null,"MONDO:0014973":null,"MONDO:0014974":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01875.1"],"transcripts_by_uniquename":{"SJAG_01875.1":null},"uniprot_identifier":"B6JZ51","uniquename":"SJAG_01875"}


id: SJAG_01876
data:
  {"coiled_coil_coords":[{"range":{"end":229,"start":181}}],"cv_annotations":{"biological_process":[{"annotations":[77153],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[77151],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[77154],"is_not":false,"summary":null,"term":"GO:0000423"},{"annotations":[92993],"is_not":false,"summary":null,"term":"GO:0006661"}],"cellular_component":[{"annotations":[92984],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[92986],"is_not":false,"summary":null,"term":"GO:0034045"},{"annotations":[77155],"is_not":false,"summary":null,"term":"GO:0034271"},{"annotations":[77156],"is_not":false,"summary":null,"term":"GO:0034272"}],"molecular_function":[{"annotations":[77149],"is_not":false,"summary":null,"term":"GO:0043548"},{"annotations":[77152],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06820","InterPro:IPR041691","UniProtKB/TrEMBL:B6JZ52","InterPro:IPR040455","InterPro:IPR038274","InterPro:IPR007243","EnsemblGenomes-Gn:SJAG_01876","GOA:B6JZ52"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":64,"start":41}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug128","uniquename":"SJAG_01871"},{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"}],"genes_by_uniquename":{"HGNC:1034":null,"SJAG_01876":null,"SPAC20G8.10c":null,"YPL120W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Apg6 BARA domain","id":"PF04111","interpro_description":"Atg6, BARA domain","interpro_id":"IPR040455","interpro_name":"Atg6_BARA","locations":[{"end":452,"start":268}],"match_end":452,"match_start":268,"name":"APG6"},{"dbname":"PFAM","description":"Apg6 coiled-coil region","id":"PF17675","interpro_description":"Atg6/beclin, coiled-coil domain","interpro_id":"IPR041691","interpro_name":"Atg6/beclin_CC","locations":[{"end":263,"start":137}],"match_end":263,"match_start":137,"name":"APG6_N"},{"dbname":"GENE3D","id":"G3DSA:1.10.418.40","interpro_description":"Atg6/Beclin C-terminal domain superfamily","interpro_id":"IPR038274","interpro_name":"Atg6/Beclin_C_sf","locations":[{"end":456,"start":245}],"match_end":456,"match_start":245,"name":"Autophagy protein 6/Beclin 1"},{"dbname":"PANTHER","id":"PTHR12768","interpro_description":"Atg6/Beclin","interpro_id":"IPR007243","interpro_name":"Atg6/Beclin","locations":[{"end":455,"start":6}],"match_end":455,"match_start":6,"name":"BECLIN 1"},{"dbname":"COILS","id":"Coil","locations":[{"end":229,"start":181}],"match_end":229,"match_start":181,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":64,"start":41}],"match_end":64,"match_start":41,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2528470,"start_pos":2527001,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":228,"start":207}}],"name":"atg6","ortholog_annotations":[{"gene_uniquename":"SJAG_01876","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1034","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01876","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC20G8.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01876","ortholog_taxonid":4932,"ortholog_uniquename":"YPL120W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01876","ortholog_taxonid":4932,"ortholog_uniquename":"YPL120W","reference_uniquename":"PMID:26896847"}],"product":"autophagy associated beclin family protein Atg6","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043548"],"not-binding":["GO:0030674"]}},"subset_termids":["GO:0000407","GO:0005768","GO:0006629","GO:0060090","GO:0006914","GO:0031410","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000045":null,"GO:0000423":null,"GO:0005768":null,"GO:0006661":null,"GO:0030674":null,"GO:0034045":null,"GO:0034271":null,"GO:0034272":null,"GO:0043548":null,"GO:0045324":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01876.1"],"transcripts_by_uniquename":{"SJAG_01876.1":null},"uniprot_identifier":"B6JZ52","uniquename":"SJAG_01876"}


id: SJAG_01877
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":294,"start":285}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":464,"start":464}},{"assigned_by":"UniProtKB","ligand":"acetyl-CoA","range":{"end":627,"start":625}},{"assigned_by":"UniProtKB","ligand":"acetyl-CoA","range":{"end":638,"start":632}},{"assigned_by":"UniProtKB","ligand":"acetyl-CoA","range":{"end":726,"start":726}}],"coiled_coil_coords":[{"range":{"end":921,"start":901}},{"range":{"end":964,"start":944}}],"cv_annotations":{"biological_process":[{"annotations":[72732],"is_not":false,"summary":null,"term":"GO:1904812"},{"annotations":[72734],"is_not":false,"summary":null,"term":"GO:0051391"},{"annotations":[72731],"is_not":false,"summary":null,"term":"GO:0002101"}],"cellular_component":[{"annotations":[92973],"is_not":false,"summary":null,"term":"GO:0030686"},{"annotations":[72729],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[72730],"is_not":false,"summary":null,"term":"GO:1990883"},{"annotations":[60040],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[72728],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[72733],"is_not":false,"summary":null,"term":"GO:0051392"}]},"dbxrefs":["InterPro:IPR007807","InterPro:IPR013562","EnsemblGenomes-Tr:EEB06821","InterPro:IPR033688","EnsemblGenomes-Gn:SJAG_01877","GOA:B6JZ53","UniProtKB/TrEMBL:B6JZ53","InterPro:IPR000182","InterPro:IPR027417","InterPro:IPR032672","InterPro:IPR027992"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1034,"start":982}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mce1","uniquename":"SJAG_01872"},{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"}],"genes_by_uniquename":{"HGNC:29830":null,"SJAG_01877":null,"SPAC20G8.09c":null,"YNL132W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GNAT acetyltransferase 2","id":"PF13718","interpro_description":"GNAT domain","interpro_id":"IPR000182","interpro_name":"GNAT_dom","locations":[{"end":754,"start":524}],"match_end":754,"match_start":524,"name":"GNAT_acetyltr_2"},{"dbname":"PFAM","description":"Helicase","id":"PF05127","interpro_description":"RNA cytidine acetyltransferase NAT10/TcmA, helicase domain","interpro_id":"IPR007807","interpro_name":"NAT10/TcmA_helicase","locations":[{"end":482,"start":280}],"match_end":482,"match_start":280,"name":"Helicase_RecD"},{"dbname":"PFAM","description":"tRNA(Met) cytidine acetyltransferase TmcA, N-terminal","id":"PF08351","interpro_description":"tRNA(Met) cytidine acetyltransferase TmcA, N-terminal","interpro_id":"IPR013562","interpro_name":"TmcA_N","locations":[{"end":202,"start":9}],"match_end":202,"match_start":9,"name":"TmcA_N"},{"dbname":"PFAM","description":"Possible tRNA binding domain","id":"PF13725","interpro_description":"Possible tRNA binding domain","interpro_id":"IPR027992","interpro_name":"tRNA_bind_dom","locations":[{"end":987,"start":760}],"match_end":987,"match_start":760,"name":"tRNA_bind_2"},{"dbname":"FUNFAM","description":"RNA cytidine acetyltransferase","id":"G3DSA:3.40.50.11040:FF:000002","locations":[{"end":241,"start":9}],"match_end":241,"match_start":9},{"dbname":"FUNFAM","description":"tRNA(Met) cytidine acetyltransferase TmcA","id":"G3DSA:3.40.50.300:FF:002218","locations":[{"end":472,"start":276}],"match_end":472,"match_start":276},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":401,"start":201}],"match_end":401,"match_start":201,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":324,"start":275},{"end":472,"start":363}],"match_end":472,"match_start":275},{"dbname":"GENE3D","id":"G3DSA:3.40.630.30","locations":[{"end":650,"start":475},{"end":751,"start":707}],"match_end":751,"match_start":475},{"dbname":"GENE3D","id":"G3DSA:3.40.50.11040","locations":[{"end":236,"start":10}],"match_end":236,"match_start":10},{"dbname":"PANTHER","id":"PTHR10925","interpro_description":"TmcA/NAT10/Kre33","interpro_id":"IPR032672","interpro_name":"TmcA/NAT10/Kre33","locations":[{"end":1022,"start":2}],"match_end":1022,"match_start":2,"name":"N-ACETYLTRANSFERASE 10"},{"dbname":"COILS","id":"Coil","locations":[{"end":921,"start":901},{"end":964,"start":944}],"match_end":964,"match_start":901,"name":"Coil"},{"dbname":"HAMAP","description":"RNA cytidine acetyltransferase [NAT10].","id":"MF_03211","interpro_description":"RNA cytidine acetyltransferase NAT10","interpro_id":"IPR033688","interpro_name":"NAT10","locations":[{"end":1013,"start":2}],"match_end":1013,"match_start":2,"name":"RNA_acetyltr_Nat10"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1034,"start":982}],"match_end":1034,"match_start":982,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":1023,"start":1004}],"match_end":1023,"match_start":1004,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":1034,"start":1024}],"match_end":1034,"match_start":1024,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2531945,"start_pos":2528759,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":85,"start":69}},{"range":{"end":298,"start":289}},{"range":{"end":433,"start":418}},{"range":{"end":957,"start":942}},{"range":{"end":1033,"start":1016}}],"name":"nat10","ortholog_annotations":[{"gene_uniquename":"SJAG_01877","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29830","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01877","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC20G8.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01877","ortholog_taxonid":4932,"ortholog_uniquename":"YNL132W","reference_uniquename":"PMID:29761456"}],"product":"rRNA/tRNA cytidine N-acetyltransferase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0000049"],"not-binding":["GO:1990883","GO:0051392"]}},"subset_termids":["GO:0042254","GO:0016746","GO:0005634","GO:0006399","GO:0030684","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0002101":null,"GO:0005524":null,"GO:0005730":null,"GO:0030686":null,"GO:0051391":null,"GO:0051392":null,"GO:1904812":null,"GO:1990883":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01877.1"],"transcripts_by_uniquename":{"SJAG_01877.1":null},"uniprot_identifier":"B6JZ53","uniquename":"SJAG_01877"}


id: SJAG_01878
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73335],"is_not":false,"summary":null,"term":"GO:0000729"},{"annotations":[92967],"is_not":false,"summary":null,"term":"GO:0031507"},{"annotations":[73330],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[73329],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[73331],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[60758],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[73333],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[73332],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[73334],"is_not":false,"summary":null,"term":"GO:0140750"}],"mondo":[{"annotations":[87573],"is_not":false,"summary":null,"term":"MONDO:0007507"},{"annotations":[86835],"is_not":false,"summary":null,"term":"MONDO:0007619"},{"annotations":[87094],"is_not":false,"summary":null,"term":"MONDO:0008416"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06822","GOA:B6JZ54","InterPro:IPR027417","InterPro:IPR001650","EnsemblGenomes-Gn:SJAG_01878","InterPro:IPR038718","UniProtKB/TrEMBL:B6JZ54","InterPro:IPR000330","InterPro:IPR014001"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":250,"start":181}},{"range":{"end":316,"start":297}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hta2","uniquename":"SJAG_01873"},{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"}],"genes_by_uniquename":{"HGNC:18398":null,"SJAG_01878":null,"SPAC20G8.08c":null,"YAL019W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Helicase conserved C-terminal domain","id":"PF00271","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":856,"start":745}],"match_end":856,"match_start":745,"name":"Helicase_C"},{"dbname":"PFAM","description":"SNF2-related domain","id":"PF00176","interpro_description":"SNF2, N-terminal","interpro_id":"IPR000330","interpro_name":"SNF2_N","locations":[{"end":675,"start":396}],"match_end":675,"match_start":396,"name":"SNF2-rel_dom"},{"dbname":"CDD","description":"SF2_C_SNF","id":"cd18793","interpro_description":"SNF2/RAD5-like, C-terminal helicase domain","interpro_id":"IPR049730","interpro_name":"SNF2/RAD54-like_C","locations":[{"end":867,"start":744}],"match_end":867,"match_start":744,"name":"SF2_C_SNF"},{"dbname":"CDD","description":"DEXHc_SMARCAD1","id":"cd17998","locations":[{"end":573,"start":393}],"match_end":573,"match_start":393,"name":"DEXHc_SMARCAD1"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.","id":"PS51192","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":571,"start":405}],"match_end":571,"match_start":405,"name":"HELICASE_ATP_BIND_1"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase C-terminal domain profile.","id":"PS51194","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":898,"start":748}],"match_end":898,"match_start":748,"name":"HELICASE_CTER"},{"dbname":"SMART","id":"SM00487","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":583,"start":389}],"match_end":583,"match_start":389,"name":"ultradead3"},{"dbname":"SMART","id":"SM00490","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":856,"start":773}],"match_end":856,"match_start":773,"name":"helicmild6"},{"dbname":"FUNFAM","description":"SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1","id":"G3DSA:3.40.50.10810:FF:000014","locations":[{"end":643,"start":364}],"match_end":643,"match_start":364},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":618,"start":365},{"end":688,"start":620},{"end":902,"start":736}],"match_end":902,"match_start":365,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":912,"start":735}],"match_end":912,"match_start":735},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10810","interpro_description":"SNF2-like, N-terminal domain superfamily","interpro_id":"IPR038718","interpro_name":"SNF2-like_sf","locations":[{"end":644,"start":361}],"match_end":644,"match_start":361},{"dbname":"PANTHER","id":"PTHR10799","locations":[{"end":894,"start":133}],"match_end":894,"match_start":133,"name":"SNF2/RAD54 HELICASE FAMILY"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":250,"start":181},{"end":316,"start":297}],"match_end":316,"match_start":181,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":243,"start":228}],"match_end":243,"match_start":228,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":213,"start":202}],"match_end":213,"match_start":202,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":199,"start":189},{"end":316,"start":303}],"match_end":316,"match_start":189,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2535267,"start_pos":2532282,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":197,"start":188}},{"range":{"end":212,"start":202}},{"range":{"end":242,"start":227}}],"name":"fft1","ortholog_annotations":[{"gene_uniquename":"SJAG_01878","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18398","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01878","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC20G8.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01878","ortholog_taxonid":4932,"ortholog_uniquename":"YAL019W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01878","ortholog_taxonid":4932,"ortholog_uniquename":"YAL019W","reference_uniquename":"PMID:26896847"}],"product":"histone chaperone/ATP-dependent chromatin remodeller, SMARCAD1 family Fft1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0003677","GO:0003682"],"not-binding":["GO:0140750"]}},"subset_termids":["GO:0006355","MONDO:0000426","GO:0006351","GO:0140097","GO:0005694","GO:0006281","GO:0006325","GO:0005634","MONDO:0005093"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000729":null,"GO:0000785":null,"GO:0003677":null,"GO:0003682":null,"GO:0005524":null,"GO:0005634":null,"GO:0031507":null,"GO:0045944":null,"GO:0140750":null,"MONDO:0007507":null,"MONDO:0007619":null,"MONDO:0008416":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01878.1"],"transcripts_by_uniquename":{"SJAG_01878.1":null},"uniprot_identifier":"B6JZ54","uniquename":"SJAG_01878"}


id: SJAG_01879
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97238],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[97239],"is_not":false,"summary":null,"term":"GO:0030150"}],"cellular_component":[{"annotations":[75407],"is_not":false,"summary":null,"term":"GO:0005744"}],"molecular_function":[{"annotations":[97240],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[75406],"is_not":false,"summary":null,"term":"GO:0008320"}]},"dbxrefs":["InterPro:IPR005678","UniProtKB/TrEMBL:B6JZ55","EnsemblGenomes-Gn:SJAG_01879","GOA:B6JZ55","EnsemblGenomes-Tr:EEB06823"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01874"},{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"}],"genes_by_uniquename":{"HGNC:17310":null,"HGNC:17315":null,"SJAG_01879":null,"SPAC3A12.16c":null,"YJL143W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tim17/Tim22/Tim23/Pmp24 family","id":"PF02466","locations":[{"end":122,"start":15}],"match_end":122,"match_start":15,"name":"Tim17"},{"dbname":"PANTHER","id":"PTHR10485","locations":[{"end":147,"start":5}],"match_end":147,"match_start":5,"name":"MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17"},{"dbname":"NCBIFAM","description":"mitochondrial import inner membrane translocase subunit tim17","id":"TIGR00980","interpro_description":"Mitochondrial inner membrane translocase complex, subunit Tim17","interpro_id":"IPR005678","interpro_name":"Tim17","locations":[{"end":153,"start":4}],"match_end":153,"match_start":4,"name":"3a0801so1tim17"}],"location":{"chromosome_name":"supercont5.3","end_pos":2536527,"start_pos":2535726,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":58,"start":50}}],"name":"tim17","ortholog_annotations":[{"gene_uniquename":"SJAG_01879","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17310","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01879","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17315","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01879","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A12.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01879","ortholog_taxonid":4932,"ortholog_uniquename":"YJL143W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01879","ortholog_taxonid":4932,"ortholog_uniquename":"YJL143W","reference_uniquename":"PMID:26896847"}],"product":"TIM23 translocase complex subunit Tim17","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008320","GO:0016887"]}},"subset_termids":["GO:0016887","GO:0005739","GO:0022857","GO:0140318","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005744":null,"GO:0006886":null,"GO:0008320":null,"GO:0016887":null,"GO:0030150":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":35,"start":13}},{"assigned_by":"TMHMM","range":{"end":109,"start":90}},{"assigned_by":"TMHMM","range":{"end":138,"start":116}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01879.1"],"transcripts_by_uniquename":{"SJAG_01879.1":null},"uniprot_identifier":"B6JZ55","uniquename":"SJAG_01879"}


id: SJAG_01880
data:
  {"cv_annotations":{"biological_process":[{"annotations":[60430],"is_not":false,"summary":null,"term":"GO:0006535"}],"cellular_component":[{"annotations":[97242],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[97244],"is_not":false,"summary":null,"term":"GO:0004124"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01880","GOA:B6JZ56","UniProtKB/TrEMBL:B6JZ56","InterPro:IPR001216","InterPro:IPR001926","EnsemblGenomes-Tr:EEB06824","InterPro:IPR036052"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ceo2","uniquename":"SJAG_01875"},{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"}],"genes_by_uniquename":{"SJAG_01880":null,"SPAC3A12.17c":null,"YGR012W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pyridoxal-phosphate dependent enzyme","id":"PF00291","interpro_description":"Tryptophan synthase beta chain-like, PALP domain","interpro_id":"IPR001926","interpro_name":"TrpB-like_PALP","locations":[{"end":368,"start":53}],"match_end":368,"match_start":53,"name":"PALP"},{"dbname":"CDD","description":"CBS_like","id":"cd01561","locations":[{"end":375,"start":57}],"match_end":375,"match_start":57,"name":"CBS_like"},{"dbname":"PROSITE_PATTERNS","description":"Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site.","id":"PS00901","interpro_description":"Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site","interpro_id":"IPR001216","interpro_name":"P-phosphate_BS","locations":[{"end":96,"start":78}],"match_end":96,"match_start":78,"name":"CYS_SYNTHASE"},{"dbname":"PROSITE_PROFILES","description":"Prokaryotic membrane lipoprotein lipid attachment site profile.","id":"PS51257","locations":[{"end":20,"start":1}],"match_end":20,"match_start":1,"name":"PROKAR_LIPOPROTEIN"},{"dbname":"FUNFAM","description":"Related to cysteine synthase","id":"G3DSA:3.40.50.1100:FF:000096","locations":[{"end":386,"start":177}],"match_end":386,"match_start":177},{"dbname":"SUPERFAMILY","id":"SSF53686","interpro_description":"Tryptophan synthase beta chain-like, PALP domain superfamily","interpro_id":"IPR036052","interpro_name":"TrpB-like_PALP_sf","locations":[{"end":382,"start":42}],"match_end":382,"match_start":42,"name":"Tryptophan synthase beta subunit-like PLP-dependent enzymes"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1100","interpro_description":"Tryptophan synthase beta chain-like, PALP domain superfamily","interpro_id":"IPR036052","interpro_name":"TrpB-like_PALP_sf","locations":[{"end":374,"start":56}],"match_end":374,"match_start":56},{"dbname":"PANTHER","id":"PTHR10314","interpro_description":"Cysteine synthase/Cystathionine beta-synthase","interpro_id":"IPR050214","interpro_name":"Cys_Synth/Cystath_Beta-Synth","locations":[{"end":383,"start":51}],"match_end":383,"match_start":51,"name":"CYSTATHIONINE BETA-SYNTHASE"},{"dbname":"NCBIFAM","description":"cysteine synthase A","id":"NF007989","locations":[{"end":390,"start":48}],"match_end":390,"match_start":48,"name":"PRK10717.1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2538174,"start_pos":2536939,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":242,"start":230}}],"name":"cys12","ortholog_annotations":[{"gene_uniquename":"SJAG_01880","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3A12.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01880","ortholog_taxonid":4932,"ortholog_uniquename":"YGR012W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01880","ortholog_taxonid":4932,"ortholog_uniquename":"YGR012W","reference_uniquename":"PMID:26896847"}],"product":"cysteine synthase-like protein Cys12","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004124"]}},"subset_termids":["GO:0006790","GO:0006520","GO:0005739","GO:0016765"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004124":null,"GO:0005739":null,"GO:0006535":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":26,"start":7}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01880.1"],"transcripts_by_uniquename":{"SJAG_01880.1":null},"uniprot_identifier":"B6JZ56","uniquename":"SJAG_01880"}


id: SJAG_01881
data:
  {"coiled_coil_coords":[{"range":{"end":171,"start":151}}],"cv_annotations":{"biological_process":[{"annotations":[64291],"is_not":false,"summary":null,"term":"GO:0042823"},{"annotations":[88074],"is_not":false,"summary":null,"term":"GO:0042818"},{"annotations":[64289],"is_not":false,"summary":null,"term":"GO:0008615"}],"molecular_function":[{"annotations":[64288],"is_not":false,"summary":null,"term":"GO:0010181"},{"annotations":[76125],"is_not":false,"summary":null,"term":"GO:0004733"}],"mondo":[{"annotations":[85861],"is_not":false,"summary":null,"term":"MONDO:0012407"}]},"dbxrefs":["GOA:B6JZ57","EnsemblGenomes-Tr:EEB06825","InterPro:IPR011576","InterPro:IPR012349","InterPro:IPR019740","UniProtKB/TrEMBL:B6JZ57","EnsemblGenomes-Gn:SJAG_01881","InterPro:IPR019576","InterPro:IPR000659"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atg6","uniquename":"SJAG_01876"},{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"}],"genes_by_uniquename":{"HGNC:30260":null,"SJAG_01881":null,"SPAC1093.02":null,"YBR035C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pyridoxamine 5'-phosphate oxidase","id":"PF01243","interpro_description":"Pyridoxamine 5'-phosphate oxidase, N-terminal","interpro_id":"IPR011576","interpro_name":"Pyridox_Oxase_N","locations":[{"end":169,"start":50}],"match_end":169,"match_start":50,"name":"PNPOx_N"},{"dbname":"PFAM","description":"Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region","id":"PF10590","interpro_description":"Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal","interpro_id":"IPR019576","interpro_name":"Pyridoxamine_oxidase_dimer_C","locations":[{"end":228,"start":186}],"match_end":228,"match_start":186,"name":"PNP_phzG_C"},{"dbname":"PROSITE_PATTERNS","description":"Pyridoxamine 5'-phosphate oxidase signature.","id":"PS01064","interpro_description":"Pyridoxamine 5'-phosphate oxidase, conserved site","interpro_id":"IPR019740","interpro_name":"Pyridox_Oxase_CS","locations":[{"end":209,"start":196}],"match_end":209,"match_start":196,"name":"PYRIDOX_OXIDASE"},{"dbname":"SUPERFAMILY","id":"SSF50475","locations":[{"end":228,"start":24}],"match_end":228,"match_start":24,"name":"FMN-binding split barrel"},{"dbname":"GENE3D","id":"G3DSA:2.30.110.10","interpro_description":"FMN-binding split barrel","interpro_id":"IPR012349","interpro_name":"Split_barrel_FMN-bd","locations":[{"end":228,"start":24}],"match_end":228,"match_start":24},{"dbname":"PANTHER","id":"PTHR10851","interpro_description":"Pyridoxamine 5'-phosphate oxidase","interpro_id":"IPR000659","interpro_name":"Pyridox_Oxase","locations":[{"end":228,"start":13}],"match_end":228,"match_start":13,"name":"PYRIDOXINE-5-PHOSPHATE OXIDASE"},{"dbname":"PIRSF","id":"PIRSF000190","interpro_description":"Pyridoxamine 5'-phosphate oxidase","interpro_id":"IPR000659","interpro_name":"Pyridox_Oxase","locations":[{"end":228,"start":1}],"match_end":228,"match_start":1,"name":"Pyd_amn-ph_oxd"},{"dbname":"COILS","id":"Coil","locations":[{"end":171,"start":151}],"match_end":171,"match_start":151,"name":"Coil"},{"dbname":"HAMAP","description":"Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH].","id":"MF_01629","interpro_description":"Pyridoxamine 5'-phosphate oxidase","interpro_id":"IPR000659","interpro_name":"Pyridox_Oxase","locations":[{"end":228,"start":17}],"match_end":228,"match_start":17,"name":"PdxH"},{"dbname":"NCBIFAM","description":"pyridoxal 5'-phosphate synthase","id":"NF004231","locations":[{"end":228,"start":15}],"match_end":228,"match_start":15,"name":"PRK05679.1"},{"dbname":"NCBIFAM","description":"pyridoxamine 5'-phosphate oxidase","id":"TIGR00558","interpro_description":"Pyridoxamine 5'-phosphate oxidase","interpro_id":"IPR000659","interpro_name":"Pyridox_Oxase","locations":[{"end":228,"start":32}],"match_end":228,"match_start":32,"name":"pdxH"}],"location":{"chromosome_name":"supercont5.3","end_pos":2539571,"start_pos":2538885,"strand":"reverse"},"name":"pdx3","ortholog_annotations":[{"gene_uniquename":"SJAG_01881","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30260","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01881","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1093.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01881","ortholog_taxonid":4932,"ortholog_uniquename":"YBR035C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01881","ortholog_taxonid":4932,"ortholog_uniquename":"YBR035C","reference_uniquename":"PMID:26896847"}],"product":"pyridoxamine 5'-phosphate oxidase Pdx3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0010181"],"not-binding":["GO:0004733"]}},"subset_termids":["MONDO:0005027","GO:0006766","GO:0016491","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004733":null,"GO:0008615":null,"GO:0010181":null,"GO:0042818":null,"GO:0042823":null,"MONDO:0012407":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01881.1"],"transcripts_by_uniquename":{"SJAG_01881.1":null},"uniprot_identifier":"B6JZ57","uniquename":"SJAG_01881"}


id: SJAG_01882
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88071],"is_not":false,"summary":null,"term":"GO:0140053"}],"cellular_component":[{"annotations":[88069],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[72592],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01882","EnsemblGenomes-Tr:EEB06826","InterPro:IPR002885","InterPro:IPR011990","UniProtKB/TrEMBL:B6JZ58","GOA:B6JZ58"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1235,"start":1194}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nat10","uniquename":"SJAG_01877"},{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"}],"genes_by_uniquename":{"SJAG_01882":null,"SPAC1093.01":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PPR repeat","id":"PF01535","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":354,"start":334},{"end":1135,"start":1108}],"match_end":1135,"match_start":334,"name":"PPR"},{"dbname":"PFAM","description":"Pentatricopeptide repeat domain","id":"PF13812","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":228,"start":166}],"match_end":228,"match_start":166,"name":"PPR_3"},{"dbname":"PFAM","description":"PPR repeat family","id":"PF13041","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":933,"start":884}],"match_end":933,"match_start":884,"name":"PPR_2"},{"dbname":"PROSITE_PROFILES","description":"Pentatricopeptide (PPR) repeat profile.","id":"PS51375","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":950,"start":885},{"end":1138,"start":1104}],"match_end":1138,"match_start":885,"name":"PPR"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":242,"start":140},{"end":469,"start":255},{"end":1037,"start":744},{"end":1219,"start":1042}],"match_end":1219,"match_start":140,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR47933","interpro_description":"Mitochondrial RNA Processing and Respiration","interpro_id":"IPR051240","interpro_name":"Mito_RNA-Proc/Resp","locations":[{"end":537,"start":3}],"match_end":537,"match_start":3,"name":"PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1235,"start":1194}],"match_end":1235,"match_start":1194,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":1235,"start":1225}],"match_end":1235,"match_start":1225,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"pentatricopeptide repeat","id":"TIGR00756","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":920,"start":888}],"match_end":920,"match_start":888,"name":"PPR"}],"location":{"chromosome_name":"supercont5.3","end_pos":2543691,"start_pos":2539984,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":652,"start":648}}],"name":"ppr5","ortholog_annotations":[{"gene_uniquename":"SJAG_01882","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1093.01","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial PPR repeat protein Ppr5","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005759":null,"GO:0140053":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01882.1"],"transcripts_by_uniquename":{"SJAG_01882.1":null},"uniprot_identifier":"B6JZ58","uniquename":"SJAG_01882"}


id: SJAG_01883
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[88656],"is_not":false,"summary":null,"term":"GO:0005783"}],"molecular_function":[{"annotations":[88657],"is_not":false,"summary":null,"term":"GO:0004559"}]},"dbxrefs":["InterPro:IPR008928","GOA:B6JZ59","EnsemblGenomes-Tr:EEB06827","EnsemblGenomes-Gn:SJAG_01883","InterPro:IPR008313","InterPro:IPR012341","UniProtKB/TrEMBL:B6JZ59"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fft1","uniquename":"SJAG_01878"},{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"}],"genes_by_uniquename":{"SJAG_01883":null,"SPAC12B10.16c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Metal-independent alpha-mannosidase (GH125)","id":"PF06824","interpro_description":"Metal-independent alpha-mannosidase","interpro_id":"IPR008313","interpro_name":"GH125","locations":[{"end":502,"start":85}],"match_end":502,"match_start":85,"name":"Glyco_hydro_125"},{"dbname":"SMART","id":"SM01149","interpro_description":"Metal-independent alpha-mannosidase","interpro_id":"IPR008313","interpro_name":"GH125","locations":[{"end":503,"start":85}],"match_end":503,"match_start":85,"name":"DUF1237_2a"},{"dbname":"SUPERFAMILY","id":"SSF48208","interpro_description":"Six-hairpin glycosidase superfamily","interpro_id":"IPR008928","interpro_name":"6-hairpin_glycosidase_sf","locations":[{"end":514,"start":55}],"match_end":514,"match_start":55,"name":"Six-hairpin glycosidases"},{"dbname":"GENE3D","id":"G3DSA:1.50.10.10","interpro_description":"Six-hairpin glycosidase-like superfamily","interpro_id":"IPR012341","interpro_name":"6hp_glycosidase-like_sf","locations":[{"end":516,"start":69}],"match_end":516,"match_start":69},{"dbname":"PANTHER","id":"PTHR31047","interpro_description":"Metal-independent alpha-mannosidase","interpro_id":"IPR008313","interpro_name":"GH125","locations":[{"end":515,"start":27}],"match_end":515,"match_start":27,"name":"MEIOTICALLY UP-REGULATED GENE 157 PROTEIN"},{"dbname":"PIRSF","id":"PIRSF028846","interpro_description":"Metal-independent alpha-mannosidase","interpro_id":"IPR008313","interpro_name":"GH125","locations":[{"end":514,"start":63}],"match_end":514,"match_start":63,"name":"UCP028846"}],"location":{"chromosome_name":"supercont5.3","end_pos":2546740,"start_pos":2545073,"strand":"forward"},"name":"mug157","ortholog_annotations":[{"gene_uniquename":"SJAG_01883","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.16c","reference_uniquename":"PMID:21511999"}],"product":"alpha-mannosidase GH125 family Mug157","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004559"]}},"subset_termids":["GO:0005783","GO:0016798"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004559":null,"GO:0005783":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01883.1"],"transcripts_by_uniquename":{"SJAG_01883.1":null},"uniprot_identifier":"B6JZ59","uniquename":"SJAG_01883"}


id: SJAG_01884
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88654],"is_not":false,"summary":null,"term":"GO:1903469"}],"cellular_component":[{"annotations":[88651],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88652],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[60646],"is_not":false,"summary":null,"term":"GO:0032299"}],"molecular_function":[{"annotations":[88655],"is_not":false,"summary":null,"term":"GO:0004523"}],"mondo":[{"annotations":[85539],"is_not":false,"summary":null,"term":"MONDO:0012471"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ60","InterPro:IPR013924","GOA:B6JZ60","EnsemblGenomes-Gn:SJAG_01884","EnsemblGenomes-Tr:EEB06828"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":111,"start":84}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tim17","uniquename":"SJAG_01879"},{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"}],"genes_by_uniquename":{"HGNC:24116":null,"SJAG_01884":null,"SPAC12B10.15c":null,"YLR154C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribonuclease H2 non-catalytic subunit (Ylr154p-like)","id":"PF08615","interpro_description":"Ribonuclease H2, subunit C","interpro_id":"IPR013924","interpro_name":"RNase_H2_suC","locations":[{"end":154,"start":28}],"match_end":154,"match_start":28,"name":"RNase_H2_suC"},{"dbname":"CDD","description":"RNase_H2-C","id":"cd09271","interpro_description":"Ribonuclease H2, subunit C","interpro_id":"IPR013924","interpro_name":"RNase_H2_suC","locations":[{"end":131,"start":29}],"match_end":131,"match_start":29,"name":"RNase_H2-C"},{"dbname":"GENE3D","id":"G3DSA:2.40.128.680","locations":[{"end":157,"start":3}],"match_end":157,"match_start":3},{"dbname":"PANTHER","id":"PTHR47204","locations":[{"end":155,"start":13}],"match_end":155,"match_start":13,"name":"OS02G0168900 PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":111,"start":84}],"match_end":111,"match_start":84,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":103,"start":91}],"match_end":103,"match_start":91,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2547584,"start_pos":2547063,"strand":"forward"},"name":"rnh203","ortholog_annotations":[{"gene_uniquename":"SJAG_01884","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24116","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01884","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01884","ortholog_taxonid":4932,"ortholog_uniquename":"YLR154C","reference_uniquename":"PMID:29761456"}],"product":"ribonuclease H2 complex subunit Rnh203","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004523"]}},"subset_termids":["GO:0140098","GO:0016788","GO:0006260","MONDO:0005559","GO:0005829","MONDO:0005046","GO:0005634","MONDO:0006025"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004523":null,"GO:0005634":null,"GO:0005829":null,"GO:0032299":null,"GO:1903469":null,"MONDO:0012471":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01884.1"],"transcripts_by_uniquename":{"SJAG_01884.1":null},"uniprot_identifier":"B6JZ60","uniquename":"SJAG_01884"}


id: SJAG_01885
data:
  {"cv_annotations":{"biological_process":[{"annotations":[80745],"is_not":false,"summary":null,"term":"GO:0009267"},{"annotations":[80742],"is_not":false,"summary":null,"term":"GO:0043408"}],"cellular_component":[{"annotations":[88646],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[88647],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[70112],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[80741],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01885","InterPro:IPR008271","InterPro:IPR011009","EnsemblGenomes-Tr:EEB06829","UniProtKB/TrEMBL:B6JZ61","InterPro:IPR036936","GOA:B6JZ61","InterPro:IPR000095","InterPro:IPR000719"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":22,"start":1}},{"range":{"end":351,"start":328}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cys12","uniquename":"SJAG_01880"},{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"}],"genes_by_uniquename":{"SJAG_01885":null,"SPAC12B10.14c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":630,"start":383}],"match_end":630,"match_start":383,"name":"Pkinase"},{"dbname":"PFAM","description":"P21-Rho-binding domain","id":"PF00786","interpro_description":"CRIB domain","interpro_id":"IPR000095","interpro_name":"CRIB_dom","locations":[{"end":194,"start":163}],"match_end":194,"match_start":163,"name":"PBD"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":509,"start":497}],"match_end":509,"match_start":497,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"CRIB domain profile.","id":"PS50108","interpro_description":"CRIB domain","interpro_id":"IPR000095","interpro_name":"CRIB_dom","locations":[{"end":177,"start":164}],"match_end":177,"match_start":164,"name":"CRIB"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":634,"start":383}],"match_end":634,"match_start":383,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":633,"start":383}],"match_end":633,"match_start":383,"name":"serkin_6"},{"dbname":"SMART","id":"SM00285","interpro_description":"CRIB domain","interpro_id":"IPR000095","interpro_name":"CRIB_dom","locations":[{"end":199,"start":164}],"match_end":199,"match_start":164,"name":"PBD_5"},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":654,"start":382}],"match_end":654,"match_start":382,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":652,"start":459}],"match_end":652,"match_start":459,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":458,"start":319}],"match_end":458,"match_start":319,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.90.810.10","interpro_description":"CRIB domain superfamily","interpro_id":"IPR036936","interpro_name":"CRIB_dom_sf","locations":[{"end":197,"start":158}],"match_end":197,"match_start":158,"name":"CRIB domain"},{"dbname":"PANTHER","id":"PTHR45832","interpro_description":"Serine/threonine-protein kinase PAK 3-like","interpro_id":"IPR051931","interpro_name":"PAK3-like","locations":[{"end":648,"start":175}],"match_end":648,"match_start":175,"name":"SERINE/THREONINE-PROTEIN KINASE SAMKA-RELATED-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":22,"start":1},{"end":351,"start":328}],"match_end":351,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2550398,"start_pos":2548392,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":82,"start":64}},{"range":{"end":103,"start":91}},{"range":{"end":138,"start":119}},{"range":{"end":334,"start":322}}],"name":"tea5","ortholog_annotations":[{"gene_uniquename":"SJAG_01885","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.14c","reference_uniquename":"PMID:26896847"}],"product":"pseudokinase Tea5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004674"]}},"subset_termids":["GO:0016301","GO:0140096","GO:0004672","GO:0023052","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004674":null,"GO:0005524":null,"GO:0005829":null,"GO:0009267":null,"GO:0043408":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01885.1"],"transcripts_by_uniquename":{"SJAG_01885.1":null},"uniprot_identifier":"B6JZ61","uniquename":"SJAG_01885"}


id: SJAG_01886
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88645],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[88642],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88643],"is_not":false,"summary":null,"term":"GO:0034657"},{"annotations":[88644],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ62","InterPro:IPR013144","EnsemblGenomes-Gn:SJAG_01886","InterPro:IPR024964","GOA:B6JZ62","InterPro:IPR006595","EnsemblGenomes-Tr:EEB06830"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pdx3","uniquename":"SJAG_01881"},{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"}],"genes_by_uniquename":{"HGNC:15857":null,"SJAG_01886":null,"SPAC12B10.13":null,"YMR135C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CTLH/CRA C-terminal to LisH motif domain","id":"PF10607","interpro_description":"CTLH/CRA C-terminal to LisH motif domain","interpro_id":"IPR024964","interpro_name":"CTLH/CRA","locations":[{"end":186,"start":36}],"match_end":186,"match_start":36,"name":"CTLH"},{"dbname":"PROSITE_PROFILES","description":"C-terminal to LisH (CTLH) motif profile.","id":"PS50897","interpro_description":"CTLH, C-terminal LisH motif","interpro_id":"IPR006595","interpro_name":"CTLH_C","locations":[{"end":92,"start":41}],"match_end":92,"match_start":41,"name":"CTLH"},{"dbname":"PROSITE_PROFILES","description":"LIS1 homology (LisH) motif profile.","id":"PS50896","interpro_description":"LIS1 homology motif","interpro_id":"IPR006594","interpro_name":"LisH","locations":[{"end":29,"start":1}],"match_end":29,"match_start":1,"name":"LISH"},{"dbname":"SMART","id":"SM00668","interpro_description":"CTLH, C-terminal LisH motif","interpro_id":"IPR006595","interpro_name":"CTLH_C","locations":[{"end":92,"start":35}],"match_end":92,"match_start":35,"name":"ctlh"},{"dbname":"SMART","id":"SM00757","interpro_description":"CRA domain","interpro_id":"IPR013144","interpro_name":"CRA_dom","locations":[{"end":194,"start":99}],"match_end":194,"match_start":99,"name":"toby_final6"},{"dbname":"PANTHER","id":"PTHR12864","interpro_description":"Ubiquitination and Signaling Pathway Regulator","interpro_id":"IPR050618","interpro_name":"Ubq-SigPath_Reg","locations":[{"end":169,"start":1}],"match_end":169,"match_start":1,"name":"RAN BINDING PROTEIN 9-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2551626,"start_pos":2550901,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":207,"start":195}}],"name":"gid8","ortholog_annotations":[{"gene_uniquename":"SJAG_01886","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15857","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01886","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01886","ortholog_taxonid":4932,"ortholog_uniquename":"YMR135C","reference_uniquename":"PMID:29761456"}],"product":"GID complex subunit Gid8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0030163","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0034657":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01886.1"],"transcripts_by_uniquename":{"SJAG_01886.1":null},"uniprot_identifier":"B6JZ62","uniquename":"SJAG_01886"}


id: SJAG_01887
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73083],"is_not":false,"summary":null,"term":"GO:0006298"},{"annotations":[73082],"is_not":false,"summary":null,"term":"GO:0006289"}],"cellular_component":[{"annotations":[73077],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[88634],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[73080],"is_not":false,"summary":null,"term":"GO:0000111"},{"annotations":[73081],"is_not":false,"summary":null,"term":"GO:0071942"}],"molecular_function":[{"annotations":[73078],"is_not":false,"summary":null,"term":"GO:0003684"},{"annotations":[73079],"is_not":false,"summary":null,"term":"GO:0003697"}],"mondo":[{"annotations":[87031],"is_not":false,"summary":null,"term":"MONDO:0010211"}]},"dbxrefs":["InterPro:IPR018328","EnsemblGenomes-Gn:SJAG_01887","InterPro:IPR018325","InterPro:IPR018326","UniProtKB/TrEMBL:B6JZ63","InterPro:IPR038765","GOA:B6JZ63","InterPro:IPR036985","EnsemblGenomes-Tr:EEB06831","InterPro:IPR018327","InterPro:IPR042488","InterPro:IPR004583"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":32,"start":1}},{"range":{"end":315,"start":287}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppr5","uniquename":"SJAG_01882"},{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"}],"genes_by_uniquename":{"HGNC:12816":null,"SJAG_01887":null,"SPAC12B10.12c":null,"YDR314C":null,"YER162C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Rad4 beta-hairpin domain 3","id":"PF10405","interpro_description":"Rad4 beta-hairpin domain 3","interpro_id":"IPR018328","interpro_name":"Rad4_beta-hairpin_dom3","locations":[{"end":618,"start":546}],"match_end":618,"match_start":546,"name":"BHD_3"},{"dbname":"PFAM","description":"Rad4 transglutaminase-like domain","id":"PF03835","interpro_description":"Rad4/PNGase transglutaminase-like fold","interpro_id":"IPR018325","interpro_name":"Rad4/PNGase_transGLS-fold","locations":[{"end":430,"start":293}],"match_end":430,"match_start":293,"name":"Rad4"},{"dbname":"PFAM","description":"Rad4 beta-hairpin domain 1","id":"PF10403","interpro_description":"Rad4 beta-hairpin domain 1","interpro_id":"IPR018326","interpro_name":"Rad4_beta-hairpin_dom1","locations":[{"end":488,"start":437}],"match_end":488,"match_start":437,"name":"BHD_1"},{"dbname":"SMART","id":"SM01031","interpro_description":"Rad4 beta-hairpin domain 2","interpro_id":"IPR018327","interpro_name":"BHD_2","locations":[{"end":539,"start":491}],"match_end":539,"match_start":491,"name":"BHD_2_2"},{"dbname":"SMART","id":"SM01032","interpro_description":"Rad4 beta-hairpin domain 3","interpro_id":"IPR018328","interpro_name":"Rad4_beta-hairpin_dom3","locations":[{"end":620,"start":546}],"match_end":620,"match_start":546,"name":"BHD_3_2"},{"dbname":"SMART","id":"SM01030","interpro_description":"Rad4 beta-hairpin domain 1","interpro_id":"IPR018326","interpro_name":"Rad4_beta-hairpin_dom1","locations":[{"end":489,"start":435}],"match_end":489,"match_start":435,"name":"BHD_1_2"},{"dbname":"SUPERFAMILY","id":"SSF54001","interpro_description":"Papain-like cysteine peptidase superfamily","interpro_id":"IPR038765","interpro_name":"Papain-like_cys_pep_sf","locations":[{"end":232,"start":97},{"end":450,"start":323}],"match_end":450,"match_start":97,"name":"Cysteine proteinases"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.2460","interpro_description":"Rad4, beta-hairpin domain 3 superfamily","interpro_id":"IPR042488","interpro_name":"Rad4_BHD3_sf","locations":[{"end":625,"start":552}],"match_end":625,"match_start":552},{"dbname":"GENE3D","id":"G3DSA:3.30.60.290","locations":[{"end":536,"start":492}],"match_end":536,"match_start":492},{"dbname":"GENE3D","id":"G3DSA:2.20.20.110","locations":[{"end":490,"start":438}],"match_end":490,"match_start":438},{"dbname":"GENE3D","id":"G3DSA:3.90.260.10","interpro_description":"Transglutaminase-like superfamily","interpro_id":"IPR036985","interpro_name":"Transglutaminase-like_sf","locations":[{"end":245,"start":80},{"end":437,"start":310}],"match_end":437,"match_start":80},{"dbname":"PANTHER","id":"PTHR12135","interpro_description":"DNA repair protein Rad4","interpro_id":"IPR004583","interpro_name":"DNA_repair_Rad4","locations":[{"end":660,"start":6}],"match_end":660,"match_start":6,"name":"DNA REPAIR PROTEIN XP-C / RAD4"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":32,"start":1},{"end":315,"start":287}],"match_end":315,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":313,"start":294}],"match_end":313,"match_start":294,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":16,"start":7}],"match_end":16,"match_start":7,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"XPC/Rad4 family nucleotide excision DNA repair protein","id":"TIGR00605","interpro_description":"DNA repair protein Rad4-like","interpro_id":"IPR018026","interpro_name":"DNA_repair_Rad4-like","locations":[{"end":660,"start":66}],"match_end":660,"match_start":66,"name":"rad4"}],"location":{"chromosome_name":"supercont5.3","end_pos":2554412,"start_pos":2552427,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":18,"start":4}},{"range":{"end":35,"start":25}},{"range":{"end":180,"start":169}},{"range":{"end":313,"start":293}},{"range":{"end":422,"start":410}}],"name":"rhp41","ortholog_annotations":[{"gene_uniquename":"SJAG_01887","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12816","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01887","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01887","ortholog_taxonid":4932,"ortholog_uniquename":"YDR314C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01887","ortholog_taxonid":4932,"ortholog_uniquename":"YER162C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01887","ortholog_taxonid":4932,"ortholog_uniquename":"YER162C","reference_uniquename":"PMID:26896847"}],"product":"DNA repair protein Rhp41","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003684","GO:0003697"]}},"subset_termids":["GO:0005634","MONDO:0005066","GO:0006281","GO:0072686","MONDO:0021190","MONDO:0005093","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000111":null,"GO:0003684":null,"GO:0003697":null,"GO:0005737":null,"GO:0006289":null,"GO:0006298":null,"GO:0071942":null,"GO:0072686":null,"MONDO:0010211":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01887.1"],"transcripts_by_uniquename":{"SJAG_01887.1":null},"uniprot_identifier":"B6JZ63","uniquename":"SJAG_01887"}


id: SJAG_01888
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88629],"is_not":false,"summary":null,"term":"GO:1904541"},{"annotations":[70901],"is_not":false,"summary":null,"term":"GO:0009251"}],"cellular_component":[{"annotations":[88625],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[88626],"is_not":false,"summary":null,"term":"GO:1990819"},{"annotations":[88628],"is_not":false,"summary":null,"term":"GO:0031520"}],"molecular_function":[{"annotations":[70902],"is_not":false,"summary":null,"term":"GO:0004338"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01888","EnsemblGenomes-Tr:EEB06832","InterPro:IPR001547","InterPro:IPR017853","UniProtKB/TrEMBL:B6JZ64","GOA:B6JZ64"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug157","uniquename":"SJAG_01883"},{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"}],"genes_by_uniquename":{"SJAG_01888":null,"SPAC12B10.11":null,"YDR261C":null,"YLR300W":null,"YOR190W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cellulase (glycosyl hydrolase family 5)","id":"PF00150","interpro_description":"Glycoside hydrolase, family 5","interpro_id":"IPR001547","interpro_name":"Glyco_hydro_5","locations":[{"end":453,"start":214}],"match_end":453,"match_start":214,"name":"Cellulase"},{"dbname":"SUPERFAMILY","id":"SSF51445","interpro_description":"Glycoside hydrolase superfamily","interpro_id":"IPR017853","interpro_name":"Glycoside_hydrolase_SF","locations":[{"end":550,"start":154}],"match_end":550,"match_start":154,"name":"(Trans)glycosidases"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":564,"start":160}],"match_end":564,"match_start":160,"name":"Glycosidases"},{"dbname":"PANTHER","id":"PTHR31297","interpro_description":"Glycosyl Hydrolase 5 (Cellulase A)","interpro_id":"IPR050386","interpro_name":"Glycosyl_hydrolase_5","locations":[{"end":554,"start":78}],"match_end":554,"match_start":78,"name":"GLUCAN ENDO-1,6-BETA-GLUCOSIDASE B"}],"location":{"chromosome_name":"supercont5.3","end_pos":2556239,"start_pos":2554500,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":126,"start":116}}],"name":"exg2","ortholog_annotations":[{"gene_uniquename":"SJAG_01888","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01888","ortholog_taxonid":4932,"ortholog_uniquename":"YDR261C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01888","ortholog_taxonid":4932,"ortholog_uniquename":"YLR300W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01888","ortholog_taxonid":4932,"ortholog_uniquename":"YOR190W","reference_uniquename":"PMID:29761456"}],"product":"cell wall glucan glucosidase Exg2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004338"]}},"subset_termids":["GO:0005975","GO:0000747","GO:0015629","GO:0071554","GO:0005886","GO:0000935","GO:0016798"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000935":null,"GO:0004338":null,"GO:0009251":null,"GO:0031520":null,"GO:1904541":null,"GO:1990819":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":59,"start":37}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01888.1"],"transcripts_by_uniquename":{"SJAG_01888.1":null},"uniprot_identifier":"B6JZ64","uniquename":"SJAG_01888"}


id: SJAG_01889
data:
  {"coiled_coil_coords":[{"range":{"end":59,"start":39}},{"range":{"end":363,"start":336}}],"cv_annotations":{"biological_process":[{"annotations":[88624],"is_not":false,"summary":null,"term":"GO:1902408"}],"cellular_component":[{"annotations":[88621],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[88623],"is_not":false,"summary":null,"term":"GO:0120105"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06833","UniProtKB/TrEMBL:B6JZ65","InterPro:IPR032634","EnsemblGenomes-Gn:SJAG_01889"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rnh203","uniquename":"SJAG_01884"},{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"}],"genes_by_uniquename":{"SJAG_01889":null,"SPAC12B10.10":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gef2-related medial cortical node protein Nod1","id":"PF17114","interpro_description":"Gef2/Nod1 domain","interpro_id":"IPR032634","interpro_name":"Gef2/Nod1_dom","locations":[{"end":185,"start":39}],"match_end":185,"match_start":39,"name":"Nod1"},{"dbname":"COILS","id":"Coil","locations":[{"end":59,"start":39},{"end":363,"start":336}],"match_end":363,"match_start":39,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2557634,"start_pos":2556387,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":261,"start":248}},{"range":{"end":326,"start":309}}],"name":"nod1","ortholog_annotations":[{"gene_uniquename":"SJAG_01889","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.10","reference_uniquename":"PMID:21511999"}],"product":"medial cortical node Gef2-related protein Nod1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0070938","GO:0015629","GO:0005938","GO:0000281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0071341":null,"GO:0120105":null,"GO:1902408":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01889.1"],"transcripts_by_uniquename":{"SJAG_01889.1":null},"uniprot_identifier":"B6JZ65","uniquename":"SJAG_01889"}


id: SJAG_01890
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88618],"is_not":false,"summary":null,"term":"GO:1990543"}],"cellular_component":[{"annotations":[80577],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[80576],"is_not":false,"summary":null,"term":"GO:0000095"}],"mondo":[{"annotations":[86297],"is_not":false,"summary":null,"term":"MONDO:0014775"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06834","EnsemblGenomes-Gn:SJAG_01890","InterPro:IPR002067","InterPro:IPR023395","InterPro:IPR018108","UniProtKB/TrEMBL:B6JZ66","GOA:B6JZ66"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tea5","uniquename":"SJAG_01885"},{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"}],"genes_by_uniquename":{"HGNC:20661":null,"SJAG_01890":null,"SPAC12B10.09":null,"YNL003C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial carrier protein","id":"PF00153","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":78,"start":2},{"end":168,"start":85},{"end":263,"start":178}],"match_end":263,"match_start":2,"name":"Mito_carr"},{"dbname":"PROSITE_PROFILES","description":"Solute carrier (Solcar) repeat profile.","id":"PS50920","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":74,"start":1},{"end":167,"start":83},{"end":260,"start":177}],"match_end":260,"match_start":1,"name":"SOLCAR"},{"dbname":"PRINTS","description":"Mitochondrial carrier protein signature","id":"PR00926","interpro_description":"Mitochondrial carrier protein","interpro_id":"IPR002067","interpro_name":"Mit_carrier","locations":[{"end":33,"start":19},{"end":158,"start":140},{"end":208,"start":186}],"match_end":208,"match_start":19,"name":"MITOCARRIER"},{"dbname":"FUNFAM","description":"S-adenosylmethionine mitochondrial carrier protein-like","id":"G3DSA:1.50.40.10:FF:000018","locations":[{"end":264,"start":4}],"match_end":264,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF103506","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":256,"start":2}],"match_end":256,"match_start":2,"name":"Mitochondrial carrier"},{"dbname":"GENE3D","id":"G3DSA:1.50.40.10","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":265,"start":4}],"match_end":265,"match_start":4,"name":"Mitochondrial carrier domain"},{"dbname":"PANTHER","id":"PTHR45667","locations":[{"end":263,"start":2}],"match_end":263,"match_start":2,"name":"S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":2559179,"start_pos":2558184,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":45,"start":33}},{"range":{"end":82,"start":70}}],"name":"pet801","ortholog_annotations":[{"gene_uniquename":"SJAG_01890","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20661","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01890","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01890","ortholog_taxonid":4932,"ortholog_uniquename":"YNL003C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01890","ortholog_taxonid":4932,"ortholog_uniquename":"YNL003C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial carrier, S-adenosylmethionine","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0000095"]}},"subset_termids":["GO:0005739","MONDO:0004069","MONDO:0005066","GO:0022857","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000095":null,"GO:0005743":null,"GO:1990543":null,"MONDO:0014775":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01890.1"],"transcripts_by_uniquename":{"SJAG_01890.1":null},"uniprot_identifier":"B6JZ66","uniquename":"SJAG_01890"}


id: SJAG_01893
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB06836","UniProtKB/TrEMBL:B6JZ68","EnsemblGenomes-Gn:SJAG_01893"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"},{"name":"pby1","uniquename":"SJAG_01897"},{"name":"bun62","uniquename":"SJAG_01898"}],"genes_by_uniquename":{"SJAG_01893":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":2561498,"start_pos":2561175,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":21,"start":6}},{"range":{"end":53,"start":45}}],"product":"dubious","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01893.1"],"transcripts_by_uniquename":{"SJAG_01893.1":null},"uniprot_identifier":"B6JZ68","uniquename":"SJAG_01893"}


id: SJAG_01894
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88607],"is_not":false,"summary":null,"term":"GO:0044396"},{"annotations":[79531],"is_not":false,"summary":null,"term":"GO:0051016"},{"annotations":[88610],"is_not":false,"summary":null,"term":"GO:1904600"},{"annotations":[88611],"is_not":false,"summary":null,"term":"GO:1903475"},{"annotations":[88612],"is_not":false,"summary":null,"term":"GO:1902404"}],"cellular_component":[{"annotations":[79526],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[88604],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[88605],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[79528],"is_not":false,"summary":null,"term":"GO:0008290"}],"molecular_function":[{"annotations":[79530],"is_not":false,"summary":null,"term":"GO:0051015"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JZ69","EnsemblGenomes-Gn:SJAG_01894","EnsemblGenomes-Tr:EEB06837","InterPro:IPR017865","InterPro:IPR042489","InterPro:IPR037282","GOA:B6JZ69","InterPro:IPR002189","InterPro:IPR042276"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"},{"name":"pby1","uniquename":"SJAG_01897"},{"name":"bun62","uniquename":"SJAG_01898"},{"name":"sdg1","uniquename":"SJAG_01899"}],"genes_by_uniquename":{"HGNC:1488":null,"HGNC:1490":null,"SJAG_01894":null,"SPAC12B10.07":null,"YKL007W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"F-actin capping protein alpha subunit","id":"PF01267","interpro_description":"F-actin-capping protein subunit alpha","interpro_id":"IPR002189","interpro_name":"CapZ_alpha","locations":[{"end":258,"start":7}],"match_end":258,"match_start":7,"name":"F-actin_cap_A"},{"dbname":"PROSITE_PATTERNS","description":"F-actin capping protein alpha subunit signature 2.","id":"PS00749","interpro_description":"F-actin capping protein, alpha subunit, conserved site","interpro_id":"IPR017865","interpro_name":"F-actin_cap_asu_CS","locations":[{"end":243,"start":233}],"match_end":243,"match_start":233,"name":"F_ACTIN_CAPPING_A_2"},{"dbname":"PROSITE_PATTERNS","description":"F-actin capping protein alpha subunit signature 1.","id":"PS00748","interpro_description":"F-actin capping protein, alpha subunit, conserved site","interpro_id":"IPR017865","interpro_name":"F-actin_cap_asu_CS","locations":[{"end":187,"start":179}],"match_end":187,"match_start":179,"name":"F_ACTIN_CAPPING_A_1"},{"dbname":"PRINTS","description":"F-actin capping protein alpha subunit signature","id":"PR00191","interpro_description":"F-actin-capping protein subunit alpha","interpro_id":"IPR002189","interpro_name":"CapZ_alpha","locations":[{"end":162,"start":148},{"end":191,"start":178},{"end":248,"start":229}],"match_end":248,"match_start":148,"name":"FACTINCAPA"},{"dbname":"SUPERFAMILY","id":"SSF90096","interpro_description":"F-actin-capping protein subunit alpha/beta","interpro_id":"IPR037282","interpro_name":"CapZ_alpha/beta","locations":[{"end":256,"start":6}],"match_end":256,"match_start":6,"name":"Subunits of heterodimeric actin filament capping protein Capz"},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.210","interpro_description":"F-actin-capping protein subunit alpha/beta, domain 2","interpro_id":"IPR042276","interpro_name":"CapZ_alpha/beta_2","locations":[{"end":235,"start":101}],"match_end":235,"match_start":101},{"dbname":"GENE3D","id":"G3DSA:3.30.1140.60","interpro_description":"F-actin capping protein, alpha subunit, domain 1","interpro_id":"IPR042489","interpro_name":"CapZ_alpha_1","locations":[{"end":100,"start":3}],"match_end":100,"match_start":3},{"dbname":"PANTHER","id":"PTHR10653","interpro_description":"F-actin-capping protein subunit alpha","interpro_id":"IPR002189","interpro_name":"CapZ_alpha","locations":[{"end":257,"start":6}],"match_end":257,"match_start":6,"name":"F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA"}],"location":{"chromosome_name":"supercont5.3","end_pos":2562763,"start_pos":2561738,"strand":"reverse"},"name":"acp1","ortholog_annotations":[{"gene_uniquename":"SJAG_01894","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1488","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01894","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1490","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01894","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01894","ortholog_taxonid":4932,"ortholog_uniquename":"YKL007W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01894","ortholog_taxonid":4932,"ortholog_uniquename":"YKL007W","reference_uniquename":"PMID:26896847"}],"product":"F-actin capping protein alpha subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051015"]}},"subset_termids":["GO:0030479","GO:0015629","GO:0003779","GO:0005938","GO:0000747","GO:0030036","GO:0000281","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0008290":null,"GO:0030479":null,"GO:0032153":null,"GO:0044396":null,"GO:0051015":null,"GO:0051016":null,"GO:0051286":null,"GO:1902404":null,"GO:1903475":null,"GO:1904600":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01894.1"],"transcripts_by_uniquename":{"SJAG_01894.1":null},"uniprot_identifier":"B6JZ69","uniquename":"SJAG_01894"}


id: SJAG_01895
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":143,"start":1}}],"cv_annotations":{"biological_process":[{"annotations":[71168],"is_not":false,"summary":null,"term":"GO:0034553"},{"annotations":[71169],"is_not":false,"summary":null,"term":"GO:0006099"}],"cellular_component":[{"annotations":[58155],"is_not":false,"summary":null,"term":"GO:0005759"}],"mondo":[{"annotations":[87381],"is_not":false,"summary":null,"term":"MONDO:0011121"}]},"dbxrefs":["UniProtKB/Swiss-Prot:B6JZ70","GOA:B6JZ70","EnsemblGenomes-Tr:EEB06838","InterPro:IPR028882","InterPro:IPR036714","EnsemblGenomes-Gn:SJAG_01895","InterPro:IPR005631"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"},{"name":"pby1","uniquename":"SJAG_01897"},{"name":"bun62","uniquename":"SJAG_01898"},{"name":"sdg1","uniquename":"SJAG_01899"},{"name":"hul6","uniquename":"SJAG_01900"}],"genes_by_uniquename":{"HGNC:26034":null,"SJAG_01895":null,"SPAC12B10.06c":null,"YOL071W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Flavinator of succinate dehydrogenase","id":"PF03937","interpro_description":"Flavinator of succinate dehydrogenase","interpro_id":"IPR005631","interpro_name":"SDH","locations":[{"end":129,"start":55}],"match_end":129,"match_start":55,"name":"Sdh5"},{"dbname":"FUNFAM","description":"Succinate dehydrogenase assembly factor 2, mitochondrial","id":"G3DSA:1.10.150.250:FF:000002","locations":[{"end":137,"start":49}],"match_end":137,"match_start":49},{"dbname":"SUPERFAMILY","id":"SSF109910","interpro_description":"Flavinator of succinate dehydrogenase superfamily","interpro_id":"IPR036714","interpro_name":"SDH_sf","locations":[{"end":120,"start":49}],"match_end":120,"match_start":49,"name":"YgfY-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.150.250","interpro_description":"Flavinator of succinate dehydrogenase superfamily","interpro_id":"IPR036714","interpro_name":"SDH_sf","locations":[{"end":135,"start":51}],"match_end":135,"match_start":51,"name":"Flavinator of succinate dehydrogenase"},{"dbname":"PANTHER","id":"PTHR12469","locations":[{"end":142,"start":35}],"match_end":142,"match_start":35,"name":"PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL"},{"dbname":"HAMAP","description":"Succinate dehydrogenase assembly factor 2, mitochondrial [SDHAF2].","id":"MF_03057","interpro_description":"Succinate dehydrogenase assembly factor 2, mitochondrial","interpro_id":"IPR028882","interpro_name":"SDHAF2","locations":[{"end":141,"start":39}],"match_end":141,"match_start":39,"name":"SDHAF2"}],"location":{"chromosome_name":"supercont5.3","end_pos":2563482,"start_pos":2562992,"strand":"forward"},"name":"emi5","ortholog_annotations":[{"gene_uniquename":"SJAG_01895","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26034","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01895","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01895","ortholog_taxonid":4932,"ortholog_uniquename":"YOL071W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01895","ortholog_taxonid":4932,"ortholog_uniquename":"YOL071W","reference_uniquename":"PMID:26896847"}],"product":"succinate dehydrogenase complex assembly protein Emi5","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005739","GO:0006091","MONDO:0004992","GO:0007005","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005759":null,"GO:0006099":null,"GO:0034553":null,"MONDO:0011121":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01895.1"],"transcripts_by_uniquename":{"SJAG_01895.1":null},"uniprot_identifier":"B6JZ70","uniquename":"SJAG_01895"}


id: SJAG_01896
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88596],"is_not":false,"summary":null,"term":"GO:0034982"},{"annotations":[88597],"is_not":false,"summary":null,"term":"GO:0007005"}],"cellular_component":[{"annotations":[88594],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[60284],"is_not":false,"summary":null,"term":"GO:0030145"},{"annotations":[60285],"is_not":false,"summary":null,"term":"GO:0070006"}],"mondo":[{"annotations":[87029],"is_not":false,"summary":null,"term":"MONDO:0013163"}]},"dbxrefs":["InterPro:IPR036005","GOA:B6JZ71","InterPro:IPR000994","InterPro:IPR007865","InterPro:IPR001131","UniProtKB/TrEMBL:B6JZ71","EnsemblGenomes-Gn:SJAG_01896","InterPro:IPR029149","EnsemblGenomes-Tr:EEB06839"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"},{"name":"pby1","uniquename":"SJAG_01897"},{"name":"bun62","uniquename":"SJAG_01898"},{"name":"sdg1","uniquename":"SJAG_01899"},{"name":"hul6","uniquename":"SJAG_01900"},{"name":"zds1","uniquename":"SJAG_01901"}],"genes_by_uniquename":{"HGNC:28052":null,"SJAG_01896":null,"SPAC12B10.05":null,"YER078C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Metallopeptidase family M24","id":"PF00557","interpro_description":"Peptidase M24","interpro_id":"IPR000994","interpro_name":"Pept_M24","locations":[{"end":461,"start":239}],"match_end":461,"match_start":239,"name":"Peptidase_M24"},{"dbname":"PFAM","description":"Aminopeptidase P, N-terminal domain","id":"PF05195","interpro_description":"Aminopeptidase P, N-terminal","interpro_id":"IPR007865","interpro_name":"Aminopep_P_N","locations":[{"end":178,"start":61}],"match_end":178,"match_start":61,"name":"AMP_N"},{"dbname":"CDD","description":"Prolidase","id":"cd01087","locations":[{"end":470,"start":237}],"match_end":470,"match_start":237,"name":"Prolidase"},{"dbname":"PROSITE_PATTERNS","description":"Aminopeptidase P and proline dipeptidase signature.","id":"PS00491","interpro_description":"Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site","interpro_id":"IPR001131","interpro_name":"Peptidase_M24B_aminopep-P_CS","locations":[{"end":413,"start":401}],"match_end":413,"match_start":401,"name":"PROLINE_PEPTIDASE"},{"dbname":"SMART","id":"SM01011","interpro_description":"Aminopeptidase P, N-terminal","interpro_id":"IPR007865","interpro_name":"Aminopep_P_N","locations":[{"end":190,"start":56}],"match_end":190,"match_start":56,"name":"AMP_N_2"},{"dbname":"SUPERFAMILY","id":"SSF53092","interpro_description":"Creatinase/Aminopeptidase P/Spt16, N-terminal","interpro_id":"IPR029149","interpro_name":"Creatin/AminoP/Spt16_N","locations":[{"end":232,"start":55}],"match_end":232,"match_start":55,"name":"Creatinase/prolidase N-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF55920","interpro_description":"Creatinase/aminopeptidase-like","interpro_id":"IPR036005","interpro_name":"Creatinase/aminopeptidase-like","locations":[{"end":482,"start":235}],"match_end":482,"match_start":235,"name":"Creatinase/aminopeptidase"},{"dbname":"GENE3D","id":"G3DSA:3.40.350.10","interpro_description":"Creatinase/Aminopeptidase P/Spt16, N-terminal","interpro_id":"IPR029149","interpro_name":"Creatin/AminoP/Spt16_N","locations":[{"end":229,"start":55}],"match_end":229,"match_start":55},{"dbname":"GENE3D","id":"G3DSA:3.90.230.10","interpro_description":"Creatinase/aminopeptidase-like","interpro_id":"IPR036005","interpro_name":"Creatinase/aminopeptidase-like","locations":[{"end":494,"start":231}],"match_end":494,"match_start":231,"name":"Creatinase/methionine aminopeptidase superfamily"},{"dbname":"PANTHER","id":"PTHR43226","interpro_description":"Xaa-Pro dipeptidase-like","interpro_id":"IPR052433","interpro_name":"X-Pro_dipept-like","locations":[{"end":481,"start":33}],"match_end":481,"match_start":33,"name":"XAA-PRO AMINOPEPTIDASE 3"}],"location":{"chromosome_name":"supercont5.3","end_pos":2565554,"start_pos":2563591,"strand":"reverse"},"name":"icp55","ortholog_annotations":[{"gene_uniquename":"SJAG_01896","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28052","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01896","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01896","ortholog_taxonid":4932,"ortholog_uniquename":"YER078C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial intermediate cleavage peptidase Icp55","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030145"],"not-binding":["GO:0070006"]}},"subset_termids":["MONDO:0005240","GO:0008233","MONDO:0006025","GO:0051604","GO:0007005","GO:0005739","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0007005":null,"GO:0030145":null,"GO:0034982":null,"GO:0070006":null,"MONDO:0013163":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01896.1"],"transcripts_by_uniquename":{"SJAG_01896.1":null},"uniprot_identifier":"B6JZ71","uniquename":"SJAG_01896"}


id: SJAG_01897
data:
  {"coiled_coil_coords":[{"range":{"end":177,"start":157}}],"cv_annotations":{"cellular_component":[{"annotations":[88590],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88591],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[71464],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[88593],"is_not":false,"summary":null,"term":"GO:0004835"}],"mondo":[{"annotations":[86796],"is_not":false,"summary":null,"term":"MONDO:0014372"}]},"dbxrefs":["InterPro:IPR027746","GOA:B6JZ72","InterPro:IPR004344","EnsemblGenomes-Gn:SJAG_01897","EnsemblGenomes-Tr:EEB06840","UniProtKB/TrEMBL:B6JZ72"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"},{"name":"pby1","uniquename":"SJAG_01897"},{"name":"bun62","uniquename":"SJAG_01898"},{"name":"sdg1","uniquename":"SJAG_01899"},{"name":"hul6","uniquename":"SJAG_01900"},{"name":"zds1","uniquename":"SJAG_01901"},{"name":"put1","uniquename":"SJAG_01903"}],"genes_by_uniquename":{"HGNC:1312":null,"HGNC:16118":null,"HGNC:19963":null,"HGNC:21211":null,"HGNC:26242":null,"HGNC:28976":null,"SJAG_01897":null,"SPAC12B10.04":null,"YBR094W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tubulin-tyrosine ligase family","id":"PF03133","interpro_description":"Tubulin-tyrosine ligase/Tubulin polyglutamylase","interpro_id":"IPR004344","interpro_name":"TTL/TTLL_fam","locations":[{"end":370,"start":70}],"match_end":370,"match_start":70,"name":"TTL"},{"dbname":"PROSITE_PROFILES","description":"TTL domain profile.","id":"PS51221","interpro_description":"Tubulin-tyrosine ligase/Tubulin polyglutamylase","interpro_id":"IPR004344","interpro_name":"TTL/TTLL_fam","locations":[{"end":377,"start":4}],"match_end":377,"match_start":4,"name":"TTL"},{"dbname":"SUPERFAMILY","id":"SSF56059","locations":[{"end":246,"start":134},{"end":347,"start":286}],"match_end":347,"match_start":134,"name":"Glutathione synthetase ATP-binding domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.470.20","locations":[{"end":391,"start":178}],"match_end":391,"match_start":178},{"dbname":"PANTHER","id":"PTHR47551","interpro_description":"Probable tubulin-tyrosine ligase","interpro_id":"IPR027746","interpro_name":"TTL","locations":[{"end":399,"start":3}],"match_end":399,"match_start":3,"name":"TUBULIN--TYROSINE LIGASE PBY1-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":177,"start":157}],"match_end":177,"match_start":157,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2567153,"start_pos":2565856,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":60,"start":51}},{"range":{"end":182,"start":163}}],"name":"pby1","ortholog_annotations":[{"gene_uniquename":"SJAG_01897","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1312","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16118","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19963","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21211","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26242","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28976","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":4932,"ortholog_uniquename":"YBR094W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01897","ortholog_taxonid":4932,"ortholog_uniquename":"YBR094W","reference_uniquename":"PMID:26896847"}],"product":"P-body associated protein Pby1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004835"]}},"subset_termids":["MONDO:0005328","GO:0140096","GO:0005634","GO:0016874","GO:0005829","GO:0000932"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000932":null,"GO:0004835":null,"GO:0005634":null,"GO:0005829":null,"MONDO:0014372":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01897.1"],"transcripts_by_uniquename":{"SJAG_01897.1":null},"uniprot_identifier":"B6JZ72","uniquename":"SJAG_01897"}


id: SJAG_01898
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[88586],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[88587],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[88588],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88589],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06841","InterPro:IPR036322","EnsemblGenomes-Gn:SJAG_01898","InterPro:IPR001680","UniProtKB/TrEMBL:B6JZ73","InterPro:IPR017986"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"},{"name":"pby1","uniquename":"SJAG_01897"},{"name":"bun62","uniquename":"SJAG_01898"},{"name":"sdg1","uniquename":"SJAG_01899"},{"name":"hul6","uniquename":"SJAG_01900"},{"name":"zds1","uniquename":"SJAG_01901"},{"name":"put1","uniquename":"SJAG_01903"},{"uniquename":"SJAG_01904"}],"genes_by_uniquename":{"HGNC:19667":null,"HGNC:2936":null,"SJAG_01898":null,"SPAC12B10.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":383,"start":357}],"match_end":383,"match_start":357,"name":"WD40"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":392,"start":351}],"match_end":392,"match_start":351,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":383,"start":351}],"match_end":383,"match_start":351,"name":"WD_REPEATS_REGION"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":261,"start":223},{"end":341,"start":302},{"end":383,"start":344},{"end":430,"start":386},{"end":534,"start":497}],"match_end":534,"match_start":223,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":274,"start":202},{"end":432,"start":305},{"end":534,"start":496}],"match_end":534,"match_start":202,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":434,"start":13},{"end":536,"start":492}],"match_end":536,"match_start":13},{"dbname":"PANTHER","id":"PTHR14107","interpro_description":"WD repeat creC family regulators","interpro_id":"IPR051362","interpro_name":"WD_repeat_creC_regulators","locations":[{"end":536,"start":12}],"match_end":536,"match_start":12,"name":"WD REPEAT PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":2569216,"start_pos":2567537,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":121,"start":97}}],"name":"bun62","ortholog_annotations":[{"gene_uniquename":"SJAG_01898","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19667","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01898","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2936","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01898","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.03","reference_uniquename":"PMID:21511999"}],"product":"WD repeat protein Wdr20","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01898.1"],"transcripts_by_uniquename":{"SJAG_01898.1":null},"uniprot_identifier":"B6JZ73","uniquename":"SJAG_01898"}


