# terms

id: MONDO:0012652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of limb-girdle muscular dystrophy most often characterized by an adult onset (but ranging from 11 to 51 years) of mainly proximal lower limb weakness, with difficulties standing on tiptoes being one of the initial signs. Proximal upper limb and distal lower limb weakness is also common as well as atrophy of the quadriceps (most commonly), biceps brachii, and lower leg muscles. However, calf hypertrophy has also been reported in some cases. LGMD2L progresses slowly, with most patients remaining ambulatory until late adulthood.","definition_xrefs":["Orphanet:206549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2L","secondary_identifiers":["GARD:12536","OMIM:611307","UMLS:C1969785","MEDGEN:370102","DOID:0110284","MESH:C566968"],"synonyms":[{"name":"ANO5 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2L","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in ANO5","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2L","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 12","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2L","type":"exact"}],"termid":"MONDO:0012652","xrefs":{"Monarch":{"xref_id":"0012652"}}}


id: GO:0036274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lapatinib stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lapatinib","termid":"GO:0036274"}


id: PBO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENV10 family protein (predicted)","termid":"PBO:0000868"}


id: GO:0030324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:jid","UBERON:0002048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung development","termid":"GO:0030324"}


id: GO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000436"}


id: PBO:0064042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 76","termid":"PBO:0064042"}


id: PBO:0044364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 53","termid":"PBO:0044364"}


id: PBO:0039980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 3","termid":"PBO:0039980"}


id: GO:0001164
data:
  {"annotated_genes":["SJAG_00692","SJAG_02813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76080,79738],"is_not":false,"summary":null,"term":"GO:0001164"}]},"cv_name":"molecular_function","definition":"Binding to a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery. This site is often referred to as the CORE element. In mammalian cells, the CORE element functions in conjunction with the Upstream Control Element (UCE), while in fungi, protozoa, and plants, the CORE element functions without a UCE.","definition_xrefs":["GOC:txnOH","PMID:12865296","PMID:14969726","PMID:8057832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core promoter sequence-specific DNA binding","termid":"GO:0001046"},{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_02813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase I core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001187"],"synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding","type":"exact"},{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity","type":"related"},{"name":"transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting","type":"related"}],"termid":"GO:0001164","terms_by_termid":{"GO:0001164":null}}


id: PBO:0112691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex, GTPase regulator subunit Vtc1","termid":"PBO:0112691"}


id: GO:0106329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-phenylalanine + O2 = 3-phenylpyruvate + H2O2 + NH4(+).","definition_xrefs":["RHEA:61240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-phenylalaine oxidase activity","termid":"GO:0106329"}


id: PBO:0058910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12128","termid":"PBO:0058910"}


id: MONDO:0015729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 16 is a rare chromosomal anomaly syndrome with a highly variable phenotype ranging from minor anomalies with normal development to intrauterine growth retardation, abnormal skin pigmentation, craniofacial and body asymmetry, cardiac (e.g. ventricular septal defect) and genital (e.g. hypospadias, cryptorchidism) anomalies, scoliosis and hearing loss to neonatal death. Additional features observed include skeletal malformations (e.g. clino/polydactyly, talipes), mild facial dysmorphism, and developmental delay.","definition_xrefs":["Orphanet:1708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 16 trisomy","termid":"MONDO:0022180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 16","secondary_identifiers":["MEDGEN:1633950","UMLS:C4707009","MESH:C538041","GARD:18741","SCTID:764621006"],"synonyms":[{"name":"Mosaic trisomy chromosome 16","type":"exact"},{"name":"Mosaic trisomy type 16","type":"exact"},{"name":"trisomy 16 mosaicism","type":"exact"}],"termid":"MONDO:0015729","xrefs":{"Monarch":{"xref_id":"0015729"}}}


id: GO:0019556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-histidine catabolic process to glutamate and formamide","secondary_identifiers":["MetaCyc:HISDEG-PWY"],"synonyms":[{"name":"histidine breakdown to glutamate and formamide","type":"exact"},{"name":"histidine catabolic process to glutamate and formamide","type":"broad"},{"name":"histidine degradation to glutamate and formamide","type":"exact"}],"termid":"GO:0019556"}


id: GO:1902334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose from vacuole to cytoplasm.","definition_xrefs":["PMID:23583552","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transport","termid":"GO:0015755"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fructose export from vacuole to cytoplasm","synonyms":[{"name":"fructose transport from vacuole to cytoplasm","type":"exact"}],"termid":"GO:1902334"}


id: PBO:0040554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7","termid":"PBO:0040554"}


id: PBO:0024798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_controls","termid":"PBO:0024798"}


id: PBO:0117107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX2 antisense RNA 2","termid":"PBO:0117107"}


id: PBO:0057533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 649","termid":"PBO:0057533"}


id: GO:1990942
data:
  {"annotated_genes":["SJAG_01613","SJAG_01224","SJAG_02336","SJAG_01297","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94559,98979,99587,104259,108638],"is_not":false,"summary":null,"term":"GO:1990942"}]},"cv_name":"biological_process","definition":"A mechanism to recapture 'lost' chromosomes (chromosomes which have become detached from the spindle) during metaphase of mitotic chromosome segregation. Chromosomes with unattached kinetochores are migrated along (non polar) spindle microtubules to the mitotic spindle pole body by a combination of microtubule depolymerisation and 'kinetochore sliding' (migration of the chromosome along the microtubule). The chromosome subsequently migrates along the polar spindle microtubule to the metaphase plate.","definition_xrefs":["PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02336":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"mitotic metaphase chromosome recapture","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1905185"],"synonyms":[{"name":"kinetochore retrieval","type":"exact"},{"name":"metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in kinetochore retrieval","type":"exact"},{"name":"microtubule sliding involved in metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in mitotic metaphase chromosome recapture","type":"related"},{"name":"microtubule sliding involved in sister kinetochore recapture","type":"exact"},{"name":"sister kinetochore recapture","type":"exact"}],"termid":"GO:1990942","terms_by_termid":{"GO:1990942":null}}


id: PBO:0038804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 8","termid":"PBO:0038804"}


id: PBO:0064974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 30, pseudogene","termid":"PBO:0064974"}


id: PBO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 7","termid":"PBO:0045585"}


id: PBO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Mis19/Eic1","termid":"PBO:0016083"}


id: GO:0140223
data:
  {"annotated_genes":["SJAG_01207","SJAG_01475","SJAG_04274","SJAG_01808","SJAG_03618","SJAG_04766","SJAG_03354","SJAG_03285","SJAG_03095","SJAG_02747","SJAG_00741","SJAG_04614","SJAG_04083","SJAG_00735","SJAG_00584","SJAG_00159","SJAG_00758","SJAG_03206","SJAG_00901","SJAG_01710","SJAG_02174","SJAG_05331","SJAG_00116","SJAG_04654","SJAG_00995","SJAG_02541","SJAG_04852","SJAG_00095","SJAG_04977","SJAG_00585","SJAG_00067","SJAG_01827","SJAG_00958","SJAG_04917","SJAG_00872","SJAG_01523","SJAG_04368","SJAG_00202","SJAG_03752","SJAG_00150","SJAG_03007","SJAG_05339","SJAG_03546","SJAG_03120","SJAG_00421","SJAG_02815","SJAG_01712","SJAG_03900","SJAG_00650","SJAG_02813","SJAG_00692","SJAG_01744","SJAG_00512","SJAG_03107","SJAG_02458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108062,93536,95941,110120,71808,116840,105650,64238,109534,72722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001181"},{"annotations":[90247,74065,94510,75981,109364,113358,105841,80688,71755,77618,90620,97974,70903,108865,114620,77077,89641,103523,102658,103981,75311,92541,93875,108052,115533,80693,88848,115462,72332,115187,117959,106430,74860,77218,79512,100589,112476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016251"},{"annotations":[95944,109515,99944,107302,89278,115760,116596,88540,113040,77903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000995"}]},"cv_name":"molecular_function","definition":"A molecular function required for core promoter activity that mediates the assembly of the RNA polymerase holoenzyme at promoter DNA to form the pre-initiation complex (PIC). General transcription factors (GTFs) bind to and open promoter DNA, initiate RNA synthesis and stimulate the escape of the polymerase from the promoter. Not all subunits of the general transcription factor are necessarily present at all promoters to initiate transcription. GTFs act at each promoter, although the exact subunit composition at individual promoters may vary.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00095":null,"SJAG_00116":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00202":null,"SJAG_00421":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00650":null,"SJAG_00692":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00958":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01710":null,"SJAG_01712":null,"SJAG_01744":null,"SJAG_01808":null,"SJAG_01827":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03120":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03618":null,"SJAG_03752":null,"SJAG_03900":null,"SJAG_04083":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04766":null,"SJAG_04852":null,"SJAG_04917":null,"SJAG_04977":null,"SJAG_05331":null,"SJAG_05339":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"general transcription initiation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GTF activity","type":"exact"},{"name":"basal transcription factor activity","type":"exact"},{"name":"general transcription factor activity","type":"exact"}],"termid":"GO:0140223","terms_by_termid":{"GO:0000995":null,"GO:0001181":null,"GO:0016251":null}}


id: PR:Q6LA55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.09c gene.","definition_xrefs":["UniProtKB:Q6LA55","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0648 protein C3H5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.09c","synonyms":[{"name":"Spom972h-SPAC3H5.09c","type":"exact"}],"termid":"PR:Q6LA55"}


id: GO:0022894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 20 to 85 picoSiemens that opens in response to stimulus by internal calcium ions. Intermediate conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["OMIM:602754","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intermediate conductance calcium-activated potassium channel activity","synonyms":[{"name":"IK KCa channels","type":"exact"},{"name":"IK calcium-activated potassium channel activity","type":"exact"},{"name":"intermediate conductance KCa channels","type":"exact"}],"termid":"GO:0022894"}


id: PBO:0053325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 114","termid":"PBO:0053325"}


id: GO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the C-terminal propeptide at Ala-Asp in type I and II procollagens and at Arg-Asp in type III.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete procollagen C-endopeptidase activity (obsolete GO:0017026)","synonyms":[{"name":"BMP1","type":"narrow"},{"name":"carboxyprocollagen peptidase activity","type":"related"},{"name":"procollagen C-endopeptidase activity","type":"exact"},{"name":"procollagen C-proteinase activity","type":"related"},{"name":"procollagen C-terminal peptidase activity","type":"related"},{"name":"procollagen C-terminal proteinase activity","type":"related"},{"name":"procollagen carboxy-terminal proteinase activity","type":"related"},{"name":"procollagen carboxypeptidase activity","type":"related"},{"name":"procollagen peptidase activity","type":"related"}],"termid":"GO:0017026"}


id: MONDO:0009202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thakker-Donnai syndrome","secondary_identifiers":["OMIM:227255","MEDGEN:346465","Orphanet:1780","GARD:5158","UMLS:C1856892","MESH:C536503"],"synonyms":[{"name":"Dysmorphism multiple structural anomalies","type":"related"},{"name":"Dysmorphism-multiple structural anomalies syndrome","type":"exact"},{"name":"dysmorphic facial features and multiple structural abnormalities","type":"related"},{"name":"facial dysmorphism with multiple malformations","type":"related"}],"termid":"MONDO:0009202","xrefs":{"Monarch":{"xref_id":"0009202"}}}


id: PBO:0090778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-O ortholog Mal2","termid":"PBO:0090778"}


id: MONDO:0020383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fundus pulverulentus is a rare form of patterned dystrophy of the retinal pigment epithelium characterized by a granular appearance in the macula, with coarse and punctiform mottling of the retinal pigment epithelium within the macular region. Association with choroidal neovascularization has been reported.","definition_xrefs":["Orphanet:99004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fundus pulverulentus","secondary_identifiers":["GARD:19613","ICD10CM:H35.5","MEDGEN:1669231","icd11.foundation:871251875","UMLS:C4749286"],"termid":"MONDO:0020383","xrefs":{"Monarch":{"xref_id":"0020383"}}}


id: PBO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structurte updated","termid":"PBO:0016084"}


id: MONDO:0010472
data:
  {"annotated_genes":["SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87242],"is_not":false,"summary":null,"term":"MONDO:0010472"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027","MONDO:0002320","MONDO:0024322","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 36","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080470","UMLS:C4317295","SCTID:733451007","GARD:12401","MEDGEN:1382656","Orphanet:324422","OMIM:300884"],"synonyms":[{"name":"ALG13-CDG","type":"exact"},{"name":"CDG Is","type":"related"},{"name":"CDG syndrome type Is","type":"exact"},{"name":"CDG-Is","type":"exact"},{"name":"CDG1S","type":"exact"},{"name":"DEE36","type":"exact"},{"name":"EIEE36","type":"exact"},{"name":"congenital disorder of glycosylation type 1s","type":"exact"},{"name":"congenital disorder of glycosylation type Is","type":"exact"},{"name":"congenital disorder of glycosylation, type Is","type":"related"},{"name":"developmental and epileptic encephalopathy 36","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 36","type":"exact"}],"termid":"MONDO:0010472","terms_by_termid":{"MONDO:0010472":null},"xrefs":{"Monarch":{"xref_id":"0010472"}}}


id: PATO:0002272
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located at the same continuous distance relative to another object.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parallel to","termid":"PATO:0002272"}


id: PBO:0059042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multimerin 1","termid":"PBO:0059042"}


id: GO:1900926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-threonine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-threonine import across plasma membrane","termid":"GO:1903807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of L-threonine import across plasma membrane","synonyms":[{"name":"regulation of L-threonine import","type":"broad"},{"name":"regulation of L-threonine uptake","type":"exact"}],"termid":"GO:1900926"}


id: MONDO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 20","secondary_identifiers":["OMIM:618830","UMLS:C5394226","MEDGEN:1717195"],"synonyms":[{"name":"AUTISM, SUSCEPTIBILITY TO, 20","type":"exact"},{"name":"AUTS20","type":"exact"},{"name":"autism, susceptibility to, 20","type":"exact"}],"termid":"MONDO:0030004","xrefs":{"Monarch":{"xref_id":"0030004"}}}


id: PBO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 5","termid":"PBO:0075175"}


id: GO:2000715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000715"}


id: PBO:0067115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 159, pseudogene","termid":"PBO:0067115"}


id: PBO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase modifier subunit","termid":"PBO:0048467"}


id: PR:P78774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.06","secondary_identifiers":["UniProtKB:P78774"],"synonyms":[{"name":"Spom972h-ARPC1A","type":"exact"},{"name":"arp2/3 complex 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p41-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78774"}


id: PBO:0069530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 799, pseudogene","termid":"PBO:0069530"}


id: MONDO:1012503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, cattle","secondary_identifiers":["OMIA:002053-9913"],"termid":"MONDO:1012503","xrefs":{"Monarch":{"xref_id":"1012503"}}}


id: FYPO:0001653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abnormal lysine import","termid":"FYPO:0001651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal lysine import during vegetative growth","synonyms":[{"name":"abnormal L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal L-lysine import during vegetative growth","type":"exact"},{"name":"abnormal lysine import during mitotic cell cycle","type":"related"},{"name":"abnormal lysine import into cell during vegetative growth","type":"exact"},{"name":"abnormal lysine uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001653"}


id: PATO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurring or existing at the same time or having the same period or phase.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous","termid":"PATO:0000695"}


id: MONDO:0000636
data:
  {"annotated_genes":["SJAG_00031","SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the musculoskeletal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"musculoskeletal system benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060099","NCIT:C166356","MEDGEN:1709701","UMLS:C5237920"],"synonyms":[{"name":"musculoskeletal system benign neoplasm","type":"exact"}],"termid":"MONDO:0000636","terms_by_termid":{"MONDO:0007908":null,"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000636"}}}


id: PBO:0039784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 11","termid":"PBO:0039784"}


id: PBO:0090233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Cdc15","termid":"PBO:0090233"}


id: PBO:0052892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-3","termid":"PBO:0052892"}


id: MONDO:0014341
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86993],"is_not":false,"summary":null,"term":"MONDO:0014341"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014283","OMIM:615771","MEDGEN:862720","DOID:0090136"],"synonyms":[{"name":"CDCBM56","type":"exact"},{"name":"CDCBM6","type":"related"},{"name":"TUBB complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBB","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 6","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 6","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 6","type":"related"}],"termid":"MONDO:0014341","terms_by_termid":{"MONDO:0014341":null},"xrefs":{"Monarch":{"xref_id":"0014341"}}}


id: GO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biosynthetic process inhibitor activity (obsolete GO:0017149)","synonyms":[{"name":"protein synthesis inhibitor activity","type":"exact"},{"name":"protein anabolism inhibitor activity","type":"exact"},{"name":"protein biosynthetic process inhibitor activity","type":"exact"},{"name":"protein formation inhibitor activity","type":"exact"}],"termid":"GO:0017149"}


id: GO:0033456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"GCG codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033456"}


id: PBO:0076876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 28","termid":"PBO:0076876"}


id: PBO:0059152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 4","termid":"PBO:0059152"}


id: GO:1902867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"negatively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retina development in camera-type eye","synonyms":[{"name":"down regulation of retina development in camera-style eye","type":"exact"},{"name":"down regulation of retina development in camera-type eye","type":"exact"},{"name":"down regulation of retinal development","type":"related"},{"name":"down-regulation of retina development in camera-style eye","type":"exact"},{"name":"down-regulation of retina development in camera-type eye","type":"exact"},{"name":"down-regulation of retinal development","type":"related"},{"name":"downregulation of retina development in camera-style eye","type":"exact"},{"name":"downregulation of retina development in camera-type eye","type":"exact"},{"name":"downregulation of retinal development","type":"related"},{"name":"inhibition of retina development in camera-style eye","type":"narrow"},{"name":"inhibition of retina development in camera-type eye","type":"narrow"},{"name":"inhibition of retinal development","type":"related"},{"name":"negative regulation of retina development in camera-style eye","type":"exact"},{"name":"negative regulation of retinal development","type":"related"}],"termid":"GO:1902867"}


id: PBO:0072791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 1 pseudogene 1","termid":"PBO:0072791"}


id: GO:0018639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: toluene + 1/2 O2 = benzyl alcohol, and xylene + 1/2 O2 = methylbenzyl alcohol.","definition_xrefs":["UM-BBD_enzymeID:e0172"],"gene_count":0,"genotype_count":0,"name":"obsolete xylene monooxygenase activity (obsolete GO:0018639)","termid":"GO:0018639"}


id: GO:0102913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(aminomethyl)indole + S-adenosyl-L-methionine = (1H-indol-3-yl)-N-methylmethanamine + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:52268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"3-aminomethylindole N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8686"],"termid":"GO:0102913"}


id: MONDO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly syndrome, Guadalajara","termid":"MONDO:0000111","xrefs":{"Monarch":{"xref_id":"0000111"}}}


id: GO:0010736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a serum response element (SRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"serum response element binding","termid":"GO:0010736"}


id: PBO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX39B antisense RNA 1","termid":"PBO:0044754"}


id: PBO:0062431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 93 pseudogene","termid":"PBO:0062431"}


id: FYPO:0001964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aculeacin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to aculeacin A","synonyms":[{"name":"resistance to aculeacin A during mitotic cell cycle","type":"related"},{"name":"resistance to aculeacin A during vegetative growth","type":"exact"},{"name":"resistant to aculeacin A","type":"exact"}],"termid":"FYPO:0001964"}


id: GO:1900469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:dgf","PMID:8056324","GOC:TermGenie","PMID:8614637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylserine metabolic process","termid":"GO:0150180"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"down regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidylserine formation","type":"exact"},{"name":"down regulation of phosphatidylserine synthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidylserine formation","type":"exact"},{"name":"down-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"downregulation of phosphatidylserine anabolism","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidylserine formation","type":"exact"},{"name":"downregulation of phosphatidylserine synthesis","type":"exact"},{"name":"inhibition of phosphatidylserine anabolism","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthesis","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidylserine formation","type":"exact"},{"name":"inhibition of phosphatidylserine synthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine anabolism","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine formation","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900469"}


id: MONDO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 37","secondary_identifiers":["MEDGEN:1677534","OMIM:618429","UMLS:C5193091","DOID:0111927","GARD:18408"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 37","type":"related"},{"name":"SPGF37","type":"related"}],"termid":"MONDO:0032744","xrefs":{"Monarch":{"xref_id":"0032744"}}}


id: GO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions that takes place outside the cell occurring in response to tissue damage and initiated within blood plasma by the action of activated Factor XII (Hageman Factor) on prekallikrein to convert it to plasma kallikrein, and the subsequent reaction of plasma kallikrein with high molecular weight kininogen. The ultimate product of the plasma kallikrein-kinin cascade is bradykinin, an agent known to induce smooth muscle contraction, vasoconstriction, and increased vascular permeability.","definition_xrefs":["PMID:14501145","PMID:11842287","ISBN:0721601871","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}


id: GO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the cell surface protein basigin.","definition_xrefs":["PMID:9360995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha3-beta1 integrin-basigin complex","synonyms":[{"name":"ITGA3-ITGB1-BSG complex","type":"narrow"}],"termid":"GO:0071080"}


id: GO:0062145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamate + L-propargylglycine = ADP + H+ + L-gamma-glutamyl-L-propargylglycine + phosphate.","definition_xrefs":["RHEA:59896","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-propargylglycine--L-glutamate ligase activity","termid":"GO:0062145"}


id: GO:0120506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 2 S-adenosyl-L-methionine = 2H+ + N6,N6-methyl-L-lysyl79-[histone H3] + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:15371351","PMID:14732680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016741","GO:0003674","GO:0003824","GO:0008276"],"is_obsolete":false,"name":"histone H3K79 dimethyltransferase activity","termid":"GO:0120506"}


id: PBO:0046866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2 pseudogene 1","termid":"PBO:0046866"}


id: PBO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence updated","termid":"PBO:0002438"}


id: GO:0031841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neuropeptide Y receptor binding","synonyms":[{"name":"NPY receptor binding","type":"exact"},{"name":"neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031841"}


id: GO:0010511
data:
  {"annotated_genes":["SJAG_02613","SJAG_03170","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90768,104741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[117924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:tb","GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010511","terms_by_termid":{"GO:1902647":null,"GO:1902648":null}}


id: PR:O42923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator cip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.18","synonyms":[{"name":"Spom972h-cip1","type":"exact"},{"name":"csx1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42923"}


id: GO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an increase in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to increased systemic arterial blood pressure","termid":"GO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of increased arterial stretch","termid":"GO:0003023"}


id: PBO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Tpr1","termid":"PBO:0002571"}


id: PBO:0075898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 overlapping transcript 4","termid":"PBO:0075898"}


id: PBO:0084227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; also required for all protein lipoylation; expression is regulated by levels of 5,10-methylene-THF","termid":"PBO:0084227"}


id: FYPO:0008063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases abnormally, or does not change, immediately following osmotic shock. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:36200871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased immediate intracellular calcium spike following osmotic shock","termid":"FYPO:0008063"}


id: PBO:0045231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C18","termid":"PBO:0045231"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: PBO:0018089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad9 homolog Crb2","termid":"PBO:0018089"}


id: PBO:0056873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence C (pseudogene)","termid":"PBO:0056873"}


id: PBO:0067926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 228","termid":"PBO:0067926"}


id: MONDO:0013591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple epiphyseal dysplasia in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia due to collagen 9 anomaly","termid":"MONDO:0015627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"epiphyseal dysplasia, multiple, 6","secondary_identifiers":["OMIM:614135","UMLS:C2675767","DOID:0070301","GARD:13376","MEDGEN:436517"],"synonyms":[{"name":"COL9A1 multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"EDM6","type":"related"},{"name":"epiphyseal dysplasia, multiple, 6","type":"exact"},{"name":"epiphyseal dysplasia, multiple, type 6","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in COL9A1","type":"exact"},{"name":"multiple epiphyseal dysplasia 6","type":"related"}],"termid":"MONDO:0013591","xrefs":{"Monarch":{"xref_id":"0013591"}}}


id: GO:0009743
data:
  {"annotated_genes":["SJAG_00472","SJAG_04312","SJAG_01754","SJAG_01699","SJAG_01254","SJAG_00574","SJAG_02444","SJAG_03081","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116955,115923,94589,106870,107221,109393,106279,109899,102210],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbohydrate","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to carbohydrate stimulus","type":"exact"}],"termid":"GO:0009743","terms_by_termid":{"GO:0010619":null}}


id: GO:0048478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the collapse of stalled replication forks.","definition_xrefs":["GOC:vw","PMID:14560029"],"gene_count":0,"genotype_count":0,"name":"obsolete replication fork protection (obsolete GO:0048478)","synonyms":[{"name":"replication fork maintenance","type":"broad"},{"name":"replication fork stabilization","type":"broad"}],"termid":"GO:0048478"}


id: PBO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.86","termid":"PBO:0002283"}


id: GO:1900812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of helvolic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"helvolic acid metabolic process","termid":"GO:1900810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"helvolic acid biosynthetic process","synonyms":[{"name":"Fumigacin anabolism","type":"related"},{"name":"Fumigacin biosynthesis","type":"related"},{"name":"Fumigacin biosynthetic process","type":"related"},{"name":"Fumigacin formation","type":"related"},{"name":"Fumigacin synthesis","type":"related"},{"name":"helvolic acid anabolism","type":"exact"},{"name":"helvolic acid biosynthesis","type":"exact"},{"name":"helvolic acid formation","type":"exact"},{"name":"helvolic acid synthesis","type":"exact"}],"termid":"GO:1900812"}


id: MONDO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autoimmune/inflammatory optic neuropathy","secondary_identifiers":["Orphanet:499047","GARD:22037","MEDGEN:1842963","UMLS:C5681239"],"termid":"MONDO:0044685","xrefs":{"Monarch":{"xref_id":"0044685"}}}


id: GO:0061310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in cardiac neural crest cell differentiation.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac neural crest cell differentiation involved in heart development (obsolete GO:0061310)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"}],"termid":"GO:0061310"}


id: PBO:0004093
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.2.4","termid":"PBO:0004093"}


id: MONDO:0015005
data:
  {"annotated_genes":["SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87380],"is_not":false,"summary":null,"term":"MONDO:0015005"}]},"cv_name":"mondo","definition":"A pyridoxine-dependent epilepsy that has material basis in homozygous or compound heterozygous mutation in the PLPBP gene on chromosome 8p11.23.","definition_xrefs":["DOID:0080769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"},{"relation_name":"is_a","term_name":"epilepsy, early-onset","termid":"MONDO:0957599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"epilepsy, early-onset, vitamin B6-dependent","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617290","MEDGEN:934599","UMLS:C4310632"],"synonyms":[{"name":"EPVB6D","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent; EPVB6D","type":"exact"}],"termid":"MONDO:0015005","terms_by_termid":{"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0015005"}}}


id: PBO:0088845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit V","termid":"PBO:0088845"}


id: GO:2000198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"negatively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribonucleoprotein complex localization","synonyms":[{"name":"negative regulation of RNP localization","type":"exact"},{"name":"negative regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000198"}


id: GO:0098568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the mycolate outer membrane that faces the environment and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos","PMID:18316738","PMID:18567661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external side of cell outer membrane","termid":"GO:0031240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"external side of mycolate outer membrane","termid":"GO:0098568"}


id: PBO:0050735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 21","termid":"PBO:0050735"}


id: GO:0033666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont activates, maintains or increases its size or mass or its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth or development of symbiont in host (obsolete GO:0033666)","synonyms":[{"name":"positive regulation of growth or development of symbiont in host","type":"exact"},{"name":"positive regulation of growth or development of symbiont within host","type":"exact"},{"name":"positive regulation of invasive growth","type":"broad"},{"name":"up regulation of growth or development of organism within host","type":"exact"},{"name":"up-regulation of growth or development of organism within host","type":"exact"},{"name":"upregulation of growth or development of organism within host","type":"exact"}],"termid":"GO:0033666"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: MONDO:0012396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exercise-induced hyperinsulinism (EIHI) is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI) characterized by episodes of hypoglycemia induced by exercise due to an inappropriate lactate and pyruvate sensitivity in pancreatic beta-cells.","definition_xrefs":["Orphanet:165991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"exercise-induced hyperinsulinism","secondary_identifiers":["MESH:C538376","GARD:9932","UMLS:C1864902","MEDGEN:351246","NCIT:C131839","icd11.foundation:999935139","OMIM:610021","SCTID:715830008","DOID:0070214"],"synonyms":[{"name":"EIHI","type":"exact"},{"name":"HHF7","type":"related"},{"name":"MCT1 hyperinsulinism","type":"exact"},{"name":"exercise induced hyperinsulinemic hypoglycemia","type":"related"},{"name":"exercise-induced hyperinsulinemic hypoglycemia","type":"exact"},{"name":"hyperinsulinemic hypoglycemia exercise-induced","type":"related"},{"name":"hyperinsulinemic hypoglycemia familial 7","type":"related"},{"name":"hyperinsulinemic hypoglycemia, exercise-induced","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 7","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, type 7","type":"exact"},{"name":"hyperinsulinism due to SLC16A1 deficiency","type":"exact"},{"name":"hyperinsulinism due to monocarboxylate transporter 1 deficiency","type":"exact"},{"name":"monocarboxylate transporter 1 hyperinsulinism","type":"exact"}],"termid":"MONDO:0012396","xrefs":{"Monarch":{"xref_id":"0012396"}}}


id: GO:1902597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication origin binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:11850415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA replication origin binding","synonyms":[{"name":"activation of ARS binding","type":"narrow"},{"name":"activation of DNA replication origin binding","type":"narrow"},{"name":"positive regulation of ARS binding","type":"narrow"},{"name":"up regulation of ARS binding","type":"narrow"},{"name":"up regulation of DNA replication origin binding","type":"exact"},{"name":"up-regulation of ARS binding","type":"narrow"},{"name":"up-regulation of DNA replication origin binding","type":"exact"},{"name":"upregulation of ARS binding","type":"narrow"},{"name":"upregulation of DNA replication origin binding","type":"exact"}],"termid":"GO:1902597"}


id: MONDO:0850271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute megakaryocytic leukemia occurring in children with Down syndrome and that has material basis in mutation in the GATA1 gene.","definition_xrefs":["DOID:0080798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"myeloid leukemia associated with down syndrome","secondary_identifiers":["NCIT:C43223","MEDGEN:416725","UMLS:C2825149"],"termid":"MONDO:0850271","xrefs":{"Monarch":{"xref_id":"0850271"}}}


id: PBO:0078832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-3","termid":"PBO:0078832"}


id: PBO:0028023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_14-3-3_protein_binding","termid":"PBO:0028023"}


id: GO:0103011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + beta-D-fructofuranose 6-phosphate = mannosylfructose-phosphate + GDP.","definition_xrefs":["GOC:pz","EC:2.4.1.246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannosylfructose-phosphate synthase activity","secondary_identifiers":["RHEA:26039","MetaCyc:RXN-9935"],"termid":"GO:0103011"}


id: MONDO:0009484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 1","secondary_identifiers":["Orphanet:98861","NCIT:C128117","OMIM:244400","UMLS:C4551906","MEDGEN:1646059","DOID:0110594"],"synonyms":[{"name":"CILD1","type":"exact"},{"name":"DNAI1 primary ciliary dyskinesia","type":"exact"},{"name":"Kartagener syndrome","type":"related"},{"name":"PCD","type":"related"},{"name":"Polynesian bronchiectasis","type":"related"},{"name":"Siewert syndrome","type":"related"},{"name":"ciliary dyskinesia, primary, 1","type":"related"},{"name":"ciliary dyskinesia, primary, 1, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 1","type":"exact"},{"name":"dextrocardia, bronchiectasis, and sinusitis","type":"related"},{"name":"immotile cilia syndrome","type":"related"},{"name":"primary ciliary dyskinesia 1","type":"exact"},{"name":"primary ciliary dyskinesia 1 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAI1","type":"exact"},{"name":"primary ciliary dyskinesia type 1","type":"exact"}],"termid":"MONDO:0009484","xrefs":{"Monarch":{"xref_id":"0009484"}}}


id: PBO:0063216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 1","termid":"PBO:0063216"}


id: PBO:0031662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_modification_during_vegetative_growth","termid":"PBO:0031662"}


id: PBO:0034074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_frequency_of_condition","termid":"PBO:0034074"}


id: PR:O14136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19332:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.10","secondary_identifiers":["UniProtKB:O14136"],"synonyms":[{"name":"SPAC3C7.10","type":"related"},{"name":"Spom972h-PEX13","type":"exact"},{"name":"peroxin-13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14136"}


id: PBO:0028837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing","termid":"PBO:0028837"}


id: GO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in the central lymphoid organs: the thymus and bone marrow.","definition_xrefs":["GO_REF:0000022","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central tolerance induction","termid":"GO:0002508"}


id: PBO:0073007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 7","termid":"PBO:0073007"}


id: PBO:0068437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 7, pseudogene","termid":"PBO:0068437"}


id: GO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta2 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-9 complex","synonyms":[{"name":"laminin-421 complex","type":"exact"}],"termid":"GO:0043258"}


id: PBO:0086593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression downregulated by treatment with 8-methoxypsoralen plus UVA irradiation; not an essential gene; YGR273C has a paralog, YMR295C, that arose from the whole genome duplication","termid":"PBO:0086593"}


id: GO:0015192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-phenylalanine from one side of a membrane to the other. L-phenylalanine is 2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-phenylalanine transmembrane transporter activity","synonyms":[{"name":"L-phenylalanine permease activity","type":"exact"},{"name":"L-phenylalanine transporter activity","type":"broad"}],"termid":"GO:0015192"}


id: PBO:0067832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 134","termid":"PBO:0067832"}


id: PBO:0066520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repulsive guidance molecule BMP co-receptor a","termid":"PBO:0066520"}


id: PBO:0062393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 14 pseudogene","termid":"PBO:0062393"}


id: PBO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_decamethylenediguanidine","termid":"PBO:0030265"}


id: GO:0140252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the postsynapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at postsynapse","termid":"GO:0140252"}


id: PBO:0043872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 1","termid":"PBO:0043872"}


id: PR:Q9URV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim11 gene.","definition_xrefs":["UniProtKB:Q9URV6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit e, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.05c","synonyms":[{"name":"ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tim11","type":"exact"},{"name":"translocase of the inner membrane protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URV6"}


id: PATO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatiotemporal quality inhering in a cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular spatiotemporal quality","termid":"PATO:0001529"}


id: MONDO:1012420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, non-human animal","termid":"MONDO:1011961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, sheep","secondary_identifiers":["OMIA:001595-9940"],"termid":"MONDO:1012420","xrefs":{"Monarch":{"xref_id":"1012420"}}}


id: GO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor regulator activity (obsolete GO:0042064)","synonyms":[{"name":"cell adhesion receptor regulator activity","type":"exact"}],"termid":"GO:0042064"}


id: GO:0003253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a neural crest cell from one site to another that will contribute to the morphogenesis of the outflow tract.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"cardiac neural crest cell development involved in outflow tract morphogenesis","termid":"GO:0061309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}


id: MONDO:0008756
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030009"}]},"cv_name":"mondo","definition":"An extremely rare syndrome described in less than 20 families to date and characterized by total or partial alopecia associated with intellectual deficit. The syndrome can be associated with other anomalies such as seizures, sensorineural hearing loss, delayed psychomotor development, and/or hypertonia.","definition_xrefs":["Orphanet:2850"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"is_obsolete":false,"name":"alopecia - intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:203650","MEDGEN:444019","DOID:0080627","SCTID:716191002","UMLS:C2931280","GARD:612"],"synonyms":[{"name":"AMR syndrome 1","type":"related"},{"name":"Amr syndrome","type":"related"},{"name":"Perniola-Krajewska-Carnevale syndrome","type":"exact"},{"name":"alopecia intellectual disbility syndrome 1","type":"related"},{"name":"alopecia with severe intellectual deficit","type":"related"},{"name":"alopecia-intellectual disability syndrome","type":"exact"},{"name":"alopecia-mental retardation syndrome","type":"exact"}],"termid":"MONDO:0008756","terms_by_termid":{"MONDO:0030009":null},"xrefs":{"Monarch":{"xref_id":"0008756"}}}


id: PBO:0059963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 8","termid":"PBO:0059963"}


id: FYPO:0004537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling does not occur. As a result, the septation initiation network (SIN) signaling pathway is activated despite activation of the mitotic spindle assembly checkpoint (SAC). Normally, under conditions that activate the SAC, SIN activation is inhibited and the cell cycle arrests in anaphase. In this phenotype, premature SIN activation leads to premature cytokinesis and the formation of cut cells.","definition_xrefs":["PMID:11952833","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"FYPO:0004536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint override","synonyms":[{"name":"SIN activation in presence of active mitotic SAC","type":"exact"},{"name":"abolished response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"mitotic SAC override","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint override","type":"exact"},{"name":"septation initiation signaling activation in presence of active mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0004537"}


id: PBO:0026806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026806"}


id: PR:Q9US49
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ecdysoneless that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13060:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ecdysoneless homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.10c","secondary_identifiers":["UniProtKB:Q9US49"],"synonyms":[{"name":"SPAC1002.10c","type":"related"},{"name":"Spom972h-ECD","type":"exact"}],"termid":"PR:Q9US49"}


id: MONDO:0031040
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86238],"is_not":false,"summary":null,"term":"MONDO:0031040"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824084","OMIM:620010","UMLS:C5774311"],"synonyms":[{"name":"PFIC12","type":"exact"},{"name":"cholestasis, isolated low-ggt","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 12","type":"exact"}],"termid":"MONDO:0031040","terms_by_termid":{"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0031040"}}}


id: PBO:0004980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.8S ribosomal RNA","termid":"PBO:0004980"}


id: MONDO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A senile cataract that involves the lens cortex.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cortical cataract","termid":"MONDO:0045051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cortical senile cataract","secondary_identifiers":["SCTID:78875003","UMLS:C0154980","MEDGEN:509748","DOID:13574","ICD9:366.15"],"synonyms":[{"name":"cortical senile cataract","type":"exact"},{"name":"lens cortex senile cataract","type":"exact"},{"name":"senile cataract of lens cortex","type":"exact"}],"termid":"MONDO:0001749","xrefs":{"Monarch":{"xref_id":"0001749"}}}


id: PBO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member B, pseudogene","termid":"PBO:0047083"}


id: PBO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p150-Glued","termid":"PBO:0002570"}


id: GO:0046404
data:
  {"annotated_genes":["SJAG_01979","SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71148,88481],"is_not":false,"summary":null,"term":"GO:0046404"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA.","definition_xrefs":["RHEA:15669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-5-HYDROXYL-KINASE-RXN","KEGG_REACTION:R03840"],"synonyms":[{"name":"ATP-dependent DNA kinase activity","type":"exact"},{"name":"polydeoxyribonucleotide 5'-hydroxyl-kinase activity","type":"broad"}],"termid":"GO:0046404","terms_by_termid":{"GO:0046404":null}}


id: GO:0033584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate L-arogenate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via L-arogenate","secondary_identifiers":["MetaCyc:PWY-3461"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine formation from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via L-arogenate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via L-arogenate","type":"broad"}],"termid":"GO:0033584"}


id: MONDO:0005325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the radius bone in which the continuity of the bone is broken.","definition_xrefs":["EFO:0003957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radius fracture","secondary_identifiers":["SCTID:12676007","MESH:D011885"],"termid":"MONDO:0005325","xrefs":{"Monarch":{"xref_id":"0005325"}}}


id: FYPO:0006405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the meiotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented meiotic spindle pole body","synonyms":[{"name":"fragmented meiotic SPB","type":"exact"},{"name":"fragmented spindle pole body during meiotic cell cycle","type":"exact"},{"name":"meiotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0006405"}


id: MONDO:0001898
data:
  {"annotated_genes":["SJAG_02063","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[87421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"}]},"cv_name":"mondo","definition":"A disease involving the optic choroid.","direct_ancestors":[{"relation_name":"is_a","term_name":"uveal disorder","termid":"MONDO:0002661"},{"relation_name":"is_a","term_name":"ocular vascular disorder","termid":"MONDO:0005552"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_02063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"optic choroid disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:363.9","MEDGEN:892839","ICD9:363.8","SCTID:128468007","DOID:1417","MESH:D015862","NCIT:C34468","UMLS:C4025836"],"synonyms":[{"name":"choroid disease","type":"related"},{"name":"choroid disorder","type":"exact"},{"name":"disease of optic choroid","type":"exact"},{"name":"disease or disorder of optic choroid","type":"exact"},{"name":"disorder of optic choroid","type":"exact"},{"name":"optic choroid disease","type":"exact"},{"name":"optic choroid disease or disorder","type":"exact"}],"termid":"MONDO:0001898","terms_by_termid":{"MONDO:0009796":null,"MONDO:0010557":null},"xrefs":{"Monarch":{"xref_id":"0001898"}}}


id: PBO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 2","termid":"PBO:0060372"}


id: PBO:0079593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D4 (putative)","termid":"PBO:0079593"}


id: PBO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase family Scn1","termid":"PBO:0001902"}


id: PBO:0056452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 4","termid":"PBO:0056452"}


id: PR:Q9USL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04432","PANTHER:PTHR22839:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C18B5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.10c","secondary_identifiers":["UniProtKB:Q9USL1"],"synonyms":[{"name":"Spom972h-THOC3","type":"exact"}],"termid":"PR:Q9USL1"}


id: FYPO:0002090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during nuclear division, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"lagging chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging chromosomes","type":"exact"}],"termid":"FYPO:0002090"}


id: GO:0071652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"regulation of CCL1 production","type":"exact"},{"name":"regulation of T cell activation 3 production","type":"exact"},{"name":"regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071652"}


id: GO:0019327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of lead sulfide to lead sulfate.","definition_xrefs":["MetaCyc:P301-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"lead sulfide oxidation","synonyms":[{"name":"lead sulphide oxidation","type":"exact"},{"name":"oxidation of galena","type":"exact"},{"name":"oxidation of lead sulfide","type":"exact"}],"termid":"GO:0019327"}


id: GO:0060948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac vascular smooth muscle cell over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell development","termid":"GO:0097084"},{"relation_name":"part_of","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac vascular smooth muscle cell development","synonyms":[{"name":"heart vascular smooth muscle cell development","type":"exact"}],"termid":"GO:0060948"}


id: MONDO:0017013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 8p is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 8, with highly variable phenotype ranging from no dysmorphic features and only mild intellectual disability to patients with severe developmental delay, neonatal hypotonia, short stature, profound intellectual disability, mild dysmorphic features (e.g. mild ptosis, hypertelorism, down-slanting palpebral fissures, broad nasal bridge, short, prominent philtrum, abnormal dentition) and structural brain abnormalities. Autism, epilepsy, and spastic paraplegia have also been reported.","definition_xrefs":["Orphanet:264450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 8","termid":"MONDO:0016945"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 8p","secondary_identifiers":["MESH:C538019","MEDGEN:167072","GARD:20920","UMLS:C0795825"],"synonyms":[{"name":"Duplication 8p","type":"exact"},{"name":"trisomy type 8p","type":"exact"}],"termid":"MONDO:0017013","xrefs":{"Monarch":{"xref_id":"0017013"}}}


id: MONDO:0005045
data:
  {"annotated_genes":["SJAG_00547","SJAG_00993","SJAG_02923","SJAG_02342","SJAG_02785","SJAG_01665","SJAG_03703","SJAG_02536","SJAG_03145","SJAG_03126","SJAG_03077","SJAG_01181","SJAG_03453","SJAG_02431","SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[85389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[85390,85392,85391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[85395,85396,85397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[86058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[85532,85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[86810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[86572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[86819,86820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[85705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[86815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[87620,87618,87619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[86138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[87008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85877,85876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.","definition_xrefs":["NCIT:C34449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01665":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10020871","ICD10CM:I42.1","ICD9:425.11","DOID:11984","SCTID:233873004","MESH:D002312","MEDGEN:2881","NANDO:1200286","Orphanet:217569","NANDO:2200229","icd11.foundation:1830681485","NANDO:1200288","EFO:0000538","HP:0001639","NANDO:2100054","NANDO:2201042","UMLS:C0007194","ICD9:425.4","ICD9:425.1","ICD10CM:I42.2"],"synonyms":[{"name":"HCM - hypertrophic cardiomyopathy","type":"related"},{"name":"familial hypertrophic cardiomyopathy","type":"narrow"},{"name":"hypertrophic cardiomyopathy","type":"exact"},{"name":"hypertrophic obstructive cardiomyopathy","type":"exact"},{"name":"hypertrophic subaortic stenosis","type":"exact"},{"name":"obstructive hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0005045","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008647":null,"MONDO:0009026":null,"MONDO:0010946":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005045"}}}


id: GO:0071817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the proteins MMS19, MIP18 and XPD, localizes to mitotic spindle during mitosis, and is required for proper chromosome segregation.","definition_xrefs":["PMID:20797633","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MMXD complex","synonyms":[{"name":"MMS19-MIP18-XPD complex","type":"exact"}],"termid":"GO:0071817"}


id: GO:0007447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas of the imaginal disc that will undergo specific cell differentaiton. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc pattern formation","termid":"GO:0007447"}


id: PBO:0027777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_actomyosin_contractile_ring_contraction","termid":"PBO:0027777"}


id: MONDO:0004616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful blister of the periungual skin that is caused by herpes simplex virus type 1 or 2.","definition_xrefs":["NCIT:C128402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"paronychia","termid":"MONDO:0005898"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"herpetic whitlow","secondary_identifiers":["DOID:8607","SCTID:43891009","UMLS:C0153042","MEDGEN:509122","ICD9:054.6"],"synonyms":[{"name":"Simplexvirus caused paronychia (disease)","type":"exact"},{"name":"Simplexvirus paronychia (disease)","type":"exact"},{"name":"herpetic felon","type":"exact"}],"termid":"MONDO:0004616","xrefs":{"Monarch":{"xref_id":"0004616"}}}


id: MONDO:0100248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subset of primary central nervous system vasculitis where disease is rapidly progressive after onset that is characterized by bilateral, multiple, large cerebral vessel lesions and multiple CNS infarctions.","definition_xrefs":["PMID:20959356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system vasculitis","termid":"MONDO:0015374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapidly progressive primary central nervous system vasculitis","synonyms":[{"name":"rapidly progressive PCNSV","type":"exact"}],"termid":"MONDO:0100248","xrefs":{"Monarch":{"xref_id":"0100248"}}}


id: PBO:0043701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 7","termid":"PBO:0043701"}


id: PBO:0065000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM6 antisense RNA 1","termid":"PBO:0065000"}


id: GO:0099130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an estrogen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"estrogen binding","termid":"GO:0099130"}


id: PBO:0028794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Argonaute-associated_RNA_length","termid":"PBO:0028794"}


id: PBO:0114114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex WD repeat subunit Spt8","termid":"PBO:0114114"}


id: MONDO:0850451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute biphenotypic leukemia that is characterized by blasts which express B-lymphoid and myeloid lineage markers but are negative for MLL translocation and t(9;22)(q34;q11.2) translocation.","definition_xrefs":["DOID:0081038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute biphenotypic leukemia","termid":"MONDO:0020322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"mixed phenotype acute leukemia, B/myeloid","secondary_identifiers":["UMLS:C3472616","NCIT:C82212","MEDGEN:501146"],"termid":"MONDO:0850451","xrefs":{"Monarch":{"xref_id":"0850451"}}}


id: GO:0071065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular cell adhesion molecule-1.","definition_xrefs":["PMID:10209034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex","synonyms":[{"name":"ITGA9-ITGB1-VCAM1 complex","type":"narrow"}],"termid":"GO:0071065"}


id: PBO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor IF-2Mt (predicted)","termid":"PBO:0003140"}


id: PBO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 8","termid":"PBO:0071644"}


id: MONDO:0011644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disorder of the cilliary body in the uvea that affects healthy, younger individuals who are often asymptomatic. It has a long clinical course with relapses and remissions. Symptoms include mildly decreased vision and floaters. It may be associated with autoimmune disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body disorder","termid":"MONDO:0002970"},{"relation_name":"is_a","term_name":"chorioretinitis","termid":"MONDO:0004674"},{"relation_name":"is_a","term_name":"intermediate uveitis","termid":"MONDO:0006806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pars planitis","secondary_identifiers":["ICD9:363.21","MESH:D015868","EFO:1001088","DOID:12731","GARD:7339","OMIM:606177","icd11.foundation:127977237","MedDRA:10034052","MEDGEN:14623","NCIT:C34903","SCTID:314428001","UMLS:C0030593"],"synonyms":[{"name":"familial pars planitis (subtype)","type":"related"},{"name":"inflammation of pars plana of ciliary body","type":"exact"},{"name":"pars plana of ciliary body inflammation","type":"exact"},{"name":"pars plana of ciliary bodyitis","type":"exact"},{"name":"pars planitis","type":"exact"},{"name":"peripheral retinal inflammation","type":"related"},{"name":"posterior cyclitis","type":"exact"}],"termid":"MONDO:0011644","xrefs":{"Monarch":{"xref_id":"0011644"}}}


id: PATO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light orange","termid":"PATO:0001255"}


id: PBO:0049278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 1","termid":"PBO:0049278"}


id: MONDO:0012670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the LRTOMT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 63","secondary_identifiers":["GARD:22627","DOID:0110515","MEDGEN:409872","MESH:C566951","OMIM:611451","UMLS:C1969621"],"synonyms":[{"name":"DFNB63","type":"narrow"},{"name":"LRTOMT autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 63","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 63","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in LRTOMT","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 63","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 63","type":"exact"},{"name":"deafness, autosomal recessive 63","type":"narrow"},{"name":"deafness, autosomal recessive type 63","type":"narrow"}],"termid":"MONDO:0012670","xrefs":{"Monarch":{"xref_id":"0012670"}}}


id: RO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"},{"relation_name":"is_a","term_name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"RO:0002326"}


id: GO:0006217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxycytidine metabolic process","termid":"GO:0046092"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxycytidine catabolic process","synonyms":[{"name":"deoxycytidine breakdown","type":"exact"},{"name":"deoxycytidine catabolism","type":"exact"},{"name":"deoxycytidine degradation","type":"exact"}],"termid":"GO:0006217"}


id: PBO:0083943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl kinase; catalyzes the first step in proline biosynthesis; required for nitrogen starvation-induced ribophagy but not for nonselective autophagy; PRO1 has a paralog, YHR033W, that arose from the whole genome duplication","termid":"PBO:0083943"}


id: GO:0030489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete processing of 27S pre-rRNA (obsolete GO:0030489)","synonyms":[{"name":"processing of 27S pre-rRNA","type":"exact"}],"termid":"GO:0030489"}


id: GO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond between peptides. Peptides are compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide stabilization activity (obsolete GO:0048191)","synonyms":[{"name":"peptide stabilization activity","type":"exact"}],"termid":"GO:0048191"}


id: GO:1990960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of basophils such that the total number of basophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil homeostasis","synonyms":[{"name":"basophilic leucocyte homeostasis","type":"exact"}],"termid":"GO:1990960"}


id: PR:O42998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A HEAT repeat-containing protein 5B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof6 interactor protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.08","secondary_identifiers":["UniProtKB:O42998"],"synonyms":[{"name":"Spom972h-HEATR5B","type":"exact"}],"termid":"PR:O42998"}


id: GO:0140576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ascorbate at the level of a cell.","definition_xrefs":["PMID:17068337","PMID:32547589","PMID:1623014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascorbate homeostasis","synonyms":[{"name":"cellular ascorbate homeostasis","type":"narrow"}],"termid":"GO:0140576"}


id: MONDO:0019252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other metabolic disease with skin involvement (obsolete MONDO:0019252)","secondary_identifiers":["Orphanet:79217"],"termid":"MONDO:0019252","xrefs":{"Monarch":{"xref_id":"0019252"}}}


id: FYPO:0002397
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal cytoskeleton organization","termid":"FYPO:0000802"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_04522"],"name":"abnormal cytoskeleton","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703","SJAG_04522","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","for3delta","rga4delta"],"synonyms":[{"name":"abnormal cytoskeleton physical object quality","type":"exact"}],"termid":"FYPO:0002397","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0012532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_commitment_to","termid":"PBO:0012532"}


id: PBO:0027085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone_during_anaphase_A","termid":"PBO:0027085"}


id: PBO:0070251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 194 pseudogene","termid":"PBO:0070251"}


id: GO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + NADP+ = D-glucurono-3,6-lactone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.20","RHEA:18925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronolactone reductase activity","secondary_identifiers":["KEGG_REACTION:R03183","MetaCyc:GLUCURONOLACTONE-REDUCTASE-RXN"],"termid":"GO:0047941"}


id: MONDO:0011629
data:
  {"annotated_genes":["SJAG_04363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86946],"is_not":false,"summary":null,"term":"MONDO:0011629"}]},"cv_name":"mondo","definition":"MOGS-CDG is a form of congenital disorders of N-linked glycosylation characterized by generalized hypotonia, craniofacial dysmorphism (prominent occiput, short palpebral fissures, long eyelashes, broad nose, high arched palate , retrognathia), hypoplastic genitalia, seizures, feeding difficulties, hypoventilation, severe hypogammaglobulinemia with generalized edema, and increased resistance to particular viral infections (particularly to enveloped viruses). The disease is caused by loss-of-function mutations in the gene MOGS (2p13.1).","definition_xrefs":["Orphanet:79330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"MOGS-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:342954","SCTID:725028009","MESH:C565264","UMLS:C1853736","DOID:0070254","GARD:10767","OMIM:606056"],"synonyms":[{"name":"CDG 2B","type":"related"},{"name":"CDG IIb","type":"related"},{"name":"CDG syndrome type IIb","type":"exact"},{"name":"CDG-IIb","type":"exact"},{"name":"CDG2B","type":"exact"},{"name":"GCS1-CDG","type":"related"},{"name":"MOGS-CDG","type":"exact"},{"name":"MOGS-CDG (CDG-IIb)","type":"related"},{"name":"MOGS-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIb","type":"exact"},{"name":"congenital disorder of glycosylation type 2b","type":"exact"},{"name":"congenital disorder of glycosylation type IIb","type":"exact"},{"name":"congenital disorder of glycosylation, type IIb","type":"related"},{"name":"glucosidase 1 deficiency","type":"exact"}],"termid":"MONDO:0011629","terms_by_termid":{"MONDO:0011629":null},"xrefs":{"Monarch":{"xref_id":"0011629"}}}


id: MONDO:0009218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sphingolipid disorder characterized by a spectrum of clinical signs ranging from the classical triad of painful and progressively deformed joints, subcutaneous nodules, and progressive hoarseness (due to laryngeal involvement) that presents in infancy, to varying phenotypes with respiratory and neurologic involvement.","definition_xrefs":["Orphanet:333"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"ASAH1-related sphingolipidosis","termid":"MONDO:0100524"},{"relation_name":"is_a","term_name":"ASAH1-related disorders","termid":"MONDO:0800460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"Farber lipogranulomatosis","secondary_identifiers":["MEDGEN:78654","DOID:0050464","ICD9:272.8","NCIT:C84710","SCTID:79935000","GARD:6426","MESH:D055577","NANDO:2200565","NANDO:1200086","UMLS:C0268255","OMIM:228000"],"synonyms":[{"name":"AC deficiency","type":"related"},{"name":"FRBRL","type":"related"},{"name":"Farber disease","type":"exact"},{"name":"Farber lipogranulomatosis","type":"exact"},{"name":"Farber's disease","type":"related"},{"name":"N-LAURYLSPHINGOSINE deacylase deficiency","type":"exact"},{"name":"N-Laurylsphingosine deacylase deficiency","type":"related"},{"name":"acid ceramidase deficiency","type":"exact"},{"name":"ceramidase deficiency","type":"related"}],"termid":"MONDO:0009218","xrefs":{"Monarch":{"xref_id":"0009218"}}}


id: MONDO:0958235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ullrich congenital muscular dystrophy","termid":"MONDO:0000355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy 1B","secondary_identifiers":["MEDGEN:1859300","OMIM:620727","DOID:0060942","UMLS:C5935582"],"termid":"MONDO:0958235","xrefs":{"Monarch":{"xref_id":"0958235"}}}


id: GO:0008733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose = L-ribulose.","definition_xrefs":["EC:5.3.1.4","RHEA:14821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"L-arabinose isomerase activity","secondary_identifiers":["KEGG_REACTION:R01761","MetaCyc:ARABISOM-RXN"],"synonyms":[{"name":"L-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"L-arabinose ketol-isomerase activity","type":"related"}],"termid":"GO:0008733"}


id: PBO:0080560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 11","termid":"PBO:0080560"}


id: PBO:0087586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087586"}


id: PBO:0053805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1063","termid":"PBO:0053805"}


id: MOD:00406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d0 reagent.","definition_xrefs":["Unimod:13#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d0","type":"related"},{"name":"ICAT-D","type":"related"}],"termid":"MOD:00406"}


id: GO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate = 2-dehydro-3-deoxy-6-phospho-D-gluconate + H2O.","definition_xrefs":["EC:4.2.1.12","RHEA:17277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphogluconate dehydratase activity","secondary_identifiers":["MetaCyc:PGLUCONDEHYDRAT-RXN","KEGG_REACTION:R02036"],"synonyms":[{"name":"6-phospho-D-gluconate hydro-lyase (2-dehydro-3-deoxy-6-phospho-D-gluconate-forming)","type":"related"},{"name":"6-phospho-D-gluconate hydro-lyase activity","type":"related"},{"name":"6-phosphogluconate dehydrase activity","type":"related"},{"name":"6-phosphogluconate dehydratase activity","type":"related"},{"name":"6-phosphogluconic dehydrase activity","type":"related"},{"name":"gluconate 6-phosphate dehydratase activity","type":"related"},{"name":"gluconate-6-phosphate dehydratase activity","type":"related"}],"termid":"GO:0004456"}


id: PBO:0051162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-43","termid":"PBO:0051162"}


id: FYPO:0005422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and elongated, has a nucleus that is broken into multiple small fragments, and progression through the mitotic cell cycle is arrested in interphase during a cellular response to ultraviolet light. The cell contains no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated cell with fragmented nucleus and mitotic cell cycle arrest in interphase","termid":"FYPO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002403","FYPO:0000004","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","synonyms":[{"name":"elongated inviable cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with fragmented nucleus and cell cycle arrest in mitotic interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented nuclear DNA and mitotic cell cycle arrest in interphase during cellular response to UV","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus and cell cycle arrest in interphase during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented nucleus and mitotic interphase arrest during cellular response to UV","type":"exact"},{"name":"lethal; elongated vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"mitotic cell cycle arrest in interphase and elongated inviable cell with fragmented nucleus during cellular response to UV","type":"exact"},{"name":"mitotic interphase arrested elongated inviable vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005422"}


id: PBO:0076504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 4","termid":"PBO:0076504"}


id: MONDO:0007184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"androgenetic alopecia","termid":"MONDO:0005339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia, androgenetic, 1","secondary_identifiers":["UMLS:C4049090","OMIM:109200","MEDGEN:886756"],"synonyms":[{"name":"AGA1","type":"exact"},{"name":"alopecia, androgenetic, 1","type":"exact"},{"name":"baldness, Male pattern","type":"related"}],"termid":"MONDO:0007184","xrefs":{"Monarch":{"xref_id":"0007184"}}}


id: FYECO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping starvation and timing","termid":"FYECO:0000239"}


id: FYPO:0001728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular serine level","synonyms":[{"name":"increased cellular L-serine level","type":"exact"},{"name":"increased cellular serine level during mitotic cell cycle","type":"related"},{"name":"increased cellular serine level during vegetative growth","type":"exact"},{"name":"increased serine accumulation","type":"related"}],"termid":"FYPO:0001728"}


id: PBO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med17","termid":"PBO:0018281"}


id: MONDO:1011984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal and skeletal dysplasia, non-human animal","secondary_identifiers":["OMIA:001182"],"termid":"MONDO:1011984","xrefs":{"Monarch":{"xref_id":"1011984"}}}


id: PBO:0077519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 234","termid":"PBO:0077519"}


id: MONDO:0022510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlanto-axial fusion","secondary_identifiers":["MESH:C538196"],"synonyms":[{"name":"atlantoaxial fusion","type":"related"},{"name":"atlantoaxial joint fusion","type":"related"}],"termid":"MONDO:0022510","xrefs":{"Monarch":{"xref_id":"0022510"}}}


id: PBO:0079107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 2","termid":"PBO:0079107"}


id: PBO:0050448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U like 2","termid":"PBO:0050448"}


id: PBO:0087561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex; role in proteolysis of spindle positioning protein Kar9, DNA repair proteins Rad52p and Rad57p; stimulated by SUMO-modified substrates; contains a C-terminal RING domain; forms nuclear foci upon DNA replication stress; required for maintenance of genome integrity like human ortholog RNF","termid":"PBO:0087561"}


id: GO:0031273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pseudopodium assembly","termid":"GO:0031272"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"negatively_regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of pseudopodium assembly","synonyms":[{"name":"down regulation of pseudopodium formation","type":"related"},{"name":"down-regulation of pseudopodium formation","type":"related"},{"name":"downregulation of pseudopodium formation","type":"related"},{"name":"inhibition of pseudopodium formation","type":"narrow"},{"name":"negative regulation of pseudopodium formation","type":"related"}],"termid":"GO:0031273"}


id: PBO:0086486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ortholog of human ETF-dH; found in a large supramolecular complex with other mitochondrial dehydrogenases; may have a role in oxidative stress response; ETF-dH is also known as electron transfer flavoprotein dehydrogenase","termid":"PBO:0086486"}


id: PBO:0067001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 5, pseudogene","termid":"PBO:0067001"}


id: PBO:0113347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ethanol metabolism; induced by heat shock and localized to the inner mitochondrial membrane; lysine auxotroph proposed to function in pyrimidine metabolism; homologous to mammalian peroxisomal membrane protein Mpv17; human homolog MPV17 is implicated in hepatocerebral mtDNA depletion syndromes (MDDS), and complements yeast null mutant","termid":"PBO:0113347"}


id: MONDO:0010511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bilateral absence of vas deferens","termid":"MONDO:0018801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vas deferens, congenital bilateral aplasia of, X-linked","secondary_identifiers":["UMLS:C4310815","GARD:15279","DOID:0111863","MEDGEN:934782","OMIM:300985"],"synonyms":[{"name":"CBAVDX","type":"exact"},{"name":"congenital bilateral absence of vas deferens, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked; CBAVDX","type":"exact"}],"termid":"MONDO:0010511","xrefs":{"Monarch":{"xref_id":"0010511"}}}


id: PBO:0065442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 1","termid":"PBO:0065442"}


id: PBO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 family phosphatase Ibp1, unknown role, implicated in DNA replication","termid":"PBO:0090547"}


id: PBO:0046618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group V member 1, envelope","termid":"PBO:0046618"}


id: MONDO:0850284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is triggered by an allergen and that is characterized by an immune system overreaction to a harmless substance, such as pollen or dust, with the subsequent release of immunoglobin E (IgE) antibodies.","definition_xrefs":["DOID:0080811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extrinsic asthma","termid":"MONDO:0850284","xrefs":{"Monarch":{"xref_id":"0850284"}}}


id: PBO:0070606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 74","termid":"PBO:0070606"}


id: PR:O74965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13227:SF5","OMA:SCHPO03697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.04","secondary_identifiers":["UniProtKB:O74965"],"synonyms":[{"name":"Spom972h-EIF2A","type":"exact"},{"name":"eIF-2A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74965"}


id: PR:O74468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A siroheme synthase cysG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III C-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.06c","secondary_identifiers":["UniProtKB:O74468"],"synonyms":[{"name":"Spom972h-cysG","type":"exact"}],"termid":"PR:O74468"}


id: GO:0097502
data:
  {"annotated_genes":["SJAG_04053","SJAG_01264","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93396,101905,106341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment of a mannose residue to a substrate molecule.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097502","terms_by_termid":{"GO:0035269":null}}


id: GO:0002769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a natural killer cell capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["PMID:15771571","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"natural killer cell inhibitory signaling pathway","synonyms":[{"name":"Ly49 inhibitory receptor signaling pathway","type":"related"},{"name":"NK cell inhibitory signaling pathway","type":"exact"},{"name":"inhibitory KIR signaling pathway","type":"narrow"},{"name":"killer cell inhibitory receptor signaling pathway","type":"narrow"},{"name":"natural killer cell inhibitory signalling pathway","type":"exact"}],"termid":"GO:0002769"}


id: GO:0044063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a host neurophysiological process, an organ system process carried out by any of the organs or tissues of neurological system.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host nervous system process (obsolete GO:0044063)","synonyms":[{"name":"modulation by symbiont of host neurological system process","type":"exact"},{"name":"regulation by symbiont of host neurological system process","type":"exact"}],"termid":"GO:0044063"}


id: MONDO:1012971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disturbances in growth processes leading to reduced height in non-human animals.","definition_xrefs":["PMID:28697878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, non-human animal","termid":"MONDO:1012971","xrefs":{"Monarch":{"xref_id":"1012971"}}}


id: FYPO:0003090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0000641"],"is_obsolete":false,"name":"decreased replication fork arrest at rDNA repeats","synonyms":[{"name":"decreased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"decreased replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"reduced replication fork arrest at rDNA repeats","type":"exact"}],"termid":"FYPO:0003090"}


id: FYPO:0005072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is normal (i.e. indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"},{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to centromeric chromatin","synonyms":[{"name":"normal protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere","type":"exact"}],"termid":"FYPO:0005072"}


id: GO:0016056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that starts with an opsin being activated by a photon, and ending with the light signal being trasmitted through the synapses. The signal can be transmitted via different Galpha subunits types: Go, Gs, Gq, and Gt.","definition_xrefs":["GOC:bf","GOC:hb","PMID:19720651","GOC:signaling","PMID:36272560","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"},{"relation_name":"part_of","term_name":"phototransduction, visible light","termid":"GO:0007603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled opsin signaling pathway","secondary_identifiers":["Reactome:R-HSA-2514856","GO:0009586"],"synonyms":[{"name":"G protein-mediated opsin signaling pathway","type":"exact"},{"name":"rhodopsin mediated phototransduction","type":"exact"},{"name":"rhodopsin mediated signaling pathway","type":"broad"},{"name":"rhodopsin mediated signalling pathway","type":"exact"},{"name":"rhodopsin signaling","type":"exact"}],"termid":"GO:0016056"}


id: PBO:0066365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 8","termid":"PBO:0066365"}


id: PBO:0086363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase","termid":"PBO:0086363"}


id: MONDO:1012330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laminitis, non-human animal","termid":"MONDO:1011767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, horse","secondary_identifiers":["OMIA:001225-9796"],"termid":"MONDO:1012330","xrefs":{"Monarch":{"xref_id":"1012330"}}}


id: PBO:0038999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFAP1 antisense RNA 1","termid":"PBO:0038999"}


id: GO:1901784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cresol.","definition_xrefs":["PMID:10623531","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol metabolic process","synonyms":[{"name":"p-cresol metabolism","type":"exact"}],"termid":"GO:1901784"}


id: PBO:0073735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 3","termid":"PBO:0073735"}


id: PBO:0073705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI3 subunit of superkiller complex","termid":"PBO:0073705"}


id: GO:0140720
data:
  {"annotated_genes":["SJAG_03418","SJAG_02119","SJAG_03042","SJAG_02401","SJAG_03982","SJAG_03680","SJAG_03997","SJAG_03844","SJAG_00302","SJAG_00335","SJAG_04574","SJAG_04186","SJAG_03543","SJAG_03664","SJAG_02621","SJAG_01601","SJAG_00756","SJAG_03945","SJAG_01579","SJAG_00678","SJAG_01540","SJAG_03356","SJAG_03916","SJAG_03685","SJAG_01046","SJAG_02778"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91279,91628,92430,94190,94438,96516,97082,99474,99921,103588,104451,104549,110868,112494,112598,112998,112999,113000,113679,114373,116331,117514,118086,118144,118485,119209],"is_not":false,"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the telomere, and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:34576871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, subtelomeric region","termid":"GO:0099115"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_01046":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02621":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"subtelomeric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140720","terms_by_termid":{"GO:0140720":null}}


id: FYPO:0006240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is decreased during a cellular response to DNA damage.","definition_xrefs":["PMID:28806726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic DNA replication elongation","termid":"FYPO:0003923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of mitotic DNA replication elongation during cellular response to DNA damage","synonyms":[{"name":"decreased rate of DNA replication elongation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased rate of DNA strand elongation involved in mitotic DNA replication during cellular response to DNA damage","type":"exact"},{"name":"decreased rate of DNA strand elongation involved in nuclear cell cycle DNA replication during cellular response to DNA damage","type":"exact"},{"name":"decreased rate of mitotic DNA replication elongation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced rate of mitotic DNA replication elongation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0006240"}


id: PBO:0055134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2553","termid":"PBO:0055134"}


id: GO:1904983
data:
  {"annotated_genes":["SJAG_00626","SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70340,98581],"is_not":false,"summary":null,"term":"GO:1904983"}]},"cv_name":"biological_process","definition":"The process in which glycine is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GO_REF:0000078","GOC:TermGenie","PMID:26821380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"glycine transport","termid":"GO:0015816"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"glycine import into mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"transmembrane glycine transport from cytosol to mitochondrion","type":"exact"}],"termid":"GO:1904983","terms_by_termid":{"GO:1904983":null}}


id: SO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is increased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_polyadenylation_variant","synonyms":[{"name":"increased polyadenylation variant","type":"exact"}],"termid":"SO:0001802"}


id: MONDO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the radial nerve. Clinical features include weakness of elbow extension, elbow flexion, supination of the forearm, wrist and finger extension, and thumb abduction. Sensation may be impaired over regions of the dorsal forearm. Common sites of compression or traumatic injury include the axilla and radial groove of the humerus.","definition_xrefs":["MESH:D020425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial neuropathy","secondary_identifiers":["DOID:12171","SCTID:16644004","MEDGEN:148185","UMLS:C0748226"],"synonyms":[{"name":"peripheral neuropathy of radial nerve","type":"exact"},{"name":"radial nerve peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001459","xrefs":{"Monarch":{"xref_id":"0001459"}}}


id: MONDO:0013162
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87026,87027],"is_not":false,"summary":null,"term":"MONDO:0013162"}]},"cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2N (LGMD2N) is a form of limb-girdle muscular dystrophy characterized by proximal weakness (manifesting as slowness in running) presenting in infancy, along with calf hypertrophy, mild lordosis, scapular winging and normal intelligence or mild intellectual disability.","definition_xrefs":["Orphanet:206559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type C","termid":"MONDO:0000173"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein O-mannosyltransferase 2","termid":"MONDO:0016185"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMT2","termid":"MONDO:0700071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0006025","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2N","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613158","GARD:12539","DOID:0110298","UMLS:C3150418","MEDGEN:461768"],"synonyms":[{"name":"LGMD-POMT2 related","type":"exact"},{"name":"LGMD2N","type":"exact"},{"name":"MDDGC2","type":"exact"},{"name":"POMT2 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in POMT2","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2N","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 2N","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C 2","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 2","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy limb-girdle POMT2-related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, limb-girdle, Pomt2-related","type":"related"}],"termid":"MONDO:0013162","terms_by_termid":{"MONDO:0013162":null},"xrefs":{"Monarch":{"xref_id":"0013162"}}}


id: PBO:0089692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit, SNF2 family ATP-dependent chromatin remodeller Swr1","termid":"PBO:0089692"}


id: PBO:0044535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol lipase beta","termid":"PBO:0044535"}


id: PBO:0027707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_polymerase_processivity_factor_activity","termid":"PBO:0027707"}


id: MONDO:0030690
data:
  {"annotated_genes":["SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87486],"is_not":false,"summary":null,"term":"MONDO:0030690"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, telomere-related, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619767","UMLS:C5676927","MEDGEN:1805650"],"synonyms":[{"name":"PFBMFT6","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, telomere-related, 6","type":"exact"}],"termid":"MONDO:0030690","terms_by_termid":{"MONDO:0030690":null},"xrefs":{"Monarch":{"xref_id":"0030690"}}}


id: GO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body as part of an immune response.","definition_xrefs":["ISBN:0781735149","PMID:7507411","PMID:8600538","GOC:add","PMID:14680625","PMID:14708592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in immune response","synonyms":[{"name":"immune cell migration during immune response","type":"exact"},{"name":"immune cell trafficking during immune response","type":"exact"},{"name":"leucocyte migration during immune response","type":"exact"},{"name":"leucocyte trafficking during immune response","type":"exact"},{"name":"leukocyte trafficking during immune response","type":"exact"}],"termid":"GO:0002522"}


id: PBO:0047167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM193B divergent transcript","termid":"PBO:0047167"}


id: PBO:0052201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 1","termid":"PBO:0052201"}


id: PBO:0117401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 278","termid":"PBO:0117401"}


id: PATO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000857 lordosis reflex value (obsolete PATO:0000857)","termid":"PATO:0000857"}


id: GO:1901146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in mesonephric nephron morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}


id: FYPO:0000240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the size, shape, or structure of invasively growing filaments is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"abnormal filament morphology","synonyms":[{"name":"filament morphology aberrant","type":"exact"}],"termid":"FYPO:0000240"}


id: PBO:0083314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF DAL7/YIR031C","termid":"PBO:0083314"}


id: PBO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain","termid":"PBO:0001140"}


id: GO:1900135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"positively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renin secretion into blood stream","synonyms":[{"name":"activation of renin release into blood stream","type":"narrow"},{"name":"activation of renin secretion into blood stream","type":"narrow"},{"name":"positive regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin secretion into blood stream","type":"exact"},{"name":"up-regulation of renin release into blood stream","type":"exact"},{"name":"up-regulation of renin secretion into blood stream","type":"exact"},{"name":"upregulation of renin release into blood stream","type":"exact"},{"name":"upregulation of renin secretion into blood stream","type":"exact"}],"termid":"GO:1900135"}


id: MONDO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a gall bladder.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gall bladder carcinoma in situ","secondary_identifiers":["UMLS:C0345911","DOID:0050612","MEDGEN:87523","NCIT:C4439"],"synonyms":[{"name":"carcinoma in situ of gall bladder","type":"exact"},{"name":"gall bladder in situ carcinoma","type":"exact"},{"name":"stage 0 gall bladder carcinoma","type":"exact"}],"termid":"MONDO:0000373","xrefs":{"Monarch":{"xref_id":"0000373"}}}


id: GO:1903741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["PMID:22334681","GO_REF:0000059","GOC:rn","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidate phosphatase activity (obsolete GO:1903741)","synonyms":[{"name":"down regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"down-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"downregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"inhibition of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"negative regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903741"}


id: GO:0060518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another contributing to the elongation of the primary prostatic bud.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"primary prostatic bud elongation","termid":"GO:0060516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in prostatic bud elongation","termid":"GO:0060518"}


id: GO:0045055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand.","definition_xrefs":["ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulated exocytosis","synonyms":[{"name":"regulated secretory pathway","type":"exact"}],"termid":"GO:0045055"}


id: MONDO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute pancreatitis (obsolete MONDO:0002458)","termid":"MONDO:0002458","xrefs":{"Monarch":{"xref_id":"0002458"}}}


id: GO:0050065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate = L-alanine + L-allysine.","definition_xrefs":["RHEA:19393","EC:2.6.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"lysine-pyruvate 6-transaminase activity","secondary_identifiers":["KEGG_REACTION:R00453","MetaCyc:LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-lysine:pyruvate aminotransferase activity","type":"related"},{"name":"Lys-AT","type":"related"},{"name":"lysine--pyruvate 6-aminotransferase activity","type":"exact"},{"name":"lysine-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0050065"}


id: GO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Co-chaperones are proteins that bind to chaperones and this complex then folds misfolded proteins. Co-chaperones by themselves do not possess chaperone activity.","definition_xrefs":["GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete co-chaperone activity (obsolete GO:0003767)","synonyms":[{"name":"co-chaperone activity","type":"exact"}],"termid":"GO:0003767"}


id: MONDO:0012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital reticular ichthyosiform erythroderma","secondary_identifiers":["MESH:C563781","MEDGEN:777141","OMIM:609165","Orphanet:281190","icd11.foundation:565254051","SCTID:703504006","GARD:17305","UMLS:C3665704"],"synonyms":[{"name":"Aarau disease","type":"related"},{"name":"CRIE","type":"exact"},{"name":"IWC","type":"exact"},{"name":"erythroderma, ichthyosiform, congenital reticular","type":"related"},{"name":"erythrokeratoderma, reticular","type":"related"},{"name":"ichthyosis variegata","type":"exact"},{"name":"ichthyosis with confetti","type":"exact"}],"termid":"MONDO:0012208","xrefs":{"Monarch":{"xref_id":"0012208"}}}


id: PATO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000352 metabolite composition value (obsolete PATO:0000352)","termid":"PATO:0000352"}


id: FYPO:0004453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to calcium ion","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to calcium ion","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004453"}


id: PBO:0057846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3158-2","termid":"PBO:0057846"}


id: MONDO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic follicular conjunctivitis","secondary_identifiers":["UMLS:C0155147","MEDGEN:509808","SCTID:39429002","DOID:13326","ICD9:372.12"],"termid":"MONDO:0001685","xrefs":{"Monarch":{"xref_id":"0001685"}}}


id: PBO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 66","termid":"PBO:0071225"}


id: GO:0050142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 reduced flavodoxin + 6 H+ + N2 + n ATP = 6 oxidized flavodoxin + 2 NH3 + n ADP + n phosphate.","definition_xrefs":["EC:1.19.6.1","MetaCyc:NITROGENASE-FLAVODOXIN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","termid":"GO:0016738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitrogenase (flavodoxin) activity","secondary_identifiers":["RHEA:15645"],"synonyms":[{"name":"reduced flavodoxin:dinitrogen oxidoreductase (ATP-hydrolysing)","type":"related"}],"termid":"GO:0050142"}


id: PBO:0028002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_mitotic_chromosomes,_with_complete_sister_chromatid_separation","termid":"PBO:0028002"}


id: MOD:00603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 283 is redundant with Unimod 280. Remap to MOD:00600","definition_xrefs":["Unimod:283"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00603 N-ethylation (obsolete MOD:00603)","termid":"MOD:00603"}


id: GO:0032365
data:
  {"annotated_genes":["SJAG_01116","SJAG_03690","SJAG_04413","SJAG_00261","SJAG_00355","SJAG_01437","SJAG_01407","SJAG_01329","SJAG_00176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117905,73931,73273,73717,110000,74650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[62384,72362,77323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_01116":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_03690":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"intracellular lipid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032365","terms_by_termid":{"GO:0032366":null,"GO:0035621":null}}


id: PBO:0026864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation_following_normal_mitosis","termid":"PBO:0026864"}


id: MONDO:0018298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic chronic skeletal disorder characterized by peripheral osteolysis (especially carpal and tarsal bones), interphalangeal joint erosions, subcutaneous fibrocollagenous nodules, facial dysmorphism, and a wide range of associated manifestations.","definition_xrefs":["Orphanet:371428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicentric osteolysis-nodulosis-arthropathy spectrum","secondary_identifiers":["GARD:17610","SCTID:716868003","MEDGEN:342428","UMLS:C1850155"],"synonyms":[{"name":"MONA spectrum","type":"exact"}],"termid":"MONDO:0018298","xrefs":{"Monarch":{"xref_id":"0018298"}}}


id: PBO:0055660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3100","termid":"PBO:0055660"}


id: PBO:0089759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine protein transferase Ate1","termid":"PBO:0089759"}


id: MONDO:0024293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polyposis, gastric, Dos Santos and de Magalhaes 1980 (obsolete MONDO:0024293)","secondary_identifiers":["OMIM:175020"],"termid":"MONDO:0024293","xrefs":{"Monarch":{"xref_id":"0024293"}}}


id: PBO:0065919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit beta","termid":"PBO:0065919"}


id: GO:0085009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via Maurer's cleft. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from Maurer's cleft (obsolete GO:0085009)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from Maurers cleft","type":"exact"}],"termid":"GO:0085009"}


id: PBO:0049338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 3","termid":"PBO:0049338"}


id: PBO:0082813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved E2-like conjugating enzyme; mediates formation of the Atg12p-Atg5p conjugate, which is a critical step in autophagy","termid":"PBO:0082813"}


id: PBO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocyctinuria","termid":"PBO:0001097"}


id: PBO:0063904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Z","termid":"PBO:0063904"}


id: GO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002490"}


id: GO:0042203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products.","definition_xrefs":["UM-BBD_pathwayID:tol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene catabolic process","synonyms":[{"name":"toluene breakdown","type":"exact"},{"name":"toluene catabolism","type":"exact"},{"name":"toluene degradation","type":"exact"}],"termid":"GO:0042203"}


id: GO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane long-chain fatty acid transporter (obsolete GO:0000039)","synonyms":[{"name":"plasma membrane long-chain fatty acid transporter","type":"exact"}],"termid":"GO:0000039"}


id: PATO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting paralytic behaviour when subjected to mechanical shock.","definition_xrefs":["PATOC:flybase"],"direct_ancestors":[{"relation_name":"has_part","term_name":"paralysed","termid":"PATO:0000763"},{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bang sensitive","termid":"PATO:0000759"}


id: PBO:0030379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_staurosporine","termid":"PBO:0030379"}


id: PBO:0087627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; mutant has increased aneuploidy tolerance","termid":"PBO:0087627"}


id: MONDO:0021021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniometaphyseal dysplasia","termid":"MONDO:0015465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniodiaphyseal dysplasia, autosomal dominant","secondary_identifiers":["UMLS:C2675746","DOID:0080807","GARD:249","MEDGEN:382678","OMIM:122860","MESH:C567275"],"synonyms":[{"name":"CDD","type":"exact"},{"name":"Schaefer Stein Oshman syndrome","type":"related"},{"name":"craniodiaphyseal dysplasia, autosomal dominant","type":"exact"},{"name":"craniodiaphyseal dysplasia, dominant","type":"related"},{"name":"dominantly inherited craniodiaphyseal dysplasia","type":"related"}],"termid":"MONDO:0021021","xrefs":{"Monarch":{"xref_id":"0021021"}}}


id: PBO:0003861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA processing (predicted)","termid":"PBO:0003861"}


id: PBO:0111345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein","termid":"PBO:0111345"}


id: GO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase kinase (MAPKKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKKK activity (obsolete GO:0051390)","synonyms":[{"name":"inactivation of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAPKKK activity","type":"exact"}],"termid":"GO:0051390"}


id: FYPO:0005457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell during a cellular response to osmotic stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glycerol level","termid":"FYPO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glycerol level during cellular response to osmotic stress","synonyms":[{"name":"decreased cellular glycerol level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased glycerol accumulation during cellular response to osmotic stress","type":"related"},{"name":"reduced cellular glycerol level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0005457"}


id: PBO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5DC1 pseudogene 1","termid":"PBO:0061558"}


id: PBO:0049957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 3","termid":"PBO:0049957"}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: PBO:0053099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 5A","termid":"PBO:0053099"}


id: PR:O13689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11E3.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11E3.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.10","synonyms":[{"name":"Spom972h-SPAC11E3.10","type":"exact"}],"termid":"PR:O13689"}


id: GO:0097398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-17 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-17","termid":"GO:0097396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-17","synonyms":[{"name":"cellular response to IL-17","type":"exact"}],"termid":"GO:0097398"}


id: PBO:0089659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-T histone fold, kinetochore scaffold protein","termid":"PBO:0089659"}


id: PBO:0051396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 4 (non-functional)","termid":"PBO:0051396"}


id: GO:0022000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the anterior neural ridge to the caudal region of the neural plate that specifies the forebrain fate.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain induction by the anterior neural ridge","termid":"GO:0022000"}


id: PBO:0086243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may act as a chaperone for cytochrome c oxidase subunits; conserved protein; may act as a chaperone in the degradation of misfolded or unassembled cytochrome c oxidase subunits; localized to matrix face of the mitochondrial inner membrane; member of the AAA family but lacks a protease domain","termid":"PBO:0086243"}


id: PBO:0084930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein of the PUF family; binds to specific mRNAs, often in the 3' UTR; has broad specificity and binds to more than 1000 mRNAs (16% of the transcriptome); recruits the CCR4-NOT deadenylase complex to mRNAs along with Dhh1p and Dcp1p to promote deadenylation, decapping, and decay; also interacts with the Caf20p translational initiation repressor, affecting its mRNA target specificity","termid":"PBO:0084930"}


id: GO:0018358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin via S-phytochromobilin-L-cysteine.","definition_xrefs":["RESID:AA0133"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phytochromobilin linkage via S-phytochromobilin-L-cysteine (obsolete GO:0018358)","termid":"GO:0018358"}


id: GO:0102577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-oxopalmitic acid + H+ = 2-pentadecanone + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-palmitate decarboxylase activity (obsolete GO:0102577)","termid":"GO:0102577"}


id: PBO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson's disease","termid":"PBO:0001074"}


id: GO:1900860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of brevianamide F biosynthetic process (obsolete GO:1900860)","synonyms":[{"name":"up regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"up-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"upregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900860"}


id: GO:0003219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a right cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right ventricle formation","termid":"GO:0003219"}


id: MONDO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchymal hamartoma","secondary_identifiers":["UMLS:C0334090","MEDGEN:83108","NCIT:C40427"],"synonyms":[{"name":"mesenchymal hamartoma","type":"exact"}],"termid":"MONDO:0024478","xrefs":{"Monarch":{"xref_id":"0024478"}}}


id: PBO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae BOI2","termid":"PBO:0016098"}


id: PBO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036129"}


id: PBO:0063828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHOX2B antisense RNA 1","termid":"PBO:0063828"}


id: GO:0035558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is passed from the insulin receptor to components of the phosphatidylinositol 3-kinase (PI3K) cascade, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.","definition_xrefs":["GOC:signaling","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase cascade involved in insulin receptor signaling (obsolete GO:0035558)","synonyms":[{"name":"PI3K cascade involved in signaling from the insulin receptor","type":"exact"},{"name":"phosphatidylinositol 3-kinase cascade involved in insulin receptor signaling","type":"exact"},{"name":"phosphatidylinositol 3-kinase cascade involved in insulin receptor signalling","type":"exact"},{"name":"phosphoinositide 3-kinase cascade involved in insulin receptor signaling","type":"exact"},{"name":"phosphoinositide 3-kinase cascade involved in insulin receptor signalling","type":"exact"}],"termid":"GO:0035558"}


id: MOD:00652
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoylated residue","synonyms":[{"name":"O-hexadecanoylated residue","type":"exact"},{"name":"OPamRes","type":"exact"}],"termid":"MOD:00652"}


id: PBO:0049498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 5, pseudogene","termid":"PBO:0049498"}


id: PBO:0085623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in ER-to-Golgi transport; packaged into COPII vesicles for trafficking between ER and Golgi","termid":"PBO:0085623"}


id: PBO:0040404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 5","termid":"PBO:0040404"}


id: PBO:0000661
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.-","termid":"PBO:0000661"}


id: GO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a peptidyl-cystine residue in a protein by the transfer of a sulfur atom from a free cysteine (in the process converting the free cysteine to alanine) to the peptidyl-cysteine to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jsg","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of peptidyl-cystine persulfide by sulphur transfer from free cysteine (obsolete GO:0044526)","termid":"GO:0044526"}


id: GO:0009143
data:
  {"annotated_genes":["SJAG_03797","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009204"},{"annotations":[99347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[79823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside triphosphate breakdown","type":"exact"},{"name":"nucleoside triphosphate catabolism","type":"exact"},{"name":"nucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009143","terms_by_termid":{"GO:0009204":null,"GO:0035863":null,"GO:0046081":null}}


id: MONDO:1011660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"upper digestive tract disorder, non-human animal","termid":"MONDO:1011364"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, non-human animal","secondary_identifiers":["OMIA:000631"],"termid":"MONDO:1011660","xrefs":{"Monarch":{"xref_id":"1011660"}}}


id: PBO:0091212
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0091212"}


id: GO:0018132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["PMID:8895467","RESID:AA0238"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine oxazolecarboxylic acid (obsolete GO:0018132)","termid":"GO:0018132"}


id: PBO:0065008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 12","termid":"PBO:0065008"}


id: MONDO:0009620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Say-Barber-Miller syndrome is characterized by the association of unusual facial features, microcephaly, developmental delay, and severe postnatal growth retardation.","definition_xrefs":["Orphanet:3132"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Say-Barber-Miller syndrome","secondary_identifiers":["MESH:C536618","OMIM:251240","SCTID:721903007","UMLS:C1855078","MEDGEN:343258","GARD:239"],"synonyms":[{"name":"Say Barber Miller syndrome","type":"related"},{"name":"microcephaly hypogammaglobulinemia abnormal immunity","type":"related"},{"name":"microcephaly with chemotactic defect and transient hypogammaglobulinemia","type":"related"},{"name":"microcephaly-hypogammaglobulinemia-abnormal immunity syndrome","type":"exact"}],"termid":"MONDO:0009620","xrefs":{"Monarch":{"xref_id":"0009620"}}}


id: MONDO:0007674
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate dehydrogenase-like","secondary_identifiers":["UMLS:C1414893","MEDGEN:236373","OMIM:138110"],"synonyms":[{"name":"G6PDL","type":"related"},{"name":"glucose-6-phosphate dehydrogenase-like","type":"exact"}],"termid":"MONDO:0007674","xrefs":{"Monarch":{"xref_id":"0007674"}}}


id: PBO:0046650
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial cell adhesion molecule","termid":"PBO:0046650"}


id: MONDO:0006616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An allergic contact dermatitis caused by exposure to plants of the genus Toxicodendron (formerly Rhus). These include poison ivy, poison oak, and poison sumac, all plants that contain the substance urushiol, a potent skin sensitizing agent. (From Dorland, 27th ed)","definition_xrefs":["MESH:D011040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic contact dermatitis","termid":"MONDO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"toxicodendron dermatitis","secondary_identifiers":["MEDGEN:10820","SCTID:410049000","UMLS:C0032342","EFO:1000773","ICD9:692.6","DOID:3819"],"synonyms":[{"name":"Rhus dermatitis","type":"exact"},{"name":"contact dermatitis due to genus Toxicodendron","type":"exact"}],"termid":"MONDO:0006616","xrefs":{"Monarch":{"xref_id":"0006616"}}}


id: GO:0102670
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4',7-trihydroxyisoflavanone + S-adenosyl-L-methionine = H+ + 2,7-dihydroxy-4'-methoxyisoflavanone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"2,7,4'-trihydroxyisoflavanone-4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-3624","RHEA:31371"],"termid":"GO:0102670"}


id: PBO:0070322
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 11","termid":"PBO:0070322"}


id: GO:0008740
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id: GO:1902336
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id: PBO:0082781
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex","termid":"PBO:0082781"}


id: GO:0000054
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id: SO:1000014
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution of a purine, A or G, for another purine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition","termid":"SO:1000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine_transition","synonyms":[{"name":"purine transition","type":"exact"}],"termid":"SO:1000014"}


id: GO:0007191
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id: PBO:0044005
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein alpha s1","termid":"PBO:0044005"}


id: MONDO:0000558
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spastic ataxia (obsolete MONDO:0000558)","termid":"MONDO:0000558","xrefs":{"Monarch":{"xref_id":"0000558"}}}


id: GO:0006402
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id: MONDO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"residual stage of open angle glaucoma","secondary_identifiers":["DOID:1066","MEDGEN:509733","ICD9:365.15","UMLS:C0154944","SCTID:66990007"],"synonyms":[{"name":"open-angle glaucoma residual stage","type":"exact"},{"name":"residual stage of open angle glaucoma","type":"exact"}],"termid":"MONDO:0001094","xrefs":{"Monarch":{"xref_id":"0001094"}}}


id: MONDO:0020109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional megaloblastic anemia due to vitamin B12 metabolism disorder (obsolete MONDO:0020109)","secondary_identifiers":["Orphanet:98396"],"termid":"MONDO:0020109","xrefs":{"Monarch":{"xref_id":"0020109"}}}


id: PBO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_transport","termid":"PBO:0031715"}


id: FYPO:0006467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is higher than normal. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased mature ncRNA level","synonyms":[{"name":"increased mature ncRNA accumulation","type":"related"},{"name":"increased mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature ncRNA level during vegetative growth","type":"exact"},{"name":"increased mature ncRNA transcript level","type":"exact"},{"name":"increased mature non-coding RNA level","type":"exact"},{"name":"increased ncRNA level","type":"broad"}],"termid":"FYPO:0006467"}


id: _global:go_annotation_extension_relation
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"go_annotation_extension_relation","secondary_identifiers":["GOREL:0000000"],"termid":"_global:go_annotation_extension_relation"}


id: MONDO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a beta-lactam.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-lactam allergy (obsolete MONDO:0000794)","secondary_identifiers":["DOID:0060519"],"synonyms":[{"name":"allergy of beta-lactam","type":"exact"},{"name":"beta-lactam allergic disease","type":"exact"}],"termid":"MONDO:0000794","xrefs":{"Monarch":{"xref_id":"0000794"}}}


id: PBO:0053398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 328","termid":"PBO:0053398"}


id: PBO:0077260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10","termid":"PBO:0077260"}


id: PBO:0043180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1","termid":"PBO:0043180"}


id: GO:1901516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"aspyridone A metabolic process","synonyms":[{"name":"aspyridone A metabolism","type":"exact"}],"termid":"GO:1901516"}


id: _global:has_output_o_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the gene_product_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_product_of","secondary_identifiers":["GOREL:0001029"],"termid":"_global:has_output_o_product_of"}


id: PBO:0082609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity; involved in protein folding/refolding in the mitochodrial matrix; required for proteolysis of misfolded proteins; member of the HSP40 (DnaJ) family of chaperones","termid":"PBO:0082609"}


id: MONDO:0001336
data:
  {"annotated_genes":["SJAG_01072","SJAG_04785","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86867,86865,86866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","definition":"An instance of hyperlipidemia (disease) that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"hyperlipidemia","termid":"MONDO:0021187"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"familial hyperlipidemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1168","NANDO:2200603","NCIT:C34709","SCTID:55822004","ICD10CM:E78.5","MESH:D006949","UMLS:C0700623","MEDGEN:675194"],"synonyms":[{"name":"familial hyperlipemia","type":"related"},{"name":"familial hyperlipoproteinemia","type":"related"},{"name":"hereditary hyperlipidemia (disease)","type":"exact"},{"name":"hyperlipemia","type":"broad"},{"name":"hyperlipidaemia","type":"broad"}],"termid":"MONDO:0001336","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0001336"}}}


id: MONDO:0001200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High blood pressure caused by an underlying medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary hypertension","secondary_identifiers":["ICD9:405.99","UMLS:C0155616","DOID:11130","EFO:1002034","ICD9:405","icd11.foundation:1331849426","MEDGEN:57609","SCTID:31992008","ICD9:405.9"],"termid":"MONDO:0001200","xrefs":{"Monarch":{"xref_id":"0001200"}}}


id: PBO:0049208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2B","termid":"PBO:0049208"}


id: GO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in lateral roots.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root branching","termid":"GO:0080181"}


id: PBO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.10","termid":"PBO:0001840"}


id: MONDO:0012220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Griscelli syndrome characterized by isolated silvery gray sheen of the hair and hypopigmentation of the skin that has material basis in mutation in the MLPH or MYO5A genes.","definition_xrefs":["DOID:0060834","PMID:12148598","PMID:12897212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Griscelli syndrome","termid":"MONDO:0018306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Griscelli syndrome type 3","secondary_identifiers":["ICD10CM:E70.3","OMIM:609227","GARD:9715","MEDGEN:373124","icd11.foundation:1959052636","Orphanet:79478","UMLS:C1836573","MESH:C537303"],"synonyms":[{"name":"GS3","type":"exact"},{"name":"Griscelli disease type 3","type":"related"},{"name":"Griscelli syndrome type 3","type":"exact"},{"name":"Griscelli syndrome, type 3","type":"related"},{"name":"Griscelli-PruniC)ras syndrome type 3","type":"exact"},{"name":"Griscelli-Pruniéras syndrome type 3","type":"exact"},{"name":"Griscelli-Pruni��ras syndrome type 3","type":"exact"},{"name":"hypomelanosis with no immunologic or neurologic manifestations","type":"related"}],"termid":"MONDO:0012220","xrefs":{"Monarch":{"xref_id":"0012220"}}}


id: PBO:0047903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q11)","termid":"PBO:0047903"}


id: PBO:0029150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_diamide","termid":"PBO:0029150"}


id: GO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of membrane attack complex","termid":"GO:0001969"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activation of membrane attack complex","synonyms":[{"name":"down regulation of activation of membrane attack complex","type":"exact"},{"name":"down-regulation of activation of membrane attack complex","type":"exact"},{"name":"downregulation of activation of membrane attack complex","type":"exact"},{"name":"inhibition of activation of membrane attack complex","type":"narrow"},{"name":"negative regulation of MAC assembly","type":"exact"},{"name":"negative regulation of MAC formation","type":"exact"},{"name":"negative regulation of activation of MAC","type":"exact"},{"name":"negative regulation of activation of TCC","type":"narrow"},{"name":"negative regulation of activation of terminal complement complex","type":"narrow"},{"name":"negative regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"negative regulation of membrane attack complex assembly","type":"exact"},{"name":"negative regulation of membrane attack complex formation","type":"exact"}],"termid":"GO:0001971"}


id: GO:0141117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents the activation of host complement by binding a soluble complement control protein (CCP) of the host and recruiting it to the microbe surface. The normal role of CCPs is to prevent complement activation on 'self' cellular targets. When soluble CCPs are recuited to the surface of a microbe, the complement fails to activate.","definition_xrefs":["PMID:27304426","PMID:22540535","PMID:17513779","PMID:24129254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by recruitment of complement control protein","synonyms":[{"name":"suppression of complement activation by another organism by recruitment of complement control protein","type":"broad"},{"name":"suppression of complement activation by another organism by recuitement of complement control protein","type":"exact"}],"termid":"GO:0141117"}


id: MONDO:0012196
data:
  {"annotated_genes":["SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85687],"is_not":false,"summary":null,"term":"MONDO:0012196"}]},"cv_name":"mondo","definition":"Any auditory neuropathy in which the cause of the disease is a mutation in the DIAPH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"},{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant auditory neuropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18127","UMLS:C1836743","OMIM:609129","DOID:0060690","MEDGEN:322984","MESH:C563790"],"synonyms":[{"name":"AUNA1","type":"exact"},{"name":"DIAPH3 auditory neuropathy","type":"exact"},{"name":"NSDAN","type":"exact"},{"name":"auditory neuropathy caused by mutation in DIAPH3","type":"exact"},{"name":"auditory neuropathy, autosomal dominant, 1","type":"related"},{"name":"auditory neuropathy, autosomal dominant, type 1","type":"exact"},{"name":"auditory neuropathy, nonsyndromic dominant","type":"related"},{"name":"autosomal dominant auditory neuropathy type 1","type":"exact"},{"name":"nonsyndromic dominant auditory neuropathy","type":"exact"}],"termid":"MONDO:0012196","terms_by_termid":{"MONDO:0012196":null},"xrefs":{"Monarch":{"xref_id":"0012196"}}}


id: GO:0051469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"vacuole fusion","termid":"GO:0097576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle fusion with vacuole","secondary_identifiers":["GO:0042146"],"synonyms":[{"name":"heterotypic vacuole fusion (non-autophagic)","type":"related"},{"name":"heterotypic vacuole fusion, non-autophagic","type":"related"}],"termid":"GO:0051469"}


id: GO:0043221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein from the structural maintenance of chromosomes (SMC) family, a group of chromosomal ATPases with a role in mitotic chromosome organization.","definition_xrefs":["PMID:9640531","GOC:jl","GOC:vw","InterPro:IPR024704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"SMC family protein binding","synonyms":[{"name":"structural maintenance of chromosomes family protein binding","type":"exact"}],"termid":"GO:0043221"}


id: MONDO:0011486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy type 1B is a rare, genetic neuromuscular disorder characterized by proximal and symmetrical muscle weakness (particularly of neck, sternomastoid, facial and diaphragm muscles), spinal rigidity, joint contractures (Achilles tendon, elbows, hands), generalized muscle hypertrophy and early respiratory failure (usually in the first decade of life). Patients typically present delayed motor milestones and grossly elevated serum creatine kinase levels, and with disease progression, forced expiratory abdominal squeeze and nocturnal hypoventilation.","definition_xrefs":["Orphanet:98893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy 1B","secondary_identifiers":["GARD:12586","MESH:C565748","SCTID:764944006","UMLS:C1858118","MEDGEN:346746","DOID:0110634","OMIM:604801"],"synonyms":[{"name":"CMD1B","type":"exact"},{"name":"MDC1B","type":"exact"},{"name":"congenital muscular dystrophy type 1B","type":"exact"},{"name":"muscular dystrophy, congenital, 1B","type":"related"}],"termid":"MONDO:0011486","xrefs":{"Monarch":{"xref_id":"0011486"}}}


id: GO:0007014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of actin by addition of ubiquitin groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"},{"relation_name":"is_a","term_name":"actin modification","termid":"GO:0030047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0070647","GO:0008150"],"is_obsolete":false,"name":"actin ubiquitination","synonyms":[{"name":"indirect flight muscle actin ubiquitination","type":"narrow"}],"termid":"GO:0007014"}


id: MONDO:0007955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital pouch in the distal ileum. It may cause painless rectal bleeding and bowel obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulum","secondary_identifiers":["EFO:1001036","MedDRA:10027055","OMIM:155140","SCTID:37373007","icd11.foundation:216192536","ICD9:751.0","MEDGEN:9917","NCIT:C12264","MESH:D008467","UMLS:C0025037","DOID:9487"],"synonyms":[{"name":"Meckel diverticulum","type":"exact"},{"name":"Meckel's diverticulum","type":"exact"},{"name":"persistent vitelline duct","type":"exact"}],"termid":"MONDO:0007955","xrefs":{"Monarch":{"xref_id":"0007955"}}}


id: GO:0033123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide catabolic process","termid":"GO:0030813"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleotide catabolic process","synonyms":[{"name":"positive regulation of purine nucleotide breakdown","type":"exact"},{"name":"positive regulation of purine nucleotide catabolism","type":"exact"},{"name":"positive regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033123"}


id: PBO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4 (predicted)","termid":"PBO:0001644"}


id: PBO:0004765
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi Homolog","termid":"PBO:0004765"}


id: PBO:0084775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; major constituent of the outer membrane, extending into the intermembrane space; interacts with porin (Por1p) and with Om14p; imported via the presequence pathway involving the TOM and TIM23 complexes, then assembled in the outer membrane by Mim1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0084775"}


id: MONDO:0015658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral diseases of vascular origin with epilepsy (obsolete MONDO:0015658)","secondary_identifiers":["Orphanet:166487"],"termid":"MONDO:0015658","xrefs":{"Monarch":{"xref_id":"0015658"}}}


id: GO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell. A retinal cone cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["PMID:3937883","GOC:mtg_sensu","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal cone cell differentiation","termid":"GO:0042670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate commitment","termid":"GO:0046551"}


id: PBO:0064175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XB, pseudogene","termid":"PBO:0064175"}


id: GO:1901545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a raffinose stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to raffinose","termid":"GO:1901545"}


id: PBO:0036057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-C-shaped_cytoplasmic_microtubules","termid":"PBO:0036057"}


id: GO:0035965
data:
  {"annotated_genes":["SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71460],"is_not":false,"summary":null,"term":"GO:0035965"}]},"cv_name":"biological_process","definition":"Remodeling the acyl chains of premature (de novo synthesized) cardiolipin (1,3-bis(3-phosphatidyl)glycerol), through sequential deacylation and re-acylation reactions, to generate mature cardiolipin containing high-levels of unsaturated fatty acids.","definition_xrefs":["PMID:19244244","GOC:bf","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cardiolipin acyl-chain remodeling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1482798"],"synonyms":[{"name":"cardiolipin acyl-chain remodelling","type":"exact"},{"name":"cardiolipin maturation","type":"broad"},{"name":"diphosphatidylglycerol remodeling","type":"related"}],"termid":"GO:0035965","terms_by_termid":{"GO:0035965":null}}


id: MONDO:0013519
data:
  {"annotated_genes":["SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85833],"is_not":false,"summary":null,"term":"MONDO:0013519"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal recessive mutation of NOLA2 on chromosome 5q35.3.","definition_xrefs":["DOID:0070017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00083":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176926","MEDGEN:462791","OMIM:613987","UMLS:C3151441","GARD:15739"],"synonyms":[{"name":"DKCB2","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 2","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 2","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0013519","terms_by_termid":{"MONDO:0013519":null},"xrefs":{"Monarch":{"xref_id":"0013519"}}}


id: RO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a piece of evidence a and some entity b, where b is  an information content entity, material entity or process, and \\nthe a supports either the existence of b, or the truth value of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_evidence_for","termid":"RO:0002472"}


id: PBO:0090770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF34 family protein","termid":"PBO:0090770"}


id: FYPO:0000551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pseudohyphal growth does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"pseudohyphal growth abolished","secondary_identifiers":["FYPO:0000436"],"synonyms":[{"name":"abolished filamentous growth","type":"broad"},{"name":"abolished pseudohyphal growth","type":"exact"},{"name":"absent filamentous growth","type":"broad"},{"name":"absent pseudohyphal growth","type":"exact"},{"name":"filamentous growth abolished","type":"broad"},{"name":"filamentous growth: absent","type":"broad"},{"name":"pseudohyphal growth: absent","type":"related"}],"termid":"FYPO:0000551"}


id: GO:1903018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycoprotein metabolic process.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:23544079","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycoprotein metabolic process","synonyms":[{"name":"regulation of glycoprotein metabolism","type":"exact"}],"termid":"GO:1903018"}


id: GO:2000960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellooligosaccharide metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellooligosaccharide metabolic process","synonyms":[{"name":"regulation of cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000960"}


id: GO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either active or passive, by which an organism avoids the effects of the symbiont organism's immune response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance of symbiont immune response (obsolete GO:0051842)","synonyms":[{"name":"evasion or tolerance of symbiont immune response","type":"exact"},{"name":"immune evasion","type":"broad"}],"termid":"GO:0051842"}


id: FYPO:0003280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003197"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during copper ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during vegetative growth","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003280"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["GOC:bf","Wikipedia:Enkephalin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: MONDO:0013816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palmoplantar keratoderma, mutilating, with periorificial keratotic plaques (obsolete MONDO:0013816)","termid":"MONDO:0013816","xrefs":{"Monarch":{"xref_id":"0013816"}}}


id: PBO:0109141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic, EGF-CFC family member 1","termid":"PBO:0109141"}


id: PBO:0045531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene","termid":"PBO:0045531"}


id: MONDO:0958186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematuria, benign familial","termid":"MONDO:0957317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematuria, benign familial, 2","secondary_identifiers":["MEDGEN:1841057","OMIM:620320","UMLS:C5830421"],"termid":"MONDO:0958186","xrefs":{"Monarch":{"xref_id":"0958186"}}}


id: PBO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Cox16 (predicted)","termid":"PBO:0001931"}


id: PR:Q9UTA1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- loz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C25B8.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.19c","synonyms":[{"name":"Spom972h-loz1","type":"exact"}],"termid":"PR:Q9UTA1"}


id: PBO:0113516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via ubiquitin-26S proteasome system; essential for cellular stress response; encoded as polyubiquitin precursor comprised of 5 head-to-tail repeats; number of repeats is evolutionarily unstable within and between yeast species; protein abundance increases in response to DNA replication stress; implicated as modulator of replicative lifespan and meiotic recombination","termid":"PBO:0113516"}


id: PBO:0003863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc4","termid":"PBO:0003863"}


id: MONDO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphatic system disease (obsolete MONDO:0004246)","termid":"MONDO:0004246","xrefs":{"Monarch":{"xref_id":"0004246"}}}


id: PBO:0053436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 381","termid":"PBO:0053436"}


id: PBO:0040453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP11A upstream neighbor lncRNA","termid":"PBO:0040453"}


id: PBO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 8 (pseudogene)","termid":"PBO:0060160"}


id: FYPO:0008268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphate (Pi) measured in the cell is lower than normal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphate (Pi) level","termid":"FYPO:0008268"}


id: FYPO:0007116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein in the actomyosin contractile ring is lower than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:23615450","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"decreased protein level in actomyosin contractile ring during mitotic interphase","synonyms":[{"name":"decreased protein level in actomyosin contractile ring during interphase during vegetative growth","type":"exact"},{"name":"decreased protein level in actomyosin contractile ring during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level in contractile ring during mitotic interphase","type":"exact"},{"name":"reduced protein level in actomyosin contractile ring during mitotic interphase","type":"exact"}],"termid":"FYPO:0007116"}


id: PBO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin and PNKP like factor","termid":"PBO:0039703"}


id: MONDO:1010456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in woolly monkeys.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, woolly monkeys","secondary_identifiers":["OMIA:000515-9518"],"termid":"MONDO:1010456","xrefs":{"Monarch":{"xref_id":"1010456"}}}


id: SO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription factor binding site of variable direct repeats of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["PMID:11327309","PMID:19917671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic_acid_responsive_element","synonyms":[{"name":"RARE","type":"exact"},{"name":"retinoic acid responsive element","type":"exact"}],"termid":"SO:0001653"}


id: GO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-based cuticle development (obsolete GO:0007592)","synonyms":[{"name":"protein-based cuticle anabolism","type":"exact"},{"name":"protein-based cuticle biosynthetic process","type":"exact"},{"name":"protein-based cuticle development","type":"exact"},{"name":"protein-based cuticle formation","type":"exact"},{"name":"protein-based cuticle synthesis","type":"exact"}],"termid":"GO:0007592"}


id: PBO:0068787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 24, pseudogene","termid":"PBO:0068787"}


id: PBO:0042304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD19 molecule","termid":"PBO:0042304"}


id: MONDO:0958011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 117","secondary_identifiers":["UMLS:C5882739","OMIM:620668","MEDGEN:1848763"],"termid":"MONDO:0958011","xrefs":{"Monarch":{"xref_id":"0958011"}}}


id: PBO:0003503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase (predicted)","termid":"PBO:0003503"}


id: MONDO:1012332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemophagocytic syndrome, non-human animal","termid":"MONDO:1011697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophagocytic syndrome, dog","secondary_identifiers":["OMIA:001229-9615"],"termid":"MONDO:1012332","xrefs":{"Monarch":{"xref_id":"1012332"}}}


id: FYPO:0001749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to tacrolimus","termid":"FYPO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tacrolimus during salt stress","synonyms":[{"name":"hypersensitive to tacrolimus during salt stress","type":"exact"},{"name":"sensitive to FK506 during salt stress","type":"exact"},{"name":"sensitive to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001749"}


id: PBO:0054396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1792","termid":"PBO:0054396"}


id: GO:0021655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 2 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 2 development","termid":"GO:0021568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}


id: GO:0014809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by calcium ion signaling","termid":"GO:0014722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"}


id: FYPO:0002914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal in intergenic regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased intergenic transcription","synonyms":[{"name":"increased intergenic transcription during mitotic cell cycle","type":"related"},{"name":"increased transcription at intergenic regions during vegetative growth","type":"exact"},{"name":"increased transcription from intergenic regions","type":"exact"},{"name":"increased transcription from intergenic regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002914"}


id: PBO:0079211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 3","termid":"PBO:0079211"}


id: PBO:0059574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2A","termid":"PBO:0059574"}


id: PBO:0063760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1 pseudogene 1","termid":"PBO:0063760"}


id: PBO:0075605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3","termid":"PBO:0075605"}


id: PBO:0027024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0027024"}


id: PBO:0059354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16 pseudogene 2","termid":"PBO:0059354"}


id: PBO:0044479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 2","termid":"PBO:0044479"}


id: PBO:0061027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA involved in NHEJ oncogenic ligation efficiency","termid":"PBO:0061027"}


id: PR:O60097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor spt8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.17c","synonyms":[{"name":"Spom972h-spt8","type":"exact"}],"termid":"PR:O60097"}


id: PBO:0072587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 9, U3 small nucleolar RNA binding protein","termid":"PBO:0072587"}


id: GO:0071005
data:
  {"annotated_genes":["SJAG_03430"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106000],"is_not":false,"summary":null,"term":"GO:0071005"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.","definition_xrefs":["GOC:krc","GOC:ab","PMID:19239890","PMID:18322460","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"precatalytic spliceosome","termid":"GO:0071011"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03430":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U2-type precatalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG precatalytic spliceosome","type":"narrow"},{"name":"major precatalytic spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex B","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex B1","type":"narrow"},{"name":"yeast U12-type spliceosomal complex A2-1","type":"related"}],"termid":"GO:0071005","terms_by_termid":{"GO:0071005":null}}


id: PBO:0074951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-2","termid":"PBO:0074951"}


id: FYPO:0002486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic strand displacement is decreased. Meiotic strand displacement is the part of meiotic recombination in which the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA is rejected.","definition_xrefs":["GO:0000714","PMID:22723423","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"decreased meiotic strand displacement","synonyms":[{"name":"decreased D-loop unwinding","type":"related"},{"name":"decreased meiotic D-loop dissociation","type":"exact"},{"name":"decreased meiotic D-loop processing","type":"related"},{"name":"reduced meiotic strand displacement","type":"exact"}],"termid":"FYPO:0002486"}


id: PBO:0072458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: MONDO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the liver with species of mycobacterium, most often mycobacterium tuberculosis. It is characterized by localized small tuberculous miliary lesions or tumor-like mass (tuberculoma), and abnormalities in liver function tests.","definition_xrefs":["MESH:D014386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"},{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"},{"relation_name":"is_a","term_name":"endocrine tuberculosis","termid":"MONDO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic tuberculosis","secondary_identifiers":["EFO:0007302","ICD9:017.90","DOID:407","MEDGEN:11944","SCTID:186273003","UMLS:C0041313"],"synonyms":[{"name":"tuberculosis of liver","type":"exact"}],"termid":"MONDO:0005787","xrefs":{"Monarch":{"xref_id":"0005787"}}}


id: PBO:0044372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cylicin 2","termid":"PBO:0044372"}


id: GO:0071590
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70222],"is_not":false,"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["GOC:mah","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside biosynthetic process","termid":"GO:0071589"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinamide riboside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"N-ribosylnicotinamide biosynthetic process","type":"exact"},{"name":"nicotinamide riboside anabolism","type":"exact"},{"name":"nicotinamide riboside biosynthesis","type":"exact"},{"name":"nicotinamide riboside formation","type":"exact"},{"name":"nicotinamide riboside synthesis","type":"exact"}],"termid":"GO:0071590","terms_by_termid":{"GO:0071590":null}}


id: PBO:0077314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 1","termid":"PBO:0077314"}


id: GO:0022877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + fructose(out) = protein histidine + fructose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0016740","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity","synonyms":[{"name":"fructose PTS transporter activity","type":"exact"}],"termid":"GO:0022877"}


id: FYPO:0008127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype where a ribosome is mislocalized to the nucleoplasm in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"ribosome mislocalized to nucleoplasm","termid":"FYPO:0008127"}


id: PBO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_extension","termid":"PBO:0006165"}


id: PBO:0055447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2878","termid":"PBO:0055447"}


id: PBO:0003406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein Ecl2","termid":"PBO:0003406"}


id: MONDO:0020156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic ankyloblepharon (obsolete MONDO:0020156)","secondary_identifiers":["Orphanet:98565"],"termid":"MONDO:0020156","xrefs":{"Monarch":{"xref_id":"0020156"}}}


id: MONDO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast ductal carcinoma (obsolete MONDO:0002484)","termid":"MONDO:0002484","xrefs":{"Monarch":{"xref_id":"0002484"}}}


id: PBO:0042127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 201","termid":"PBO:0042127"}


id: GO:1990391
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527","SJAG_02237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[116713,80454,100302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A protein complex involved in DNA repair processes including direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.","definition_xrefs":["GOC:bhm","PMID:24192350","PMID:17217467","PMID:20551348","PMID:22749910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA repair complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage repair complex","type":"exact"},{"name":"WHY1 complex","type":"narrow"}],"termid":"GO:1990391","terms_by_termid":{"GO:0032807":null}}


id: GO:0022006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the narrow stripe of cells that lies between the prospective dorsal and ventral thalami. This boundary contains signals that pattern the prethalamic and thalamic territories of the future mid-diencephalon.","definition_xrefs":["PMID:16452095","GOC:dph","GO_REF:0000021","GOC:cls","PMID:11425897","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zona limitans intrathalamica formation","synonyms":[{"name":"zli biosynthesis","type":"exact"},{"name":"zli formation","type":"exact"}],"termid":"GO:0022006"}


id: MONDO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"papillary extrahepatic bile duct adenocarcinoma","secondary_identifiers":["MEDGEN:167831","UMLS:C0861858","DOID:6931"],"termid":"MONDO:0004039","xrefs":{"Monarch":{"xref_id":"0004039"}}}


id: PBO:0082126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acireductone dioxygenease involved in methionine salvage pathway; transcribed as polycistronic mRNA with YMR010W and regulated post-transcriptionally by RNase III (Rnt1p) cleavage; ADI1 mRNA is induced in heat shock conditions; human ortholog ADI1 can complement yeast adi1 mutant","termid":"PBO:0082126"}


id: PBO:0005794
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis","termid":"PBO:0005794"}


id: PBO:0079348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tweety family member 1","termid":"PBO:0079348"}


id: PBO:0034109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realizes","termid":"PBO:0034109"}


id: PBO:0028442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028442"}


id: PBO:0033809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_following_meiotic_cell_cycle","termid":"PBO:0033809"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: PR:Q9P780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear protein localization protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03153","PANTHER:PTHR12710:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein localization protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.10c","secondary_identifiers":["UniProtKB:Q9P780"],"synonyms":[{"name":"Spom972h-NPLOC4","type":"exact"}],"termid":"PR:Q9P780"}


id: MONDO:0036212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraparesis-cataracts-speech delay syndrome","secondary_identifiers":["GARD:18033","OMIM:619338","Orphanet:615938"],"synonyms":[{"name":"Fatty acyl-CoA reductase 1 superactivity","type":"exact"}],"termid":"MONDO:0036212","xrefs":{"Monarch":{"xref_id":"0036212"}}}


id: GO:0001526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Transfer of sulfate to a proteoglycan (a glycoprotein whose carbohydrate units are glycosaminoglycans) using 3'-phosphoadenyl sulfate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete proteoglycan sulfate transfer (obsolete GO:0001526)","synonyms":[{"name":"proteoglycan sulfate transfer","type":"exact"},{"name":"proteoglycan sulphate transfer","type":"exact"}],"termid":"GO:0001526"}


id: GO:0061251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"}


id: GO:0060424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the foregut into the area in which the lung will develop.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"foregut regionalization","termid":"GO:0060423"},{"relation_name":"part_of","term_name":"primary lung bud formation","termid":"GO:0060431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung field specification","synonyms":[{"name":"lung specification","type":"exact"}],"termid":"GO:0060424"}


id: PBO:0056499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 3","termid":"PBO:0056499"}


id: PBO:0066143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBAK downstream neighbor","termid":"PBO:0066143"}


id: MONDO:0011588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood coagulation disease characterized by autosomal dominant inheritance of mildly increased bleeding, platelet aggregation defect, and impaired conversion of arachidonic acid to thromboxane A2 in platelets due to deficiency in PTGS1 activity.","definition_xrefs":["PMID:8562397","DOID:0111058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 12","secondary_identifiers":["MEDGEN:414043","MESH:C567786","OMIM:605735","UMLS:C2751535"],"synonyms":[{"name":"BDPLT12","type":"exact"},{"name":"PGHS1 deficiency","type":"exact"},{"name":"bleeding disorder, platelet-type, 12","type":"related"},{"name":"platelet COX1 deficiency","type":"exact"},{"name":"platelet cyclooxygenase 1 deficiency","type":"exact"},{"name":"platelet prostaglandin-endoperoxide synthase 1 deficiency","type":"exact"},{"name":"prostaglandin-endoperoxide synthase 1 deficiency, platelet","type":"related"}],"termid":"MONDO:0011588","xrefs":{"Monarch":{"xref_id":"0011588"}}}


id: GO:0033323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate CDP-choline.","definition_xrefs":["MetaCyc:PWY-3561","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via CDP-choline","synonyms":[{"name":"choline anabolism via CDP-choline","type":"exact"},{"name":"choline biosynthesis via CDP-choline","type":"exact"},{"name":"choline formation via CDP-choline","type":"exact"},{"name":"choline synthesis via CDP-choline","type":"exact"}],"termid":"GO:0033323"}


id: PBO:0089308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase Pdx3","termid":"PBO:0089308"}


id: GO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into striated muscle fibers.","definition_xrefs":["CL:0000056","GOC:go_curators","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast differentiation","synonyms":[{"name":"myoblast cell differentiation","type":"exact"}],"termid":"GO:0045445"}


id: SO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non coding RNA sequence, present in the cytoplasm.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"scRNA_primary_transcript","termid":"SO:0000012"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:scRNA","type":"exact"},{"name":"small cytoplasmic RNA","type":"exact"}],"termid":"SO:0000013"}


id: MONDO:0017047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"axonal neuropathy","termid":"MONDO:0004183"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"infantile axonal neuropathy","secondary_identifiers":["Orphanet:2679","GARD:2996"],"termid":"MONDO:0017047","xrefs":{"Monarch":{"xref_id":"0017047"}}}


id: MONDO:0019425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked intellectual disability-hypotonia-facial dysmorphism-aggressive behavior syndrome (obsolete MONDO:0019425)","termid":"MONDO:0019425","xrefs":{"Monarch":{"xref_id":"0019425"}}}


id: MONDO:0031329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome","secondary_identifiers":["DOID:0081072","OMIMPS:213980"],"termid":"MONDO:0031329","xrefs":{"Monarch":{"xref_id":"0031329"}}}


id: PBO:0039431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin 2","termid":"PBO:0039431"}


id: PBO:0031683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_peroxisome_degradation","termid":"PBO:0031683"}


id: GO:0018149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between or within protein chains.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking","termid":"GO:0018149"}


id: GO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ethanol","secondary_identifiers":["GO:0017036"],"termid":"GO:0045471"}


id: FYPO:0006295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished macroautophagy during nitrogen starvation","synonyms":[{"name":"abolished macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished macroautophagy during nitrogen depletion","type":"exact"},{"name":"abolished macroautophagy during nitrogen deprivation","type":"exact"},{"name":"macroautophagy abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006295"}


id: PBO:0057535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 651","termid":"PBO:0057535"}


id: GO:0010583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["PMID:18334669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclopentenone","termid":"GO:0010583"}


id: MONDO:0011066
data:
  {"annotated_genes":["SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86581],"is_not":false,"summary":null,"term":"MONDO:0011066"}]},"cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4B1 (CMT4B1) is a subtype of Charcot-Marie-Tooth disease type 4 characterized by an early childhood-onset of severe, demyelinating sensorimotor neuropathy, various degrees of complex myelin outfoldings seen on peripheral nerve biopsy, very slow, and often undetectable, nerve conduction velocities, and the typical CMT phenotype (i.e. distal muscle weakness and atrophy, sensory loss, and frequent pes cavus). Other reported features include facial weakness, vocal cord paresis, respiratory difficulties, and skeletal deformities (e.g. chest deformities, claw hands, pes equinovarus).","definition_xrefs":["Orphanet:99955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4B1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1253","icd11.foundation:776238355","OMIM:601382","UMLS:C1832399","MESH:C535420","MEDGEN:321947","DOID:0110191","SCTID:715803003"],"synonyms":[{"name":"CMT 4B","type":"related"},{"name":"CMT 4B1","type":"related"},{"name":"CMT4B1","type":"exact"},{"name":"Charcot Marie Tooth disease type 4B1","type":"related"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in MTMR2","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4B1","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal recessive, with focally folded myelin sheaths, autosomal recessive, type 4B1","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4B","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4B1","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 4B1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 4B1","type":"related"},{"name":"MTMR2 Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"autosomal recessive Charcot-Marie-Tooth disease with focally folded myelin sheaths type 4B1","type":"exact"}],"termid":"MONDO:0011066","terms_by_termid":{"MONDO:0011066":null},"xrefs":{"Monarch":{"xref_id":"0011066"}}}


id: PBO:0116661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 4A pseudogene 4","termid":"PBO:0116661"}


id: PBO:0057532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 648","termid":"PBO:0057532"}


id: GO:1990350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating glucose transport into, out of or within a cell, or between cells.","definition_xrefs":["PMID:15449578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glucose transporter complex","termid":"GO:1990350"}


id: GO:0019957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-C chemokine; C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C-C chemokine binding","termid":"GO:0019957"}


id: GO:1990570
data:
  {"annotated_genes":["SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72185],"is_not":false,"summary":null,"term":"GO:1990570"}]},"cv_name":"biological_process","definition":"The process in which GDP-mannose is transported across a membrane.","definition_xrefs":["PMID:9395539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transport","termid":"GO:0090480"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"GDP-mannose transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015784"],"synonyms":[{"name":"GDP-mannose transport","type":"related"}],"termid":"GO:1990570","terms_by_termid":{"GO:1990570":null}}


id: GO:0097284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatocyte, the main structural component of the liver.","definition_xrefs":["PMID:15856020","GOC:mtg_apoptosis","CL:0000182","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte apoptotic process","synonyms":[{"name":"hepatocyte apoptosis","type":"narrow"}],"termid":"GO:0097284"}


id: GO:0047438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-L-pentonate = glycolaldehyde + pyruvate.","definition_xrefs":["EC:4.1.2.18","MetaCyc:4.1.2.18-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-L-pentonate aldolase activity","secondary_identifiers":["RHEA:18545"],"synonyms":[{"name":"2-dehydro-3-deoxy-L-pentonate glycolaldehyde-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-L-pentonate glycolaldehyde-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-D-xylonate aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-L-arabonate aldolase activity","type":"narrow"},{"name":"2-keto-3-deoxy-L-pentonate aldolase activity","type":"related"},{"name":"3-deoxy-D-pentulosonic acid aldolase","type":"broad"}],"termid":"GO:0047438"}


id: GO:0014832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract.","definition_xrefs":["GOC:mr","PMID:18276178","GOC:mtg_muscle","PMID:538956","PMID:11768524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"}


id: GO:0010183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the growth of pollen tube is directed towards the female gametophyte.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube guidance","termid":"GO:0010183"}


id: GO:0005782
data:
  {"annotated_genes":["SJAG_02630","SJAG_00706","SJAG_00702","SJAG_00947","SJAG_02496","SJAG_04823","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71120,105677,112217,112234,115135,116150,118683],"is_not":false,"summary":null,"term":"GO:0005782"}]},"cv_name":"cellular_component","definition":"The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody lumen","termid":"GO:0031907"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00947":null,"SJAG_02496":null,"SJAG_02630":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005777","GO:0005575"],"is_obsolete":false,"name":"peroxisomal matrix","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031909"],"synonyms":[{"name":"peroxisomal lumen","type":"exact"}],"termid":"GO:0005782","terms_by_termid":{"GO:0005782":null}}


id: GO:1903823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Single strand break repair that takes place in a telomere.","definition_xrefs":["GO_REF:0000062","GOC:TermGenie","PMID:24374808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"telomere single strand break repair","synonyms":[{"name":"single strand break repair in telomere","type":"exact"},{"name":"telomere SSBR","type":"related"},{"name":"telomere single-strand break repair","type":"exact"},{"name":"telomeric single strand break repair","type":"exact"}],"termid":"GO:1903823"}


id: GO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting immunoglobulin, via transcytosis, from one side of an epithelial cell to the other.","definition_xrefs":["GOC:add","ISBN:081533642X","PMID:16048543","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"}


id: GO:0017114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a protease by a wide-spectrum protease inhibitor. A wide-spectrum protease inhibitor is a protein having a peptide stretch which contains specific cleavage sites for different proteinases enabling inhibition of all four classes of proteinases by formation of a covalent bond between the inhibitor and the protease.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete wide-spectrum protease inhibitor activity (obsolete GO:0017114)","synonyms":[{"name":"wide-spectrum protease inhibitor activity","type":"exact"},{"name":"wide-spectrum proteinase inhibitor","type":"exact"}],"termid":"GO:0017114"}


id: PBO:0044272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 12","termid":"PBO:0044272"}


id: MONDO:0017754
data:
  {"annotated_genes":["SJAG_02876","SJAG_03011","SJAG_01372","SJAG_05283","SJAG_05213","SJAG_04109","SJAG_01841","SJAG_03961","SJAG_02896","SJAG_04944","SJAG_05194","SJAG_03363","SJAG_00938","SJAG_01344","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[86894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[87149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87334,87333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85669,85667,85668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[86079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[85778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[86230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[85825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[87272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"},{"annotations":[85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[86098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[86743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"},{"annotations":[87079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020721"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of porphyrin-containing compound metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"porphyrin metabolism disease","termid":"MONDO:0037821"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05194":null,"SJAG_05213":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of porphyrin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21346","SCTID:403832004","ICD10CM:E80.4","Orphanet:309813"],"synonyms":[{"name":"disorder of porphyrin and haem metabolism","type":"broad"},{"name":"inborn disorder of porphyrin and haem metabolism","type":"exact"},{"name":"inborn error of porphyrin-containing compound metabolic process","type":"exact"},{"name":"inborn porphyrin-containing compound metabolic process disorder","type":"exact"},{"name":"inherited disorder of porphyrin metabolism","type":"exact"},{"name":"rare inborn error of porphyrin-containing compound metabolic process","type":"exact"}],"termid":"MONDO:0017754","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0009902":null,"MONDO:0010420":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013000":null,"MONDO:0020721":null,"MONDO:0030048":null,"MONDO:0030810":null,"MONDO:0031040":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0017754"}}}


id: PBO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDAR associated via death domain","termid":"PBO:0045783"}


id: PBO:0073771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 4","termid":"PBO:0073771"}


id: MONDO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limbic encephalitis with neurexin-3 antibodies (obsolete MONDO:0044683)","secondary_identifiers":["Orphanet:498700"],"termid":"MONDO:0044683","xrefs":{"Monarch":{"xref_id":"0044683"}}}


id: PATO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000102 macronutrient sensitivity (obsolete PATO:0000102)","termid":"PATO:0000102"}


id: PBO:0083263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 4% of ORF overlaps the verified gene RGP1; deletion causes a vacuolar protein sorting defect","termid":"PBO:0083263"}


id: GO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any B cell selection process that occurs in the periphery.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell selection","synonyms":[{"name":"peripheral B lymphocyte selection","type":"exact"},{"name":"peripheral B-cell selection","type":"exact"},{"name":"peripheral B-lymphocyte selection","type":"exact"}],"termid":"GO:0002343"}


id: GO:0008163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DDT resistance (obsolete GO:0008163)","synonyms":[{"name":"DDT resistance","type":"exact"}],"termid":"GO:0008163"}


id: PR:O94660
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nitrilase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase nit2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.02","secondary_identifiers":["UniProtKB:O94660"],"synonyms":[{"name":"Spom972h-NIT1","type":"exact"}],"termid":"PR:O94660"}


id: PATO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it into the surface or boundary of another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding into","termid":"PATO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herniated into","termid":"PATO:0002163"}


id: PBO:0065111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCE antisense RNA 1","termid":"PBO:0065111"}


id: PBO:0077089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 4","termid":"PBO:0077089"}


id: GO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Tyr-Xaa > Trp-Xaa > Phe-Xaa > Leu-Xaa.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chymotrypsin activity (obsolete GO:0004263)","synonyms":[{"name":"alpha-chymar","type":"related"},{"name":"alpha-chymar ophth","type":"related"},{"name":"alpha-chymotrypsin A","type":"related"},{"name":"alpha-chymotrypsin activity","type":"narrow"},{"name":"avazyme","type":"related"},{"name":"chymar","type":"related"},{"name":"chymotest","type":"related"},{"name":"chymotrypsin A activity","type":"narrow"},{"name":"chymotrypsin B activity","type":"narrow"},{"name":"chymotrypsin activity","type":"exact"},{"name":"chymotrypsins A and B","type":"related"},{"name":"enzeon","type":"related"},{"name":"quimar","type":"related"},{"name":"quimotrase activity","type":"related"}],"termid":"GO:0004263"}


id: MONDO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer of the upper, convex surface of the bladder.","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder dome cancer","secondary_identifiers":["ICD9:188.1","DOID:11820","UMLS:C0496827","MEDGEN:141677","SCTID:188240003"],"synonyms":[{"name":"cancer of fundus of urinary bladder","type":"exact"},{"name":"fundus of urinary bladder cancer","type":"exact"},{"name":"malignant fundus of urinary bladder neoplasm","type":"exact"},{"name":"malignant neoplasm of apex of urinary bladder","type":"exact"},{"name":"malignant neoplasm of dome of urinary bladder","type":"exact"},{"name":"malignant neoplasm of fundus of urinary bladder","type":"exact"},{"name":"malignant tumor of vault of bladder","type":"exact"},{"name":"malignant tumour of vault of bladder","type":"exact"},{"name":"superior surface of bladder","type":"exact"}],"termid":"MONDO:0001380","xrefs":{"Monarch":{"xref_id":"0001380"}}}


id: PBO:0083218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene COQ2","termid":"PBO:0083218"}


id: PBO:0075438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N3","termid":"PBO:0075438"}


id: PBO:0057775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2278","termid":"PBO:0057775"}


id: MONDO:0019801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute adrenal insufficiency (AAI) is a rare but severe condition caused by a sudden defective production of adrenal steroids (cortisol and aldosterone). It represents an emergency, thus the rapid recognition and prompt therapy are critical for survival even before the diagnosis is made.","definition_xrefs":["Orphanet:95409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary adrenal insufficiency","termid":"MONDO:0015128"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute adrenal insufficiency","secondary_identifiers":["GARD:19257","icd11.foundation:114442391","ICD9:255.41","SCTID:24867002","UMLS:C0151467","MEDGEN:56227","NCIT:C112840"],"synonyms":[{"name":"Addisonian crisis","type":"exact"},{"name":"acute adrenal failure","type":"exact"},{"name":"acute adrenocortical insufficiency","type":"exact"},{"name":"adrenal crisis","type":"exact"},{"name":"adrenocortical crisis","type":"exact"}],"termid":"MONDO:0019801","xrefs":{"Monarch":{"xref_id":"0019801"}}}


id: GO:0015203
data:
  {"annotated_genes":["SJAG_02344","SJAG_02125","SJAG_02059","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015489"},{"annotations":[71025,117743,111323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015606"},{"annotations":[80088,111324,117744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000297"}]},"cv_name":"molecular_function","definition":"Enables the transfer of polyamines, organic compounds containing two or more amino groups, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"polyamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"related"}],"termid":"GO:0015203","terms_by_termid":{"GO:0000297":null,"GO:0015489":null,"GO:0015606":null}}


id: PBO:0044508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 4","termid":"PBO:0044508"}


id: PBO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 1","termid":"PBO:0044218"}


id: PBO:0072655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8B","termid":"PBO:0072655"}


id: PBO:0069313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 571, pseudogene","termid":"PBO:0069313"}


id: MONDO:0100251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","secondary_identifiers":["GARD:10879","Orphanet:306661","UMLS:C1876187","NCIT:C131851","DOID:0111063","MEDGEN:360297"],"synonyms":[{"name":"HFTC","type":"exact"},{"name":"HHS","type":"broad"},{"name":"PHPTC","type":"exact"},{"name":"cortical hyperostosis with hyperphosphatemia","type":"exact"},{"name":"familial Teutschlaender disease","type":"exact"},{"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","type":"exact"},{"name":"hypercalcemic tumoral calcinosis","type":"exact"},{"name":"hyperostosis with hyperphosphatemia","type":"exact"},{"name":"hyperphosphatemia hyperostosis","type":"exact"},{"name":"hyperphosphatemia hyperostosis syndrome","type":"exact"},{"name":"hyperphosphatemia tumoral calcinosis","type":"exact"},{"name":"hyperphosphatemic familial tumoral calcinosis","type":"exact"},{"name":"lipocalcinogranulomatosis","type":"exact"},{"name":"morbus Teutschlaender","type":"exact"},{"name":"primary hyperphosphatemic tumoral calcinosis","type":"exact"},{"name":"tumoral calcinosis with hyperphosphatemia","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","type":"related"}],"termid":"MONDO:0100251","xrefs":{"Monarch":{"xref_id":"0100251"}}}


id: PBO:0080374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog A","termid":"PBO:0080374"}


id: GO:0004806
data:
  {"annotated_genes":["SJAG_02907","SJAG_02089","SJAG_01036","SJAG_02487","SJAG_03604","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58512,59993,70154,71915,94284,98825],"is_not":false,"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a triacylglycerol + H2O = a diacylglycerol + a fatty acid + H+.","definition_xrefs":["RHEA:12044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02907":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"triacylglycerol lipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5694109","Reactome:R-HSA-8848339","Reactome:R-HSA-1482777","EC:3.1.1.3","MetaCyc:RXN-19278","Reactome:R-HSA-163551","Reactome:R-HSA-8848338"],"synonyms":[{"name":"GA 56","type":"related"},{"name":"GEH","type":"related"},{"name":"PPL","type":"related"},{"name":"TAG activity","type":"exact"},{"name":"amano AP","type":"related"},{"name":"amano B","type":"related"},{"name":"amano CE","type":"related"},{"name":"amano CES","type":"related"},{"name":"amano P","type":"related"},{"name":"amno N-AP","type":"related"},{"name":"butyrinase activity","type":"related"},{"name":"cacordase activity","type":"related"},{"name":"capalase L","type":"related"},{"name":"glycerol ester hydrolase activity","type":"related"},{"name":"glycerol-ester hydrolase activity","type":"related"},{"name":"heparin releasable hepatic lipase","type":"narrow"},{"name":"hepatic lipase","type":"narrow"},{"name":"hepatic monoacylglycerol acyltransferase","type":"narrow"},{"name":"lipazin","type":"related"},{"name":"liver lipase","type":"narrow"},{"name":"meito MY 30","type":"related"},{"name":"meito sangyo OF lipase","type":"related"},{"name":"post-heparin plasma protamine-resistant lipase","type":"narrow"},{"name":"salt-resistant post-heparin lipase","type":"narrow"},{"name":"steapsin","type":"related"},{"name":"takedo 1969-4-9","type":"related"},{"name":"triacetinase activity","type":"related"},{"name":"triacylglycerol acylhydrolase activity","type":"related"},{"name":"triacylglycerol ester hydrolase activity","type":"related"},{"name":"tributyrase activity","type":"related"},{"name":"tributyrin esterase activity","type":"related"},{"name":"tributyrinase activity","type":"related"},{"name":"triglyceridase activity","type":"related"},{"name":"triglyceride hydrolase activity","type":"related"},{"name":"triglyceride lipase activity","type":"exact"},{"name":"triolein hydrolase activity","type":"related"},{"name":"tween hydrolase activity","type":"related"},{"name":"tween-hydrolyzing esterase activity","type":"related"},{"name":"tweenase activity","type":"related"},{"name":"tweenesterase activity","type":"related"}],"termid":"GO:0004806","terms_by_termid":{"GO:0004806":null}}


id: PBO:0080342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 106 pseudogene","termid":"PBO:0080342"}


id: GO:0075148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of signal transduction in response to host (obsolete GO:0075148)","synonyms":[{"name":"positive regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075148"}


id: PBO:0028842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRC1R","termid":"PBO:0028842"}


id: PBO:0065356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 6","termid":"PBO:0065356"}


id: PR:P87174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dpb4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.09","synonyms":[{"name":"DNA polymerase II subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dpb4","type":"exact"}],"termid":"PR:P87174"}


id: GO:0035313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an epidermal cell along or through a wound gap that contributes to the reestablishment of a continuous epidermis.","definition_xrefs":["PMID:15269788","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wound healing, spreading of cells","termid":"GO:0044319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}


id: PBO:0041228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 50","termid":"PBO:0041228"}


id: RO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s determined by f if and only if s is a type of system, and f is a material entity that is part of s, such that f exerts a strong causal influence on the functioning of s, and the removal of f would cause the collapse of s.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"determined_by_part_of","termid":"RO:0002509"},{"relation_name":"is_a","term_name":"causally_influenced_by","termid":"RO:0002559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determined_by","termid":"RO:0002507"}


id: GO:1903226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23154389","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"positively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodermal cell differentiation","synonyms":[{"name":"activation of endoderm cell differentiation","type":"narrow"},{"name":"activation of endodermal cell differentiation","type":"narrow"},{"name":"positive regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endodermal cell differentiation","type":"exact"},{"name":"up-regulation of endoderm cell differentiation","type":"exact"},{"name":"up-regulation of endodermal cell differentiation","type":"exact"},{"name":"upregulation of endoderm cell differentiation","type":"exact"},{"name":"upregulation of endodermal cell differentiation","type":"exact"}],"termid":"GO:1903226"}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: MONDO:1012869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any heart disorder characterized by pathologically prolonged ventricular action potential duration with sudden cardiac death due to polymorphic vetricular tachycardia that occurs in rabbits due to a mutation in the KCNH2 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:18464931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long QT syndrome, KCNH2-related, rabbit","secondary_identifiers":["OMIA:002333-9986"],"termid":"MONDO:1012869","xrefs":{"Monarch":{"xref_id":"1012869"}}}


id: PBO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 4","termid":"PBO:0071672"}


id: PBO:0088495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (DDK family) Spo4","termid":"PBO:0088495"}


id: MONDO:0018533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Undifferentiated carcinoma of liver and intrahepatic biliary tract is an extremely rare epithelial tumor of the liver and biliary tract which presents heterogenous histological findings and not yet fully defined clinicopathological characteristics. Patients usually present with nonspecific signs and symptoms, such as abdominal pain, nausea, vomiting, anorexia, weight loss and/or jaundice. Invasive growth, high metastatic potential and a rapid clinical course are typically associated.","definition_xrefs":["Orphanet:424970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma of liver and intrahepatic biliary tract","secondary_identifiers":["MEDGEN:1656437","GARD:21788","UMLS:C4749401"],"synonyms":[{"name":"undifferentiated carcinoma of liver and IBT","type":"exact"}],"termid":"MONDO:0018533","xrefs":{"Monarch":{"xref_id":"0018533"}}}


id: PBO:0082662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability","termid":"PBO:0082662"}


id: PBO:0091119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane chaperone for multipass membrane proteins, PAT complex subunit (asterix), Pat10","termid":"PBO:0091119"}


id: PBO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin Cam1","termid":"PBO:0000978"}


id: MONDO:1011645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular arrhythmias and sudden death, non-human animal","secondary_identifiers":["OMIA:001040"],"termid":"MONDO:1011645","xrefs":{"Monarch":{"xref_id":"1011645"}}}


id: GO:0072475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle, is received and converted into a molecular signal, contributing to a mitotic cell cycle spindle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic spindle checkpoint (obsolete GO:0072475)","synonyms":[{"name":"detection of stimulus involved in mitotic cell cycle spindle checkpoint","type":"exact"},{"name":"mitotic cell cycle spindle checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle spindle checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle spindle checkpoint","type":"related"}],"termid":"GO:0072475"}


id: MONDO:0010028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialuria is an extremely rare metabolic disorder described in fewer than 10 patients to date and characterized by variable signs and symptoms, mostly in infancy, including transient failure to thrive, slightly prolonged neonatal jaundice, equivocal or mild hepatomegaly, microcytic anemia, frequent upper respiratory infections, gastroenteritis, dehydration and flat and coarse facies. Learning difficulties and seizures may occur in childhood.","definition_xrefs":["Orphanet:3166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sialic acid metabolism","termid":"MONDO:0017736"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"sialuria","secondary_identifiers":["UMLS:C0342853","icd11.foundation:154329034","ICD9:796.4","MedDRA:10067529","OMIM:269921","SCTID:238051008","GARD:4865","MEDGEN:137980","DOID:3659"],"synonyms":[{"name":"sialuria","type":"exact"},{"name":"sialuria, French type","type":"exact"}],"termid":"MONDO:0010028","xrefs":{"Monarch":{"xref_id":"0010028"}}}


id: PBO:0081157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFPM1 antisense RNA 1","termid":"PBO:0081157"}


id: GO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfate assimilation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter (obsolete GO:0100053)","termid":"GO:0100053"}


id: MONDO:0009967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive osteopetrosis 3","termid":"MONDO:0009818"},{"relation_name":"is_a","term_name":"renal tubular acidosis","termid":"MONDO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal tubular acidosis 3","secondary_identifiers":["OMIM:267200","GARD:15228","MESH:C537759","MEDGEN:336601","UMLS:C1849435"],"synonyms":[{"name":"RTA, bicarbonate-wasting type","type":"exact"},{"name":"RTA, dislocation type","type":"exact"},{"name":"bicarbonate-wasting RTA","type":"related"},{"name":"renal tubular acidosis 3","type":"exact"},{"name":"renal tubular acidosis III","type":"exact"},{"name":"renal tubular acidosis, distal, type 3","type":"related"}],"termid":"MONDO:0009967","xrefs":{"Monarch":{"xref_id":"0009967"}}}


id: PBO:0053486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 461","termid":"PBO:0053486"}


id: PR:G2TRM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18c","synonyms":[{"name":"Spom972h-tam5","type":"exact"},{"name":"transcripts altered in meiosis protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRM7"}


id: MONDO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome X","secondary_identifiers":["GARD:20916","Orphanet:263768","UMLS:C5679687","MEDGEN:1825971"],"synonyms":[{"name":"partial duplication of chromosome type X","type":"exact"},{"name":"partial trisomy of chromosome X","type":"exact"}],"termid":"MONDO:0017008","xrefs":{"Monarch":{"xref_id":"0017008"}}}


id: PBO:0066538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 4","termid":"PBO:0066538"}


id: PBO:0042668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 2","termid":"PBO:0042668"}


id: PBO:0066907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 208","termid":"PBO:0066907"}


id: GO:0010275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form NAD(P)H dehydrogenase complex, which is involved in electron transport from an unidentified electron donor, possibly NAD(P)H or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex assembly","synonyms":[{"name":"NAD(P)H dehydrogenase complex (plastoquinone) assembly","type":"narrow"}],"termid":"GO:0010275"}


id: PBO:0083010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box protein required for 27S rRNA processing; exhibits DNA, RNA and DNA/RNA helicase activities; ATPase activity shows preference for DNA over RNA; DNA helicase activity abolished by mutation in RNA-binding domain","termid":"PBO:0083010"}


id: GO:0000153
data:
  {"annotated_genes":["SJAG_03841","SJAG_01709","SJAG_03345","SJAG_04384","SJAG_01134","SJAG_05274","SJAG_01051"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89611,105669,117547,104330,105184,109944,108046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000153","terms_by_termid":{"GO:0000836":null}}


id: FYPO:0006137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-stearoylglycerophosphocholine (18:0) measured in a cell is higher than normal.","definition_xrefs":["PMID:28667014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level","synonyms":[{"name":"increased 1-stearoylglycerophosphocholine (18:0) accumulation","type":"related"},{"name":"increased cellular 1-stearoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006137"}


id: MONDO:0020246
data:
  {"annotated_genes":["SJAG_02286","SJAG_02194","SJAG_02362","SJAG_02878","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015026"},{"annotations":[86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957264"},{"annotations":[86183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[86813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[87508,87509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02194":null,"SJAG_02286":null,"SJAG_02362":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"inherited vitreoretinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19539","HP:0007773","Orphanet:98668"],"termid":"MONDO:0020246","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0015026":null,"MONDO:0100119":null,"MONDO:0957264":null},"xrefs":{"Monarch":{"xref_id":"0020246"}}}


id: FYPO:0007423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs less frequently than in wild type cells. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PMID:32355220","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gross chromosomal rearrangement","termid":"FYPO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased isochromosome formation","synonyms":[{"name":"decreased isochromosome formation during mitotic cell cycle","type":"related"},{"name":"decreased isochromosome formation during vegetative growth","type":"exact"},{"name":"decreased occurrence of isochromosome formation","type":"exact"},{"name":"reduced isochromosome formation","type":"exact"}],"termid":"FYPO:0007423"}


id: PBO:0067923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 225","termid":"PBO:0067923"}


id: PBO:0109397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 24, pseudogene","termid":"PBO:0109397"}


id: PBO:0028876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_M26_site","termid":"PBO:0028876"}


id: PR:O94368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.02c","synonyms":[{"name":"Spom972h-ppr1","type":"exact"}],"termid":"PR:O94368"}


id: MONDO:0017346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epstein-Barr virus-positive diffuse large B-cell lymphoma of the elderly is a rare form of diffuse large B-cell lymphoma occurring most commonly in patients over the age of 50 (usually between 70-75 years of age), without overt immunodeficiency, and presenting with nodal and extranodal involvement (in sites such as the stomach, lung, skin and pancreas) and B symptoms (fever, night sweats, weight loss). The tumor is characterized by an aggressive course and a short survival rate.","definition_xrefs":["Orphanet:289661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Epstein-Barr virus-positive diffuse large B-cell lymphoma of the elderly","secondary_identifiers":["SCTID:716788007","MEDGEN:397690","NCIT:C80281","UMLS:C2700007","GARD:21150","ICDO:9680/3","icd11.foundation:407807101"],"synonyms":[{"name":"EBV Positive diffuse large B-cell lymphoma of the elderly","type":"exact"},{"name":"EBV-Positive diffuse large B-cell lymphoma, NOS","type":"exact"},{"name":"EBV-positive DLBCL of the elderly","type":"exact"},{"name":"Epstein-Barr Virus Positive diffuse large B-cell lymphoma of the elderly","type":"exact"},{"name":"Senile EBV-associated B-cell lymphoproliferative disorder","type":"exact"},{"name":"age-related EBV Positive B-cell lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0017346","xrefs":{"Monarch":{"xref_id":"0017346"}}}


id: MONDO:0700208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Caliciviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caliciviridae infectious disease, non-human animal","termid":"MONDO:0700208","xrefs":{"Monarch":{"xref_id":"0700208"}}}


id: PBO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UREG (predicted)","termid":"PBO:0005343"}


id: MONDO:0010399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"},{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chromosome Xp21 deletion syndrome","secondary_identifiers":["UMLS:C4505291","GARD:17246","ICD9:277.6","SCTID:297257004","MEDGEN:1373978","OMIM:300679","DOID:0060427","Orphanet:261476"],"synonyms":[{"name":"Complex Glycerol kinase deficiency","type":"related"},{"name":"Del(X)(p21)","type":"exact"},{"name":"Glycerol kinase deficiency-contiguous gene syndrome","type":"exact"},{"name":"Xp21 contiguous gene deletion syndrome","type":"exact"},{"name":"Xp21 microdeletion syndrome","type":"exact"},{"name":"chromosome Xp21 deletion syndrome","type":"exact"},{"name":"complex glycerol kinase deficiency","type":"exact"},{"name":"monosomy Xp21","type":"exact"}],"termid":"MONDO:0010399","xrefs":{"Monarch":{"xref_id":"0010399"}}}


id: PBO:0046956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 78 member A","termid":"PBO:0046956"}


id: MONDO:0024912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the domestic cat (Felis catus or F. domesticus). This term does not include diseases of the so-called big cats such as cheetahs; lions; tigers, cougars, panthers, leopards, and other Felidae for which the heading carnivora is used.","definition_xrefs":["MESH:D002371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat disease","synonyms":[{"name":"Feline disease","type":"related"},{"name":"Feline diseases","type":"related"},{"name":"cat disease","type":"exact"},{"name":"disease, Cat","type":"related"},{"name":"disease, Feline","type":"related"},{"name":"diseases, Cat","type":"related"},{"name":"diseases, Feline","type":"related"}],"termid":"MONDO:0024912","xrefs":{"Monarch":{"xref_id":"0024912"}}}


id: SO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U3_LTR_region","termid":"SO:0000424"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_five_prime_LTR_region","synonyms":[{"name":"U3 5' long term repeat region","type":"exact"},{"name":"U3 five prime LTR region","type":"exact"}],"termid":"SO:0000429"}


id: GO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002586"}


id: PBO:0082772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration; CNM67 has a paralog, ADY3, that arose from the whole genome duplication","termid":"PBO:0082772"}


id: GO:0035318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Extrusion of a cellular projection from the apical membrane of an epithelial cell in an imaginal disc-derived wing. Outgrowth initiates approximately 35 hours after puparium formation from the distal side of the cell, and at this stage the cellular extension is termed a prehair.","definition_xrefs":["PMID:11064425","PMID:8947551","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair outgrowth","synonyms":[{"name":"wing hair outgrowth","type":"exact"},{"name":"wing prehair outgrowth","type":"related"}],"termid":"GO:0035318"}


id: GO:0043696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specialized structure (cell, tissue or organ) loses structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these structures can revert back to the features of their ancestors.","definition_xrefs":["GOC:pg","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dedifferentiation","secondary_identifiers":["Wikipedia:Cellular_differentiation#Dedifferentiation"],"termid":"GO:0043696"}


