# terms

id: MONDO:0002637
data:
  {"annotated_genes":["SJAG_01407","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[86563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"}]},"cv_name":"mondo","definition":"A morphologic finding indicating tissue infiltration by non-neoplastic or neoplastic histiocytes.","definition_xrefs":["NCIT:C3106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"histiocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:HDCN","UMLS:C0019618","MEDGEN:6845","MESH:D015614","NANDO:2100005","DOID:3405"],"synonyms":[{"name":"chronic histiocytosis X","type":"exact"},{"name":"hand Schuller Christian disease","type":"exact"},{"name":"histiocytic and dendritic cell neoplasms","type":"related"},{"name":"histiocytic infiltrate","type":"exact"},{"name":"histiocytic syndrome","type":"exact"}],"termid":"MONDO:0002637","terms_by_termid":{"MONDO:0009756":null,"MONDO:0011871":null,"MONDO:0011873":null},"xrefs":{"Monarch":{"xref_id":"0002637"}}}


id: FYPO:0009113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle polar microtubules during anaphase B does not occur.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle polar microtubules during anaphase B","synonyms":[{"name":"abolished protein localisation to interpolar microtubules during mitotic anaphase B","type":"exact"},{"name":"abolished protein localisation to mitotic spindle polar microtubules during anaphase B","type":"exact"},{"name":"abolished protein localization to interpolar microtubules during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0009113"}


id: GO:0060983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the epicardium acquires specialized features of a cardiac vascular smooth muscle cell. A cardiac vascular smooth muscle cell covers the heart vasculature and lacks transverse striations in its constituent fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac vascular smooth muscle cell differentiation","termid":"GO:0060983"}


id: GO:0005957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete debranching enzyme (obsolete GO:0005957)","synonyms":[{"name":"debranching enzyme","type":"exact"}],"termid":"GO:0005957"}


id: PR:P87297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.05c","synonyms":[{"name":"Spom972h-dad1","type":"exact"},{"name":"outer kinetochore protein dad1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87297"}


id: FYPO:0004566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to caffeine during the second meiotic nuclear division. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to caffeine during meiosis II","synonyms":[{"name":"hypersensitive to caffeine during meiosis II","type":"exact"},{"name":"sensitive to caffeine during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004566"}


id: GO:2001229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to gamma radiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to gamma radiation","termid":"GO:2001228"},{"relation_name":"negatively_regulates","term_name":"response to gamma radiation","termid":"GO:0010332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to gamma radiation","synonyms":[{"name":"negative regulation of response to gamma ray","type":"related"},{"name":"negative regulation of response to gamma-ray photon","type":"related"}],"termid":"GO:2001229"}


id: PBO:0017628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transporter (predicted)","termid":"PBO:0017628"}


id: GO:1901543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901542"},{"relation_name":"negatively_regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"down regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"inhibition of ent-pimara-8(14),15-diene anabolism","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene biosynthesis","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene biosynthetic process","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene formation","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene synthesis","type":"narrow"},{"name":"negative regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901543"}


id: GO:0035457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-alpha stimulus. Interferon-alpha is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-alpha","termid":"GO:0035455"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-alpha","synonyms":[{"name":"cellular response to interferon alfa-n1","type":"related"},{"name":"cellular response to interferon alfa-n3","type":"related"},{"name":"cellular response to leukocyte interferon","type":"exact"},{"name":"cellular response to lymphoblast interferon","type":"exact"},{"name":"cellular response to lymphoblastoid interferon","type":"exact"}],"termid":"GO:0035457"}


id: GO:0120135
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the axoneme that is close to the tip of the cilium.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"distal portion of axoneme","synonyms":[{"name":"distal part of axoneme","type":"exact"}],"termid":"GO:0120135"}


id: FYPO:0006728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication does not occur at one or more origins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic DNA replication initiation","synonyms":[{"name":"abolished mitotic DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic DNA replication initiation during vegetative growth","type":"exact"},{"name":"mitotic DNA replication initiation abolished","type":"exact"}],"termid":"FYPO:0006728"}


id: PBO:0080789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC1 N-terminal domain containing 1, N-terminal like","termid":"PBO:0080789"}


id: PBO:0111691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 QL1","termid":"PBO:0111691"}


id: PBO:0077921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 12","termid":"PBO:0077921"}


id: MONDO:0014667
data:
  {"annotated_genes":["SJAG_05199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85454],"is_not":false,"summary":null,"term":"MONDO:0014667"}]},"cv_name":"mondo","definition":"Any fatal infantile encephalocardiomyopathy in which the cause of the disease is a mutation in the COA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal infantile encephalocardiomyopathy","termid":"MONDO:0015487"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004069","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080359","UMLS:C4225154","MEDGEN:903495","GARD:18572","OMIM:616500"],"synonyms":[{"name":"CEMCOX3","type":"related"},{"name":"COA5 fatal infantile encephalocardiomyopathy","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome C oxidase deficiency type 3","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","type":"exact"},{"name":"fatal infantile encephalocardiomyopathy caused by mutation in COA5","type":"exact"},{"name":"mitochondrial complex IV, deficiency, nuclear type 9","type":"exact"}],"termid":"MONDO:0014667","terms_by_termid":{"MONDO:0014667":null},"xrefs":{"Monarch":{"xref_id":"0014667"}}}


id: PBO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_for","termid":"PBO:0034322"}


id: GO:0010984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of lipoprotein particle clearance. Lipoprotein particle clearance is the process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"}


id: PBO:0085669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; likely involved directly in dityrosine layer assembly; induced during sporulation; repressed during vegetative growth by Sum1p and Hst1p; sequence similar to adjacent ORF, IRC18/YJL037W, and the irc18 loh1 double mutant exhibits reduced dityrosine fluorescence relative to the single mutants; SWAT-GFP and mCherry fusion proteins localize to the cytosol; proposed role in maintenance of genome integrity","termid":"PBO:0085669"}


id: GO:0140056
data:
  {"annotated_genes":["SJAG_03170","SJAG_01697","SJAG_03005","SJAG_02699","SJAG_03416","SJAG_04966","SJAG_02320","SJAG_03536","SJAG_01772","SJAG_04370","SJAG_05184","SJAG_02587","SJAG_01598","SJAG_04417","SJAG_00053","SJAG_01116","SJAG_02626","SJAG_01168","SJAG_04023","SJAG_04978","SJAG_00380","SJAG_01564","SJAG_01929","SJAG_01324","SJAG_04413","SJAG_01633","SJAG_00029","SJAG_01437","SJAG_04221","SJAG_03848","SJAG_00171","SJAG_03552","SJAG_00280","SJAG_03710","SJAG_01305","SJAG_03347","SJAG_03499","SJAG_03247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[61500,91841,97813,72273,62365,112051,90766,118555,60593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[70838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[117007,70365,70283,75141,80439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[80687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[107401,115596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[94683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[117945,78084,99876,100679,76576,110035,113077,110192,72405,101486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[80546,70185,92692,60353,75463,90935,80172,118611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane docking","termid":"GO:0022406"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03005":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"organelle localization by membrane tethering","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140056","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: PBO:0049002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1","termid":"PBO:0049002"}


id: PBO:0090431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd1/2 complex PHD finger protein Phf2","termid":"PBO:0090431"}


id: PBO:0062135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 2 pseudogene","termid":"PBO:0062135"}


id: MOD:00968
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CM-Cys vs PAM-Cys","termid":"MOD:00968"}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: PBO:0047048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member C","termid":"PBO:0047048"}


id: GO:0052818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heteroglycan + GDP-mannose = (1->3)-alpha-D-mannosylheteroglycan + GDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroglycan 3-alpha-mannosyltransferase activity (obsolete GO:0052818)","synonyms":[{"name":"heteropolysaccharide 3-alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0052818"}


id: PBO:0088500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-amino-6-(5-phosphoribosylamino) uracil reductase Rib7","termid":"PBO:0088500"}


id: MONDO:0008337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial pterygium of the conjunctiva is a rare form of pterygium, which develops in early adulthood, characterized by a wing-like bulbar thickening of the conjunctiva in the interpalpebral fissure area that can be cured by surgical excision.","definition_xrefs":["Orphanet:2989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pterygium","termid":"MONDO:0005085"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"familial pterygium of the conjunctiva","secondary_identifiers":["OMIM:178000","MEDGEN:896736","GARD:4569","MESH:C566740","ICD10CM:H11.0","UMLS:C4274782"],"synonyms":[{"name":"pterygium of conjunctiva and cornea","type":"related"},{"name":"pterygium of the conjunctiva and cornea","type":"related"}],"termid":"MONDO:0008337","xrefs":{"Monarch":{"xref_id":"0008337"}}}


id: MONDO:0032635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 32","secondary_identifiers":["GARD:18067","DOID:0112080","MEDGEN:1648336","OMIM:618252","UMLS:C4748839"],"synonyms":[{"name":"MC1DN32","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 32","type":"related"}],"termid":"MONDO:0032635","xrefs":{"Monarch":{"xref_id":"0032635"}}}


id: PBO:0005346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease, yapsin Yps1","termid":"PBO:0005346"}


id: PATO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001174 urine composition (obsolete PATO:0001174)","termid":"PATO:0001174"}


id: PBO:0086211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds eIF4G and has a role in repression of translation; has an RGG motif; found in cytoplasmic P bodies; binds to mRNAs under glucose starvation stress, most often in the 5' UTR; found associated with small nucleolar RNAs snR10 and snR11; SBP1 has a paralog, RNP1, that arose from the whole genome duplication","termid":"PBO:0086211"}


id: PATO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000013 relative age (obsolete PATO:0000013)","termid":"PATO:0000013"}


id: MONDO:0100363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any herpes simplex type 2 infectious disease that involves the genitals.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genital herpes","termid":"MONDO:0005770"},{"relation_name":"is_a","term_name":"herpes simplex type 2 infectious disease","termid":"MONDO:0100360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genital herpes simplex type 2 infectious disorder","termid":"MONDO:0100363","xrefs":{"Monarch":{"xref_id":"0100363"}}}


id: MONDO:0019340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleroderma is a rare autoimmune connective tissue disorder characterized by abnormal hardening of the skin and, sometimes, other organs. It is classified into two main forms: localized scleroderma and systemic sclerosis (SSc), the latter comprising three subsets; diffuse cutaneous SSc (dcSSc), limited cutaneous SSc (lcSSc) and limited SSc (lSSc).","definition_xrefs":["Orphanet:801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"scleroderma","secondary_identifiers":["NCIT:C26746","HP:0100324","DOID:419","GARD:18705","MEDGEN:3770","UMLS:C0011644","MedDRA:10039710","EFO:1001993"],"synonyms":[{"name":"dermatosclerosis","type":"exact"},{"name":"scleroderma","type":"exact"},{"name":"scleroderma (disease)","type":"exact"}],"termid":"MONDO:0019340","xrefs":{"Monarch":{"xref_id":"0019340"}}}


id: PBO:0042545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 10","termid":"PBO:0042545"}


id: PBO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf29","termid":"PBO:0004050"}


id: GO:0106134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell contraction.","definition_xrefs":["PMID:19525381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell contraction","termid":"GO:0106134"}


id: MONDO:0859147
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86878],"is_not":false,"summary":null,"term":"MONDO:0859147"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"Marbach-Rustad progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1784907","OMIM:619322","Orphanet:659873","UMLS:C5543388"],"synonyms":[{"name":"LEMD2-associated nuclear envelopathy with early progeroid appearance","type":"exact"},{"name":"Marbach-Rustad progeroid syndrome","type":"exact"},{"name":"Wormian bones-micrognathia-abnormal dentition-progeroid syndrome","type":"exact"}],"termid":"MONDO:0859147","terms_by_termid":{"MONDO:0859147":null},"xrefs":{"Monarch":{"xref_id":"0859147"}}}


id: GO:0050467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + pentalenene.","definition_xrefs":["EC:4.2.3.7","RHEA:18081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pentalenene synthase activity","secondary_identifiers":["MetaCyc:PENTALENENE-SYNTHASE-RXN","KEGG_REACTION:R02305"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, pentalenene-forming)","type":"related"},{"name":"2-trans,6-trans-farnesyldiphosphate diphosphate-lyase (cyclizing, pentalenene-forming)","type":"related"},{"name":"pentalenene synthetase activity","type":"related"}],"termid":"GO:0050467"}


id: FYPO:0006355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription begins later than normal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during glucose starvation","termid":"FYPO:0006354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"delayed onset of transcription during glucose starvation","synonyms":[{"name":"delayed onset of transcription during cellular response to glucose starvation","type":"exact"},{"name":"delayed onset of transcription during glucose depletion","type":"exact"},{"name":"delayed onset of transcription during glucose deprivation","type":"exact"},{"name":"delayed onset of transcription during glucose limitation","type":"related"},{"name":"delayed onset of transcription in response to glucose starvation","type":"exact"},{"name":"delayed transcription during glucose starvation","type":"exact"}],"termid":"FYPO:0006355"}


id: PBO:0056413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 10","termid":"PBO:0056413"}


id: PBO:0069887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1176, pseudogene","termid":"PBO:0069887"}


id: FYPO:0004114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with abnormal size, shape, or structure.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000004","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, abnormal septum morphology","synonyms":[{"name":"inviable after spore germination, undivided cell, abnormal septum morphology","type":"exact"},{"name":"inviable after spore germination, without cell division, abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, without cell division, abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, abnormal septum morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004114"}


id: GO:0010416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an arabinoxylan, a polymer containing a beta-1,4-linked D-xylose backbone decorated with arabinose side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"arabinoxylan-containing compound metabolic process","synonyms":[{"name":"arabinoxylan metabolic process","type":"related"},{"name":"arabinoxylan metabolism","type":"related"}],"termid":"GO:0010416"}


id: GO:1903449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of androst-4-ene-3,17-dione.","definition_xrefs":["GOC:mr","GO_REF:0000068","GOC:TermGenie","PMID:2028480","PMID:4149619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"androst-4-ene-3,17-dione biosynthetic process","synonyms":[{"name":"androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"androst-4-ene-3,17-dione formation","type":"exact"},{"name":"androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"androstenedione biosynthetic process","type":"exact"}],"termid":"GO:1903449"}


id: PBO:0084730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; 2-oxodicarboxylate transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochondrial matrix to the cytosol for lysine and glutamate biosynthesis and lysine catabolism; suppresses, in multicopy, an fmc1 null mutation; ODC1 has a paralog, ODC2, that arose from the whole genome duplication","termid":"PBO:0084730"}


id: PBO:0085819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0085819"}


id: GO:0007528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development","synonyms":[{"name":"NMJ stability","type":"related"},{"name":"neuromuscular junction organization","type":"exact"},{"name":"neuromuscular junction stability","type":"related"}],"termid":"GO:0007528"}


id: GO:1905439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 6'-sulfate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22365850","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chondroitin 6'-sulfate","termid":"GO:1905439"}


id: PBO:0034399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_formation_of","termid":"PBO:0034399"}


id: PBO:0038714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 9","termid":"PBO:0038714"}


id: PBO:0024839
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SUV3","termid":"PBO:0024839"}


id: PBO:0036356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit Not3/5","termid":"PBO:0036356"}


id: PBO:0057299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513c","termid":"PBO:0057299"}


id: MONDO:0004063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iris melanoma characterized by the presence of intermediate cells which are similar to but smaller than epithelioid cells.","definition_xrefs":["NCIT:C6101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate cell type uveal melanoma","termid":"MONDO:0004062"},{"relation_name":"is_a","term_name":"iris melanoma","termid":"MONDO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"intermediate cell type iris melanoma","secondary_identifiers":["DOID:6993","MEDGEN:233564","UMLS:C1334210"],"synonyms":[{"name":"Intermediate cell type iris melanoma","type":"exact"},{"name":"intermediate cell type uveal melanoma of iris","type":"exact"},{"name":"iris intermediate cell type uveal melanoma","type":"exact"},{"name":"iris mixed cell melanoma","type":"related"}],"termid":"MONDO:0004063","xrefs":{"Monarch":{"xref_id":"0004063"}}}


id: GO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + H2O = GMP + mannose-1-phosphate.","definition_xrefs":["PMID:16766526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP-mannose hydrolase activity","synonyms":[{"name":"GDP-mannose pyrophosphatase activity","type":"related"}],"termid":"GO:0052751"}


id: FYPO:0002725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"decreased alpha-aminoadipate reductase activity","type":"exact"},{"name":"reduced L-aminoadipate-semialdehyde dehydrogenase activity","type":"exact"},{"name":"reduced alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0002725"}


id: PBO:0028447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity,_glutathione_synthetase_to_homoglutathione_synthetase_activity","termid":"PBO:0028447"}


id: PBO:0029489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_shape,_normal_cell_size_(obsolete_FYPO:0002226)","termid":"PBO:0029489"}


id: PBO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 6","termid":"PBO:0048006"}


id: PBO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_trichostatin_A","termid":"PBO:0031052"}


id: GO:0070502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds, that forms all or part of a bacterial capsule.","definition_xrefs":["PMID:16689787","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsule organization","termid":"GO:0045230"},{"relation_name":"is_a","term_name":"poly-gamma-glutamate biosynthetic process","termid":"GO:0070501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"capsule poly-gamma-glutamate biosynthetic process","synonyms":[{"name":"capsular poly-gamma-glutamate biosynthetic process","type":"exact"},{"name":"capsule poly-gamma-glutamate anabolism","type":"exact"},{"name":"capsule poly-gamma-glutamate biosynthesis","type":"exact"},{"name":"capsule poly-gamma-glutamate formation","type":"exact"},{"name":"capsule poly-gamma-glutamate synthesis","type":"exact"}],"termid":"GO:0070502"}


id: PATO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"decreased rate","termid":"PATO:0000911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased frequency","synonyms":[{"name":"infrequent","type":"related"},{"name":"low frequency","type":"exact"}],"termid":"PATO:0000381"}


id: PBO:0047582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 2","termid":"PBO:0047582"}


id: PR:O42899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SCO1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12151:SF0","PRO:DNx","OMA:SCHPO02563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sco1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.06","secondary_identifiers":["UniProtKB:O42899"],"synonyms":[{"name":"Spom972h-SCO1","type":"exact"}],"termid":"PR:O42899"}


id: MONDO:0043494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting an artery.","definition_xrefs":["NCIT:C34399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteritis","secondary_identifiers":["MEDGEN:13916","MESH:D001167","SCTID:52089001","UMLS:C0003860","HP:0012089","EFO:0009011"],"synonyms":[{"name":"Arteritides","type":"related"},{"name":"Inflammation, arterial","type":"related"},{"name":"arterial Inflammation","type":"related"},{"name":"arteritis","type":"exact"},{"name":"artery inflammation","type":"exact"},{"name":"inflammation of artery","type":"exact"}],"termid":"MONDO:0043494","xrefs":{"Monarch":{"xref_id":"0043494"}}}


id: MONDO:0018977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy associated with IgM monoclonal gammapathy (MG) with anti-MAG (myelin-associated-glycoprotein) activity is a demyelinating polyneuropathy characterized clinically by sensory ataxia, tremor, paresthesia, and impaired gait.","definition_xrefs":["Orphanet:639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy associated with IgM monoclonal gammapathy with anti-MAG","secondary_identifiers":["GARD:13173","MEDGEN:1434346","UMLS:C1736154"],"synonyms":[{"name":"anti-MAG neuropathy","type":"exact"},{"name":"neuropathy associated with monoclonal IgM antibodies to myelin-associated glycoprotein","type":"exact"}],"termid":"MONDO:0018977","xrefs":{"Monarch":{"xref_id":"0018977"}}}


id: MONDO:0014716
data:
  {"annotated_genes":["SJAG_03067","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86372,86373],"is_not":false,"summary":null,"term":"MONDO:0014716"}]},"cv_name":"mondo","definition":"A rare multiple congenital anomalies/dysmorphic syndrome with intellectual disability, characterized by macrocephaly, intellectual disability, seizures, dysmorphic facial features (including tall forehead, downslanting palpebral fissures, hypertelorism, depressed nasal bridge, and macrostomia), megalencephaly, and small thorax. Other reported features are umbilical hernia, muscular hypotonia, global developmental delay, autistic behavior, and café-au-lait spots, among others.","definition_xrefs":["Orphanet:457485"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"macrocephaly-intellectual disability-neurodevelopmental disorder-small thorax syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:13636","MEDGEN:899689","UMLS:C4225259","OMIM:616638","NORD:91167"],"synonyms":[{"name":"MINDS syndrome","type":"exact"},{"name":"SKS","type":"related"},{"name":"SMITH-Kingsmore syndrome","type":"related"},{"name":"Smith-Kingsmore Syndrome","type":"exact"},{"name":"Smith-Kingsmore syndrome","type":"exact"},{"name":"macrocephaly, seizures, intellectual disability, umbilical hernia, and Facial Dysmorphism","type":"related"},{"name":"macrocephaly, seizures, mental retardation, umbilical hernia, and Facial Dysmorphism","type":"related"}],"termid":"MONDO:0014716","terms_by_termid":{"MONDO:0014716":null},"xrefs":{"Monarch":{"xref_id":"0014716"}}}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: GO:0018068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to L-2',4',5'-topaquinone, characteristic of the active site of copper amine oxidases.","definition_xrefs":["RESID:AA0147"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-2',4',5'-topaquinone biosynthetic process from peptidyl-tyrosine (obsolete GO:0018068)","synonyms":[{"name":"peptidyl-L-2',4',5'-topaquinone anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018068"}


id: PBO:0056414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF10 divergent transcript","termid":"PBO:0056414"}


id: _global:qualifier
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualifier","secondary_identifiers":["RO:0002573"],"termid":"_global:qualifier"}


id: GO:0015441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + beta-glucan(in) = ADP + phosphate + beta-glucan(out).","definition_xrefs":["RHEA:18453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"},{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type beta-glucan transporter activity","secondary_identifiers":["MetaCyc:3.6.3.42-RXN","EC:7.5.2.3"],"synonyms":[{"name":"ABC-type beta-glucan transporter","type":"related"},{"name":"ATP-dependent beta-glucan transporter activity","type":"related"},{"name":"ATPase-coupled beta-glucan transporter activity","type":"related"},{"name":"beta-glucan ABC transporter","type":"exact"},{"name":"beta-glucan-transporting ATPase activity","type":"related"}],"termid":"GO:0015441"}


id: GO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland development","termid":"GO:0030878"}


id: PBO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing_during_vegetative_growth","termid":"PBO:0036125"}


id: GO:0140633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a CARD8 inflammasome complex.","definition_xrefs":["PMID:33420028","PMID:33420033","PMID:33542150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"CARD8 inflammasome complex assembly","termid":"GO:0140633"}


id: PBO:0082652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Shu1, Csm2, Shu2, and promotes error-free DNA repair; promotes Rad51p filament assembly; Shu complex mediates inhibition of Srs2p function; Psy3p and Csm2p contain similar DNA-binding regions which work together to form a single DNA binding site; deletion of PSY3 results in a mutator phenotype; deletion increases sensitivity to anticancer drugs oxaliplatin and cisplatin but not mitomycin C","termid":"PBO:0082652"}


id: MONDO:0043287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstruction of the blood flow in the superior vena cava caused by a malignant neoplasm, thrombosis, or aneurysm. It is a medical emergency requiring immediate treatment. Signs and symptoms include swelling and cyanosis of the face, neck, and upper arms, cough, orthopnea, and headache.","definition_xrefs":["NCIT:C3396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superior vena cava syndrome","secondary_identifiers":["UMLS:C0038833","MEDGEN:52576","MESH:D013479","SCTID:63363004"],"synonyms":[{"name":"SVC obstruction","type":"related"},{"name":"SVC syndrome","type":"related"},{"name":"SVCS","type":"related"},{"name":"superior vena cava obstruction","type":"related"},{"name":"superior vena cava syndrome","type":"exact"},{"name":"superior vena cava thrombosis","type":"related"}],"termid":"MONDO:0043287","xrefs":{"Monarch":{"xref_id":"0043287"}}}


id: GO:0002394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the gut-associated lymphoid tissue (GALT).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"},{"relation_name":"is_a","term_name":"tolerance induction in mucosal-associated lymphoid tissue","termid":"GO:0002401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in gut-associated lymphoid tissue","synonyms":[{"name":"oral tolerance","type":"related"},{"name":"tolerance induction in GALT","type":"exact"}],"termid":"GO:0002394"}


id: PBO:0004450
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pcl-Seven like Cyclin","termid":"PBO:0004450"}


id: PBO:0055337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2765","termid":"PBO:0055337"}


id: PBO:0064171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group V","termid":"PBO:0064171"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: RO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the relationship holds based on the presence or absence of statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_dependence_to","termid":"RO:0002609"}


id: PBO:0026830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026830"}


id: PBO:0030094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_bipolar_mitotic_spindle","termid":"PBO:0030094"}


id: GO:0007231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated in response to osmotic change.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"osmosensory signaling pathway","synonyms":[{"name":"osmolarity sensing","type":"exact"},{"name":"osmolarity sensing signaling pathway","type":"exact"},{"name":"osmolarity sensing signalling pathway","type":"exact"},{"name":"osmosensory signal transduction","type":"exact"},{"name":"osmosensory signalling pathway","type":"exact"},{"name":"signal transduction during osmotic stress","type":"exact"}],"termid":"GO:0007231"}


id: GO:1901566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organonitrogen compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organonitrogen compound biosynthetic process (obsolete GO:1901566)","termid":"GO:1901566"}


id: PBO:0109022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 2","termid":"PBO:0109022"}


id: PBO:0066270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member D","termid":"PBO:0066270"}


id: PATO:0000893
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000893 backcross fertility value (obsolete PATO:0000893)","termid":"PATO:0000893"}


id: GO:0034861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzothiazole-2-sulfonate + H2O = 2-hydroxybenzothiazole + HSO3-.","definition_xrefs":["UM-BBD_reactionID:r1290"],"gene_count":0,"genotype_count":0,"name":"obsolete benzothiazole-2-sulfonate hydrolase activity (obsolete GO:0034861)","termid":"GO:0034861"}


id: GO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2, the adaptor protein SHC and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["PMID:7798267","GOC:mah","PMID:8940013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"EGFR-Shc-Grb2-Sos complex","termid":"GO:0070621"}


id: PBO:0012310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase (predicted)","termid":"PBO:0012310"}


id: MONDO:0700149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that affects dogs. It arises from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels.","definition_xrefs":["NCIT:C128195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine sarcoma","termid":"MONDO:0700149","xrefs":{"Monarch":{"xref_id":"0700149"}}}


id: MONDO:0005859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of leishmaniasis that is transmitted through the bite of female phlebotomine sand flies or after exposure to leishmania parasites. It is characterized by skin lesions at the site of insect bite which typically develop within weeks or months after exposure. The lesions typically progress from small papules to open sores with raised borders and central ulcers which can be covered with scales or crust.","definition_xrefs":["NCIT:C34769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leishmaniasis","termid":"MONDO:0011989"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucocutaneous leishmaniasis","secondary_identifiers":["EFO:0007379","DOID:9155","ICD10CM:B55.2","icd11.foundation:1942095878","MESH:D007897","UMLS:C1328252","MEDGEN:233065","ICD9:085.5"],"synonyms":[{"name":"American cutaneous leishmaniasis","type":"exact"},{"name":"American mucocutaneous leishmaniasis","type":"exact"},{"name":"New World cutaneous leishmaniasis","type":"exact"},{"name":"cutaneous leishmaniasis, American","type":"exact"},{"name":"mucocutaneous leishmaniasis, (American)","type":"exact"},{"name":"mucocutaneous leishmaniasis, American","type":"exact"}],"termid":"MONDO:0005859","xrefs":{"Monarch":{"xref_id":"0005859"}}}


id: PBO:0080844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 8","termid":"PBO:0080844"}


id: FYPO:0004840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which high-affinity import of glucose into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucose import","termid":"FYPO:0001827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal high-affinity glucose import","synonyms":[{"name":"abnormal high-affinity glucose import during mitotic cell cycle","type":"related"},{"name":"abnormal high-affinity glucose import during vegetative growth","type":"exact"},{"name":"abnormal high-affinity glucose import into cell","type":"exact"},{"name":"abnormal high-affinity glucose uptake","type":"exact"}],"termid":"FYPO:0004840"}


id: PBO:0076941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor 2","termid":"PBO:0076941"}


id: PBO:0040048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 4","termid":"PBO:0040048"}


id: MONDO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fatty liver disease, nonalcoholic (obsolete MONDO:0000031)","termid":"MONDO:0000031","xrefs":{"Monarch":{"xref_id":"0000031"}}}


id: GO:0007264
data:
  {"annotated_genes":["SJAG_03376","SJAG_00526","SJAG_01464","SJAG_06270","SJAG_00229","SJAG_04597","SJAG_04329","SJAG_03592","SJAG_04464","SJAG_00078","SJAG_01805","SJAG_04455","SJAG_03048","SJAG_04462","SJAG_03361","SJAG_02379","SJAG_03353","SJAG_03631","SJAG_04468","SJAG_00082","SJAG_01386","SJAG_03488","SJAG_03342","SJAG_02232","SJAG_03681","SJAG_02520","SJAG_01790","SJAG_02169","SJAG_02514","SJAG_00883","SJAG_04943","SJAG_04776","SJAG_03508","SJAG_03936","SJAG_00600","SJAG_01188"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72546],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[71953],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0035024"},{"annotations":[110553,93288,91084,92091,105413,107912,95999,107604,93820,101636,107469,116293,93204,73150,99952],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[102747,110909,87887,94169,90358],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[111401,105433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031291"},{"annotations":[75265,70301],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032483"},{"annotations":[113756,104867,90320],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"},{"annotations":[75703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007266"},{"annotations":[74548,94778,101306,106761,107514,89598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031028"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_02520":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03361":null,"SJAG_03376":null,"SJAG_03488":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04464":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"small GTPase-mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-187706","Reactome:R-HSA-194315"],"synonyms":[{"name":"Ras family protein signal transduction","type":"narrow"},{"name":"small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0007264","terms_by_termid":{"GO:0007266":null,"GO:0031028":null,"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0031291":null,"GO:0032483":null,"GO:0035024":null,"GO:0046580":null}}


id: PBO:0109191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh4","termid":"PBO:0109191"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: GO:0071509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in conjugation with cellular fusion (obsolete GO:0071509)","synonyms":[{"name":"activation of MAP kinase kinase activity during conjugation with cellular fusion","type":"exact"},{"name":"activation of MAPKK activity involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, activation of MAP kinase kinase activity","type":"exact"},{"name":"conjugation with cellular fusion, activation of MAPKK activity","type":"exact"}],"termid":"GO:0071509"}


id: PBO:0116597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTRA1 and ARMS2 antisense RNA 1","termid":"PBO:0116597"}


id: PBO:0110383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL12 pseudogene 1","termid":"PBO:0110383"}


id: PBO:0067414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 525, pseudogene","termid":"PBO:0067414"}


id: GO:0048927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast support cell differentiation","termid":"GO:0048927"}


id: PBO:0091301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript retaining intron IV represents 15% of total mRNA","termid":"PBO:0091301"}


id: PBO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 2","termid":"PBO:0046002"}


id: PBO:0047984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2","termid":"PBO:0047984"}


id: PBO:0074467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3A","termid":"PBO:0074467"}


id: PBO:0027305
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_transferase_activity","termid":"PBO:0027305"}


id: FYPO:0005489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the vacuolar membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to vacuole","termid":"FYPO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to vacuolar membrane","synonyms":[{"name":"ectopic protein localization to vacuolar membrane","type":"exact"},{"name":"protein mislocalised to vacuolar membrane","type":"exact"},{"name":"protein mislocalised to vacuolar membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to vacuolar membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuole membrane","type":"exact"}],"termid":"FYPO:0005489"}


id: FYPO:0002511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein palmitoylation during meiosis","synonyms":[{"name":"abolished protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"protein palmitoylation abolished during meiosis","type":"exact"},{"name":"protein palmitoylation absent during meiosis","type":"exact"}],"termid":"FYPO:0002511"}


id: GO:0098032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fiber attached to the collar structure of some icosahedral viral capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, fiber","termid":"GO:0098022"},{"relation_name":"part_of","term_name":"icosahedral viral capsid, collar","termid":"GO:0098031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar fiber","termid":"GO:0098032"}


id: GO:0036056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["GOC:sart","PMID:18971929","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filtration diaphragm","termid":"GO:0036056"}


id: GO:0019161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha,omega-diamine + 2-oxoglutarate = an omega-aminoaldehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"diamine transaminase activity","secondary_identifiers":["RHEA:18217","MetaCyc:DIAMTRANSAM-RXN"],"synonyms":[{"name":"amine transaminase activity","type":"related"},{"name":"amine-ketoacid transaminase activity","type":"related"},{"name":"diamine aminotransferase activity","type":"exact"},{"name":"diamine-ketoglutaric transaminase activity","type":"related"},{"name":"diamine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0019161"}


id: GO:0051111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-adenosine)-L-histidine (otherwise known as tau-AMP-histidine, tele-AMP-histidine) or peptidyl-3'-(phospho-5'-adenosine)-L-histidine (otherwise known as pi-AMP-histidine, pros-AMP-histidine).","definition_xrefs":["RESID:AA0371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine adenylylation","termid":"GO:0051111"}


id: PBO:0071996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 25","termid":"PBO:0071996"}


id: PATO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased force","synonyms":[{"name":"decreased force amplitude","type":"exact"}],"termid":"PATO:0002246"}


id: PBO:0041460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf88B (pseudogene)","termid":"PBO:0041460"}


id: PR:000064868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphothreonine at the fourth position of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:31276588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-T4)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 7 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:7","type":"exact"},{"name":"T4P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"rpb1/Phos(CTD-T4)","type":"exact"}],"termid":"PR:000064868"}


id: FYPO:0000629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis is abnormal. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal apoptotic process","synonyms":[{"name":"abnormal apoptosis","type":"narrow"}],"termid":"FYPO:0000629"}


id: PR:O13800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdl1 gene.","definition_xrefs":["UniProtKB:O13800","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rdl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.03c","synonyms":[{"name":"RAD51D-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rdl1","type":"exact"}],"termid":"PR:O13800"}


id: GO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol.","definition_xrefs":["EC:3.1.4.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase D activity","termid":"GO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"glycosylphosphatidylinositol phospholipase D activity","secondary_identifiers":["Reactome:R-HSA-8940388","RHEA:10832","MetaCyc:GLYCOPROTEIN-PHOSPHOLIPASE-D-RXN"],"synonyms":[{"name":"GPI-PLD activity","type":"related"},{"name":"glycoprotein phospholipase D activity","type":"exact"},{"name":"glycoprotein-phosphatidylinositol phosphatidohydrolase activity","type":"related"},{"name":"phosphatidylinositol phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-glycan-specific phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-specific phospholipase D activity","type":"related"}],"termid":"GO:0004621"}


id: GO:0035834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole alkaloid metabolic process","synonyms":[{"name":"indole alkaloid metabolism","type":"exact"}],"termid":"GO:0035834"}


id: MONDO:0100054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic anaphylaxis is a rare form of anaphylaxis for which triggers cannot be identified despite a detailed history and careful diagnostic assessment.","definition_xrefs":["PMID:28890861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphylaxis","termid":"MONDO:0100053"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"idiopathic anaphylaxis","secondary_identifiers":["MEDGEN:595022","UMLS:C0413235","SCTID:241954008"],"termid":"MONDO:0100054","xrefs":{"Monarch":{"xref_id":"0100054"}}}


id: PBO:0069470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 737, pseudogene","termid":"PBO:0069470"}


id: PR:Q9Y7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Nogo-B receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03491","PANTHER:PTHR21528:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit nus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.06c","secondary_identifiers":["UniProtKB:Q9Y7K8"],"synonyms":[{"name":"Spom972h-NUS1","type":"exact"},{"name":"UDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"di-trans,poly-cis-decaprenylcistransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"undecaprenyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7K8"}


id: PBO:0048159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FZD4 divergent transcript","termid":"PBO:0048159"}


id: PBO:0026904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0026904"}


id: MONDO:0010656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked dominant condition caused by mutation(s) in the IQSEC2 gene, encoding IQ motif and SEC7 domain-containing protein 2. It is characterized by substantially impaired intellectual functioning and behavioral abnormalities.","definition_xrefs":["NCIT:C133729"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 1","secondary_identifiers":["MESH:C567906","OMIM:309530","UMLS:C2931498","Orphanet:397933","DOID:0112038","GARD:22699","MEDGEN:444070","MESH:C564489"],"synonyms":[{"name":"IQSEC2","type":"related"},{"name":"IQSEC2-related disorder","type":"exact"},{"name":"IQSEC2-related epilepsy","type":"related"},{"name":"IQSEC2-related intellectual disability","type":"related"},{"name":"IQSEC2-related syndromic intellectual disability","type":"exact"},{"name":"MRX","type":"exact"},{"name":"MRX1","type":"exact"},{"name":"MRX78","type":"exact"},{"name":"X-linked intellectual disability 1","type":"related"},{"name":"X-linked intellectual disability 1/78","type":"related"},{"name":"X-linked intellectual disability 78","type":"related"},{"name":"intellectual developmental disorder, X-linked 1, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 1","type":"exact"},{"name":"mental retardation, X-linked 1","type":"exact"},{"name":"mental retardation, X-linked 18","type":"exact"},{"name":"mental retardation, X-linked 78","type":"exact"},{"name":"mental retardation, X-linked type 1","type":"exact"},{"name":"severe intellectual disability-progressive postnatal microcephaly-midline stereotypic hand movements syndrome","type":"related"}],"termid":"MONDO:0010656","xrefs":{"Monarch":{"xref_id":"0010656"}}}


id: GO:0008496
data:
  {"annotated_genes":["SJAG_05272","SJAG_04850","SJAG_00310","SJAG_02711","SJAG_04851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57550,57910,58149,63206,97288],"is_not":false,"summary":null,"term":"GO:0008496"}]},"cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->6)-alpha-D-mannosidic linkages in unbranched (1->6)-mannans.","definition_xrefs":["EC:3.2.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_02711":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.101-RXN","Reactome:R-HSA-6799581"],"synonyms":[{"name":"1,6-alpha-D-mannan mannanohydrolase activity","type":"related"},{"name":"1,6-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"endo-1,6-beta-mannanase activity","type":"related"},{"name":"endo-alpha-1->6-D-mannanase activity","type":"related"},{"name":"endo-alpha-D-mannosidase activity","type":"exact"},{"name":"exo-1,6-beta-mannanase activity","type":"related"},{"name":"mannan endo-1,6-beta-mannosidase activity","type":"related"}],"termid":"GO:0008496","terms_by_termid":{"GO:0008496":null}}


id: PBO:0043212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 5","termid":"PBO:0043212"}


id: GO:0051775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah","PMID:15131240","PMID:16987039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to redox state","secondary_identifiers":["GO:0006980"],"synonyms":[{"name":"redox signal response","type":"exact"}],"termid":"GO:0051775"}


id: PBO:0030360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_hypoxia","termid":"PBO:0030360"}


id: GO:1902632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23223304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"positively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane hyperpolarization","synonyms":[{"name":"activation of membrane hyperpolarization","type":"narrow"},{"name":"up regulation of membrane hyperpolarization","type":"exact"},{"name":"up-regulation of membrane hyperpolarization","type":"exact"},{"name":"upregulation of membrane hyperpolarization","type":"exact"}],"termid":"GO:1902632"}


id: GO:0120313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oocyte karyosome formation, the chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:33382409","GOC:ha","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oocyte karyosome formation","termid":"GO:0030717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of oocyte karyosome formation","termid":"GO:0120313"}


id: PBO:0086973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase 1 (Glc7p); involved in glycogen metabolism and chromosome segregation; proposed to regulate Glc7p activity via conformational alteration; ortholog of the mammalian protein phosphatase inhibitor 2; protein abundance increases in response to DNA replication stress","termid":"PBO:0086973"}


id: PR:P36581
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calnexin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11073:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.11c","secondary_identifiers":["UniProtKB:P36581"],"synonyms":[{"name":"SPAC3C7.11c","type":"related"},{"name":"Spom972h-CANX","type":"exact"},{"name":"cnx1","type":"related"}],"termid":"PR:P36581"}


id: PBO:0084955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-transmembrane subunit of the DSC ubiquitin ligase complex; similar in sequence to rhomboid pseudoproteases Der1p and UBAC2 that function in ERAD; ortholog of fission yeast dsc2","termid":"PBO:0084955"}


id: PBO:0074269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 11","termid":"PBO:0074269"}


id: MONDO:0016206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic panuveitis","termid":"MONDO:0017258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic uveal effusion syndrome","secondary_identifiers":["MEDGEN:1669541","GARD:20442","icd11.foundation:1481963661","UMLS:C4755300","Orphanet:209956"],"termid":"MONDO:0016206","xrefs":{"Monarch":{"xref_id":"0016206"}}}


id: PBO:0065215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 1 pseudogene 1","termid":"PBO:0065215"}


id: SO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet in which the main chains of two consecutive residues are H-bonded to that of the third, and in which the dihedral angles are as follows: Residue(i): -140 degrees < phi(l) -20 degrees , -90 degrees < psi(l) < 40 degrees. Residue (i+1): -180 degrees < phi < -25 degrees or +120 degrees < phi < +180 degrees, +40 degrees < psi < +180 degrees or -180 degrees < psi < -120 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge","secondary_identifiers":["http://en.wikipedia.org/wiki/Beta_bulge","BS:00208"],"synonyms":[{"name":"beta bulge","type":"exact"}],"termid":"SO:0001107"}


id: PBO:0038547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 1","termid":"PBO:0038547"}


id: MONDO:0007891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial generalized lentiginosis is a rare, inherited, skin hyperpigmentation disorder characterized by widespread lentigines without associated noncutaneous abnormalities. Patients present multiple brown to dark brown, non-elevated macula of 0.2 to 1 cm in diameter, spread over the entire body, sometimes including palms or soles, but never oral mucosa.","definition_xrefs":["Orphanet:231040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial generalized lentiginosis","secondary_identifiers":["GARD:17158","MESH:C573023","OMIM:151001","SCTID:765195000","UMLS:C3492944","MEDGEN:486897"],"synonyms":[{"name":"familial lentigines profusa","type":"exact"},{"name":"familial multiple lentigines syndrome without systemic involvement","type":"exact"},{"name":"lentiginosis profusa","type":"related"},{"name":"lentiginosis, diffuse","type":"related"},{"name":"lentiginosis, generalised","type":"related"},{"name":"lentiginosis, generalized","type":"related"},{"name":"lentiginosis, inherited patterned","type":"related"}],"termid":"MONDO:0007891","xrefs":{"Monarch":{"xref_id":"0007891"}}}


id: PBO:0083219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene KCC4/YCL024W","termid":"PBO:0083219"}


id: PBO:0026710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_MCM_complex_binding","termid":"PBO:0026710"}


id: PBO:0027629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_in_cell","termid":"PBO:0027629"}


id: PBO:0038490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1","termid":"PBO:0038490"}


id: MONDO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract with no obvious cause occurring in persons over 50 years old.","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile cataract","secondary_identifiers":["DOID:9669","SCTID:39450006","UMLS:C0036646","MEDGEN:11372","ICD9:366.1","NCIT:C35012","ICD9:366.10"],"termid":"MONDO:0004847","xrefs":{"Monarch":{"xref_id":"0004847"}}}


id: MONDO:0030069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgE recurrent infection syndrome 5, autosomal recessive","secondary_identifiers":["OMIM:618944","UMLS:C5394550","MEDGEN:1716052"],"synonyms":[{"name":"HIES5","type":"exact"},{"name":"HYPER-IgE RECURRENT INFECTION SYNDROME 5, AUTOSOMAL RECESSIVE","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome 5, autosomal recessive","type":"exact"}],"termid":"MONDO:0030069","xrefs":{"Monarch":{"xref_id":"0030069"}}}


id: PBO:0113467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease; localizes to the peroxisome in a Pex5p-dependent manner in oleate","termid":"PBO:0113467"}


id: MONDO:0006763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful inflammatory process leads to a mechanical block in active and passive range of motion (ROM) of the shoulder. Adhesive capsulitis of the shoulder is characterized by functional loss of passive and active shoulder motion. This inflammatory process results in fibroblastic proliferation and extensive scar tissue formation. Fibroblastic proliferation, a late phase of the inflammatory process involved in tissue repair, leads to thickening, fibrosis, and adhesion of the capsule to itself and the humerus.","definition_xrefs":["PMID:34772852"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frozen shoulder","secondary_identifiers":["SCTID:399114005","ICD9:726.0","MEDGEN:90227","ICD10CM:M75.0","MESH:D002062","EFO:1000941","DOID:14188","UMLS:C0311223","MedDRA:10017391"],"synonyms":[{"name":"adhesions-capsulitis,shoulder","type":"exact"},{"name":"adhesive capsulitis","type":"exact"},{"name":"adhesive capsulitis of shoulder","type":"exact"}],"termid":"MONDO:0006763","xrefs":{"Monarch":{"xref_id":"0006763"}}}


id: MONDO:1011525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, sheep","secondary_identifiers":["OMIA:000437-9940"],"termid":"MONDO:1011525","xrefs":{"Monarch":{"xref_id":"1011525"}}}


id: GO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"in utero embryonic development","termid":"GO:0001701"}


id: PBO:0001372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 (predicted)","termid":"PBO:0001372"}


id: PBO:0071949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 Y-linked 2","termid":"PBO:0071949"}


id: PBO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 5-51","termid":"PBO:0051215"}


id: PBO:0046218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 11","termid":"PBO:0046218"}


id: MONDO:1012443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanoma, non-human animal","termid":"MONDO:1011821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma, lion","secondary_identifiers":["OMIA:001724-9689"],"termid":"MONDO:1012443","xrefs":{"Monarch":{"xref_id":"1012443"}}}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: GO:0043289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of apocarotenoids by the oxidative cleavage of carotenoids. Many apocarotenoids are biologically important e.g. retinal and abscisic acid.","definition_xrefs":["GOC:jl","PMID:27485225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"apocarotenoid metabolic process","termid":"GO:0043288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"apocarotenoid biosynthetic process","synonyms":[{"name":"apo carotenoid biosynthetic process","type":"exact"},{"name":"apocarotenoid anabolism","type":"exact"},{"name":"apocarotenoid biosynthesis","type":"exact"},{"name":"apocarotenoid formation","type":"exact"},{"name":"apocarotenoid synthesis","type":"exact"}],"termid":"GO:0043289"}


id: GO:0017060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-(1,3)-N-acetyl-D-glucosaminyl-R = GDP + beta-D-galactosyl-(1,3)-[alpha-L-fucosyl-(1,4)]-N-acetyl-D-glucosaminyl-R.","definition_xrefs":["EC:2.4.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5693925","MetaCyc:2.4.1.65-RXN","Reactome:R-HSA-9603986","RHEA:23628"],"synonyms":[{"name":"(Le(a))-dependent (alpha-3/4)-fucosyltransferase activity","type":"broad"},{"name":"(Lea)-dependent (alpha-3/4)-fucosyltransferase activity","type":"broad"},{"name":"3-alpha-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"FucT-II activity","type":"broad"},{"name":"GDP-L-fucose:3-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 4I-alpha-L-fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:3-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 4I-alpha-L-fucosyltransferase activity","type":"related"},{"name":"Lewis FT activity","type":"broad"},{"name":"Lewis alpha-(1,3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis alpha-(1->3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis blood group alpha-(1,3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis blood group alpha-(1->3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis(Le) blood group gene-dependent alpha-(1,3/4)-L-fucosyltransferase activity","type":"broad"},{"name":"Lewis(Le) blood group gene-dependent alpha-(1->3/4)-L-fucosyltransferase activity","type":"narrow"},{"name":"alpha(1,4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-(1,3/1,4) fucosyltransferase III activity","type":"broad"},{"name":"alpha-(1,4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-(1->4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-4-L-fucosyltransferase activity","type":"broad"},{"name":"beta-acetylglucosaminylsaccharide fucosyltransferase activity","type":"broad"},{"name":"blood group Lewis alpha-4-fucosyltransferase activity","type":"broad"},{"name":"blood-group substance Le(a)-dependent fucosyltransferase activity","type":"broad"},{"name":"blood-group substance Lea-dependent fucosyltransferase","type":"broad"},{"name":"fuca(1,3)-glycosidic linkage formation","type":"related"},{"name":"galactoside 3(4)-L-fucosyltransferase activity","type":"broad"},{"name":"guanosine diphosphofucose-beta-acetylglucosaminylsaccharide 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 4-alpha-fucosyltransferase activity","type":"related"}],"termid":"GO:0017060"}


id: PBO:0091139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein","termid":"PBO:0091139"}


id: PBO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B1","termid":"PBO:0046426"}


id: PBO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 2","termid":"PBO:0071704"}


id: PBO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTB pseudogene 1","termid":"PBO:0044072"}


id: PBO:0050793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR3E antisense RNA 1","termid":"PBO:0050793"}


id: PBO:0116268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNP structure for efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may suppress transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs; binds G-quadruplex (G4) nucleic acids","termid":"PBO:0116268"}


id: MONDO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of rheumatic pericarditis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic pericarditis","termid":"MONDO:0024655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic rheumatic pericarditis","secondary_identifiers":["icd11.foundation:1473004877","MEDGEN:510021","ICD10CM:I09.2","ICD9:393","UMLS:C0155561","SCTID:78069008","DOID:1869"],"synonyms":[{"name":"rheumatic pericarditis, chronic","type":"exact"}],"termid":"MONDO:0002133","xrefs":{"Monarch":{"xref_id":"0002133"}}}


id: MONDO:0008604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumb with double phalanges","secondary_identifiers":["OMIM:190500","MESH:C566028","UMLS:C1860807","MEDGEN:395985"],"synonyms":[{"name":"triphalangeal thumb with double phalanges","type":"exact"}],"termid":"MONDO:0008604","xrefs":{"Monarch":{"xref_id":"0008604"}}}


id: GO:0051920
data:
  {"annotated_genes":["SJAG_01199","SJAG_03166","SJAG_00141","SJAG_02515","SJAG_02630","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63761],"is_not":false,"summary":null,"term":"GO:0051920"},{"annotations":[109218,76186,70705,79783,95562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-dithol + ROOH = [protein]-disulfide + H2O + ROH.","definition_xrefs":["RHEA:10008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"peroxiredoxin activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1222431","Reactome:R-HSA-1500804","Reactome:R-HSA-1222755"],"synonyms":[{"name":"PRDX activity","type":"exact"},{"name":"Prx activity","type":"exact"}],"termid":"GO:0051920","terms_by_termid":{"GO:0008379":null,"GO:0051920":null}}


id: PBO:0005717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome non-ATPase regulatory subunit (predicted)","termid":"PBO:0005717"}


id: PBO:0034219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mesoparasite_of","termid":"PBO:0034219"}


id: PBO:0062718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily P member 1 pseudogene","termid":"PBO:0062718"}


id: PBO:0039056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 5","termid":"PBO:0039056"}


id: PBO:0039367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 3","termid":"PBO:0039367"}


id: GO:0075150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075150)","synonyms":[{"name":"regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075150"}


id: MONDO:0015887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare diabetes mellitus type 2 (obsolete MONDO:0015887)","secondary_identifiers":["Orphanet:181376"],"synonyms":[{"name":"rare insulin-independent diabetes mellitus","type":"exact"}],"termid":"MONDO:0015887","xrefs":{"Monarch":{"xref_id":"0015887"}}}


id: PBO:0066874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 174","termid":"PBO:0066874"}


id: PBO:0116631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 4","termid":"PBO:0116631"}


id: MONDO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 7","secondary_identifiers":["OMIM:604827","MEDGEN:442800","UMLS:C2751729","DOID:0111321"],"synonyms":[{"name":"EIG7","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 7","type":"exact"},{"name":"epilepsy, juvenile myoclonic","type":"exact"},{"name":"myoclonic epilepsy, juvenile, 2","type":"related"}],"termid":"MONDO:0011491","xrefs":{"Monarch":{"xref_id":"0011491"}}}


id: PBO:0069285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 541, pseudogene","termid":"PBO:0069285"}


id: PBO:0028701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis","termid":"PBO:0028701"}


id: MOD:01149
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a sumo (Small Ubiquitin-related MOdifier) protein.","definition_xrefs":["PubMed:12612601","PubMed:18688235"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"sumoylated lysine","termid":"MOD:01149"}


id: PBO:0085496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome-binding protein; interacts physically with multiple subunits of the 20S proteasome and genetically with genes encoding 20S core particle and 19S regulatory particle subunits; exhibits boundary activity which blocks the propagation of heterochromatic silencing; contains a PI31 proteasome regulator domain and sequence similarity with human PSMF1, a proteasome inhibitor; not an essential gene","termid":"PBO:0085496"}


id: PBO:0003698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRD ubiquitin ligase complex subunit (predicted)","termid":"PBO:0003698"}


id: MONDO:0005988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by worms found in domestic animals. In humans nematode larvae enter the portal system from the small intestine and disseminate in visceral organs causing inflammatory reactions. Signs and symptoms include eosinophilia, hepatomegaly, splenomegaly, and lung infections.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxocariasis","secondary_identifiers":["DOID:9790","SCTID:406619001","ICD9:128.0","MESH:D014120","Orphanet:3343","UMLS:C0040553","icd11.foundation:1794729263","EFO:0007516","NCIT:C34758","GARD:18793","MedDRA:10044269","MEDGEN:21596","NCIT:C85194"],"synonyms":[{"name":"Toxocara caused disease or disorder","type":"exact"},{"name":"Toxocara disease or disorder","type":"exact"},{"name":"Toxocara infection","type":"exact"},{"name":"Toxocara infectious disease","type":"exact"},{"name":"infection by Toxascaris","type":"exact"},{"name":"visceral larva migrans","type":"exact"}],"termid":"MONDO:0005988","xrefs":{"Monarch":{"xref_id":"0005988"}}}


id: PBO:0055823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 1","termid":"PBO:0055823"}


id: FYPO:0006325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, may contain a septum, and contains multiple nuclei (usually four or more) per compartment.","definition_xrefs":["PomBase:mah","PMID:18272786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0000005"],"is_obsolete":false,"name":"elongated multinucleate vegetative cell with multinucleate compartment","synonyms":[{"name":"elongated multinucleate vegetative cell with multinucleate compartment during mitotic cell cycle","type":"related"},{"name":"elongated multinucleate vegetative cell with multinucleate compartment during vegetative growth","type":"exact"},{"name":"elongated multinucleate vegetative cell with tetranucleate compartment","type":"narrow"}],"termid":"FYPO:0006325"}


id: GO:0003937
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70336],"is_not":false,"summary":null,"term":"GO:0003937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.","definition_xrefs":["EC:3.5.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"IMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:IMPCYCLOHYDROLASE-RXN","Reactome:R-HSA-73797","RHEA:18445"],"synonyms":[{"name":"IMP 1,2-hydrolase (decyclizing)","type":"related"},{"name":"IMP synthetase activity","type":"related"},{"name":"inosinate cyclohydrolase activity","type":"related"},{"name":"inosinicase activity","type":"related"}],"termid":"GO:0003937","terms_by_termid":{"GO:0003937":null}}


id: PBO:0074785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 6","termid":"PBO:0074785"}


id: PATO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's having color.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colored","secondary_identifiers":["PATO:0000332"],"synonyms":[{"name":"pigmented","type":"related"}],"termid":"PATO:0000336"}


id: GO:1905513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GO_REF:0000058","PMID:15470145","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of short-term synaptic potentiation","termid":"GO:1905512"},{"relation_name":"negatively_regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of short-term synaptic potentiation","synonyms":[{"name":"down regulation of short-term synaptic potentiation","type":"exact"},{"name":"down regulation of synaptic facilitation","type":"exact"},{"name":"down-regulation of short-term synaptic potentiation","type":"exact"},{"name":"down-regulation of synaptic facilitation","type":"exact"},{"name":"downregulation of short-term synaptic potentiation","type":"exact"},{"name":"downregulation of synaptic facilitation","type":"exact"},{"name":"inhibition of short-term synaptic potentiation","type":"narrow"},{"name":"inhibition of synaptic facilitation","type":"narrow"},{"name":"negative regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905513"}


id: GO:0008299
data:
  {"annotated_genes":["SJAG_01474","SJAG_03360","SJAG_01865","SJAG_04568","SJAG_04499","SJAG_03349","SJAG_04954","SJAG_04865","SJAG_06603","SJAG_03352","SJAG_00580","SJAG_00554","SJAG_02719","SJAG_00624","SJAG_02163","SJAG_03715","SJAG_00413","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79037,98740],"is_not":false,"summary":null,"term":"GO:0008299"},{"annotations":[74842,72342,100372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[80310,102242,94805,106902,74710,114135,99957,109862,89051,115294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[99958,109863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[75075],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009240"},{"annotations":[74706,115295,77489,80516],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019287"},{"annotations":[111697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902767"},{"annotations":[66929,62017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00554":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_01474":null,"SJAG_01865":null,"SJAG_02163":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03360":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null,"SJAG_04954":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprenoid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYISOPRENSYN-PWY","GO:0009241"],"synonyms":[{"name":"isoprenoid anabolism","type":"exact"},{"name":"isoprenoid biosynthesis","type":"exact"},{"name":"isoprenoid formation","type":"exact"},{"name":"isoprenoid synthesis","type":"exact"},{"name":"polyisoprenoid anabolism","type":"narrow"},{"name":"polyisoprenoid biosynthesis","type":"narrow"},{"name":"polyisoprenoid biosynthetic process","type":"narrow"},{"name":"polyisoprenoid formation","type":"narrow"},{"name":"polyisoprenoid synthesis","type":"narrow"},{"name":"polyterpene biosynthesis","type":"narrow"},{"name":"polyterpene biosynthetic process","type":"narrow"}],"termid":"GO:0008299","terms_by_termid":{"GO:0008299":null,"GO:0009240":null,"GO:0010142":null,"GO:0016104":null,"GO:0019287":null,"GO:0019408":null,"GO:0033386":null,"GO:1902767":null}}


id: PBO:0042050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 107","termid":"PBO:0042050"}


id: MONDO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1, uniparental disomy 1q12 q21","secondary_identifiers":["MESH:C538085","UMLS:C2931726","GARD:1878","MEDGEN:419882"],"synonyms":[{"name":"Mosaic trisomy 1q12 q21","type":"related"},{"name":"uniparental disomy 1q12 q21","type":"related"}],"termid":"MONDO:0043085","xrefs":{"Monarch":{"xref_id":"0043085"}}}


id: SO:1001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different start codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_overlapping_peptides_different_start","synonyms":[{"name":"encodes overlapping peptides different start","type":"exact"}],"termid":"SO:1001191"}


id: MONDO:0019044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tumor of hematopoietic and lymphoid tissues (obsolete MONDO:0019044)","secondary_identifiers":["Orphanet:68347"],"termid":"MONDO:0019044","xrefs":{"Monarch":{"xref_id":"0019044"}}}


id: MONDO:1011558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic syndrome that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic syndrome, non-human animal","termid":"MONDO:1011404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic syndrome, pig","secondary_identifiers":["OMIA:001898-9823"],"termid":"MONDO:1011558","xrefs":{"Monarch":{"xref_id":"1011558"}}}


id: PBO:0043333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmin","termid":"PBO:0043333"}


id: PBO:0075479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 7","termid":"PBO:0075479"}


id: GO:1905428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ formation","termid":"GO:1905428"}


id: PBO:0066124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASSF3 divergent transcript","termid":"PBO:0066124"}


id: FYPO:0002757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of quinidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to quinidine","synonyms":[{"name":"resistance to quinidine during mitotic cell cycle","type":"related"},{"name":"resistance to quinidine during vegetative growth","type":"exact"},{"name":"resistant to quinidine","type":"exact"}],"termid":"FYPO:0002757"}


id: PBO:0082511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis","termid":"PBO:0082511"}


id: PBO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism (predicted)","termid":"PBO:0017565"}


id: GO:0018883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid used in manufacture of synthetic fibers of the polyamide type. It can cause local irritation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"caprolactam metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cap"],"synonyms":[{"name":"caprolactam metabolism","type":"exact"}],"termid":"GO:0018883"}


id: PBO:0069917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1209, pseudogene","termid":"PBO:0069917"}


id: MONDO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with variable intellectual impairment and behavioral abnormalities","secondary_identifiers":["GARD:18517","UMLS:C5193092","MEDGEN:1676192","OMIM:618430"],"synonyms":[{"name":"DDVIBA","type":"related"},{"name":"DEVELOPMENTAL DELAY WITH VARIABLE INTELLECTUAL IMPAIRMENT AND BEHAVIORAL ABNORMALITIES","type":"related"},{"name":"developmental delay with variable intellectual impairment and behavioral abnormalities","type":"exact"}],"termid":"MONDO:0032745","xrefs":{"Monarch":{"xref_id":"0032745"}}}


id: PBO:0027916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_export_from_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0027916"}


id: PBO:0039082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior gradient 3, protein disulphide isomerase family member","termid":"PBO:0039082"}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: MONDO:0000602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the blood.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of blood","secondary_identifiers":["DOID:0060050"],"synonyms":[{"name":"blood autoimmune disease","type":"exact"},{"name":"blood hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000602","xrefs":{"Monarch":{"xref_id":"0000602"}}}


id: PBO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NQO1 divergent transcript","termid":"PBO:0061424"}


id: GO:0019806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R-H + 2 bromide + H2O2 = 2 R-Br + 2 H2O. Enzymes with this activity often accept other halide ions as substrates, including chloride and iodide.","definition_xrefs":["EC:1.11.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"bromide peroxidase activity","synonyms":[{"name":"bromoperoxidase activity","type":"exact"}],"termid":"GO:0019806"}


id: GO:0003333
data:
  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id: MONDO:0006662
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the membranes surrounding the brain and spinal cord without a bacterial pathogen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral meningitis","termid":"MONDO:0007015"},{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aseptic meningitis","secondary_identifiers":["MESH:D008582","MedDRA:10003458","icd11.foundation:453360366","DOID:12157","EFO:1000823","UMLS:C0025290","SCTID:301770000","MEDGEN:7534","NCIT:C118299"],"synonyms":[{"name":"acute aseptic meningitis","type":"exact"},{"name":"aseptic meningitis","type":"exact"}],"termid":"MONDO:0006662","xrefs":{"Monarch":{"xref_id":"0006662"}}}


id: PBO:0043119
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic iron-sulfur assembly component 3","termid":"PBO:0043119"}


id: GO:0032835
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the vertebrate kidney. The glomerulus is part of the nephron and is restricted to one body segment.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus development","synonyms":[{"name":"glomerular development","type":"exact"}],"termid":"GO:0032835"}


id: PBO:0059840
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR2 pseudogene 2","termid":"PBO:0059840"}


id: MONDO:0000135
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kenny-Caffey syndrome (obsolete MONDO:0000135)","termid":"MONDO:0000135","xrefs":{"Monarch":{"xref_id":"0000135"}}}


id: MONDO:0001532
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Capillaria.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Enoplea infectious disease","termid":"MONDO:0005745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillariasis","secondary_identifiers":["SCTID:52979002","DOID:12474","UMLS:C0006897","icd11.foundation:839653996","ICD9:127.5","MEDGEN:507518"],"synonyms":[{"name":"Capillaria infection","type":"exact"},{"name":"infections, Capillaria","type":"related"}],"termid":"MONDO:0001532","xrefs":{"Monarch":{"xref_id":"0001532"}}}


id: MONDO:0008000
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 1","secondary_identifiers":["MEDGEN:854348","ICD9:346.80","OMIM:157300","SCTID:37796009","ICD9:346.90","UMLS:C3887485"],"synonyms":[{"name":"Mgau","type":"related"},{"name":"Mgr1","type":"related"},{"name":"migraine","type":"related"},{"name":"migraine with or without aura, susceptibility to, 1","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 1","type":"exact"},{"name":"migraine without aura, susceptibility to","type":"exact"},{"name":"migraine, resistance to","type":"exact"},{"name":"migraine, susceptibility to","type":"exact"}],"termid":"MONDO:0008000","xrefs":{"Monarch":{"xref_id":"0008000"}}}


id: PBO:0054055
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1397","termid":"PBO:0054055"}


id: GO:0071443
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  {"annotated_genes":["SJAG_00585"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107303],"is_not":false,"summary":null,"term":"GO:0071443"}]},"cv_name":"molecular_function","definition":"Binding to DNA sequences encoding transfer RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"tDNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071443","terms_by_termid":{"GO:0071443":null}}


id: MONDO:0859229
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar dysfunction, impaired intellectual development, and hypogonadotropic hypogonadism","secondary_identifiers":["MEDGEN:1808634","UMLS:C5676924","OMIM:619761"],"termid":"MONDO:0859229","xrefs":{"Monarch":{"xref_id":"0859229"}}}


id: MONDO:0957955
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"},{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"immunodeficiency 114, folate-responsive","secondary_identifiers":["UMLS:C5882719","MEDGEN:1848890","OMIM:620603"],"termid":"MONDO:0957955","xrefs":{"Monarch":{"xref_id":"0957955"}}}


id: PBO:0000307
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp7 (predicted)","termid":"PBO:0000307"}


id: GO:1903638
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein insertion into mitochondrial outer membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16374546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"regulation of protein insertion into mitochondrial outer membrane","termid":"GO:1903636"},{"relation_name":"is_a","term_name":"positive regulation of protein targeting to mitochondrion","termid":"GO:1903955"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein insertion into mitochondrial outer membrane","termid":"GO:0045040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0006605","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein insertion into mitochondrial outer membrane","synonyms":[{"name":"activation of mitochondrial outer membrane protein import","type":"narrow"},{"name":"activation of protein import into mitochondrial outer membrane","type":"narrow"},{"name":"activation of protein insertion into mitochondrial outer membrane","type":"narrow"},{"name":"activation of protein transport into mitochondrial outer membrane","type":"narrow"},{"name":"positive regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"positive regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"positive regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"up regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"up regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"up regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"up regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"up-regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"up-regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"up-regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"up-regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"upregulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"upregulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"upregulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"upregulation of protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:1903638"}


id: PBO:0072593
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisin 1","termid":"PBO:0072593"}


id: GO:0002306
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002306"}


id: PBO:0068458
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 34, pseudogene","termid":"PBO:0068458"}


id: PBO:0067686
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 3","termid":"PBO:0067686"}


id: PBO:0006679
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in SREBP Cleavage","termid":"PBO:0006679"}


id: PBO:0045384
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase like 6","termid":"PBO:0045384"}


id: GO:0031701
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an angiotensin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"angiotensin receptor binding","synonyms":[{"name":"angiotensin receptor ligand","type":"narrow"}],"termid":"GO:0031701"}


id: GO:0015605
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id: GO:0018527
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id: PBO:0004526
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 1 adaptor protein Pop1","termid":"PBO:0004526"}


id: GO:0008652
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id: GO:0140027
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the contractile vacuole to a specific location.","definition_xrefs":["PMID:19687255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole localization","synonyms":[{"name":"establishment of contractile vacuole localization","type":"narrow"}],"termid":"GO:0140027"}


id: PBO:0055358
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2787","termid":"PBO:0055358"}


id: PBO:0062552
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily Q member 2","termid":"PBO:0062552"}


id: PATO:0002216
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomer.","definition_xrefs":["neurolex:http://neurolex.org/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinated","synonyms":[{"name":"Ubiquitylation","type":"related"}],"termid":"PATO:0002216"}


id: PBO:0076801
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 2","termid":"PBO:0076801"}


id: GO:0070842
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an aggresome; requires the microtubule cytoskeleton and dynein.","definition_xrefs":["GOC:rl","PMID:14675537","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"aggresome assembly","termid":"GO:0070842"}


id: GO:0102915
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-pinoresinol + NADPH + O2 = (+)-piperitol + NADP + 2 H2O.","definition_xrefs":["PMID:16785429","EC:1.14.19.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"piperitol synthase activity","termid":"GO:0102915"}


id: GO:0035688
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a T-helper 1 cell between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation. A T-helper 1 cell is a CD4-positive, alpha-beta T cell that has the phenotype T-bet-positive and produces interferon-gamma.","definition_xrefs":["GOC:BHF","PMID:10477596","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helper T cell diapedesis","termid":"GO:0035685"},{"relation_name":"part_of","term_name":"T-helper 1 cell extravasation","termid":"GO:0035687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell diapedesis","synonyms":[{"name":"Th1 cell diapedesis","type":"exact"}],"termid":"GO:0035688"}


id: FYPO:0005985
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id: GO:1904493
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tetrahydrofolyl-poly(glutamate) polymer.","definition_xrefs":["GO_REF:0000067","GOC:BHF","PMID:24863754","GOC:hal","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tetrahydrofolyl-poly(glutamate) polymer binding","termid":"GO:1904493"}


id: PBO:0048754
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate kinase","termid":"PBO:0048754"}


id: PBO:0000640
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr3","termid":"PBO:0000640"}


id: GO:0038076
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in innate immune response (obsolete GO:0038076)","synonyms":[{"name":"MAP2K activity involved in innate immune response","type":"exact"},{"name":"MAPKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038076"}


id: PBO:0053169
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEF1 antisense RNA 1","termid":"PBO:0053169"}


id: PBO:0048881
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member G, pseudogene","termid":"PBO:0048881"}


id: PBO:0089172
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein repair carboxyl methyl esterase","termid":"PBO:0089172"}


id: GO:0034943
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienoic acid + ATP + CoASH = trans-2-methyl-5-isopropylhexa-2,5-dienoyl-CoA + AMP + PPi.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-2-methyl-5-isopropylhexa-2,5-dienoate-CoA ligase activity (obsolete GO:0034943)","termid":"GO:0034943"}


id: GO:0098853
data:
  {"annotated_genes":["SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115593],"is_not":false,"summary":null,"term":"GO:0098853"}]},"cv_name":"cellular_component","definition":"A zone of apposition between endoplasmic-reticulum and lytic vacuole membranes, structured by bridging complexes.","definition_xrefs":["PMID:26283797","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-vacuole membrane contact site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-vacuole membrane contact site","type":"exact"}],"termid":"GO:0098853","terms_by_termid":{"GO:0098853":null}}


id: GO:0102256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: neoagarohexaose + H2O = 3,6-anhydro-alpha-L-galactopyranose + agaropentaose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete neoagarohexaose 1,3-alpha-3,6-anhydro-L-galactosidase activity (obsolete GO:0102256)","termid":"GO:0102256"}


id: PATO:0001584
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant","termid":"PATO:0001227"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability","synonyms":[{"name":"high variability","type":"exact"}],"termid":"PATO:0001584"}


id: MONDO:0020765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuropathy, congenital hypomelinating","termid":"MONDO:0033352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"neuropathy, congenital hypomyelinating, 2","secondary_identifiers":["MEDGEN:1648446","UMLS:C4722277","OMIM:618184"],"synonyms":[{"name":"CHN2","type":"exact"},{"name":"NEUROPATHY, CONGENITAL HYPOMYELINATING, 2","type":"exact"},{"name":"hypomyelinating neuropathy, congenital, 2","type":"exact"}],"termid":"MONDO:0020765","xrefs":{"Monarch":{"xref_id":"0020765"}}}


id: PBO:0054101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1460","termid":"PBO:0054101"}


id: PBO:0078124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-6","termid":"PBO:0078124"}


id: PBO:0036142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron","termid":"PBO:0036142"}


id: MONDO:0056817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual rectal carcinoma characterized by the presence of glandular and squamous carcinomatous components. The two carcinomatous components may be admixed within the tumor, or the two may appear separately in different areas.","definition_xrefs":["NCIT:C43594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenosquamous carcinoma","termid":"MONDO:0006157"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of rectum","termid":"MONDO:0018515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectal adenosquamous carcinoma","secondary_identifiers":["MEDGEN:313658","UMLS:C1709865"],"synonyms":[{"name":"rectal adenosquamous cancer","type":"exact"},{"name":"rectal adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0056817","xrefs":{"Monarch":{"xref_id":"0056817"}}}


id: GO:0019614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound catabolic process","synonyms":[{"name":"catechol breakdown","type":"related"},{"name":"catechol catabolic process","type":"related"},{"name":"catechol catabolism","type":"related"},{"name":"catechol degradation","type":"related"}],"termid":"GO:0019614"}


id: PBO:0058714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6842","termid":"PBO:0058714"}


id: MONDO:0022308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurodegenerative condition affecting the cerebral cortex and basal ganglia. The disorder is characterized by varying degrees of cognitive and motor impairment.","definition_xrefs":["NCIT:C129069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebral degeneration","termid":"MONDO:0024238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"corticobasal degeneration disorder","secondary_identifiers":["SCTID:18842008","UMLS:C0393570","MEDGEN:95979","NANDO:1200011"],"synonyms":[{"name":"CBGD","type":"related"},{"name":"cortical basal ganglionic degeneration","type":"exact"},{"name":"cortical-basal ganglionic degeneration","type":"related"},{"name":"cortico-basal ganglionic Degeneration (CBGD)","type":"related"},{"name":"corticobasal degeneration","type":"exact"},{"name":"corticobasal syndrome","type":"related"},{"name":"corticodentatonigral degeneration with neuronal achromasia","type":"related"}],"termid":"MONDO:0022308","xrefs":{"Monarch":{"xref_id":"0022308"}}}


id: MONDO:1011869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysmyelination, non-human animal","secondary_identifiers":["OMIA:001247"],"termid":"MONDO:1011869","xrefs":{"Monarch":{"xref_id":"1011869"}}}


id: PBO:0011100
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription induced by copper limitation","termid":"PBO:0011100"}


id: PBO:0055891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 10","termid":"PBO:0055891"}


id: GO:0120043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The shaft comprises the majority of the length of the stereocilium. This region is notable for the extreme stability of actin filaments, which are highly crosslinked into a parallel bundle.","definition_xrefs":["GOC:krc","PMID:20170899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium shaft","termid":"GO:0120043"}


id: GO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"},{"relation_name":"part_of","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell development","termid":"GO:0002068"}


id: MONDO:0100433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome associated with developmental delay, mild intellectual disability, microcephaly, and thrombocytopenia with platelet anisotropy and enlarged platelets.","definition_xrefs":["PMID:30315159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"ACTB-associated syndromic thrombocytopenia","secondary_identifiers":["OMIM:620475","UMLS:C5882677","MEDGEN:1851006"],"synonyms":[{"name":"ACTB-AST","type":"exact"},{"name":"thrombocytopenia 8, with dysmorphic features and developmental delay","type":"exact"}],"termid":"MONDO:0100433","xrefs":{"Monarch":{"xref_id":"0100433"}}}


id: PBO:0055260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2687","termid":"PBO:0055260"}


id: PBO:0076444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 15","termid":"PBO:0076444"}


id: FYPO:0005129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during heat shock measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PMID:17927811","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of heat shock gene mRNA during vegetative growth","synonyms":[{"name":"increased heat shock gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cellular response to heat shock gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of heat shock gene RNA during vegetative growth","type":"exact"},{"name":"increased level of heat shock gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of heat shock gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005129"}


id: PBO:0064724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 60","termid":"PBO:0064724"}


id: FYPO:0001660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered cellular cAMP level","termid":"FYPO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular cAMP level","synonyms":[{"name":"decreased cellular cAMP accumulation","type":"related"},{"name":"decreased cellular cyclic AMP level","type":"exact"},{"name":"reduced cellular cAMP level","type":"exact"}],"termid":"FYPO:0001660"}


id: PBO:0072962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin III","termid":"PBO:0072962"}


id: MOD:00230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, two L-histidine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["PubMed:2765515","PubMed:9651245","RESID:AA0225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); via pros nitrogen","type":"exact"},{"name":"Rieske iron-sulfur cofactor","type":"exact"},{"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(bis-N3'-histidinoiron)","type":"exact"}],"termid":"MOD:00230"}


id: MONDO:0019361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete boutonneuse fever (obsolete MONDO:0019361)","termid":"MONDO:0019361","xrefs":{"Monarch":{"xref_id":"0019361"}}}


id: GO:1901390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta activation (obsolete GO:1901390)","synonyms":[{"name":"activation of L-TGF-beta activation","type":"exact"},{"name":"activation of TGF-B activation","type":"exact"},{"name":"activation of TGF-beta activation","type":"exact"},{"name":"activation of TGFB activation","type":"exact"},{"name":"activation of TGFbeta activation","type":"exact"},{"name":"activation of latent TGF-beta activation","type":"exact"},{"name":"activation of transforming growth factor beta activation","type":"narrow"},{"name":"positive regulation of L-TGF-beta activation","type":"exact"},{"name":"positive regulation of TGF-B activation","type":"exact"},{"name":"positive regulation of TGF-beta activation","type":"exact"},{"name":"positive regulation of TGFB activation","type":"exact"},{"name":"positive regulation of TGFbeta activation","type":"exact"},{"name":"positive regulation of latent TGF-beta activation","type":"exact"},{"name":"up regulation of L-TGF-beta activation","type":"exact"},{"name":"up regulation of TGF-B activation","type":"exact"},{"name":"up regulation of TGF-beta activation","type":"exact"},{"name":"up regulation of TGFB activation","type":"exact"},{"name":"up regulation of TGFbeta activation","type":"exact"},{"name":"up regulation of latent TGF-beta activation","type":"exact"},{"name":"up regulation of transforming growth factor beta activation","type":"exact"},{"name":"up-regulation of L-TGF-beta activation","type":"exact"},{"name":"up-regulation of TGF-B activation","type":"exact"},{"name":"up-regulation of TGF-beta activation","type":"exact"},{"name":"up-regulation of TGFB activation","type":"exact"},{"name":"up-regulation of TGFbeta activation","type":"exact"},{"name":"up-regulation of latent TGF-beta activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta activation","type":"exact"},{"name":"upregulation of L-TGF-beta activation","type":"exact"},{"name":"upregulation of TGF-B activation","type":"exact"},{"name":"upregulation of TGF-beta activation","type":"exact"},{"name":"upregulation of TGFB activation","type":"exact"},{"name":"upregulation of TGFbeta activation","type":"exact"},{"name":"upregulation of latent TGF-beta activation","type":"exact"},{"name":"upregulation of transforming growth factor beta activation","type":"exact"}],"termid":"GO:1901390"}


id: PR:O60083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.09c","synonyms":[{"name":"Spom972h-tfb6","type":"exact"}],"termid":"PR:O60083"}


id: GO:1990489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, in the absence of oxygen.","definition_xrefs":["PMID:23079077","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"anaerobic pectin catabolic process","synonyms":[{"name":"anaerobic pectin degradation","type":"exact"}],"termid":"GO:1990489"}


id: PBO:0063506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase regulatory subunit 2, pseudogene","termid":"PBO:0063506"}


id: GO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta intraepithelial T cell differentiation","termid":"GO:0002299"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002300"}


id: PBO:0046094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 5","termid":"PBO:0046094"}


id: PBO:0003895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Iki1 (predicted)","termid":"PBO:0003895"}


id: GO:0032561
data:
  {"annotated_genes":["SJAG_00360","SJAG_00983","SJAG_02595","SJAG_03684","SJAG_02824","SJAG_03688","SJAG_00226","SJAG_00430","SJAG_01695","SJAG_01339","SJAG_00968","SJAG_03915","SJAG_02684","SJAG_03453","SJAG_00840","SJAG_04233","SJAG_01277","SJAG_03846","SJAG_02384","SJAG_05332","SJAG_02353","SJAG_04509","SJAG_03732","SJAG_01851","SJAG_02302","SJAG_01789","SJAG_04004","SJAG_02520","SJAG_04366","SJAG_04375","SJAG_02444","SJAG_00663","SJAG_03275","SJAG_02171","SJAG_02180","SJAG_03137","SJAG_04470","SJAG_01929","SJAG_01379","SJAG_02856","SJAG_01696","SJAG_03342","SJAG_00466","SJAG_03072","SJAG_04387","SJAG_01438","SJAG_04343","SJAG_02292","SJAG_02366","SJAG_00801","SJAG_00414","SJAG_01456","SJAG_00031","SJAG_00906","SJAG_02661","SJAG_02848","SJAG_01358","SJAG_01215","SJAG_02601","SJAG_04666","SJAG_04157","SJAG_02509","SJAG_00044","SJAG_02656","SJAG_03374","SJAG_04874","SJAG_02331","SJAG_03959","SJAG_02640","SJAG_04940","SJAG_02604","SJAG_01391","SJAG_04003","SJAG_00659","SJAG_04351","SJAG_03371","SJAG_00118","SJAG_02605","SJAG_02374","SJAG_01774","SJAG_02233","SJAG_01769","SJAG_01909","SJAG_01534","SJAG_00231","SJAG_00424","SJAG_01558","SJAG_03188","SJAG_05030","SJAG_00457","SJAG_03461","SJAG_04410","SJAG_01449","SJAG_00344","SJAG_04862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75552,92789,72702,92059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[89243,116080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[68217,76638,66279,66418,68860,62907,73747,66809,60228,75549,70632,78282,58924,58315,69882,104031,74439,60497,73115,62007,72632,63496,72914,69335,80442,58296,80665,96866,64503,76096,80601,78895,93762,96636,60696,65744,65014,73721,61205,63193,93815,101602,68468,118872,65525,67855,58030,69388,78293,63004,60200,61975,57535,59675,57134,71465,105435,69419,61474,58040,72699,71886,65013,74700,67713,108851,62367,63913,58846,63222,77867,61121,63861,92286,94593,64481,91440,58143,78091,65204,77700,70095,70295,117883,66248,59105,96121,73836,74762,119353,80551,67069,113922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl ribonucleotide, any compound consisting of guanosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl nucleotide binding","termid":"GO:0019001"},{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanyl ribonucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0032561","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: MONDO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of behaviors that can be loosely defined as the failure to resist an impulsive act or behavior that may be harmful to self or others.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impulse control disorder","secondary_identifiers":["MEDGEN:5769","SCTID:66347000","ICD9:312.39","ICD9:312.30","NCIT:C34723","UMLS:C0021122","DOID:10937"],"synonyms":[{"name":"ICD","type":"exact"},{"name":"impulse-control disorder","type":"exact"}],"termid":"MONDO:0001162","xrefs":{"Monarch":{"xref_id":"0001162"}}}


id: MONDO:0011537
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87189],"is_not":false,"summary":null,"term":"MONDO:0011537"}]},"cv_name":"mondo","definition":"An autosomal dominant disease characterized by macrocephaly, facial phenotypes including square outline with frontal bossing, 'dished-out' midface, biparietal narrowing, and long philtrum, developmental delay and autism that has material basis in heterozygous mutation in the PTEN gene on chromosome 10q23.","definition_xrefs":["PMID:15805158","PMID:1719811","DOID:0060867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"macrocephaly-autism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1854416","MEDGEN:381416","OMIM:605309","GARD:17112","MESH:C565342","Orphanet:210548"],"synonyms":[{"name":"macrocephaly-intellectual disability-autism syndrome","type":"exact"},{"name":"macrocephaly/autism syndrome","type":"related"}],"termid":"MONDO:0011537","terms_by_termid":{"MONDO:0011537":null},"xrefs":{"Monarch":{"xref_id":"0011537"}}}


id: GO:0022023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a radial glial cell in the forebrain.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"is_a","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"},{"relation_name":"part_of","term_name":"forebrain radial glial cell differentiation","termid":"GO:0021861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell fate commitment in forebrain","termid":"GO:0022023"}


id: GO:0060907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","termid":"GO:0061081"},{"relation_name":"positively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of macrophage cytokine production","termid":"GO:0060907"}


id: PBO:0065175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 1","termid":"PBO:0065175"}


id: PBO:0079633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 4, Y-linked","termid":"PBO:0079633"}


id: GO:0033512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate saccharopine.","definition_xrefs":["GOC:mah","MetaCyc:LYSINE-DEG1-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006520","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via saccharopine","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via saccharopine","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via saccharopine","type":"exact"}],"termid":"GO:0033512"}


id: GO:0048753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment granule organization","synonyms":[{"name":"pigment granule organisation","type":"exact"},{"name":"pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0048753"}


id: FYPO:0004287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is decreased. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["PomBase:mah","GO:0006303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-strand break repair during vegetative growth","termid":"FYPO:0003660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"decreased double-strand break repair via nonhomologous end joining","synonyms":[{"name":"decreased NHEJ","type":"exact"},{"name":"decreased double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"decreased double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"decreased nonhomologous end joining","type":"exact"},{"name":"reduced double-strand break repair via nonhomologous end joining","type":"exact"}],"termid":"FYPO:0004287"}


id: PBO:0041785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine like","termid":"PBO:0041785"}


id: MONDO:0015780
data:
  {"annotated_genes":["SJAG_01378","SJAG_04266","SJAG_01836","SJAG_04627","SJAG_04754","SJAG_00083","SJAG_05979","SJAG_00566"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007485"},{"annotations":[85836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013521"},{"annotations":[85470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"},{"annotations":[85672,85673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009136"},{"annotations":[85833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013519"},{"annotations":[85835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013520"},{"annotations":[85643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014600"},{"annotations":[86100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031057"},{"annotations":[86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010584"}]},"cv_name":"mondo","definition":"Dyskeratosis congenita (DC) is a rare ectodermal dysplasia that often presents with the classic triad of nail dysplasia, skin pigmentary changes, and oral leukoplakia associated with a high risk of bone marrow failure (BMF) and cancer.","definition_xrefs":["Orphanet:1775"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with combined immunodeficiency (obsolete MONDO:0018035)","termid":"MONDO:0018035"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with hamartosis (obsolete MONDO:0020063)","termid":"MONDO:0020063"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete excretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020195)","termid":"MONDO:0020195"},{"relation_name":"excluded_subClassOf","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01378":null,"SJAG_01836":null,"SJAG_04266":null,"SJAG_04627":null,"SJAG_04754":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2729","NANDO:1200304","SCTID:74911008","NANDO:1200342","MedDRA:10062759","MESH:D019871","NORD:1071","icd11.foundation:1531033936","GARD:10905","MEDGEN:78580","UMLS:C0265965","NANDO:2200715","NCIT:C111802","OMIMPS:127550"],"synonyms":[{"name":"DC","type":"exact"},{"name":"DKC","type":"exact"},{"name":"Hoyeraal-Hreidarsson syndrome","type":"related"},{"name":"Zinsser Cole Engman syndrome","type":"related"},{"name":"Zinsser-Engman-Cole syndrome","type":"exact"},{"name":"dyskeratosis congenita","type":"exact"}],"termid":"MONDO:0015780","terms_by_termid":{"MONDO:0007485":null,"MONDO:0009136":null,"MONDO:0010584":null,"MONDO:0013519":null,"MONDO:0013520":null,"MONDO:0013521":null,"MONDO:0014600":null,"MONDO:0014690":null,"MONDO:0031057":null},"xrefs":{"Monarch":{"xref_id":"0015780"}}}


id: PATO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's containing bone.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osseous","synonyms":[{"name":"bony","type":"exact"}],"termid":"PATO:0002126"}


id: PBO:0064859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R15B and PIK3C2B antisense RNA 1","termid":"PBO:0064859"}


id: PBO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 4","termid":"PBO:0061793"}


id: GO:1905483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of motor neuron migration.","definition_xrefs":["GOC:TermGenie","PMID:16516839","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"regulates","term_name":"motor neuron migration","termid":"GO:0097475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of motor neuron migration","termid":"GO:1905483"}


id: PBO:0074692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70B","termid":"PBO:0074692"}


id: MONDO:0049222
data:
  {"annotated_genes":["SJAG_05326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86286],"is_not":false,"summary":null,"term":"MONDO:0049222"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05326":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 107","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301013","UMLS:C4692652","MEDGEN:1639885","DOID:0112054","GARD:22698"],"synonyms":[{"name":"MRX107","type":"related"},{"name":"intellectual developmental disorder, X-linked 107","type":"exact"},{"name":"intellectual disability, X-linked 107","type":"exact"},{"name":"mental retardation, X-linked 107","type":"related"}],"termid":"MONDO:0049222","terms_by_termid":{"MONDO:0049222":null},"xrefs":{"Monarch":{"xref_id":"0049222"}}}


id: MONDO:0003239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Camurati-Engelmann disease (obsolete MONDO:0003239)","termid":"MONDO:0003239","xrefs":{"Monarch":{"xref_id":"0003239"}}}


id: PBO:0040228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4","termid":"PBO:0040228"}


id: GO:0097441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that emerges near the basal pole of a neuron. In bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon.","definition_xrefs":["PMID:22683681","GOC:bc","GOC:aruk","NIF_Subcellular:sao1079900774","PMID:17046728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal dendrite","synonyms":[{"name":"basilar dendrite","type":"exact"}],"termid":"GO:0097441"}


id: GO:0014834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which the number of skeletal muscle satellite cells in a skeletal muscle is maintained during muscle regeneration. There are at least three mechanisms by which this is achieved. Skeletal muscle satellite stem cell asymmetric division ensures satellite stem cell numbers are kept constant. Symmetric division of these cells amplifies the number of skeletal muscle satellite stem cells. Some adult skeletal muscle myoblasts (descendants of activated satellite cells) can develop back into quiescent satellite cells, replenishing the overall pool of satellite cells.","definition_xrefs":["GOC:ef","GOC:tb","PMID:23303905","GOC:dph","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell number","termid":"GO:0098727"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration","synonyms":[{"name":"satellite cell compartment self-renewal involved in skeletal muscle regeneration","type":"exact"},{"name":"satellite cell population maintenance","type":"exact"},{"name":"satellite cell self-renewal","type":"broad"}],"termid":"GO:0014834"}


id: PBO:0066777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 75","termid":"PBO:0066777"}


id: MONDO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm originating from the surface ovarian epithelium. It accounts for the greatest number of deaths from malignancies of the female genital tract and is the fifth leading cause of cancer fatalities in women. It is predominantly a disease of older white women of northern European extraction, but it is seen in all ages and ethnic groups. Adenocarcinomas constitute the vast majority of ovarian carcinomas. The pattern of metastatic spread in ovarian carcinoma is similar regardless of the microscopic type. The most common sites of involvement are the contralateral ovary, peritoneal cavity, para-aortic and pelvic lymph nodes, and liver. Lung and pleura are the most common sites of extra-abdominal spread. The primary form of therapy is surgical. The overall prognosis of ovarian carcinoma remains poor, a direct result of its rapid growth rate and the lack of early symptoms. --2002","definition_xrefs":["NCIT:C4908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinoma","secondary_identifiers":["DOID:4001","EFO:0001075","UMLS:C4721610","MEDGEN:1648335"],"synonyms":[{"name":"carcinoma of ovary","type":"exact"},{"name":"carcinoma of the ovary","type":"exact"},{"name":"epithelial ovarian cancer","type":"exact"},{"name":"ovarian cancer","type":"broad"},{"name":"ovarian carcinoma","type":"exact"},{"name":"ovarian epithelial cancer","type":"broad"},{"name":"ovary carcinoma","type":"exact"}],"termid":"MONDO:0005140","xrefs":{"Monarch":{"xref_id":"0005140"}}}


id: PBO:0054378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1774","termid":"PBO:0054378"}


id: GO:0032285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating glial cell membrane closes around an axon.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-myelinated axon ensheathment","synonyms":[{"name":"ensheathment of non-myelinated axons","type":"exact"}],"termid":"GO:0032285"}


id: PBO:0028239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_meiotic_anaphase_II","termid":"PBO:0028239"}


id: GO:0047608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylindoxyl + O2 = N-acetylisatin + unknown.","definition_xrefs":["MetaCyc:ACETYLINDOXYL-OXIDASE-RXN","EC:1.7.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetylindoxyl oxidase activity","secondary_identifiers":["RHEA:16941"],"synonyms":[{"name":"N-acetylindoxyl:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047608"}


id: MOD:00904
data:
  {"annotated_genes":["SJAG_00318","SJAG_02498","SJAG_01587","SJAG_02183","SJAG_00331","SJAG_02472"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80850,80808,80821,81085,80920,81120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-aspartic acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null,"SJAG_02472":null,"SJAG_02498":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-aspartic acid residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModAsp","type":"exact"}],"termid":"MOD:00904","terms_by_termid":{"MOD:00042":null}}


id: PBO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Shg1","termid":"PBO:0001512"}


id: PBO:0064542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 3, pseudogene","termid":"PBO:0064542"}


id: SO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_J_C_cluster","synonyms":[{"name":"D DJ J C cluster","type":"exact"},{"name":"D-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000506"}


id: PBO:0003999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin CycC, Srb mediator subunit Srb11","termid":"PBO:0003999"}


id: PBO:0064660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4C","termid":"PBO:0064660"}


id: PBO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"destrin, actin depolymerizing factor","termid":"PBO:0045508"}


id: PBO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 18","termid":"PBO:0045569"}


id: MONDO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"dermal unilateral segmental cavernous angioma","secondary_identifiers":["DOID:3148","MEDGEN:634347","UMLS:C0474966"],"synonyms":[{"name":"unilateral segmental cavernous hemangioma","type":"exact"},{"name":"unilateral segmental cavernous hemangioma of the skin","type":"exact"}],"termid":"MONDO:0002526","xrefs":{"Monarch":{"xref_id":"0002526"}}}


id: PBO:0064225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 2","termid":"PBO:0064225"}


id: GO:0160022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue by discharging a portion of the secreting cell when intracellular components are freed into a lumen through the shedding of whole pieces of the cytoplasm.","definition_xrefs":["PMID:25960390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"apocrine secretion","synonyms":[{"name":"secretion by cell decapitation","type":"related"},{"name":"secretion by membrane budding","type":"related"}],"termid":"GO:0160022"}


id: PBO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein epsilon 1","termid":"PBO:0048656"}


id: MONDO:0013987
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87393],"is_not":false,"summary":null,"term":"MONDO:0013987"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 15 is a rare mitochondrial disease due to a defect in mitochondrial protein synthesis characterized by onset in infancy or early childhood of muscular hypotonia, gait ataxia, mild bilateral pyramidal tract signs, developmental delay (affecting mostly speech and coordination) and subsequent intellectual disability. Short stature, obesity, microcephaly, strabismus, nystagmus, reduced visual acuity, lactic acidosis, and a brain neuropathology consistent with Leigh syndrome are also reported.","definition_xrefs":["Orphanet:319524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111491","OMIM:614947","MEDGEN:1646555","UMLS:C4706313","GARD:17456","SCTID:763203009"],"synonyms":[{"name":"COXPD15","type":"exact"},{"name":"MTFMT combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 15","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 15","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MTFMT","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 15","type":"exact"}],"termid":"MONDO:0013987","terms_by_termid":{"MONDO:0013987":null},"xrefs":{"Monarch":{"xref_id":"0013987"}}}


id: PBO:0005255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase (predicted)","termid":"PBO:0005255"}


id: GO:0070217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a transcription factor TFIIIB complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"transcription factor TFIIIB complex assembly","synonyms":[{"name":"TFIIIB assembly","type":"exact"}],"termid":"GO:0070217"}


id: PBO:0049055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 55","termid":"PBO:0049055"}


id: PATO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000155 relative threshold (obsolete PATO:0000155)","termid":"PATO:0000155"}


id: SO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif to which the S. pombe Zas1 protein binds. The consensus sequence is 5'-(Y)CCCCAY-3'.","definition_xrefs":["PomBase:vw","PMID:29735745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zas1_recognition_motif","synonyms":[{"name":"Zas1 recognition motif","type":"exact"}],"termid":"SO:0002215"}


id: PR:Q96WS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WS6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.03","synonyms":[{"name":"Spom972h-meu15","type":"exact"}],"termid":"PR:Q96WS6"}


id: PBO:0030102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_citrulline_level","termid":"PBO:0030102"}


id: PBO:0086227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that inhibits ATP hydrolysis by the F1F0-ATP synthase; inhibitory function is enhanced by stabilizing proteins Stf1p and Stf2p; has a calmodulin-binding motif and binds calmodulin in vitro; INH1 has a paralog, STF1, that arose from the whole genome duplication","termid":"PBO:0086227"}


id: PBO:0041172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruton tyrosine kinase","termid":"PBO:0041172"}


id: PBO:0043424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit alpha 2","termid":"PBO:0043424"}


id: MONDO:0005100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder, possibly autoimmune, marked by excessive production of collagen which results in hardening and thickening of body tissues. The two types of systemic scleroderma, limited cutaneous and diffuse cutaneous are classified with focus on the extent of affected skin. A relationship exists between the extent of skin area affected and degree of internal organ/system involvement. Systemic scleroderma can manifest itself in pulmonary fibrosis, Raynaud's syndrome, digestive system telangiectasias, renal hypertension and/or pulmonary hypertension.","definition_xrefs":["NCIT:C72070"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"systemic sclerosis","secondary_identifiers":["DOID:418","UMLS:C0036421","NANDO:1200277","GARD:9748","MESH:D012595","NANDO:2200429","ICD9:710.1","EFO:0000717","icd11.foundation:1084365812","MEDGEN:19897","MedDRA:10042953","Orphanet:90291","SCTID:89155008"],"synonyms":[{"name":"PSS (progressive systemic sclerosis)","type":"exact"},{"name":"SSc","type":"exact"},{"name":"SSc, diffuse sclerosis","type":"exact"},{"name":"Scleroderma","type":"broad"},{"name":"Scleroderma (& [systemic sclerosis])","type":"exact"},{"name":"Scleroderma syndrome","type":"exact"},{"name":"Scleroderma, diffuse","type":"exact"},{"name":"Scleroderma, systemic","type":"exact"},{"name":"Systemic Scleroderma","type":"exact"},{"name":"diffuse Scleroderma","type":"exact"},{"name":"diffuse sclerosis","type":"exact"},{"name":"progressive systemic sclerosis","type":"exact"},{"name":"systemic Scleroderma","type":"exact"},{"name":"systemic scleroderma","type":"exact"},{"name":"systemic sclerosis","type":"exact"}],"termid":"MONDO:0005100","xrefs":{"Monarch":{"xref_id":"0005100"}}}


id: PATO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape with properties between those of a square and those of a circle.","definition_xrefs":["wikipedia:Squircle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squircle","termid":"PATO:0002319"}


id: GO:0034004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = (1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol + diphosphate.","definition_xrefs":["EC:4.2.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"germacradienol synthase activity","secondary_identifiers":["RHEA:22436"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase [(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol-forming] activity","type":"related"}],"termid":"GO:0034004"}


id: MONDO:0018485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen storage disease due to acid maltase deficiency, late onset (AMDL), a form of Glycogen storage disease due to acid maltase deficiency (AMD), a degenerative metabolic myopathy particularly affecting respiratory and skeletal muscles, is characterized by an accumulation of glycogen in lysosomes.","definition_xrefs":["Orphanet:420429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease II","termid":"MONDO:0009290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005267","MONDO:0002561"],"is_obsolete":false,"name":"glycogen storage disease due to acid maltase deficiency, late-onset","secondary_identifiers":["MEDGEN:575206","GARD:21746","SCTID:722343009","UMLS:C0342753"],"synonyms":[{"name":"Alpha-1,4-glucosidase acid deficiency, late onset","type":"exact"},{"name":"Alpha-1,4-glucosidase acid deficiency, late-onset","type":"exact"},{"name":"GSD due to acid maltase deficiency, late onset","type":"exact"},{"name":"GSD due to acid maltase deficiency, late-onset","type":"exact"},{"name":"GSD type 2, late onset","type":"exact"},{"name":"GSD type 2, late-onset","type":"exact"},{"name":"GSD type II, late onset","type":"exact"},{"name":"GSD type II, late-onset","type":"exact"},{"name":"LOPD","type":"exact"},{"name":"Pompe disease, late onset","type":"exact"},{"name":"Pompe disease, late-onset","type":"exact"},{"name":"glycogen storage disease type 2, late onset","type":"exact"},{"name":"glycogen storage disease type 2, late-onset","type":"exact"},{"name":"glycogen storage disease type II, late onset","type":"exact"},{"name":"glycogen storage disease type II, late-onset","type":"exact"},{"name":"glycogenosis type 2, late onset","type":"exact"},{"name":"glycogenosis type 2, late-onset","type":"exact"},{"name":"glycogenosis type II, late onset","type":"exact"},{"name":"glycogenosis type II, late-onset","type":"exact"}],"termid":"MONDO:0018485","xrefs":{"Monarch":{"xref_id":"0018485"}}}


id: GO:0031362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that are tethered to the external side of the membrane only by a covalently attached anchor, such as a lipid group embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of external side of plasma membrane (obsolete GO:0031362)","synonyms":[{"name":"anchored to external leaflet of plasma membrane","type":"exact"},{"name":"anchored to external side of plasma membrane","type":"exact"}],"termid":"GO:0031362"}


id: MONDO:0022938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness goiter stippled epiphyses","termid":"MONDO:0022938","xrefs":{"Monarch":{"xref_id":"0022938"}}}


id: PBO:0085124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; involved in biogenesis of the 60S subunit of the ribosome; interacts with rRNA processing factors Cbf5p and Nop2p and with the nucleolar proteins Nop17p and Nip7p; null mutant is viable but growth is severely impaired","termid":"PBO:0085124"}


id: PBO:0058249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4536-2","termid":"PBO:0058249"}


id: PBO:0045746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 3, pseudogene","termid":"PBO:0045746"}


id: PBO:0063851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 4","termid":"PBO:0063851"}


id: GO:0102327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxoacyl-CoA = H+ + coenzyme A + a 3-oxoacid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxoacyl-CoA hydrolase activity (obsolete GO:0102327)","termid":"GO:0102327"}


id: PBO:0086528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YPR014C is not an essential gene","termid":"PBO:0086528"}


id: PBO:0072948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 28","termid":"PBO:0072948"}


id: PBO:0086619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086619"}


id: PBO:0055169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2593","termid":"PBO:0055169"}


id: PBO:0085129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein involved in pre-25S rRNA processing; also involved in biogenesis of large 60S ribosomal subunit; contains an RNA recognition motif (RRM); binds to Ebp2; similar to Nop13p and Nsr1p","termid":"PBO:0085129"}


id: GO:1903479
data:
  {"annotated_genes":["SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77795],"is_not":false,"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"Any actin filament organization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049","GO:0007010","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903479","terms_by_termid":{"GO:1903479":null}}


id: GO:0001405
data:
  {"annotated_genes":["SJAG_04432","SJAG_04014","SJAG_01597","SJAG_01615","SJAG_02077","SJAG_00373"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71324,74435,77097,99599,103647,112185],"is_not":false,"summary":null,"term":"GO:0001405"}]},"cv_name":"cellular_component","definition":"Protein complex located on the matrix side of the mitochondrial inner membrane and associated with the TIM23 mitochondrial import inner membrane translocase complex (GO:0005744); ATPase motor activity to drive import of proteins into the mitochondrial matrix.","definition_xrefs":["GOC:mcc","GOC:vw","PMID:14517234","PMID:14638855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"TIM23 mitochondrial import inner membrane translocase complex","termid":"GO:0005744"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_02077":null,"SJAG_04014":null,"SJAG_04432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"PAM complex, Tim23 associated import motor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PAM complex","type":"exact"},{"name":"mitochondrial import motor","type":"exact"},{"name":"pre-sequence translocase-associated import motor","type":"exact"},{"name":"presequence translocase-associated import motor","type":"exact"}],"termid":"GO:0001405","terms_by_termid":{"GO:0001405":null}}


id: PBO:0064485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase mu","termid":"PBO:0064485"}


id: PBO:0068173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 480","termid":"PBO:0068173"}


id: PBO:0055309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2736","termid":"PBO:0055309"}


id: PBO:0087290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA1 at HML; ALPHA1 encodes a transcriptional coactivator involved in the regulation of mating-type alpha-specific gene expression","termid":"PBO:0087290"}


id: FYPO:0003739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a replication origin by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA replication origin binding","synonyms":[{"name":"decreased origin binding","type":"exact"},{"name":"reduced DNA replication origin binding","type":"exact"}],"termid":"FYPO:0003739"}


id: PBO:0079360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3f pseudogene","termid":"PBO:0079360"}


id: PBO:0075586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 13","termid":"PBO:0075586"}


id: GO:0110053
data:
  {"annotated_genes":["SJAG_04100","SJAG_03086","SJAG_02700","SJAG_03455","SJAG_04522","SJAG_01993","SJAG_00521","SJAG_02566","SJAG_01894","SJAG_04479","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80565,76074,79531,92685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[74809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[107988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[68484,67351,77653,76986,79790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament organization.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of actin filament organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110053","terms_by_termid":{"GO:0030833":null,"GO:0032231":null,"GO:0034316":null,"GO:0051016":null}}


id: PBO:0048349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 60","termid":"PBO:0048349"}


id: PBO:0042808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 2 for microRNA let-7b","termid":"PBO:0042808"}


id: PBO:0066446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV3L intronic transcript 1","termid":"PBO:0066446"}


id: MONDO:0859334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia 50","secondary_identifiers":["UMLS:C5774272","MEDGEN:1824045","OMIM:620158"],"termid":"MONDO:0859334","xrefs":{"Monarch":{"xref_id":"0859334"}}}


id: PATO:0000862
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000862 pupillary reflex value (obsolete PATO:0000862)","termid":"PATO:0000862"}


id: MONDO:0017763
data:
  {"annotated_genes":["SJAG_01007","SJAG_02117"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"},{"annotations":[85457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of mineral absorption and transport","termid":"MONDO:0017761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02117":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of iron metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21355","ICD10CM:E83.1","UMLS:C5681031","MEDGEN:1826109","Orphanet:309842"],"termid":"MONDO:0017763","terms_by_termid":{"MONDO:0008787":null,"MONDO:0011417":null},"xrefs":{"Monarch":{"xref_id":"0017763"}}}


id: PBO:0073034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin receptor","termid":"PBO:0073034"}


id: GO:0031558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that directly activates any of the steps required for cell death by apoptosis as a result of a chemical stimulus.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of apoptosis in response to chemical stimulus (obsolete GO:0031558)","synonyms":[{"name":"induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:0031558"}


id: PBO:0029897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination_during_vegetative_growth","termid":"PBO:0029897"}


id: FYPO:0000223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer, and has a greater length:diameter ratio, than normal, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0000005"],"is_obsolete":false,"name":"elongated multiseptate vegetative cell","synonyms":[{"name":"elongated multiseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated multiseptate cells during vegetative growth","type":"exact"},{"name":"long multiseptate cells","type":"exact"}],"termid":"FYPO:0000223"}


id: MONDO:1011614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, horse","secondary_identifiers":["OMIA:001056-9796"],"termid":"MONDO:1011614","xrefs":{"Monarch":{"xref_id":"1011614"}}}


id: GO:0070490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Pup protein is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of Pup and the epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["PMID:18980670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein pupylation","synonyms":[{"name":"Pup-protein conjugation","type":"exact"},{"name":"pupylation","type":"exact"}],"termid":"GO:0070490"}


id: PBO:0064252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A1","termid":"PBO:0064252"}


id: GO:0031507
data:
  {"annotated_genes":["SJAG_00335","SJAG_04030","SJAG_04213","SJAG_02725","SJAG_04061","SJAG_00934","SJAG_02165","SJAG_03942","SJAG_03844","SJAG_01878","SJAG_01046","SJAG_02990","SJAG_02342","SJAG_04186","SJAG_04141","SJAG_01867","SJAG_03193","SJAG_00087","SJAG_03047","SJAG_00142","SJAG_02592","SJAG_02622","SJAG_03118","SJAG_02621","SJAG_02416","SJAG_01610","SJAG_00961","SJAG_01579","SJAG_03689","SJAG_02723","SJAG_03042","SJAG_00769","SJAG_01938","SJAG_00058","SJAG_01823","SJAG_02908","SJAG_01075","SJAG_01331","SJAG_04768","SJAG_01008","SJAG_02381","SJAG_03982","SJAG_02817","SJAG_01511","SJAG_01599","SJAG_02594","SJAG_01836","SJAG_00701","SJAG_03664","SJAG_03356","SJAG_03255","SJAG_02382","SJAG_04755","SJAG_04369","SJAG_01873","SJAG_03635","SJAG_03128","SJAG_00266","SJAG_02409","SJAG_00414","SJAG_00341","SJAG_01540","SJAG_04039","SJAG_00676","SJAG_02311","SJAG_04879","SJAG_03997","SJAG_02846","SJAG_05313","SJAG_01745","SJAG_04253","SJAG_03543","SJAG_02401","SJAG_03945","SJAG_01601","SJAG_04942","SJAG_03624","SJAG_03680","SJAG_04574","SJAG_00581","SJAG_02698","SJAG_01675","SJAG_02576","SJAG_00756","SJAG_02701","SJAG_00302","SJAG_02119","SJAG_00160","SJAG_03916","SJAG_02778"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70778,73553,74101,75184,77053,92967,94711,94969,114508,115399,115800,119565,119566],"is_not":false,"summary":null,"term":"GO:0031507"},{"annotations":[113991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140719"},{"annotations":[103589,94440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140718"},{"annotations":[96518,113006,99262,99479,103590,113005,103420,99505,113441,115646,91111,94441,88507,113004,117516,118145],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033696"},{"annotations":[107027,77644],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[108871],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[93187,112497,103144,113015,114811,113013,92432,94443,113683,114376,93806,72587,104454,113014,98610,103592,90568,108538,111659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031508"},{"annotations":[91705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140462"},{"annotations":[99322],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031453"},{"annotations":[91542],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090053"},{"annotations":[110729,91543,94734],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090055"},{"annotations":[113684,71219,112498,92433,104455,108539,72585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[98924,91170],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031445"},{"annotations":[100666,97540],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[118146],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[92224,118147,100667,118513,97541],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[109498,113443,108156,104456,107725,112245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031048"},{"annotations":[72038,104554,110871,99926,103595,114378,111660,112499,99486,113685,108353,118089,111596,119211,104457,94444,118490,112601,95882,114059,97085,93115,91631,108540,116375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030466"},{"annotations":[116929,104555,112500,110872,87848,91153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[106686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[114379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141194"},{"annotations":[118492,118090,99928,114696,97086,119212,89189,114958,114060,110873,111039,115816,116377,118375,89132,112602,95700,94456,106925,99487,91632,111597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"},{"annotations":[60079,92435,98611,104556,90569,99488,118493,103596,113686,90409,118091,114061,97087,91633,110874,114380,112501,94445,104458,111661,108541,119213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031509"},{"annotations":[116931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"An epigenetic gene silencing mechanism in which chromatin is compacted into heterochromatin, resulting in a chromatin conformation refractory to transcription. 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id: PBO:0112818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphate Quantity Regulator","termid":"PBO:0112818"}


id: PBO:0056101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6","termid":"PBO:0056101"}


id: MONDO:0003475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of ependymoma characterized by well formed papillae. Tumor cell processes abutting capillaries are usually GFAP-positive. Differential diagnoses include choroid plexus papilloma, papillary meningioma and metastatic papillary carcinoma. (Adapted from WHO)","definition_xrefs":["NCIT:C4319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary ependymoma","secondary_identifiers":["ICDO:9393/3","UMLS:C0334578","DOID:5505","MEDGEN:90810"],"synonyms":[{"name":"papillary ependymoma","type":"exact"}],"termid":"MONDO:0003475","xrefs":{"Monarch":{"xref_id":"0003475"}}}


id: MONDO:0006835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomerular disorder characterized by the electron microscopic finding of loss of podocyte foot processes. Light microscopic examination does not show glomerular changes. Patients present with proteinuria and nephrotic syndrome.","definition_xrefs":["NCIT:C34844"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nephrotic syndrome","termid":"MONDO:0005377"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"lipoid nephrosis","secondary_identifiers":["SCTID:44785005","MEDGEN:10307","MESH:D009402","DOID:10966","NANDO:1200720","MedDRA:10058325","UMLS:C0027721","EFO:1001020","NANDO:2200112"],"synonyms":[{"name":"MCNS","type":"related"},{"name":"idiopathic minimal change nephrotic syndrome","type":"related"},{"name":"lipoid nephrosis","type":"exact"},{"name":"minimal change disease","type":"exact"},{"name":"minimal change glomerulonephritis","type":"exact"},{"name":"minimal change glomerulopathy","type":"related"},{"name":"minimal change nephropathy","type":"exact"},{"name":"minimal change nephrotic syndrome","type":"related"},{"name":"nephrotic syndrome with lesion of minimal change glomerulonephritis","type":"related"},{"name":"nephrotic syndrome with lesion of minimal change nephrotic syndrome","type":"related"},{"name":"nil disease","type":"exact"}],"termid":"MONDO:0006835","xrefs":{"Monarch":{"xref_id":"0006835"}}}


id: PBO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 2","termid":"PBO:0061109"}


id: MONDO:0021072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant paraganglioma arising from the chromaffin cells of the paraganglia that are located along the sympathetic nerves. It includes extra-adrenal paragangliomas and paragangliomas that arise from the adrenal medulla. The latter are commonly referred to as pheochromocytomas. Representative examples of extra-adrenal sympathetic paragangliomas include the bladder, and superior and inferior paraaortic paragangliomas. Clinical signs are related to the secretion of catecholamines resulting in hypertension.","definition_xrefs":["NCIT:C4216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"sympathetic nervous system disorder","termid":"MONDO:0044993"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sympathetic paraganglioma","secondary_identifiers":["ICDO:8681/1","UMLS:C0334415","MEDGEN:137758","MESH:C531777","SCTID:399343007"],"synonyms":[{"name":"Chromaffinoma","type":"exact"},{"name":"chromaffin neoplasm","type":"exact"},{"name":"chromaffin tumor","type":"exact"},{"name":"chromaffin tumour","type":"exact"},{"name":"paraganglioma of sympathetic nervous system","type":"exact"},{"name":"sympathetic Paraganglionic neoplasm","type":"exact"},{"name":"sympathetic nervous system paraganglioma","type":"exact"},{"name":"sympathetic paraganglioma","type":"exact"}],"termid":"MONDO:0021072","xrefs":{"Monarch":{"xref_id":"0021072"}}}


id: PBO:0030798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030798"}


id: PBO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0000496"}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["PMID:17161604","GOC:imk"],"gene_count":0,"genotype_count":0,"name":"obsolete 'de novo' NAD biosynthetic process (obsolete GO:0034627)","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: SO:0000994
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that has a known consensus sequence.","direct_ancestors":[{"relation_name":"has_quality","term_name":"consensus","termid":"SO:0000993"},{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_region","synonyms":[{"name":"consensus region","type":"exact"}],"termid":"SO:0000994"}


id: GO:0160049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cGAS/STING signaling pathway.","definition_xrefs":["PMID:29875158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"cGAS/STING signaling pathway","termid":"GO:0140896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cGAS/STING signaling pathway","termid":"GO:0160049"}


id: GO:0034777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a recycling endosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"recycling endosome lumen","termid":"GO:0034777"}


id: PBO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ2 antisense RNA 1","termid":"PBO:0052206"}


id: PBO:0077064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 1","termid":"PBO:0077064"}


id: PBO:0085497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome polyubiquitin receptor; non-ATPase subunit of the 19S regulatory particle (RP) of the 26S proteasome that links the RP base to the lid; N-terminus plays a role in the assembly of the regulatory particle (RP); ubiquitin-interacting motif selectively binds to polyubiquitin chains; homolog of the mammalian S5a protein","termid":"PBO:0085497"}


id: MONDO:0859172
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87690],"is_not":false,"summary":null,"term":"MONDO:0859172"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic disease of fetus and newborn, RH-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1789316","OMIM:619462","UMLS:C0748400"],"termid":"MONDO:0859172","terms_by_termid":{"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0859172"}}}


id: GO:0160190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together the peroxisome and the mitochondrial outer membrane, establishing the localization of the peroxisome close to the mitochondrion.","definition_xrefs":["PMID:29720625","PMID:38669296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"peroxisome-mitochondrion membrane tether activity","termid":"GO:0160190"}


id: FYPO:0001292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CDP-diacylglycerol-serine O-phosphatidyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal CDP-diacylglycerol-serine O-phosphatidyltransferase activity","termid":"FYPO:0001291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased CDP-diacylglycerol-serine O-phosphatidyltransferase activity","synonyms":[{"name":"reduced CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"}],"termid":"FYPO:0001292"}


id: PBO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-improper_part_of","termid":"PBO:0017408"}


id: MOD:01816
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-hydroxy-L-tryptophan.","definition_xrefs":["RESID:AA0542","PubMed:11714714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-hydroxy-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2'-hydroxy-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-(2-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-hydroxy-L-tryptophan","type":"exact"},{"name":"2-hydroxy-tryptophan","type":"exact"}],"termid":"MOD:01816"}


id: PBO:0053540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 544","termid":"PBO:0053540"}


id: GO:0004780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H+ + sulfate = 5'-adenylyl sulfate + phosphate.","definition_xrefs":["RHEA:16529","EC:2.7.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate adenylyltransferase activity","termid":"GO:0004779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfate adenylyltransferase (ADP) activity","secondary_identifiers":["KEGG_REACTION:R00530","MetaCyc:SULFATE-ADENYLYLTRANSFERASE-ADP-RXN"],"synonyms":[{"name":"ADP-sulfurylase activity","type":"related"},{"name":"ADP:sulfate adenylyltransferase activity","type":"exact"},{"name":"adenosine diphosphate sulfurylase activity","type":"related"},{"name":"sulfate (adenosine diphosphate) adenylyltransferase activity","type":"related"},{"name":"sulphate adenylyltransferase (ADP) activity","type":"exact"}],"termid":"GO:0004780"}


id: PBO:0067297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 382, pseudogene","termid":"PBO:0067297"}


id: GO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of low molecular mass.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"low molecular weight kininogen binding","synonyms":[{"name":"LK binding","type":"exact"},{"name":"LMW kininogen binding","type":"exact"}],"termid":"GO:0030986"}


id: PBO:0038764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 1","termid":"PBO:0038764"}


id: MONDO:1012958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atactic disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atactic disorder, non-human animal","termid":"MONDO:1012958","xrefs":{"Monarch":{"xref_id":"1012958"}}}


id: PBO:0052774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 66","termid":"PBO:0052774"}


id: PBO:0072315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 1","termid":"PBO:0072315"}


id: MONDO:0020611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--kell system (obsolete MONDO:0020611)","secondary_identifiers":["OMIM:110900"],"synonyms":[{"name":"BLOOD GROUP--KELL SYSTEM","type":"related"},{"name":"Blood Group--Kell-Cellano System","type":"related"},{"name":"K(0)","type":"related"},{"name":"KEL","type":"related"},{"name":"Kell-Null","type":"related"},{"name":"Ko","type":"related"},{"name":"blood group, Kell","type":"exact"}],"termid":"MONDO:0020611","xrefs":{"Monarch":{"xref_id":"0020611"}}}


id: GO:0140303
data:
  {"annotated_genes":["SJAG_01945","SJAG_02957","SJAG_02943","SJAG_00018","SJAG_01470","SJAG_03774","SJAG_03050","SJAG_01731","SJAG_00587","SJAG_02897","SJAG_00589","SJAG_01095","SJAG_02581","SJAG_00669","SJAG_03076","SJAG_05209","SJAG_02114","SJAG_03100","SJAG_02132","SJAG_02516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102698,105455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015247"},{"annotations":[90894,90899,90896,90898,90895,90893,90897,90900,90892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[112948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034202"},{"annotations":[94788,98288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[99836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[98290,94790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[100561,94791,98291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[94792,98292,99838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[99839,112891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[94793,98293,112892,99840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[101781,73571,103958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"}]},"cv_name":"molecular_function","definition":"Enables the transport of a lipid from a region of a membrane to a different region on the same membrane.","definition_xrefs":["PMID:16828084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03076":null,"SJAG_03100":null,"SJAG_03774":null,"SJAG_05209":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intramembrane lipid transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"flippase activity","type":"related"},{"name":"translocase activity","type":"broad"}],"termid":"GO:0140303","terms_by_termid":{"GO:0015247":null,"GO:0017128":null,"GO:0034202":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: PBO:0090845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex WD repeat protein Prp5","termid":"PBO:0090845"}


id: PBO:0017743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent flavin oxidoreductase (predicted), possibly riboflavin reductase","termid":"PBO:0017743"}


id: GO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"urea metabolic process","termid":"GO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0071941"],"is_obsolete":false,"name":"regulation of urea metabolic process","synonyms":[{"name":"regulation of urea metabolism","type":"exact"}],"termid":"GO:0034255"}


id: PBO:0089967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein","termid":"PBO:0089967"}


id: PBO:0027938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glucose_consumption","termid":"PBO:0027938"}


id: PBO:0088089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose pyrophosphorylase (UGPase); catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p; involved in PKA-mediated oxidative stress resistance and long-term survival in stationary phase; UGP1 has a paralog, YHL012W, that arose from the whole genome duplication","termid":"PBO:0088089"}


id: PBO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_vacuolar_transport","termid":"PBO:0031611"}


id: GO:0099143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The actin cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"presynaptic actin cytoskeleton","termid":"GO:0099143"}


id: PBO:0073400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 3","termid":"PBO:0073400"}


id: PBO:0083910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone reductase; role in apoptosis-like cell death; may be involved in quinone detoxification; expression elevated at low temperature; sequesters the Cin5p transcription factor in the cytoplasm in complex with the proteasome under reducing conditions","termid":"PBO:0083910"}


id: MONDO:0005526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious infectious disorder that follows wound contamination by the Gram-positive bacterium Clostridium tetani. The bacteria produce a neurotoxin called tetanospasmin, which causes muscle spasm in the jaw and other anatomic sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"},{"relation_name":"is_a","term_name":"Clostridium infectious disease","termid":"MONDO:0024388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetanus","secondary_identifiers":["Orphanet:3299","MedDRA:10043376","EFO:0005593","SCTID:276202003","UMLS:C0039614","icd11.foundation:1793762788","MEDGEN:21489","DOID:11338","MESH:D013742","GARD:5144","ICD9:037","NCIT:C85185","SCTID:76902006"],"synonyms":[{"name":"Clostridium tetani caused infectious disease of the nervous system","type":"exact"},{"name":"Clostridium tetani infectious disease of the nervous system","type":"exact"},{"name":"clostridial tetanus","type":"exact"},{"name":"infection due to Clostridium tetani","type":"exact"},{"name":"lockjaw","type":"related"}],"termid":"MONDO:0005526","xrefs":{"Monarch":{"xref_id":"0005526"}}}


id: GO:0032538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of host-seeking behavior","synonyms":[{"name":"regulation of host-seeking behaviour","type":"exact"}],"termid":"GO:0032538"}


id: GO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase.","definition_xrefs":["RESID:AA0279","RESID:AA0280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"peroxidase-heme linkage","synonyms":[{"name":"peroxidase-haem linkage","type":"exact"}],"termid":"GO:0018186"}


id: PBO:0081851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 784","termid":"PBO:0081851"}


id: PBO:0034040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates","termid":"PBO:0034040"}


id: GO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.","definition_xrefs":["GOC:cilia","PMID:14570576","PMID:22118932","PMID:23945166","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intraciliary transport particle","synonyms":[{"name":"IFT complex","type":"related"},{"name":"intraflagellar transport complex","type":"exact"},{"name":"intraflagellar transport particle","type":"exact"}],"termid":"GO:0030990"}


id: MONDO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basilar artery occlusion","secondary_identifiers":["SCTID:195180004","UMLS:C0265098","DOID:13446","ICD9:433.01","ICD9:433.0","ICD9:433.00","MEDGEN:539076"],"termid":"MONDO:0001715","xrefs":{"Monarch":{"xref_id":"0001715"}}}


id: PBO:0080558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 2 pseudogene 1","termid":"PBO:0080558"}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_02068","SJAG_00158","SJAG_04790"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75390,75513,77784],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a sterol ester + H2O = a fatty acid + a sterol + H+.","definition_xrefs":["RHEA:10100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"sterol ester esterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-192417","MetaCyc:STEROL-ESTERASE-RXN","Reactome:R-HSA-6813720","EC:3.1.1.13","Reactome:R-HSA-8865667"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"sterol esterase activity","type":"exact"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: PBO:0055659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3099","termid":"PBO:0055659"}


id: PBO:0069535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 805, pseudogene","termid":"PBO:0069535"}


id: MONDO:0014822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"15q14 microdeletion syndrome is a recently described syndrome characterized by developmental delay, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:261190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15q14 microdeletion syndrome","secondary_identifiers":["GARD:17242","MEDGEN:930899","OMIM:616898","SCTID:719575008","UMLS:C4305230"],"synonyms":[{"name":"Del(15)(q14)","type":"exact"},{"name":"chromosome 15q14 deletion syndrome","type":"related"},{"name":"monosomy 15q14","type":"exact"}],"termid":"MONDO:0014822","xrefs":{"Monarch":{"xref_id":"0014822"}}}


id: GO:0014721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The twitch skeletal muscle responds to neurostimulations with a contraction followed by a relaxation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"twitch skeletal muscle contraction","termid":"GO:0014721"}


id: PBO:0041258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 putative open reading frame 220","termid":"PBO:0041258"}


id: GO:0046662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the deposition of eggs, either fertilized or not, upon a surface or into a medium.","definition_xrefs":["PMID:11932766","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of egg-laying behavior","secondary_identifiers":["GO:0048042"],"synonyms":[{"name":"regulation of oviposition","type":"exact"},{"name":"regulation of post-mating oviposition","type":"narrow"}],"termid":"GO:0046662"}


id: FYPO:0005079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at centromere central core","synonyms":[{"name":"normal protein localisation to chromatin at centromere central core","type":"exact"},{"name":"normal protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric central core","type":"exact"}],"termid":"FYPO:0005079"}


id: PBO:0054339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1732","termid":"PBO:0054339"}


id: GO:0160136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(516) in 16S rRNA = pseudouridine(516) in 16S rRNA.","definition_xrefs":["RHEA:38867","EC:5.4.99.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"16S rRNA pseudouridine(516) synthase activity","termid":"GO:0160136"}


id: GO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum development","termid":"GO:0048726"}


id: GO:0008718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor.","definition_xrefs":["RHEA:18125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase activity","synonyms":[{"name":"D-amino-acid:(acceptor) oxidoreductase (deaminating)","type":"exact"},{"name":"D-amino-acid:acceptor oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0008718"}


id: MONDO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Thelazia.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thelaziasis","secondary_identifiers":["MEDGEN:576041","SCTID:46477004","UMLS:C0344058","icd11.foundation:1803398353","DOID:0050261","ICD9:128.8"],"synonyms":[{"name":"Thelazia caused disease or disorder","type":"exact"},{"name":"Thelazia disease or disorder","type":"exact"},{"name":"Thelazia infectious disease","type":"exact"},{"name":"conjunctival spirurosis","type":"related"},{"name":"infection by Thelazia","type":"exact"},{"name":"infection caused by Thelazia","type":"related"},{"name":"thelaziasis","type":"exact"},{"name":"thelaziosis","type":"related"},{"name":"verminous ophthalmia","type":"related"}],"termid":"MONDO:0000299","xrefs":{"Monarch":{"xref_id":"0000299"}}}


id: PBO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, conserved in yeast and apicomplexa","termid":"PBO:0090362"}


id: FYPO:0000871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000871"}


id: PBO:0013117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl6","termid":"PBO:0013117"}


id: GO:0046687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chromate","synonyms":[{"name":"chromate sensitivity/resistance","type":"related"}],"termid":"GO:0046687"}


id: MONDO:0012772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stevenson-Carey syndrome","secondary_identifiers":["UMLS:C2677763","OMIM:611961","MESH:C567446","MEDGEN:383183"],"synonyms":[{"name":"Stevenson-Carey syndrome","type":"exact"}],"termid":"MONDO:0012772","xrefs":{"Monarch":{"xref_id":"0012772"}}}


id: GO:0048080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cuticle pigmentation","synonyms":[{"name":"down regulation of cuticle pigmentation","type":"exact"},{"name":"down-regulation of cuticle pigmentation","type":"exact"},{"name":"downregulation of cuticle pigmentation","type":"exact"},{"name":"inhibition of cuticle pigmentation","type":"narrow"}],"termid":"GO:0048080"}


id: PBO:0070762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 18","termid":"PBO:0070762"}


id: MONDO:0011827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital defect characterized by the failure of the ductus arteriosus to close soon after birth. As a consequence, blood from the aorta mixes with blood from the pulmonary artery. If untreated, it may lead to congestive heart failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"patent ductus arteriosus","secondary_identifiers":["NANDO:2100084","Orphanet:706","SCTID:83330001","UMLS:C0013274","MEDGEN:4415","ICD9:747.0","ICD10CM:Q25.0","MESH:D004374","DOID:13832","NCIT:C84492","NANDO:2200264","OMIMPS:607411"],"synonyms":[{"name":"PDA","type":"exact"},{"name":"ductus arteriosus, patent","type":"related"},{"name":"patency of the ductus arteriosus","type":"related"},{"name":"patent ductus arteriosus","type":"exact"},{"name":"patent ductus arteriosus familial (type)","type":"related"},{"name":"patent ductus botalli","type":"exact"},{"name":"persistent patency of the arterial duct","type":"exact"}],"termid":"MONDO:0011827","xrefs":{"Monarch":{"xref_id":"0011827"}}}


id: GO:0042500
data:
  {"annotated_genes":["SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76428],"is_not":false,"summary":null,"term":"GO:0042500"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain, occurring within a membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0008233","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aspartic endopeptidase activity, intramembrane cleaving","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9708457","Reactome:R-HSA-8863101"],"termid":"GO:0042500","terms_by_termid":{"GO:0042500":null}}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: GO:0000015
data:
  {"annotated_genes":["SJAG_02107","SJAG_02369","SJAG_00461"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70204,70761,77368],"is_not":false,"summary":null,"term":"GO:0000015"}]},"cv_name":"cellular_component","definition":"A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphopyruvate hydratase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"enolase complex","type":"exact"}],"termid":"GO:0000015","terms_by_termid":{"GO:0000015":null}}


id: PBO:0082737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition","termid":"PBO:0082737"}


id: PATO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000182 abdominal tone (obsolete PATO:0000182)","termid":"PATO:0000182"}


id: PBO:0027201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_nuclear_microtubules_protruding_through_nuclear_envelope_during_interphase","termid":"PBO:0027201"}


id: PBO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 3, pseudogene","termid":"PBO:0050653"}


id: GO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type II interferon","termid":"GO:0034341"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type II interferon","synonyms":[{"name":"cellular response to gamma-interferon","type":"related"},{"name":"cellular response to immune interferon","type":"exact"},{"name":"cellular response to interferon-gamma","type":"broad"},{"name":"cellular response to type II IFN","type":"broad"}],"termid":"GO:0071346"}


id: GO:2000653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic imprinting.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of genetic imprinting (obsolete GO:2000653)","synonyms":[{"name":"regulation of DNA imprinting","type":"exact"}],"termid":"GO:2000653"}


id: GO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to CORE element, a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery in order to modulate transcription by RNA polymerase I.","definition_xrefs":["PMID:8057832","PMID:14969726","GOC:txnOH","PMID:12865296"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase I CORE element sequence-specific binding (obsolete GO:0001169)","synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"RNA polymerase I core promoter sequence-specific DNA binding transcription factor","type":"exact"}],"termid":"GO:0001169"}


id: PBO:0057049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 136","termid":"PBO:0057049"}


id: PBO:0061428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 2","termid":"PBO:0061428"}


id: PBO:0065437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 10","termid":"PBO:0065437"}


id: PBO:0085740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription termination by RNA polymerase II; interacts with exonuclease Rat1p and Rai1p; has an RPR domain (carboxy-terminal domain interacting domain); also involved in regulation of Ty1 transposition","termid":"PBO:0085740"}


id: MONDO:0009409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypervitaminosis a, susceptibility to","secondary_identifiers":["MEDGEN:343435","OMIM:240150","UMLS:C1855883"],"synonyms":[{"name":"hypervitaminosis a, susceptibility to","type":"exact"}],"termid":"MONDO:0009409","xrefs":{"Monarch":{"xref_id":"0009409"}}}


id: GO:0052578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,E)-alpha-farnesene + diphosphate.","definition_xrefs":["MetaCyc:RXN-8574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-farnesene synthase activity","secondary_identifiers":["RHEA:27421"],"synonyms":[{"name":"(E,E)-alpha-farnesene synthase activity","type":"exact"}],"termid":"GO:0052578"}


id: PBO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil permease","termid":"PBO:0001211"}


id: MONDO:0060577
data:
  {"annotated_genes":["SJAG_04762"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85578],"is_not":false,"summary":null,"term":"MONDO:0060577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, ataxia, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22576","OMIM:617709","UMLS:C4540188","MEDGEN:1613354"],"synonyms":[{"name":"NEDMAS","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, ataxia, and seizures","type":"exact"}],"termid":"MONDO:0060577","terms_by_termid":{"MONDO:0060577":null},"xrefs":{"Monarch":{"xref_id":"0060577"}}}


id: GO:0030773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxymellein + S-adenosyl-L-methionine = 6-methoxymellein + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:15201","EC:2.1.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"6-hydroxymellein O-methyltransferase activity","secondary_identifiers":["MetaCyc:6-HYDROXYMELLEIN-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R03934"],"synonyms":[{"name":"6-hydroxymellein methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:6-hydroxymellein 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030773"}


id: PBO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl aminopeptidase","termid":"PBO:0046335"}


id: PBO:0077832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p73","termid":"PBO:0077832"}


id: PBO:0087182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A34.5; essential for nucleolar assembly and for high polymerase loading rate; nucleolar localization depends on Rpa49p","termid":"PBO:0087182"}


id: PBO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 6","termid":"PBO:0071642"}


id: GO:0014731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the cytoskeleton composed of spectrin, protein 4.1 and ankyrin. Spectrin-associated cytoskeleton is associated with the plasma membrane.","definition_xrefs":["GOC:mtg_muscle","PMID:15970557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spectrin-associated cytoskeleton","termid":"GO:0014731"}


id: PBO:0113524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase Y; processed to mature form by Prb1p; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway","termid":"PBO:0113524"}


id: PBO:0080244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 7 pseudogene","termid":"PBO:0080244"}


id: PBO:0075824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 1","termid":"PBO:0075824"}


id: PATO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A trisomy quality inhering in a bearer by virtue of the bearer's having extra chromosomal material in only some of it's cells.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy","termid":"PATO:0001389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy","termid":"PATO:0001391"}


id: PBO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein KEN box","termid":"PBO:0002174"}


id: GO:0015066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of alpha-amylase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"alpha-amylase inhibitor activity","termid":"GO:0015066"}


id: PBO:0084168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on nonfermentable carbon sources, and heterodimerizes with Mpc1p to form the respiratory isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC3 paralog, MPC2, heterodimerizes with Mpc1p to form the fermentative MPC isoform; protein abundance increases in response to DNA replication stress","termid":"PBO:0084168"}


id: GO:0018013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal glycine of proteins to form the derivative N-methylglycine.","definition_xrefs":["RESID:AA0063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine methylation","termid":"GO:0018013"}


id: PBO:0080023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 9, pseudogene","termid":"PBO:0080023"}


id: PBO:0054428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1824","termid":"PBO:0054428"}


id: PBO:0088380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase","termid":"PBO:0088380"}


id: MONDO:0010065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinocerebellar ataxia type 2","termid":"MONDO:0008458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar degeneration with slow eye movements","secondary_identifiers":["OMIM:271322"],"synonyms":[{"name":"SDSEM","type":"related"},{"name":"spinocerebellar degeneration with slow eye movements","type":"exact"}],"termid":"MONDO:0010065","xrefs":{"Monarch":{"xref_id":"0010065"}}}


id: PBO:0081398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF236 divergent transcript","termid":"PBO:0081398"}


id: MONDO:0035562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"human prion disease","termid":"MONDO:0018926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"acquired human prion disease","secondary_identifiers":["MEDGEN:1842786","Orphanet:576360","UMLS:C5680357","GARD:22328"],"synonyms":[{"name":"infectious human prion disease","type":"exact"}],"termid":"MONDO:0035562","xrefs":{"Monarch":{"xref_id":"0035562"}}}


id: PBO:0014270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CAR1","termid":"PBO:0014270"}


id: MONDO:0100265
data:
  {"annotated_genes":["SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"Any peroxisome biogenesis disorder due to PEX5 in which the cause of the disease is a mutation in the PEX7-binding domain of the PEX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"non-Zellweger spectrum disorder","termid":"MONDO:0100322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005328","MONDO:0005244","MONDO:0005559","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX5 defect in the PEX7-binding domain","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"peroxisome biogenesis disorder due to PEX5 defect in the PEX7-binding domain","type":"exact"}],"termid":"MONDO:0100265","terms_by_termid":{"MONDO:0014743":null},"xrefs":{"Monarch":{"xref_id":"0100265"}}}


id: GO:0050046
data:
  {"annotated_genes":["SJAG_03509","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90018,107903],"is_not":false,"summary":null,"term":"GO:0050046"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a delta(7)-sterol + 2 ferrocytochrome b5 + O2 + 2 H+ -> a delta(5,7)-sterol + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:54320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"delta7-sterol 5(6)-desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.14.19.20","MetaCyc:RXN-16378"],"synonyms":[{"name":"5-DES","type":"related"},{"name":"delta7-sterol 5-desaturase activity","type":"related"},{"name":"delta7-sterol delta5-dehydrogenase activity","type":"related"},{"name":"delta7-sterol-C5(6)-desaturase activity","type":"related"},{"name":"lathosterol 5-desaturase activity","type":"related"},{"name":"lathosterol oxidase activity","type":"exact"}],"termid":"GO:0050046","terms_by_termid":{"GO:0050046":null}}


id: PBO:0071099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 101","termid":"PBO:0071099"}


id: PBO:0089984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Syp1","termid":"PBO:0089984"}


id: PBO:0058419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4788","termid":"PBO:0058419"}


id: GO:0052735
data:
  {"annotated_genes":["SJAG_00499","SJAG_04453"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79502,110541],"is_not":false,"summary":null,"term":"GO:0052735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = an N3-methylcytidine in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00499":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003824","GO:0016740","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA (cytidine-3-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-3-)-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:tRNA cytosine-3-methyltransferase activity","type":"exact"},{"name":"tRNA (cytosine 3)-methyltransferase activity","type":"exact"},{"name":"tRNA (cytosine-3-)-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine 3-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine-3-methyltransferase activity","type":"exact"},{"name":"transfer ribonucleate cytosine 3-methyltransferase activity","type":"exact"}],"termid":"GO:0052735","terms_by_termid":{"GO:0052735":null}}


id: PBO:0057575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 802","termid":"PBO:0057575"}


id: MONDO:0011825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcus, group A, severity of infection by","secondary_identifiers":["UMLS:C1846298","OMIM:607395","MEDGEN:375858"],"synonyms":[{"name":"streptococcus, group A, severity of infection by","type":"exact"}],"termid":"MONDO:0011825","xrefs":{"Monarch":{"xref_id":"0011825"}}}


id: PBO:0067958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 260","termid":"PBO:0067958"}


id: PBO:0047068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 1","termid":"PBO:0047068"}


id: GO:0042744
data:
  {"annotated_genes":["SJAG_01199","SJAG_03166","SJAG_01216","SJAG_00141","SJAG_04953","SJAG_04823","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70699,71358,76183,95561,100365,105418,109217],"is_not":false,"summary":null,"term":"GO:0042744"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"H2O2 catabolic process","type":"exact"},{"name":"H2O2 scavenging","type":"related"},{"name":"detoxification of H2O2","type":"related"},{"name":"detoxification of hydrogen peroxide","type":"related"},{"name":"hydrogen peroxide breakdown","type":"exact"},{"name":"hydrogen peroxide catabolism","type":"exact"},{"name":"hydrogen peroxide degradation","type":"exact"},{"name":"hydrogen peroxide removal","type":"related"},{"name":"hydrogen peroxide scavenging","type":"related"}],"termid":"GO:0042744","terms_by_termid":{"GO:0042744":null}}


id: MONDO:0004785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the eyelids near the eyelashes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharitis","secondary_identifiers":["ICD9:373.9","UMLS:C0005741","ICD10CM:H01.0","DOID:9423","EFO:0009536","ICD9:373.8","ICD9:373.4","MESH:D001762","ICD9:373.0","ICD9:373.00","NCIT:C112183","SCTID:41446000","MEDGEN:598"],"synonyms":[{"name":"eyelid inflammation","type":"exact"},{"name":"inflammation of eyelid","type":"exact"}],"termid":"MONDO:0004785","xrefs":{"Monarch":{"xref_id":"0004785"}}}


id: GO:0015844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"monoamine transport","secondary_identifiers":["GO:0015873"],"termid":"GO:0015844"}


id: GO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"}


id: FYPO:0007449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localization to ER, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007449"}


id: PBO:0046263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 2","termid":"PBO:0046263"}


id: PBO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3/PP2B/calcineurin subfamily","termid":"PBO:0004243"}


id: PBO:0079066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 2-1","termid":"PBO:0079066"}


id: GO:0007075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase III promoter as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis, from RNA polymerase III promoter (obsolete GO:0007075)","synonyms":[{"name":"activation of transcription on exit from mitosis, from Pol III promoter","type":"narrow"},{"name":"activation of transcription on exit from mitosis, from RNA polymerase III promoter","type":"narrow"}],"termid":"GO:0007075"}


id: PBO:0024838
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ATM1","termid":"PBO:0024838"}


id: MONDO:0021509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the myocardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of myocardium","termid":"MONDO:0021380"},{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of myocardium","secondary_identifiers":["NCIT:C4607","UMLS:C0347253","MEDGEN:83862","SCTID:92238001","icd11.foundation:2097885721"],"synonyms":[{"name":"benign myocardial neoplasm","type":"exact"},{"name":"benign myocardial tumor","type":"exact"},{"name":"benign myocardial tumour","type":"exact"},{"name":"benign neoplasm of the myocardium","type":"exact"},{"name":"benign tumor of myocardium","type":"exact"},{"name":"benign tumor of the myocardium","type":"exact"},{"name":"benign tumour of myocardium","type":"exact"},{"name":"benign tumour of the myocardium","type":"exact"},{"name":"myocardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021509","xrefs":{"Monarch":{"xref_id":"0021509"}}}


id: MONDO:0004154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central nervous system embryonal carcinoma (obsolete MONDO:0004154)","termid":"MONDO:0004154","xrefs":{"Monarch":{"xref_id":"0004154"}}}


id: MONDO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Median cleft of the upper lip and maxilla is a rare, congenital, developmental defect during embryogenesis characterized by a midline vertical cleft through the upper lip and premaillary bone (can also involve the nasal septum and central nervous system). The phenotypic spectrum is highly variable (ranging from a simple vermillion notch to a wide complete cleft) and hypo/hypertelorism, telecanthus, monophthalmia, flat or cleft nose, wide columella, median alveolar cleft and cranial malformations may be associated.","definition_xrefs":["Orphanet:141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"median cleft of the upper lip and maxilla","secondary_identifiers":["MEDGEN:784645","UMLS:C3697381","GARD:19966"],"termid":"MONDO:0015413","xrefs":{"Monarch":{"xref_id":"0015413"}}}


id: PBO:0082799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic; promotes association of TRAPPII-specific subunits with the TRAPP core complex; sedlin related; human Sedlin mutations cause SEDT, a skeletal disorder","termid":"PBO:0082799"}


id: PBO:0077734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 2","termid":"PBO:0077734"}


id: PBO:0056792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 1","termid":"PBO:0056792"}


id: MONDO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called B acute lymphoblastic leukemia. When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001)","definition_xrefs":["NCIT:C8936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell acute lymphoblastic leukemia","secondary_identifiers":["UMLS:C1292769","EFO:0000094","SCTID:277571004","DOID:0080630","DOID:7061","MEDGEN:226949"],"synonyms":[{"name":"B lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B lymphoblastic lymphoma/leukemia","type":"related"},{"name":"precursor B-lymphoblastic lymphoma/leukemia","type":"exact"}],"termid":"MONDO:0004947","xrefs":{"Monarch":{"xref_id":"0004947"}}}


id: PBO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 25","termid":"PBO:0075272"}


id: PATO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001136 ig e concentration (obsolete PATO:0001136)","termid":"PATO:0001136"}


id: PBO:0072145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 22","termid":"PBO:0072145"}


id: PBO:0064714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 50","termid":"PBO:0064714"}


id: MONDO:0014772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cleft lip/palate in which the cause of the disease is a mutation in the DLX4 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip/palate","termid":"MONDO:0016044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 15","secondary_identifiers":["MEDGEN:909661","OMIM:616788","UMLS:C4225209","DOID:0080408","GARD:18307"],"synonyms":[{"name":"DLX4 cleft lip/palate","type":"exact"},{"name":"OFC15","type":"exact"},{"name":"cleft lip/palate caused by mutation in DLX4","type":"exact"},{"name":"orofacial cleft 15","type":"exact"},{"name":"orofacial cleft type 15","type":"exact"}],"termid":"MONDO:0014772","xrefs":{"Monarch":{"xref_id":"0014772"}}}


id: MONDO:0600005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An allergic disease involving venom.","definition_xrefs":["PMID:26154789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"venom allergy","secondary_identifiers":["UMLS:C4510560","MEDGEN:1387536"],"synonyms":[{"name":"IgE-mediated venom hypersensitivity","type":"exact"},{"name":"venom hypersensitivity","type":"exact"}],"termid":"MONDO:0600005","xrefs":{"Monarch":{"xref_id":"0600005"}}}


id: MONDO:1040041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exudative vitreoretinopathy caused by a variant in the FZD4 gene.","definition_xrefs":["PMID:15035989","PMID:21868098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"FZD4-related exudative vitreoretinopathy","synonyms":[{"name":"FZD4-related exudative vitreoretinopathy","type":"exact"}],"termid":"MONDO:1040041","xrefs":{"Monarch":{"xref_id":"1040041"}}}


id: GO:0051857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of organism on or near symbiont surface (obsolete GO:0051857)","synonyms":[{"name":"growth or development of organism during interaction with symbiont","type":"exact"},{"name":"growth or development of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0051857"}


id: GO:0098935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in dendrites.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"dendritic transport","synonyms":[{"name":"dendrite cargo transport","type":"exact"}],"termid":"GO:0098935"}


id: GO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a semicircular canal epithelial cell acquires the structural features that allow it to contribute to the process of semicircular canal fusion.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"semicircular canal fusion","termid":"GO:0060879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in semicircular canal fusion","termid":"GO:0060880"}


id: PBO:0058224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4514","termid":"PBO:0058224"}


id: PBO:0011504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011504"}


id: PBO:0078682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 15-1","termid":"PBO:0078682"}


id: GO:1900589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of violaceol I.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"violaceol I metabolic process","termid":"GO:1900588"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"violaceol I catabolic process","synonyms":[{"name":"violaceol I breakdown","type":"exact"},{"name":"violaceol I catabolism","type":"exact"},{"name":"violaceol I degradation","type":"exact"}],"termid":"GO:1900589"}


id: GO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + N(1),N(12)-diacetylspermine + O2 = 3-acetamidopropanal + H2O2 + N(1)-acetylspermidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity (obsolete GO:0052899)","termid":"GO:0052899"}


id: MONDO:1012960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herediatary cerebellar ataxia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, non-human animal","termid":"MONDO:1012956"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960","xrefs":{"Monarch":{"xref_id":"1012960"}}}


id: PBO:0040353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 2","termid":"PBO:0040353"}


id: PBO:0034125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_symptom","termid":"PBO:0034125"}


id: GO:0070126
data:
  {"annotated_genes":["SJAG_00286","SJAG_01518","SJAG_05221","SJAG_04862","SJAG_00308","SJAG_03232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95861,96296,99007,102432,105073,111912],"is_not":false,"summary":null,"term":"GO:0070126"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in a mitochondrion, usually in response to a termination codon (note that mitochondria use variants of the universal genetic code that differ between different taxa).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_01518":null,"SJAG_03232":null,"SJAG_04862":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial translational termination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5419276"],"synonyms":[{"name":"mitochondrial translation termination","type":"exact"}],"termid":"GO:0070126","terms_by_termid":{"GO:0070126":null}}


id: FYPO:0005960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a mitotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PMID:15797925","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000120","FYPO:0000002","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"multipolar mitotic spindle","synonyms":[{"name":"multipolar spindle during mitosis","type":"exact"},{"name":"multipolar spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0005960"}


id: PBO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone fold","termid":"PBO:0000297"}


id: PBO:0065818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B-EGLN2 readthrough (NMD candidate)","termid":"PBO:0065818"}


id: PBO:0004152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1-UNC-like protein involved protein folding in the ER (predicted)","termid":"PBO:0004152"}


id: MONDO:0008960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare demyelinating hereditary motor and sensory neuropathy characterized by early-onset, slowly progressive, distal muscular weakness and atrophy with no sensory impairment, congenital sensorineural deafness and mild intellectual disability (with absence of normal speech development). The absence of large myelinated fibers on sural nerve biopsy is equally characteristic of the disease.","definition_xrefs":["Orphanet:90103"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease-hearing loss-intellectual disability syndrome","secondary_identifiers":["GARD:16786","MEDGEN:348419","OMIM:214370","SCTID:715666007","UMLS:C1861669"],"synonyms":[{"name":"Charcot-Marie-Tooth disease and deafness","type":"related"},{"name":"Charcot-Marie-Tooth disease-hearing loss-intellectual disability syndrome","type":"exact"},{"name":"Charcot-Marie-tooth disease-deafness-intellectual disability syndrome","type":"narrow"},{"name":"deafness with Charcot-Marie-Tooth disease","type":"related"},{"name":"hereditary motor and sensory neuropathy with deafness, intellectual disability and absent sensory large myelinated fibers","type":"exact"},{"name":"hereditary motor and sensory neuropathy with deafness, intellectual disability and absent sensory large myelinated fibres","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, with deafness, intellectual disability, and absent sensory large myelinated fibers","type":"related"},{"name":"neuropathy, hereditary motor and sensory, with deafness, intellectual disability, and absent sensory large myelinated fibres","type":"related"},{"name":"neuropathy, hereditary motor and sensory, with deafness, mental retardation, and absent sensory large myelinated fibers","type":"related"},{"name":"neuropathy, hereditary motor and sensory, with deafness, mental retardation, and absent sensory large myelinated fibres","type":"related"}],"termid":"MONDO:0008960","xrefs":{"Monarch":{"xref_id":"0008960"}}}


id: GO:0019042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which, after initial infection, a virus lies dormant within a cell and viral production ceases. The process ends when the virus switches from latency and starts to replicate.","definition_xrefs":["GOC:jl","VZ:3970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral latency","secondary_identifiers":["GO:0075710","GO:0030069"],"synonyms":[{"name":"latent virus infection","type":"exact"},{"name":"phage lysogeny","type":"exact"},{"name":"viral dormancy","type":"exact"}],"termid":"GO:0019042"}


id: GO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type IX trimer","termid":"GO:0005594"}


id: PBO:0034184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_with","termid":"PBO:0034184"}


id: MONDO:0054637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome-like disorder with loose anagen hair","termid":"MONDO:0011899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome-like disorder with loose anagen hair 1","secondary_identifiers":["DOID:0080692","UMLS:C4478716","OMIM:607721","MEDGEN:1379805","NCIT:C176939"],"synonyms":[{"name":"NSLH","type":"broad"},{"name":"NSLH1","type":"exact"},{"name":"Noonan syndrome-like disorder with loose anagen hair 1","type":"exact"},{"name":"Noonan syndrome-like with loose anagen hair 1","type":"exact"},{"name":"Tosti syndrome","type":"related"}],"termid":"MONDO:0054637","xrefs":{"Monarch":{"xref_id":"0054637"}}}


id: PBO:0078652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 5-1","termid":"PBO:0078652"}


id: GO:0050864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of B cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell activation","synonyms":[{"name":"regulation of B lymphocyte activation","type":"exact"},{"name":"regulation of B-cell activation","type":"exact"},{"name":"regulation of B-lymphocyte activation","type":"exact"}],"termid":"GO:0050864"}


id: PBO:0081618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 547","termid":"PBO:0081618"}


id: PBO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein BiP","termid":"PBO:0000823"}


id: PR:O74875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized heme-binding protein C330.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.03c","synonyms":[{"name":"Spom972h-SPCC330.03c","type":"exact"}],"termid":"PR:O74875"}


id: PBO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 61 pseudogene","termid":"PBO:0070147"}


id: PBO:0049990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2 pseudogene 1","termid":"PBO:0049990"}


id: MONDO:0017388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disease caused by compression of the celiac axis by an abnormally shaped arcuate ligament (the part of the diaphragm in which both pillars join in the midline around the aorta). Patients have recurrent abdominal pain, anorexia and weight loss. The pain is epigastric, and diarrhea or constipation may be present as well. Onset of pain will usually, although not always, be after food intake, and may be associated with nausea and emesis. Other symptoms may include lassitude, exercise intolerance and vomiting. Occasionally, a patient may show an abdominal murmur upon auscultation.","definition_xrefs":["Orphanet:293208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac trunk compression syndrome","secondary_identifiers":["GARD:12308","icd11.foundation:1666443751","NORD:1957"],"synonyms":[{"name":"Dunbar syndrome","type":"exact"},{"name":"Median Arcuate Ligament Syndrome","type":"exact"}],"termid":"MONDO:0017388","xrefs":{"Monarch":{"xref_id":"0017388"}}}


id: MONDO:0016460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyvalvular heart disease syndrome is a recently described syndrome characterized by the combination of polyvalvular heart disease, short stature, facial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:228410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"polyvalvular heart disease syndrome","secondary_identifiers":["SCTID:723448007","MEDGEN:1376905","UMLS:C4509918","GARD:20594"],"synonyms":[{"name":"PHD syndrome","type":"exact"}],"termid":"MONDO:0016460","xrefs":{"Monarch":{"xref_id":"0016460"}}}


id: MONDO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma that arises from the laryngeal epithelium. More than 90% of laryngeal carcinomas are squamous cell carcinomas. The remainder are adenoid cystic carcinomas, mucoepidermoid carcinomas and carcinomas with neuroendocrine differentiation.","definition_xrefs":["NCIT:C4855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal carcinoma","secondary_identifiers":["UMLS:C0595989","DOID:2600","MEDGEN:108889","SCTID:276975007"],"synonyms":[{"name":"cancer of larynx","type":"broad"},{"name":"cancer of the larynx","type":"broad"},{"name":"carcinoma of larynx","type":"exact"},{"name":"carcinoma of the larynx","type":"exact"},{"name":"laryngeal cancer","type":"broad"},{"name":"laryngeal carcinoma","type":"exact"},{"name":"laryngeal throat cancer","type":"broad"},{"name":"larynx carcinoma","type":"exact"}],"termid":"MONDO:0002358","xrefs":{"Monarch":{"xref_id":"0002358"}}}


id: PR:O94373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.07","synonyms":[{"name":"Spom972h-atp4","type":"exact"}],"termid":"PR:O94373"}


id: PBO:0088701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Mtr3","termid":"PBO:0088701"}


id: SO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript supported by EST and/or mRNA evidence that aligns unambiguously to the pseudogene locus; has retained intronic sequence compared to a reference transcript sequence.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_transcript_with_retained_intron","synonyms":[{"name":"pseudogene retained intron","type":"exact"}],"termid":"SO:0002115"}


id: PBO:0060871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member C/D","termid":"PBO:0060871"}


id: PBO:0030950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation","termid":"PBO:0030950"}


id: PBO:0058303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4677","termid":"PBO:0058303"}


id: PBO:0035738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methylation_during_vegetative_growth","termid":"PBO:0035738"}


id: MONDO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete variable age at onset electroclinical syndrome (obsolete MONDO:0000416)","termid":"MONDO:0000416","xrefs":{"Monarch":{"xref_id":"0000416"}}}


id: MONDO:0004998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chondromyxoid fibroma (obsolete MONDO:0004998)","termid":"MONDO:0004998","xrefs":{"Monarch":{"xref_id":"0004998"}}}


id: MONDO:0021160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cystitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal cystitis","secondary_identifiers":["icd11.foundation:638246732","UMLS:C0473230","MEDGEN:633096","SCTID:197848003"],"synonyms":[{"name":"Neisseria gonorrhoeae caused cystitis","type":"exact"},{"name":"Neisseria gonorrhoeae cystitis","type":"exact"}],"termid":"MONDO:0021160","xrefs":{"Monarch":{"xref_id":"0021160"}}}


id: MONDO:0017505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"apodia","termid":"MONDO:0017446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"apodia, bilateral","secondary_identifiers":["icd11.foundation:1292290082","UMLS:C0685440","Orphanet:295107","MEDGEN:672391"],"synonyms":[{"name":"congenital absence of foot, bilateral","type":"exact"}],"termid":"MONDO:0017505","xrefs":{"Monarch":{"xref_id":"0017505"}}}


id: MONDO:0012806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia and immune deficiency","termid":"MONDO:0010293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"ectodermal dysplasia and immunodeficiency 2","secondary_identifiers":["OMIM:612132","GARD:15542","DOID:0081079","MEDGEN:394295","MESH:C567411","NCIT:C176826","UMLS:C2677481"],"synonyms":[{"name":"EPAID2","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic, with T-cell immunodeficiency, autosomal dominant","type":"exact"}],"termid":"MONDO:0012806","xrefs":{"Monarch":{"xref_id":"0012806"}}}


id: GO:1990261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the unspliced pre-mRNA (pre-messenger RNA).","definition_xrefs":["PMID:22844259","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-mRNA catabolic process","synonyms":[{"name":"pre-mRNA decay","type":"exact"},{"name":"unspliced RNA decay","type":"exact"}],"termid":"GO:1990261"}


id: PBO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 33","termid":"PBO:0072156"}


id: GO:0090054
data:
  {"annotated_genes":["SJAG_00142","SJAG_02342","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94734,110729,91543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0090054","terms_by_termid":{"GO:0090055":null}}


id: PBO:0088422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25","termid":"PBO:0088422"}


id: GO:0033856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-D-xylulose 5-phosphate + 3-amino-2-oxopropyl phosphate = 2 H2O + H+ + phosphate + pyridoxine 5'-phosphate.","definition_xrefs":["RHEA:15265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"pyridoxine 5'-phosphate synthase activity","secondary_identifiers":["EC:2.6.99.2","KEGG_REACTION:R05838","MetaCyc:PDXJ-RXN"],"synonyms":[{"name":"1-deoxy-D-xylulose-5-phosphate:3-amino-2-oxopropyl phosphate 3-amino-2-oxopropyltransferase (phosphate-hydrolysing; cyclizing) activity","type":"related"},{"name":"PNP synthase activity","type":"related"},{"name":"pyridoxine 5-phosphate phospho lyase activity","type":"related"}],"termid":"GO:0033856"}


