# terms

id: MONDO:0008176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"Paget disease of bone 3","secondary_identifiers":["OMIM:167250","UMLS:C4085252","DOID:0081366","MEDGEN:895927"],"synonyms":[{"name":"PDB3","type":"related"},{"name":"Paget disease of bone 3","type":"exact"},{"name":"Paget disease of bone type 3","type":"exact"},{"name":"Paget disease of bone, familial","type":"related"},{"name":"familial Paget disease of bone","type":"related"}],"termid":"MONDO:0008176","xrefs":{"Monarch":{"xref_id":"0008176"}}}


id: PBO:0057906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3609","termid":"PBO:0057906"}


id: GO:0150014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the apical pole of a neuron, and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["PMID:9214543","GOC:aruk","PMID:20629984","GO:bc","PMID:1720142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical distal dendrite","termid":"GO:0150014"}


id: PBO:0078560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 48","termid":"PBO:0078560"}


id: PBO:0034816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D family exosome subunit Cti1","termid":"PBO:0034816"}


id: MONDO:0000571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD3zeta deficiency (obsolete MONDO:0000571)","termid":"MONDO:0000571","xrefs":{"Monarch":{"xref_id":"0000571"}}}


id: PBO:0054321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1713","termid":"PBO:0054321"}


id: GO:1904806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oxidation.","definition_xrefs":["PMID:22719267","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein oxidation","synonyms":[{"name":"regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904806"}


id: MONDO:0003623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic acinar cell adenocarcinoma (obsolete MONDO:0003623)","termid":"MONDO:0003623","xrefs":{"Monarch":{"xref_id":"0003623"}}}


id: MONDO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection induced by Pectobacterium carotovorum which is is a bacterium of the family Enterobacteriaceae. This bacterius is a ubiquitous plant pathogen with a wide host range (carrot, potato, tomato, leafy greens, squash and other cucurbits, onion, green peppers, African violets etc.), able to cause disease in almost any plant tissue it invades. It is a very economically important pathogen in terms of postharvest losses, and a common cause of decay in stored fruits and vegetables. Decay caused by E. carotovora is often simply referred to as \\\"bacterial soft rot\\\" (BSR) though this may also be caused by other bacteria. Most plants or plant parts can resist invasion by the bacteria, unless some type of wound is present. High humidity and temperatures around 30°C favor development of decay. Mutants can be produced which are less virulent. Virulence factors include: pectinases, cellulases, (which degrade plant cell walls), and also proteases, lipases, xylanases and nucleases (along with the normal virulence factors for pathogens – Fe acquisition, LPS integrity, multiple global regulatory systems).","definition_xrefs":["EFO:0000781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pectobacterium carotovorum infection","secondary_identifiers":["Wikipedia:Pectobacterium_carotovorum"],"synonyms":[{"name":"Pectobacterium caused disease or disorder","type":"exact"},{"name":"Pectobacterium disease or disorder","type":"exact"},{"name":"Pectobacterium infectious disease","type":"exact"}],"termid":"MONDO:0005122","xrefs":{"Monarch":{"xref_id":"0005122"}}}


id: FYPO:0005678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured in a cell is too low to detect. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"ubiquitinated protein absent from cell during vegetative growth","synonyms":[{"name":"ubiquitinated protein absent from cell during mitotic cell cycle","type":"related"},{"name":"ubiquitylated protein absent from cell during vegetative growth","type":"exact"},{"name":"undetectable cellular ubiquitinated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005678"}


id: MONDO:0023155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibula aplasia complex brachydactyly","termid":"MONDO:0023155","xrefs":{"Monarch":{"xref_id":"0023155"}}}


id: PBO:0072314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26","termid":"PBO:0072314"}


id: PBO:0048111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 1","termid":"PBO:0048111"}


id: MONDO:0007293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukocyte adhesion deficiency type I (LAD-I) is a form of LAD characterized by life-threatening, recurrent bacterial infections.","definition_xrefs":["Orphanet:99842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"leukocyte adhesion deficiency 1","secondary_identifiers":["OMIM:116920","MEDGEN:98310","NCIT:C4689","GARD:6893","SCTID:234582006","MESH:C535887","DOID:0110910","UMLS:C0398738"],"synonyms":[{"name":"ITGB2 leukocyte adhesion deficiency","type":"exact"},{"name":"LAD-I","type":"exact"},{"name":"LAD1","type":"exact"},{"name":"LFA 1 immunodeficiency","type":"related"},{"name":"LFA-I deficiency","type":"exact"},{"name":"LFA1 immunodeficiency","type":"exact"},{"name":"Lad1","type":"related"},{"name":"Lfa1 immunodeficiency","type":"related"},{"name":"lad","type":"related"},{"name":"lad 1","type":"related"},{"name":"lad-I","type":"exact"},{"name":"lad-type I","type":"exact"},{"name":"leukocyte adhesion deficiency","type":"broad"},{"name":"leukocyte adhesion deficiency 1","type":"exact"},{"name":"leukocyte adhesion deficiency caused by mutation in ITGB2","type":"exact"},{"name":"leukocyte adhesion deficiency type 1","type":"exact"},{"name":"leukocyte adhesion deficiency type I","type":"exact"},{"name":"leukocyte adhesion deficiency, type 1","type":"related"},{"name":"leukocyte adhesion deficiency, type I","type":"related"},{"name":"lymphocyte function-associated antigen 1 immunodeficiency","type":"exact"}],"termid":"MONDO:0007293","xrefs":{"Monarch":{"xref_id":"0007293"}}}


id: PBO:0058429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4799","termid":"PBO:0058429"}


id: PBO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 6, pseudogene","termid":"PBO:0050914"}


id: GO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The breakdown of host DNA, deoxyribonucleic acid, by a virus.","definition_xrefs":["GOC:bf","GOC:bm","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by virus of host DNA (obsolete GO:0039637)","termid":"GO:0039637"}


id: PBO:0079602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 F (putative)","termid":"PBO:0079602"}


id: PBO:0073804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 10, pseudogene","termid":"PBO:0073804"}


id: GO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell fate commitment","synonyms":[{"name":"glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0072149"}


id: GO:1905241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058","GOC:rph","PMID:19342382","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905241)","synonyms":[{"name":"activation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"activation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"up-regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"upregulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905241"}


id: PBO:0005763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf22","termid":"PBO:0005763"}


id: GO:0003992
data:
  {"annotated_genes":["SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62541],"is_not":false,"summary":null,"term":"GO:0003992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + N(2)-acetyl-L-ornithine = N-acetyl-L-glutamate 5-semialdehyde + L-glutamate.","definition_xrefs":["RHEA:18049","EC:2.6.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R02283","MetaCyc:ACETYLORNTRANSAM-RXN","GO:0047318"],"synonyms":[{"name":"2-N-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","type":"related"},{"name":"ACOAT activity","type":"related"},{"name":"N(2)-acetylornithine 5-transaminase activity","type":"related"},{"name":"N-acetylornithine aminotransferase activity","type":"related"},{"name":"N-acetylornithine-delta-transaminase activity","type":"related"},{"name":"N2-acetyl-L-ornithine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N2-acetylornithine 5-aminotransferase activity","type":"exact"},{"name":"N2-acetylornithine 5-transaminase activity","type":"related"},{"name":"acetylornithine 5-aminotransferase activity","type":"related"},{"name":"acetylornithine aminotransferase activity","type":"broad"},{"name":"acetylornithine delta-transaminase activity","type":"related"},{"name":"acetylornithine transaminase activity","type":"broad"},{"name":"succinylornithine aminotransferase activity","type":"broad"}],"termid":"GO:0003992","terms_by_termid":{"GO:0003992":null}}


id: PBO:0084104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein; involved in COPII vesicle formation; interacts with the Sec23p/Sec24p subcomplex; overexpression suppresses the temperature sensitivity of a myo2 mutant; similar to S. pombe Mpd2; SMY2 has a paralog, SYH1, that arose from the whole genome duplication","termid":"PBO:0084104"}


id: PBO:0085480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable mitochondrial seryl-tRNA synthetase; mutant displays increased invasive and pseudohyphal growth","termid":"PBO:0085480"}


id: PATO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000796 regeneration value (obsolete PATO:0000796)","termid":"PATO:0000796"}


id: PBO:0048544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided entry of tail-anchored proteins factor 4","termid":"PBO:0048544"}


id: PBO:0041080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 pseudogene 1","termid":"PBO:0041080"}


id: MONDO:0014613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pulmonary fibrosis and/or bone marrow failure, Telomere-related in which the cause of the disease is a mutation in the RTEL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005093"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","secondary_identifiers":["UMLS:C4225346","MEDGEN:901644","OMIM:616373","GARD:16098"],"synonyms":[{"name":"PFBMFT3","type":"related"},{"name":"RTEL1 pulmonary fibrosis and/or bone marrow failure, Telomere-related","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 3","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related caused by mutation in RTEL1","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 3","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 3","type":"exact"}],"termid":"MONDO:0014613","xrefs":{"Monarch":{"xref_id":"0014613"}}}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: GO:1903730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["PMID:22334681","PMID:24876385","GO_REF:0000059","PMID:25359770","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidate phosphatase activity (obsolete GO:1903730)","synonyms":[{"name":"regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903730"}


id: SO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of a mobile element when comparing a reference sequence (has mobile element) to a individual sequence (does not have mobile element).","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deletion","termid":"SO:0000159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_deletion","synonyms":[{"name":"mobile element deletion","type":"exact"}],"termid":"SO:0002066"}


id: PATO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the molecular attraction exerted between two atoms or compounds.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affinity","termid":"PATO:0002070"}


id: PBO:0086678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086678"}


id: PBO:0049082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137B","termid":"PBO:0049082"}


id: GO:1900871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent alteration within the chloroplast of one or more nucleotides within an mRNA to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:TermGenie","PMID:1653905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"},{"relation_name":"is_a","term_name":"chloroplast RNA modification","termid":"GO:1900865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"chloroplast mRNA modification","synonyms":[{"name":"chloroplast mRNA editing","type":"narrow"},{"name":"mRNA editing in chloroplast","type":"narrow"}],"termid":"GO:1900871"}


id: PBO:0113190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysolipid acyltransferase; involved in the synthesis of phosphatidic acid from 1-acyl-2-hydroxy-sn-glycero-3-phosphate using oleoyl-CoA as acyl donor and in phospholipid remodeling, incorporating palmitic acid into the sn-1 position of phosphatidylserine and phosphatidylethanolamine; localizes to ER membranes associated with mitochondria (MAMs); contains three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase","termid":"PBO:0113190"}


id: PR:Q92348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug183 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 183 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.03c","synonyms":[{"name":"Spom972h-mug183","type":"exact"}],"termid":"PR:Q92348"}


id: PBO:0038334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exacerbates_condition","termid":"PBO:0038334"}


id: MONDO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chordoid glioma (obsolete MONDO:0002774)","termid":"MONDO:0002774","xrefs":{"Monarch":{"xref_id":"0002774"}}}


id: MONDO:0007381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epithelial recurrent erosion dystrophy (ERED) is a rare form of superficial corneal dystrophy characterized by recurrent episodes of epithelial erosions from childhood in the absence of associated diseases, with occasional impairment of vision.","definition_xrefs":["Orphanet:293381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial recurrent erosion dystrophy","secondary_identifiers":["OMIM:122400","SCTID:715908008","DOID:0070337","MEDGEN:342263","MESH:C565155","GARD:17338","icd11.foundation:1105690299","UMLS:C1852551"],"synonyms":[{"name":"ERED","type":"exact"},{"name":"corneal erosions, recurring hereditary","type":"related"},{"name":"dystrophia Helsinglandica","type":"exact"},{"name":"dystrophia Smolandiensis","type":"exact"},{"name":"epithelial recurrent erosion dystrophy","type":"exact"},{"name":"recurrent hereditary corneal erosions","type":"exact"}],"termid":"MONDO:0007381","xrefs":{"Monarch":{"xref_id":"0007381"}}}


id: FYPO:0002489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a spore lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"spore lysis","synonyms":[{"name":"inviable, lysed spore","type":"exact"},{"name":"spore cytolysis","type":"exact"}],"termid":"FYPO:0002489"}


id: PBO:0063856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P38 inhibited cutaneous squamous cell carcinoma associated lincRNA","termid":"PBO:0063856"}


id: PR:P10989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- act1 gene.","definition_xrefs":["UniProtKB:P10989","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.12c","synonyms":[{"name":"Spom972h-act1","type":"exact"}],"termid":"PR:P10989"}


id: PBO:0052669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 37","termid":"PBO:0052669"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: PBO:0077035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 3","termid":"PBO:0077035"}


id: PATO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000113 radiation sensitivity (obsolete PATO:0000113)","termid":"PATO:0000113"}


id: MONDO:0009840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partington-Anderson syndrome","secondary_identifiers":["MESH:C536299","UMLS:C1850075","OMIM:260555","MEDGEN:376699","Orphanet:2829"],"synonyms":[{"name":"Partington-Anderson syndrome","type":"exact"}],"termid":"MONDO:0009840","xrefs":{"Monarch":{"xref_id":"0009840"}}}


id: GO:0018065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a cofactor to a protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-cofactor linkage (obsolete GO:0018065)","termid":"GO:0018065"}


id: GO:0097627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ornithine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine transmembrane transporter activity","termid":"GO:0000064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity L-ornithine transmembrane transporter activity","synonyms":[{"name":"high affinity L-ornithine transmembrane transporter activity","type":"exact"}],"termid":"GO:0097627"}


id: MOD:01594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-113 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01594"}


id: GO:0032573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phylloquinone (vitamin K1) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin K","termid":"GO:0032571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phylloquinone","synonyms":[{"name":"response to vitamin K1","type":"exact"}],"termid":"GO:0032573"}


id: PBO:0059552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ser (AGU/C) 2","termid":"PBO:0059552"}


id: GO:0044394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by the addition of a malonyl (CO-CH2-CO) group.","definition_xrefs":["GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein malonylation","termid":"GO:0044394"}


id: PBO:0061352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 10","termid":"PBO:0061352"}


id: MONDO:0031077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 76","secondary_identifiers":["MEDGEN:1824009","DOID:0070575","OMIM:620084","UMLS:C5774236"],"synonyms":[{"name":"SPGF76","type":"exact"},{"name":"spermatogenic failure 76","type":"exact"}],"termid":"MONDO:0031077","xrefs":{"Monarch":{"xref_id":"0031077"}}}


id: MONDO:0017575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of gastrointestinal dysmotility, peripheral neuropathy, chronic progressive external ophthalmoplegia and leukoencephalopathy.","definition_xrefs":["Orphanet:298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0019254","MONDO:0004069","MONDO:0002320","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"mitochondrial neurogastrointestinal encephalomyopathy","secondary_identifiers":["NORD:1449","SCTID:718214007","UMLS:C0872218","NCIT:C119678","MEDGEN:167876","MESH:C537477","GARD:9920"],"synonyms":[{"name":"MNGIE","type":"exact"},{"name":"MNGIE syndrome","type":"related"},{"name":"Mitochondrial Neurogastrointestinal Encephalopathy","type":"exact"},{"name":"Mitochondrial neurogastrointestinal encephalopathy","type":"exact"},{"name":"OGIMD","type":"related"},{"name":"POLIP","type":"related"},{"name":"mitochondrial Neurogastrointestingal encephalopathy","type":"exact"},{"name":"mitochondrial neurogastrointestinal encephalopathy syndrome","type":"related"},{"name":"myoneurogastrointestinal encephalopathy syndrome","type":"related"},{"name":"oculogastrointestinal muscular dystrophy","type":"related"},{"name":"polyneuropathy, ophthalmoplegia, leukoencephalopathy, and intestinal pseudo-obstruction","type":"related"},{"name":"thymidine phosphorylase deficiency","type":"related"}],"termid":"MONDO:0017575","xrefs":{"Monarch":{"xref_id":"0017575"}}}


id: GO:1903969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:nc","PMID:19100238","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"regulation of response to M-CSF","type":"exact"},{"name":"regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903969"}


id: GO:0097063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of cadmium (Cd++).","definition_xrefs":["GOC:rs","PMID:19456862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"cadmium ion sensor activity","termid":"GO:0097063"}


id: PBO:0084669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aldehyde dehydrogenase; required for growth on ethanol and conversion of acetaldehyde to acetate; phosphorylated; activity is K+ dependent; utilizes NADP+ or NAD+ equally as coenzymes; expression is glucose repressed; can substitute for cytosolic NADP-dependent aldehyde dehydrogenase when directed to the cytosol; human homolog ALDH2 can complement yeast ald4 mutant","termid":"PBO:0084669"}


id: GO:0002923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"regulates","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"}


id: PBO:0078435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-5","termid":"PBO:0078435"}


id: MONDO:0016753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign schwannoma (obsolete MONDO:0016753)","termid":"MONDO:0016753","xrefs":{"Monarch":{"xref_id":"0016753"}}}


id: PBO:0067746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 45","termid":"PBO:0067746"}


id: PBO:0083464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MET4/YNL104C","termid":"PBO:0083464"}


id: PBO:0004188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex B box binding subunit Sfc3","termid":"PBO:0004188"}


id: PBO:0064407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 2","termid":"PBO:0064407"}


id: GO:1900737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900736"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"down regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"down-regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down-regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down-regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down-regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down-regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"downregulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"downregulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"downregulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"downregulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"downregulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"inhibition of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"inhibition of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"inhibition of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"inhibition of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"negative regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"negative regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"negative regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"negative regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"negative regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:1900737"}


id: PBO:0075105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 154","termid":"PBO:0075105"}


id: MONDO:0020043
data:
  {"annotated_genes":["SJAG_04641","SJAG_01945","SJAG_05212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[85529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[85384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_04641":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive congenital cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681519","MEDGEN:1843070","GARD:19412","Orphanet:98095"],"termid":"MONDO:0020043","terms_by_termid":{"MONDO:0008943":null,"MONDO:0014104":null,"MONDO:0014503":null},"xrefs":{"Monarch":{"xref_id":"0020043"}}}


id: PBO:0017560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase Tcd1 (predicted)","termid":"PBO:0017560"}


id: PBO:0051995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional adhesion molecule 3","termid":"PBO:0051995"}


id: MONDO:1011462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, domestic cat","secondary_identifiers":["OMIA:000033-9685"],"termid":"MONDO:1011462","xrefs":{"Monarch":{"xref_id":"1011462"}}}


id: MOD:01150
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a nedd8 protein.","definition_xrefs":["PubMed:18688235","PubMed:12612601","PubMed:11125103"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"neddylated lysine","termid":"MOD:01150"}


id: GO:0016862
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050163"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is a keto- or an enol-group, are the same molecule, and no oxidized product appears.","definition_xrefs":["EC:5.3.2.-","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, interconverting keto- and enol-groups","type":"exact"}],"termid":"GO:0016862","terms_by_termid":{"GO:0050163":null}}


id: MONDO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common sexually transmitted bacterial infection caused by Neisseria gonorrhoeae. It is transmitted through vaginal, oral, or anal intercourse. Infected individuals may be asymptomatic. Symptoms in males include burning sensation during urination, discharge from the penis, and painful swelling of the testes. Symptoms in females include painful urination, vaginal discharge, and vaginal bleeding between periods. If untreated, the infection may lead to pelvic inflammatory disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"bacterial sexually transmitted disease","termid":"MONDO:0005323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonorrhea","secondary_identifiers":["Orphanet:100642","DOID:7551","ICD9:098.89","ICD9:098","NCIT:C92950","UMLS:C0018081","MESH:D006069","ICD9:098.2","ICD9:098.32","SCTID:15628003","MEDGEN:9077"],"synonyms":[{"name":"Crosti-gianotti syndrome","type":"related"},{"name":"GC","type":"exact"},{"name":"Gianotti Crosti syndrome","type":"related"},{"name":"Neisseria gonorrhoeae infection","type":"exact"},{"name":"PAC","type":"related"},{"name":"PAS","type":"related"},{"name":"acrodermatitis, infantile lichenoid","type":"related"},{"name":"acrodermatitis, papular infantile","type":"related"},{"name":"chronic gonococcal infectious disease of lower genitourinary tract","type":"exact"},{"name":"chronic gonococcal infectious disease of upper genitourinary tract","type":"exact"},{"name":"infections, Neisseria gonorrhoeae","type":"related"},{"name":"papular acrodermatitis of childhood","type":"related"}],"termid":"MONDO:0004277","xrefs":{"Monarch":{"xref_id":"0004277"}}}


id: GO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6,7,8-tetrahydromethanopterin + N-formylmethanofuran + H+ = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + methanofuran.","definition_xrefs":["RHEA:18061","EC:2.3.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.101-RXN","GO:0018714","UM-BBD_reactionID:r0346","KEGG_REACTION:R03390"],"synonyms":[{"name":"FTR","type":"related"},{"name":"N-formylmethanofuran(CHO-MFR):tetrahydromethanopterin(H4MPT) formyltransferase activity","type":"related"},{"name":"formylmethanofuran-tetrahydromethanopterin formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin 5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin N5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:tetrahydromethanopterin formyltransferase activity","type":"related"}],"termid":"GO:0030270"}


id: PBO:0055031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2446","termid":"PBO:0055031"}


id: GO:0046592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative degradation or interconversion of polyamines.","definition_xrefs":["PMID:1567380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyamine oxidase activity","synonyms":[{"name":"1-N-acetylspermidine:oxygen oxidoreductase (deaminating)","type":"narrow"},{"name":"N1-acetylspermidine:oxygen oxidoreductase (deaminating)","type":"narrow"}],"termid":"GO:0046592"}


id: PBO:0065429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 2","termid":"PBO:0065429"}


id: FYPO:0004196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated, has more than one septum and a nucleus that is broken into multiple small fragments, and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"},{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, elongated multiseptate cell","termid":"FYPO:0004076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0002403"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, elongated multiseptate cell with fragmented nucleus","synonyms":[{"name":"inviable after spore germination, single or double cell division, elongated multiseptate cell with fragmented nuclear DNA","type":"related"},{"name":"inviable following spore germination, single or double cell division, elongated multiseptate cell with fragmented nucleus","type":"exact"},{"name":"inviable germinated spore, single or double cell division, elongated multiseptate cell with fragmented nucleus","type":"exact"},{"name":"lethal after spore germination, single or double cell division, elongated multiseptate cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004196"}


id: PBO:0109816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf2","termid":"PBO:0109816"}


id: PBO:0043124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 2","termid":"PBO:0043124"}


id: GO:0070913
data:
  {"annotated_genes":["SJAG_01480","SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88710,91221],"is_not":false,"summary":null,"term":"GO:0070913"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that is involved in transcription-coupled repair. The subunits are known as Ddb1 and Wdr21 in S. pombe; Ddb1 contains a motif called the DDB-box that interacts with adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01480":null,"SJAG_03454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Ddb1-Wdr21 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070913","terms_by_termid":{"GO:0070913":null}}


id: PBO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_alkalinity","termid":"PBO:0031498"}


id: PBO:0028322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitochondrion","termid":"PBO:0028322"}


id: SO:1001187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is alternatively spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"alternatively_spliced","termid":"SO:0000877"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternatively_spliced_transcript","synonyms":[{"name":"alternatively spliced transcript","type":"exact"}],"termid":"SO:1001187"}


id: PBO:0073818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 19","termid":"PBO:0073818"}


id: GO:0035325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like protein, a pattern recognition receptor that binds pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:19076341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Toll-like receptor binding","synonyms":[{"name":"TLR binding","type":"exact"}],"termid":"GO:0035325"}


id: PBO:0049507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 14","termid":"PBO:0049507"}


id: PBO:0014237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase","termid":"PBO:0014237"}


id: PBO:0068852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 90, pseudogene","termid":"PBO:0068852"}


id: MONDO:0012574
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85916],"is_not":false,"summary":null,"term":"MONDO:0012574"}]},"cv_name":"mondo","definition":"17p11.2 microduplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 17, typically characterized by hypotonia, poor feeding, failure to thrive, developmental delay (particularly cognitive and language deficits), mild-moderate intellectual deficit, and neuropsychiatric disorders (behavioral problems, anxiety, attention deficit hyperactivity disorder, autistic spectrum disorder, bipolar disorder). Structural cardiovascular anomalies (dilated aortic root, bicommissural aortic valve, atrial/ventricular and septal defects) and sleep disturbance (obstructive and central sleep apnea) are also frequently associated.","definition_xrefs":["Orphanet:1713"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 17","termid":"MONDO:0016950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"Potocki-Lupski syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060853","NCIT:C124846","OMIM:610883","SCTID:734016004","UMLS:C2931246","DECIPHER:19","GARD:10145","icd11.foundation:1720095972","MEDGEN:444010"],"synonyms":[{"name":"17p11.2 Duplication syndrome","type":"exact"},{"name":"17p11.2 microduplication syndrome","type":"exact"},{"name":"Duplication 17p11.2 syndrome","type":"related"},{"name":"PTLS","type":"related"},{"name":"Potocki-Lupski syndrome","type":"exact"},{"name":"Potocki-Lupski syndrome (dup(17)(p11.2p11.2))","type":"related"},{"name":"Potocki-Lupski syndrome, Isolated cases","type":"exact"},{"name":"chromosome 17P11.2 Duplication syndrome","type":"related"},{"name":"chromosome 17p11.2 duplication syndrome","type":"exact"},{"name":"trisomy 17p11.2","type":"exact"}],"termid":"MONDO:0012574","terms_by_termid":{"MONDO:0012574":null},"xrefs":{"Monarch":{"xref_id":"0012574"}}}


id: MONDO:0012982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 6 (EA6) is an exceedingly rare form of hereditary episodic ataxia with varying degrees of ataxia and associated findings including slurred speech, headache, confusion and hemiplegia.","definition_xrefs":["Orphanet:209967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"episodic ataxia type 6","secondary_identifiers":["SCTID:718753002","OMIM:612656","DOID:0050994","icd11.foundation:1493336901","GARD:17107","MEDGEN:390739","MESH:C567207","UMLS:C2675211"],"synonyms":[{"name":"EA6","type":"related"},{"name":"SLC1A3 hereditary episodic ataxia","type":"exact"},{"name":"episodic ataxia type 6","type":"exact"},{"name":"episodic ataxia, type 6","type":"related"},{"name":"hereditary episodic ataxia caused by mutation in SLC1A3","type":"exact"}],"termid":"MONDO:0012982","xrefs":{"Monarch":{"xref_id":"0012982"}}}


id: GO:0044569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microbial enzyme complex which contains nickel and iron in its active site. In Acetomicrobium flavidum it is an alpha 2 beta 2 tetramer.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:8936309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"[Ni-Fe] hydrogenase complex","synonyms":[{"name":"Ni-Fe hydrogenase complex","type":"exact"},{"name":"nickel-iron hydrogenase complex","type":"exact"}],"termid":"GO:0044569"}


id: MONDO:0024334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"peripheral nerve lesion","secondary_identifiers":["MEDGEN:1843468","UMLS:C1963788"],"termid":"MONDO:0024334","xrefs":{"Monarch":{"xref_id":"0024334"}}}


id: MONDO:0011415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the SPATA7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 3","secondary_identifiers":["GARD:9661","ICD10CM:H35.5","MESH:C565814","OMIM:604232","DOID:0110331","MEDGEN:346964","UMLS:C1858677"],"synonyms":[{"name":"LCA3","type":"exact"},{"name":"Leber congenital amaurosis 3","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in SPATA7","type":"exact"},{"name":"Leber congenital amaurosis type 3","type":"exact"},{"name":"SPATA7 Leber congenital amaurosis","type":"exact"},{"name":"amaurosis congenita of Leber, type 3","type":"related"},{"name":"retinitis pigmentosa, juvenile, Spata7-related","type":"related"},{"name":"retinitis pigmentosa, juvenile, autosomal recessive","type":"exact"}],"termid":"MONDO:0011415","xrefs":{"Monarch":{"xref_id":"0011415"}}}


id: FYPO:0000162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to stress","termid":"FYPO:0000162"}


id: GO:0034738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + lanosterol = CoA + lanosterol ester.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol O-acyltransferase activity","termid":"GO:0004772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lanosterol O-acyltransferase activity","termid":"GO:0034738"}


id: GO:0000262
data:
  {"annotated_genes":["SJAG_00611","SJAG_01262","SJAG_03780","SJAG_00153","SJAG_03906","SJAG_01807","SJAG_MIT05","SJAG_03068","SJAG_MIT07","SJAG_MIT06"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63899,88943,99659,103238,103257,106312,112898,119429,119437,119438],"is_not":false,"summary":null,"term":"GO:0000262"}]},"cv_name":"cellular_component","definition":"A chromosome found in the mitochondrion of a eukaryotic cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"mitochondrial nucleoid","termid":"GO:0042645"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01807":null,"SJAG_03068":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005694","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial chromosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1186327184"],"synonyms":[{"name":"mitochondrial DNA","type":"narrow"},{"name":"mitochondrial genome","type":"related"},{"name":"mtDNA","type":"narrow"}],"termid":"GO:0000262","terms_by_termid":{"GO:0000262":null}}


id: FYPO:0001700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to the receptor agonist GW 7647. Cells stop growing (and may die) at a concentration of GW 7647 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to GW 7647","synonyms":[{"name":"hypersensitive to GW 7647","type":"exact"},{"name":"sensitive to GW 7647 during mitotic cell cycle","type":"related"},{"name":"sensitive to GW 7647 during vegetative growth","type":"exact"}],"termid":"FYPO:0001700"}


id: PBO:0045635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 47 (pseudogene)","termid":"PBO:0045635"}


id: MONDO:1010607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exocrine pancreatic insufficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic insufficiency, non-human animal","termid":"MONDO:1010058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocrine pancreatic insufficiency, dog","secondary_identifiers":["OMIA:000765-9615"],"termid":"MONDO:1010607","xrefs":{"Monarch":{"xref_id":"1010607"}}}


id: GO:0033307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that generates phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol, from derivatives of it without de novo synthesis.","definition_xrefs":["MetaCyc:PWY-5107","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytol biosynthetic process","termid":"GO:0033520"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytol salvage","synonyms":[{"name":"phytol salvage pathway","type":"exact"}],"termid":"GO:0033307"}


id: PBO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 70","termid":"PBO:0042856"}


id: MONDO:0024356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central sleep apnea syndrome","termid":"MONDO:0004731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary central sleep apnea syndrome","secondary_identifiers":["ICD10CM:G47.31","ICD9:327.21","MEDGEN:148385","SCTID:9741000119101","UMLS:C0751762"],"synonyms":[{"name":"primary central sleep apnea","type":"exact"}],"termid":"MONDO:0024356","xrefs":{"Monarch":{"xref_id":"0024356"}}}


id: PR:O13710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19306:SF1","PRO:DNx","OMA:SCHPO02171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.02c","secondary_identifiers":["UniProtKB:O13710"],"synonyms":[{"name":"DNA repair protein spr18 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SMC partner of rad18 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SMC5","type":"exact"}],"termid":"PR:O13710"}


id: PBO:0055045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2460","termid":"PBO:0055045"}


id: GO:0004251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidase activity (obsolete GO:0004251)","synonyms":[{"name":"X-Pro dipeptidase activity","type":"exact"},{"name":"Xaa-Pro dipeptidase activity","type":"exact"}],"termid":"GO:0004251"}


id: MONDO:0013620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the SCN4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"},{"relation_name":"is_a","term_name":"SCN4A-related myopathy, autosomal recessive","termid":"MONDO:0100121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital myasthenic syndrome 16","secondary_identifiers":["UMLS:C3280112","OMIM:614198","MEDGEN:481742","DOID:0110682","GARD:15771"],"synonyms":[{"name":"CMS16","type":"exact"},{"name":"SCN4A congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome acetazolamide-responsive","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in SCN4A","type":"exact"},{"name":"congenital myasthenic syndrome type 16","type":"exact"},{"name":"myasthenic syndrome, congenital, 16","type":"related"},{"name":"myasthenic syndrome, congenital, Acetazolamide-responsive","type":"related"},{"name":"myasthenic syndrome, congenital, type 16","type":"exact"}],"termid":"MONDO:0013620","xrefs":{"Monarch":{"xref_id":"0013620"}}}


id: GO:0010409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving extensins, a group of 60-90 kDNA hydroxyproline (Hyp)-rich glycoproteins whose polypeptide backbone consists of many repeats of structural Ser(Hyp)4-6 motifs, with heavily glycosylated 1-4 arabinose residues O-linked to contiguous stretches of Hyp residues, with most of the Ser residues being O-galactosylated.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall hydroxyproline-rich glycoprotein metabolic process","termid":"GO:0010404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"extensin metabolic process","synonyms":[{"name":"extensin metabolism","type":"exact"}],"termid":"GO:0010409"}


id: PBO:0055478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2911","termid":"PBO:0055478"}


id: PBO:0070546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 12","termid":"PBO:0070546"}


id: PBO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: MONDO:0014515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy with central cone involvement","secondary_identifiers":["OMIM:616170","UMLS:C4015371","MEDGEN:863808"],"synonyms":[{"name":"CCMD","type":"related"},{"name":"macular dystrophy with central cone involvement","type":"exact"}],"termid":"MONDO:0014515","xrefs":{"Monarch":{"xref_id":"0014515"}}}


id: PBO:0057779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2681","termid":"PBO:0057779"}


id: GO:0035387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Roundabout signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Roundabout signaling pathway","termid":"GO:0035386"},{"relation_name":"negatively_regulates","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Roundabout signaling pathway","synonyms":[{"name":"negative regulation of Roundabout signalling pathway","type":"exact"}],"termid":"GO:0035387"}


id: PBO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine/uridine monophosphate kinase 1","termid":"PBO:0043401"}


id: PBO:0028439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_papuamide_B_during_mating","termid":"PBO:0028439"}


id: PBO:0054693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2102","termid":"PBO:0054693"}


id: GO:0140949
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63106],"is_not":false,"summary":null,"term":"GO:0140949"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"histone H3K9 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.1.355"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140949","terms_by_termid":{"GO:0140949":null}}


id: MONDO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the cecal mucosa. It is characterized by a villous architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C5520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"},{"relation_name":"is_a","term_name":"villous adenoma of colon","termid":"MONDO:0021271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cecum villous adenoma","secondary_identifiers":["UMLS:C1332869","DOID:0050910","MEDGEN:272438","EFO:1000155"],"synonyms":[{"name":"caecum adenoma","type":"related"},{"name":"caecum villous adenoma","type":"exact"},{"name":"cecal villous adenoma","type":"exact"},{"name":"cecum adenoma","type":"broad"},{"name":"cecum villous adenoma","type":"exact"},{"name":"villous adenoma of cecum","type":"exact"},{"name":"villous adenoma of the cecum","type":"exact"}],"termid":"MONDO:0000525","xrefs":{"Monarch":{"xref_id":"0000525"}}}


id: PBO:0038745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4","termid":"PBO:0038745"}


id: MONDO:1011401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 diabetes mellitus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000283"],"termid":"MONDO:1011401","xrefs":{"Monarch":{"xref_id":"1011401"}}}


id: PBO:0055933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 39","termid":"PBO:0055933"}


id: PBO:0057798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3120","termid":"PBO:0057798"}


id: PBO:0049877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hephaestin","termid":"PBO:0049877"}


id: PBO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase 2","termid":"PBO:0061159"}


id: MONDO:1010912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, domestic cat","secondary_identifiers":["OMIA:000679-9685"],"termid":"MONDO:1010912","xrefs":{"Monarch":{"xref_id":"1010912"}}}


id: PBO:0090592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho843","termid":"PBO:0090592"}


id: MONDO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of behavior based on the pervasive belief that the motives of others are malevolent and that they should not be trusted.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranoid personality disorder","secondary_identifiers":["DOID:10938","ICD9:301.0","ICD10CM:F60.0","icd11.foundation:1066693864","MESH:D010260","UMLS:C0030477","NCIT:C92630","SCTID:13601005","MEDGEN:45321"],"termid":"MONDO:0001163","xrefs":{"Monarch":{"xref_id":"0001163"}}}


id: GO:0047157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [myelin proteolipid] + palmityl-CoA = [myelin proteolipid] O-palmitoylprotein + CoA.","definition_xrefs":["PMID:3818589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"myelin-proteolipid O-palmitoyltransferase activity","secondary_identifiers":["EC:2.3.1.100","MetaCyc:2.3.1.100-RXN"],"synonyms":[{"name":"[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"},{"name":"acyl-protein synthase activity","type":"broad"},{"name":"myelin PLP acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"}],"termid":"GO:0047157"}


id: PBQ:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1. IIn some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cellular quiescence following G1 arrest","type":"exact"},{"name":"quiescence following G1 arrest","type":"broad"}],"termid":"PBQ:0000002"}


id: PBO:0044860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEK proto-oncogene","termid":"PBO:0044860"}


id: PBO:0082879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin; structural protein of SCF complexes (which also contain Skp1p, Cdc34p, Hrt1p and an F-box protein) involved in ubiquitination; SCF promotes the G1-S transition by targeting G1 cyclins and the Cln-CDK inhibitor Sic1p for degradation; human homolog CUL1 can complement yeast cdc53 null mutant","termid":"PBO:0082879"}


id: PBO:0067718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 16","termid":"PBO:0067718"}


id: PBO:0069820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1106, pseudogene","termid":"PBO:0069820"}


id: GO:0004714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["EC:2.7.10.1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activity","termid":"GO:0004713"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0038023","GO:0016301","GO:0004672","GO:0016740","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase activity","secondary_identifiers":["Reactome:R-HSA-74742","Reactome:R-HSA-177930","Reactome:R-HSA-8950485","Reactome:R-HSA-8950537","Reactome:R-HSA-8950364","Reactome:R-HSA-74711","Reactome:R-HSA-8987042","Reactome:R-HSA-8987255","Reactome:R-HSA-8950423","Reactome:R-HSA-6784324","Reactome:R-HSA-8987096","Reactome:R-HSA-8950405","Reactome:R-HSA-8983309","Reactome:R-HSA-8853792","Reactome:R-HSA-8986985","Reactome:R-HSA-8987150","Reactome:R-HSA-167019","Reactome:R-HSA-8950269","Reactome:R-HSA-8986995","Reactome:R-HSA-8983371","Reactome:R-HSA-198295","Reactome:R-HSA-8950757","Reactome:R-HSA-8987012","Reactome:R-HSA-167683","Reactome:R-HSA-8986994","Reactome:R-HSA-8950340","Reactome:R-HSA-8987129","Reactome:R-HSA-169905","Reactome:R-HSA-8983300","Reactome:R-HSA-8987141","Reactome:R-HSA-8987202","Reactome:R-HSA-177933","Reactome:R-HSA-8950591","Reactome:R-HSA-166544","Reactome:R-HSA-8983424","Reactome:R-HSA-8987070","Reactome:R-HSA-8987084","Reactome:R-HSA-8950354","Reactome:R-HSA-8987179","Reactome:R-HSA-8950453","Reactome:R-HSA-8987040","Reactome:R-HSA-8982163","Reactome:R-HSA-8852552"],"synonyms":[{"name":"receptor protein tyrosine kinase activity","type":"related"},{"name":"receptor protein-tyrosine kinase activity","type":"related"}],"termid":"GO:0004714"}


id: PBO:0042235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 7 (pseudogene)","termid":"PBO:0042235"}


id: PBO:0075052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-15","termid":"PBO:0075052"}


id: PBO:0031460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cadmium","termid":"PBO:0031460"}


id: PBO:0044212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin W","termid":"PBO:0044212"}


id: PBO:0090646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Slx9","termid":"PBO:0090646"}


id: PR:O59680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c1, heme protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10266:SF2","PRO:DNx","OMA:SCHPO03118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1, heme protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.18","secondary_identifiers":["UniProtKB:O59680"],"synonyms":[{"name":"Spom972h-CYC1","type":"exact"},{"name":"complex III subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"complex III subunit IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome b-c1 complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome c-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59680"}


id: PBO:0028189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell,_normal_cell_length","termid":"PBO:0028189"}


id: GO:2000425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of apoptotic cell clearance","synonyms":[{"name":"regulation of apoptotic cell removal","type":"exact"},{"name":"regulation of efferocytosis","type":"exact"},{"name":"regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000425"}


id: MONDO:1011766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"warts between hooves, non-human animal","secondary_identifiers":["OMIA:001060"],"termid":"MONDO:1011766","xrefs":{"Monarch":{"xref_id":"1011766"}}}


id: MONDO:0014744
data:
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id: GO:0140357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"heme export from vacuole to cytoplasm","termid":"GO:0140357"}


id: PBO:0091151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Vph2/Vma12","termid":"PBO:0091151"}


id: GO:1900190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-species biofilm formation","termid":"GO:1900190"}


id: PBO:0001645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thioredoxin Trx1","termid":"PBO:0001645"}


id: GO:0016915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A nonsteroidal regulator, composed of two covalently linked beta subunits, that is synthesized in the pituitary gland and gonads and stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["ISBN:0198506732","ISBN:0721662544"],"gene_count":0,"genotype_count":0,"name":"obsolete activin (obsolete GO:0016915)","synonyms":[{"name":"activin","type":"exact"}],"termid":"GO:0016915"}


id: PBO:0030060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0030060"}


id: PBO:0078833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 2-1","termid":"PBO:0078833"}


id: PBO:0069358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 618, pseudogene","termid":"PBO:0069358"}


id: PBO:0067659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 836, pseudogene","termid":"PBO:0067659"}


id: PR:Q9UTI9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC15E1.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTI9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0591 membrane protein C15E1.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.02c","synonyms":[{"name":"Spom972h-SPAC15E1.02c","type":"exact"}],"termid":"PR:Q9UTI9"}


id: MONDO:1010590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, sheep","termid":"MONDO:1010606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, sheep","secondary_identifiers":["OMIA:000424-9940"],"termid":"MONDO:1010590","xrefs":{"Monarch":{"xref_id":"1010590"}}}


id: GO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic metabolic process","synonyms":[{"name":"antibiotic metabolism","type":"exact"}],"termid":"GO:0016999"}


id: GO:0016259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving selenocysteine, an essential component of glutathione peroxidase and some other proteins.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"selenocysteine metabolic process","secondary_identifiers":["Reactome:R-HSA-2408522"],"synonyms":[{"name":"selenocysteine metabolism","type":"exact"}],"termid":"GO:0016259"}


id: PBO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SRP-dependent_cotranslational_protein_targeting_to_membrane_during_vegetative_growth","termid":"PBO:0036040"}


id: PBO:0088110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar amino acid transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088110"}


id: PBO:0073141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B4, pseudogene","termid":"PBO:0073141"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: PBO:0041358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 1","termid":"PBO:0041358"}


id: MONDO:0017409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection with the Cytomegalovirus that is present from birth.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal cytomegalovirus syndrome","secondary_identifiers":["GARD:1480","UMLS:C0349499","MEDGEN:578789","NANDO:2200891","NCIT:C122427","SCTID:276701009","icd11.foundation:1515465998","Orphanet:294"],"synonyms":[{"name":"CMV antenatal infection","type":"related"},{"name":"antenatal CMV infection","type":"exact"},{"name":"antenatal cytomegalovirus infection","type":"exact"},{"name":"congenital Cytomegaloviral infection","type":"exact"},{"name":"congenital cytomegalovirus","type":"related"},{"name":"mother-to-child transmission of cytomegalovirus syndrome","type":"exact"}],"termid":"MONDO:0017409","xrefs":{"Monarch":{"xref_id":"0017409"}}}


id: MONDO:0017556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Madelung deformity","termid":"MONDO:0018154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Madelung deformity, unilateral","secondary_identifiers":["icd11.foundation:1964514438","Orphanet:295221"],"termid":"MONDO:0017556","xrefs":{"Monarch":{"xref_id":"0017556"}}}


id: GO:0036065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a fucosyl group to an acceptor molecule.","definition_xrefs":["PMID:19948734","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fucosylation","termid":"GO:0036065"}


id: FYPO:0008040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in a cell is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4,5-bisphosphate level","synonyms":[{"name":"increased phosphatidylinositol-4,5-bisphosphate level in cell","type":"exact"}],"termid":"FYPO:0008040"}


id: PBO:0039317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALMS1 intronic transcript 1","termid":"PBO:0039317"}


id: GO:0021558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trochlear nerve over time, from its formation to the mature structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve development","synonyms":[{"name":"CN IV development","type":"related"},{"name":"cranial nerve 4 development","type":"exact"},{"name":"cranial nerve IV development","type":"exact"}],"termid":"GO:0021558"}


id: FYPO:0000818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of M-factor in growth medium","synonyms":[{"name":"increased accumulation of M-factor in growth medium","type":"related"},{"name":"increased level of M-factor in growth medium","type":"exact"},{"name":"increased release of M-factor into growth medium","type":"related"}],"termid":"FYPO:0000818"}


id: PBO:0070335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 7","termid":"PBO:0070335"}


id: PBO:0026872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0026872"}


id: PR:P0CT69
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2002 gene.","definition_xrefs":["UniProtKB:P0CT69","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.04","synonyms":[{"name":"Spom972h-rpl2002","type":"exact"},{"name":"YL17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT69"}


id: PBO:0117069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L mitochondrial inner membrane insertase","termid":"PBO:0117069"}


id: PBO:0088819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methyltransferase","termid":"PBO:0088819"}


id: PBO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 6","termid":"PBO:0072076"}


id: PR:O13965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug70 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 70 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.05c","synonyms":[{"name":"Spom972h-mug70","type":"exact"}],"termid":"PR:O13965"}


id: SO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A maxicircle is a replicon, part of a kinetoplast, that contains open reading frames and replicates via a rolling circle method.","definition_xrefs":["PMID:8395055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle","secondary_identifiers":["SO:0000827"],"synonyms":[{"name":"maxicircle_chromosome","type":"exact"}],"termid":"SO:0000742"}


id: MONDO:0016434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of dermis elastic tissue disorder that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired dermis elastic tissue disorder (obsolete MONDO:0016434)","secondary_identifiers":["Orphanet:228218"],"synonyms":[{"name":"acquired dermis elastic tissue disorder","type":"exact"}],"termid":"MONDO:0016434","xrefs":{"Monarch":{"xref_id":"0016434"}}}


id: PBO:0031479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_internalization","termid":"PBO:0031479"}


id: GO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a 90S preribosome. The 90S preribosome represents the complex that forms on the primary rRNA transcript before it splits into the small subunit and large subunit portions.","definition_xrefs":["GOC:tb","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"90S preribosome assembly","termid":"GO:0034463"}


id: GO:0039699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An innate immune response evasion mechanism in which a symbiont methylates the 2'-O-ribose of the first or second transcribed nucleotide of its mRNAs. Methylation allows evasion of the host innate immune response, which degrades cap0 (non-methylated) mRNAs. This mechanism of immune evasion is used by viruses.","definition_xrefs":["PMID:35215972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of mRNA degradation by host via mRNA cap methylation","synonyms":[{"name":"IFIT mRNA restriction evasion by virus","type":"exact"},{"name":"evasion of mRNA degradation by host via mRNA cap methylation","type":"exact"},{"name":"viral mRNA cap methylation","type":"related"}],"termid":"GO:0039699"}


id: PBO:0040994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3","termid":"PBO:0040994"}


id: MONDO:0025956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ovarian remnant syndrome (ORS) is characterized by the presence of residual ovarian tissue after a woman has had surgery to remove one ovary or both ovaries (oophorectomy). Signs and symptoms may include pelvic pain, a pelvic mass, or the absence of menopause after oophorectomy. The condition may be caused by surgical factors leading to incomplete removal of ovarian tissue, including factors that limit surgical exposure of the ovary or compromise surgical technique. Factors may include pelvic adhesions (limiting ability to see the ovary or causing it to adhere to other tissues); anatomic variations; bleeding during surgery; or poor surgical technique. Treatment is indicated for people with symptoms and typically involves surgery to remove the residual tissue. Therapy for those who refuse surgery, cannot have surgery, or do not have a pelvic mass may include hormonal therapy to suppress ovarian function.","definition_xrefs":["GARD:0007297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian remnant syndrome","secondary_identifiers":["UMLS:C5886744","icd11.foundation:584962583","MEDGEN:1856973"],"termid":"MONDO:0025956","xrefs":{"Monarch":{"xref_id":"0025956"}}}


id: RO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"m has_muscle_origin s iff m is attached_to s, and it is the case that when m contracts, s does not move. The site of the origin tends to be more proximal and have greater mass than what the other end attaches to.","direct_ancestors":[{"relation_name":"is_a","term_name":"attached_to","termid":"RO:0002371"},{"relation_name":"is_a","term_name":"biomechanically_related_to","termid":"RO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_muscle_origin","termid":"RO:0002372"}


id: SO:0000722
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a polycistronic mRNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_dicistronic_transcript","termid":"SO:0000692"},{"relation_name":"transcribed_to","term_name":"dicistronic_mRNA","termid":"SO:0000716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_mRNA","synonyms":[{"name":"gene with dicistronic mRNA","type":"exact"},{"name":"gene with dicistronic processed transcript","type":"exact"}],"termid":"SO:0000722"}


id: PBO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_organization","termid":"PBO:0030727"}


id: GO:0006414
data:
  {"annotated_genes":["SJAG_01438","SJAG_03461","SJAG_05000","SJAG_04029","SJAG_04756","SJAG_03677","SJAG_02746","SJAG_01128","SJAG_00468","SJAG_00898","SJAG_03428","SJAG_04351","SJAG_04204","SJAG_03863","SJAG_01497","SJAG_04157","SJAG_03189","SJAG_05332","SJAG_01851","SJAG_03094","SJAG_04452","SJAG_04847","SJAG_02871","SJAG_02017","SJAG_05271","SJAG_02738","SJAG_02096","SJAG_00188","SJAG_04020","SJAG_02493","SJAG_04174","SJAG_00541","SJAG_01411","SJAG_02189","SJAG_04168","SJAG_02812","SJAG_02180","SJAG_01536","SJAG_01074","SJAG_02585","SJAG_02353","SJAG_02020","SJAG_00579"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114800],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[108270,119351,105776,118869,119350,95705,97061,98689,109541,58283,117344,109540,116109,115116,119301,118868,105468,105777,116686,114257,116687,105932,98688,119302,68097,118870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002182"},{"annotations":[92345,80343,80515,73917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070125"},{"annotations":[75740],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001125"},{"annotations":[68889,66637],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045901"},{"annotations":[95825,109869,114359,110536],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140018"},{"annotations":[64554,116478,78576,103496,70258,76980,75741,106009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00468":null,"SJAG_00541":null,"SJAG_00579":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01128":null,"SJAG_01411":null,"SJAG_01438":null,"SJAG_01497":null,"SJAG_01536":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02020":null,"SJAG_02096":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02353":null,"SJAG_02493":null,"SJAG_02585":null,"SJAG_02738":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02871":null,"SJAG_03094":null,"SJAG_03189":null,"SJAG_03428":null,"SJAG_03461":null,"SJAG_03677":null,"SJAG_03863":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04157":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04204":null,"SJAG_04351":null,"SJAG_04452":null,"SJAG_04756":null,"SJAG_04847":null,"SJAG_05000":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational elongation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006442","Reactome:R-HSA-156842","GO:0006455"],"synonyms":[{"name":"protein synthesis elongation","type":"broad"},{"name":"translation elongation","type":"exact"}],"termid":"GO:0006414","terms_by_termid":{"GO:0002182":null,"GO:0045901":null,"GO:0070125":null,"GO:0072344":null,"GO:0140018":null,"GO:0140708":null,"GO:2001125":null}}


id: PBO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 88 pseudogene","termid":"PBO:0070174"}


id: SO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"By definition, minigenes are short open-reading frames (ORF), usually encoding approximately 9 to 20 amino acids, which are expressed in vivo (as distinct from being synthesized as peptide or protein ex vivo and subsequently injected). The in vivo synthesis confers a distinct advantage: the expressed sequences can enter both antigen presentation pathways, MHC I (inducing CD8+ T- cells, which are usually cytotoxic T-lymphocytes (CTL)) and MHC II (inducing CD4+ T-cells, usually 'T-helpers' (Th)); and can encounter B-cells, inducing antibody responses. Three main vector approaches have been used to deliver minigenes: viral vectors, bacterial vectors and plasmid DNA.","definition_xrefs":["PMID:15992143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mini_gene","synonyms":[{"name":"mini gene","type":"exact"}],"termid":"SO:0000815"}


id: PBO:0087142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that modulates mRNA stability; regulates genes involved in cell cycle, sister chromatid cohesion, and stress response; modulates stability and translational efficiency of CLN3 mRNA; colocalizes with P-bodies/stress granules where it may sequester specific mRNAs; regulates cell fate and critical cell size required for passage through Start; regulates ploidy; forms aggregates in older cells, leading to sterility","termid":"PBO:0087142"}


id: PBO:0050668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 5","termid":"PBO:0050668"}


id: PBO:0084681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial branched-chain amino acid (BCAA) aminotransferase; preferentially involved in BCAA biosynthesis; homolog of murine ECA39; highly expressed during logarithmic phase and repressed during stationary phase; BAT1 has a paralog, BAT2, that arose from the whole genome duplication","termid":"PBO:0084681"}


id: PBO:0052551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C4","termid":"PBO:0052551"}


id: PBO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 6B","termid":"PBO:0052066"}


id: PBO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug94","termid":"PBO:0016911"}


id: GO:0061222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesonephric mesenchymal cell population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"is_a","term_name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell proliferation involved in mesonephros development","termid":"GO:0061222"}


id: GO:0070953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a fungal cell, the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"}


id: PATO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being narrow, with the two opposite margins parallel.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear","termid":"PATO:0001199"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0098754","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: FYPO:0006484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin dsDNA (leading strand) loading does not occur during the mitotic cell cycle. Cohesin dsDNA (leading strand) loading is the topological linking of a cohesin ring complex to double-stranded DNA of the leading strand in chromatin.","definition_xrefs":["GO:0062021","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic cohesin loading","termid":"FYPO:0005556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic cohesin dsDNA (leading strand) loading","synonyms":[{"name":"abolished cohesin dsDNA (leading strand) loading during mitotic cell cycle","type":"exact"},{"name":"abolished cohesin dsDNA (leading strand) loading during vegetative growth","type":"exact"},{"name":"abolished mitotic cohesin association with dsDNA (leading strand) chromatin","type":"exact"},{"name":"abolished mitotic cohesin localization to dsDNA (leading strand) chromatin","type":"exact"},{"name":"mitotic cohesin dsDNA (leading strand) loading abolished","type":"exact"}],"termid":"FYPO:0006484"}


id: GO:0045664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron differentiation","termid":"GO:0045664"}


id: PBO:0110204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5.2","termid":"PBO:0110204"}


id: PBO:0117189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGR3 and PEBP4 antisense RNA 1","termid":"PBO:0117189"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: FYPO:0000407
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[119984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[119697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest phenotype","termid":"FYPO:0001024"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormally arrested cell cycle progression","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_04284","SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest","type":"exact"},{"name":"abnormally arrested cell cycle progression during mitotic cell cycle","type":"related"},{"name":"abnormally arrested cell cycle progression during vegetative growth","type":"exact"},{"name":"cell cycle progression: arrested","type":"related"}],"termid":"FYPO:0000407","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0074421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 20","termid":"PBO:0074421"}


id: GO:0102210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a rhamnogalacturonan type I = [rhamnogalacturonan I oligosaccharide]-alpha-L-rhamnose + 4-deoxy-4,5-unsaturated D-galactopyranosyluronate-[rhamnogalacturonan I oligosaccharide].","definition_xrefs":["GOC:pz","EC:4.2.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"rhamnogalacturonan endolyase activity","secondary_identifiers":["MetaCyc:RXN-12173"],"termid":"GO:0102210"}


id: GO:0071431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains transfer RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071431)","synonyms":[{"name":"tRNA-containing RNP export from nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071431"}


id: PBO:0041224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 21","termid":"PBO:0041224"}


id: GO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of bacterium","type":"narrow"}],"termid":"GO:0070956"}


id: PATO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000728 metabolic function value (obsolete PATO:0000728)","termid":"PATO:0000728"}


id: PBO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p25.1)","termid":"PBO:0047888"}


id: PBO:0081908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 875","termid":"PBO:0081908"}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: PR:Q9USX2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1921.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USX2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1921.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.04c","synonyms":[{"name":"Spom972h-SPBC1921.04c","type":"exact"}],"termid":"PR:Q9USX2"}


id: PR:O60074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- did2 gene.","definition_xrefs":["UniProtKB:O60074","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting-associated protein 46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.12","synonyms":[{"name":"Spom972h-did2","type":"exact"},{"name":"charged multivesicular body protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"doa4-independent degradation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60074"}


id: PBO:0086407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative glutamine amidotransferase; has Aft1p-binding motif in the promoter; may be involved in copper and iron homeostasis; YLR126C is not an essential protein; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0086407"}


id: MONDO:0003906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the ovary and is characterized by the presence of extensive differentiation into hepatic tissue.","definition_xrefs":["NCIT:C39989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian yolk sac tumor","termid":"MONDO:0006344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian yolk sac tumor, hepatoid pattern","secondary_identifiers":["UMLS:C1518748","DOID:6512","MEDGEN:276676"],"synonyms":[{"name":"hepatoid pattern ovarian yolk sac tumor","type":"related"},{"name":"hepatoid pattern ovarian yolk sac tumour","type":"related"},{"name":"ovarian yolk Sac tumor, hepatoid pattern","type":"exact"}],"termid":"MONDO:0003906","xrefs":{"Monarch":{"xref_id":"0003906"}}}


id: PBO:0038833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 6","termid":"PBO:0038833"}


id: PBO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3h (p40)","termid":"PBO:0000708"}


id: MONDO:0012987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the CD79B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 6, autosomal recessive","secondary_identifiers":["MEDGEN:461557","GARD:15579","OMIM:612692","UMLS:C3150207","DOID:0081138"],"synonyms":[{"name":"AGM6","type":"related"},{"name":"CD79B autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 6, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to Cd79B defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in CD79B","type":"exact"}],"termid":"MONDO:0012987","xrefs":{"Monarch":{"xref_id":"0012987"}}}


id: GO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoylglycine => H2O + imidazol-4-one.","definition_xrefs":["PMID:27286964","RHEA:24935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"imidazolone hydrolase activity","termid":"GO:0043804"}


id: PBO:0072621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 6 homolog A","termid":"PBO:0072621"}


id: GO:0160082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-prolyl-[hypoxia-inducible factor alpha subunit] + O2 = CO2 + succinate + trans-4-hydroxy-L-prolyl-[hypoxia-inducible factor alpha subunit].","definition_xrefs":["PMID:11595184","PMID:11598268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"hypoxia-inducible factor-proline dioxygenase activity","secondary_identifiers":["RHEA:48400","EC:1.14.11.29"],"synonyms":[{"name":"HIF hydroxylase","type":"broad"},{"name":"HIF prolyl hydroxylase","type":"exact"}],"termid":"GO:0160082"}


id: GO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a myeloid dendritic cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell cytokine production","termid":"GO:0002371"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}


id: GO:0005997
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xylulose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xylulose metabolism","type":"exact"}],"termid":"GO:0005997","terms_by_termid":{"GO:0005998":null}}


id: GO:0047964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolate + NAD+ = glyoxylate + NADH.","definition_xrefs":["RHEA:18229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyoxylate reductase activity","termid":"GO:0106345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyoxylate reductase (NADH) activity","secondary_identifiers":["MetaCyc:GLYCOLATE-REDUCTASE-RXN","EC:1.1.1.26"],"synonyms":[{"name":"NADH-dependent glyoxylate reductase activity","type":"related"},{"name":"glycolate reductase activity","type":"related"},{"name":"glyoxylic acid reductase activity","type":"related"}],"termid":"GO:0047964"}


id: GO:0180053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex comprising of the 28S small mitoribosomal subunit (mt-SSU) and mitochondrial initiation factors (e.g. mtIF3 and mtIF2-GTP) and the initiator tRNA-Met and an mRNA binding. The early steps of translation initiation, including the association of the 28S mitochondrial small subunit (mt-SSU) with initiation factors (mtIF3 and mtIF2), prevention of premature large subunit (39S) joining occur during the assembly of the mitochondrial pre-initiation complex (mtPIC).","definition_xrefs":["PMID:32522994","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial translation preinitiation complex","synonyms":[{"name":"mitochondrial translation pre-initiation complex","type":"exact"}],"termid":"GO:0180053"}


id: GO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + ribose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ADP-ribose pyrophosphohydrolase activity","termid":"GO:0080041"}


id: MONDO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cronkhite-Canada syndrome (CCS) is a rare gastrointestinal (GI) polyposis syndrome characterized by the association of non-hereditary GI polyposis with the cutaneous triad of alopecia, nail changes and hyperpigmentation.","definition_xrefs":["Orphanet:2930"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gastric hamartomatous polyp","termid":"MONDO:0006224"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005093"],"is_obsolete":false,"name":"Cronkhite-Canada syndrome","secondary_identifiers":["DOID:6225","MedDRA:10062907","GARD:4427","NCIT:C7035","MESH:D044483","SCTID:76304001","UMLS:C0282207","OMIM:175500","MEDGEN:129128","NANDO:1200901","icd11.foundation:79007466"],"synonyms":[{"name":"Cronkhite-Canada disease","type":"related"},{"name":"Cronkhite-Canada syndrome","type":"exact"},{"name":"gastric Cronkhite Canada polyposis","type":"exact"},{"name":"gastrointestinal polyposis-ectodermal changes syndrome","type":"exact"},{"name":"gastrointestinal polyposis-skin pigmentation-alopecia-fingernail changes syndrome","type":"exact"},{"name":"polyposis skin pigmentation alopecia fingernail changes","type":"related"},{"name":"polyposis, skin pigmentation, alopecia, and fingernail changes","type":"related"}],"termid":"MONDO:0008283","xrefs":{"Monarch":{"xref_id":"0008283"}}}


id: MONDO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheo-esophageal fistula-hypospadias syndrome (obsolete MONDO:0016082)","secondary_identifiers":["Orphanet:2042"],"termid":"MONDO:0016082","xrefs":{"Monarch":{"xref_id":"0016082"}}}


id: SO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL7 RNA leader sequence to the 5' end of an mRNA. SL7 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL7_acceptor_site","synonyms":[{"name":"SL37 acceptor site","type":"exact"}],"termid":"SO:0001752"}


id: PBO:0073391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 6, protein lysine methyltransferase","termid":"PBO:0073391"}


id: MONDO:1011538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertriglyceridemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertriglyceridemia, non-human animal","termid":"MONDO:1011417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertriglyceridemia, domestic cat","secondary_identifiers":["OMIA:000514-9685"],"termid":"MONDO:1011538","xrefs":{"Monarch":{"xref_id":"1011538"}}}


id: PBO:0066123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 3","termid":"PBO:0066123"}


id: MONDO:0021581
data:
  {"annotated_genes":["SJAG_01013","SJAG_01349","SJAG_01748","SJAG_03881","SJAG_04287","SJAG_03453","SJAG_02855","SJAG_03905","SJAG_03429","SJAG_01151","SJAG_05979","SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87721,87566,87565,87720,87568,87567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[86526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[85695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[86030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[87046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"Neoplasms composed of connective tissue, including elastic, mucous, reticular, osseous, and cartilaginous tissue. The concept does not refer to neoplasms located in connective tissue.","definition_xrefs":["MESH:D009372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02855":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0027656","MEDGEN:45035","SCTID:126598008","ICD9:239.2"],"synonyms":[{"name":"connective tissue neoplasm","type":"exact"},{"name":"connective tissue neoplasm (disease)","type":"exact"},{"name":"connective tissue neoplasms","type":"related"},{"name":"connective tissue tumor","type":"exact"},{"name":"connective tissue tumour","type":"exact"},{"name":"neoplasm of connective tissue","type":"exact"},{"name":"neoplasm of connective tissues","type":"exact"},{"name":"neoplasm, connective tissue","type":"related"},{"name":"tumor of connective tissue","type":"exact"},{"name":"tumour of connective tissue","type":"exact"}],"termid":"MONDO:0021581","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0009050":null,"MONDO:0010621":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0021581"}}}


id: PBO:0045172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 6","termid":"PBO:0045172"}


id: GO:0030813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"positively_regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of nucleotide catabolic process","synonyms":[{"name":"activation of nucleotide catabolic process","type":"narrow"},{"name":"positive regulation of nucleotide breakdown","type":"exact"},{"name":"positive regulation of nucleotide catabolism","type":"exact"},{"name":"positive regulation of nucleotide degradation","type":"exact"},{"name":"stimulation of nucleotide catabolic process","type":"narrow"},{"name":"up regulation of nucleotide catabolic process","type":"exact"},{"name":"up-regulation of nucleotide catabolic process","type":"exact"},{"name":"upregulation of nucleotide catabolic process","type":"exact"}],"termid":"GO:0030813"}


id: GO:0141113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["PMID:19056682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:2000095"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0141113"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: MONDO:0006214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonencapsulated variant of papillary carcinoma of the thyroid gland characterized by the predominance of follicular structures. The malignant follicular cells display the nuclear features that characterize the papillary adenocarcinomas of the thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"follicular variant thyroid gland papillary carcinoma","secondary_identifiers":["EFO:1000261","NCIT:C126594","MEDGEN:811427","UMLS:C3714651"],"synonyms":[{"name":"FVPTC","type":"exact"}],"termid":"MONDO:0006214","xrefs":{"Monarch":{"xref_id":"0006214"}}}


id: PATO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior orientation","synonyms":[{"name":"posteriorly directed","type":"exact"}],"termid":"PATO:0002499"}


id: FYECO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which torin1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ torin1","synonyms":[{"name":"Torin1","type":"exact"}],"termid":"FYECO:0000390"}


id: PBO:0087696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; interacts with Spp1p and with trimethylated histone H3; phosphorylated by Cdc28p","termid":"PBO:0087696"}


id: PBO:0034708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain metallopeptidase implicated in DNA repair Wss1 (predicted)","termid":"PBO:0034708"}


id: MONDO:0010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atkin-Flaitz syndrome is characterized by moderate to severe intellectual deficit, short stature, macrocephaly, and characteristic facies. It has been described in 11 males and three females from three successive generations of the same family. The males also presented with postpubertal macroorchidism. Transmission is X-linked.","definition_xrefs":["Orphanet:1193"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atkin-Flaitz syndrome","secondary_identifiers":["UMLS:C0796206","OMIM:300431","MEDGEN:163230","GARD:3537","SCTID:718577005"],"synonyms":[{"name":"Atkin syndrome","type":"related"},{"name":"Atkin-Flaitz syndrome","type":"exact"},{"name":"X-linked intellectual disability, Atkin type","type":"exact"}],"termid":"MONDO:0010323","xrefs":{"Monarch":{"xref_id":"0010323"}}}


id: MONDO:0018329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete persistent combined dystonia (obsolete MONDO:0018329)","secondary_identifiers":["Orphanet:391711"],"termid":"MONDO:0018329","xrefs":{"Monarch":{"xref_id":"0018329"}}}


id: GO:0051388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the neurotrophin TRK receptor signaling pathway.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neurotrophin TRK receptor signaling pathway","termid":"GO:0051386"},{"relation_name":"positively_regulates","term_name":"neurotrophin TRK receptor signaling pathway","termid":"GO:0048011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neurotrophin TRK receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-9025046","Reactome:R-HSA-9026357","Reactome:R-HSA-9034013","Reactome:R-HSA-9024909","Reactome:R-HSA-9034793"],"synonyms":[{"name":"activation of nerve growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of NGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of NGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of nerve growth factor receptor signaling pathway","type":"related"},{"name":"positive regulation of nerve growth factor receptor signalling pathway","type":"exact"},{"name":"stimulation of nerve growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of nerve growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of nerve growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of nerve growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0051388"}


id: PBO:0000788
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.-","termid":"PBO:0000788"}


id: PATO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001045 relative power (obsolete PATO:0001045)","termid":"PATO:0001045"}


id: FYPO:0000156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal chromatin silencing at silent mating-type cassette","synonyms":[{"name":"abnormal chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"abnormal chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0000156"}


id: GO:0050919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a lower concentration of a chemical.","definition_xrefs":["GOC:bf","GOC:ai","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative chemotaxis","synonyms":[{"name":"chemoaversion","type":"exact"},{"name":"chemorepulsion","type":"exact"}],"termid":"GO:0050919"}


id: GO:2000687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000687)","synonyms":[{"name":"negative regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000687"}


id: FYPO:0005816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal microtubule-based movement","synonyms":[{"name":"normal microtubule-based movement during mitotic cell cycle","type":"related"},{"name":"normal microtubule-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005816"}


id: MONDO:0017527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of an index finger","termid":"MONDO:0008271"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of an index finger, unilateral","secondary_identifiers":["icd11.foundation:734031453","Orphanet:295152"],"synonyms":[{"name":"preaxial polydactyly type 3, unilateral","type":"exact"}],"termid":"MONDO:0017527","xrefs":{"Monarch":{"xref_id":"0017527"}}}


id: GO:0060447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a region of the lung epithelium initiates an outgrowth.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud outgrowth involved in lung branching","synonyms":[{"name":"bud formation involved in lung branching","type":"exact"}],"termid":"GO:0060447"}


id: GO:0140445
data:
  {"annotated_genes":["SJAG_04140","SJAG_04863","SJAG_03298","SJAG_04186","SJAG_04586","SJAG_06642","SJAG_01675","SJAG_05373","SJAG_03356","SJAG_04700","SJAG_03026","SJAG_05105","SJAG_01837","SJAG_00939","SJAG_03128","SJAG_03722","SJAG_05239","SJAG_02348","SJAG_04190","SJAG_02563","SJAG_00676","SJAG_02621","SJAG_05979","SJAG_03855","SJAG_00293","SJAG_02212","SJAG_04372","SJAG_03048","SJAG_01777","SJAG_03982","SJAG_01377","SJAG_04150","SJAG_04245","SJAG_01864","SJAG_03287","SJAG_03460","SJAG_05260","SJAG_04183","SJAG_00640","SJAG_03844","SJAG_04205","SJAG_04097","SJAG_02872","SJAG_00934","SJAG_03720","SJAG_00884","SJAG_02908","SJAG_05353","SJAG_04201","SJAG_02863","SJAG_00429","SJAG_03780","SJAG_04400","SJAG_02768","SJAG_02576","SJAG_01698","SJAG_03685","SJAG_02818","SJAG_01605","SJAG_02771","SJAG_02778","SJAG_02116","SJAG_05372","SJAG_02194","SJAG_03092","SJAG_05173","SJAG_00364","SJAG_06560","SJAG_06597","SJAG_02362","SJAG_01378","SJAG_00378"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71352,87747,88889,89472,90984,91782,92425,92882,97773,98634,99542,99815,99914,100281,101220,101495,102704,104507,104542,106519,106984,107712,108493,108531,109482,110595,111570,111916,111929,112108,112484,112897,113211,113262,113312,113313,113314,113315,113316,113672,116636,116705,118479,119008,57656,58300,58704,58861,59272,59453,59876,60084,60344,61639,64030,66343,66448,66648,67502,69562,69714,77509,117052],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[63453,110753],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990879"},{"annotations":[90119,92195,95453,80153,116330,100081],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070187"},{"annotations":[108308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000782"}]},"cv_name":"cellular_component","definition":"A complex of DNA and protein that seals the end of a chromosome. The telomeric repeat DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA and seal the telomeric loop.","definition_xrefs":["PMID:30208292","PMID:11352055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, telomeric region","termid":"GO:0000781"}],"gene_count":72,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00364":null,"SJAG_00378":null,"SJAG_00429":null,"SJAG_00640":null,"SJAG_00676":null,"SJAG_00884":null,"SJAG_00934":null,"SJAG_00939":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01605":null,"SJAG_01675":null,"SJAG_01698":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_01864":null,"SJAG_02116":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02621":null,"SJAG_02768":null,"SJAG_02771":null,"SJAG_02778":null,"SJAG_02818":null,"SJAG_02863":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03128":null,"SJAG_03287":null,"SJAG_03298":null,"SJAG_03356":null,"SJAG_03460":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03844":null,"SJAG_03855":null,"SJAG_03982":null,"SJAG_04097":null,"SJAG_04140":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04186":null,"SJAG_04190":null,"SJAG_04201":null,"SJAG_04205":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04400":null,"SJAG_04586":null,"SJAG_04700":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05239":null,"SJAG_05260":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06560":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"chromosome, telomeric repeat region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0140445","terms_by_termid":{"GO:0000782":null,"GO:0070187":null,"GO:0140445":null,"GO:1990879":null}}


id: MONDO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of gallbladder and extrahepatic biliary tract (obsolete MONDO:0017631)","secondary_identifiers":["Orphanet:306633"],"synonyms":[{"name":"rare tumor of gallbladder and EBT","type":"exact"}],"termid":"MONDO:0017631","xrefs":{"Monarch":{"xref_id":"0017631"}}}


id: GO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a monooxygenase reaction in which oxygen is incorporated into limonene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"limonene monooxygenase activity","termid":"GO:0019113"}


id: PBO:0054775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2188","termid":"PBO:0054775"}


id: FYPO:0002621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abnormal 'malic' enzyme activity","type":"related"},{"name":"abnormal (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abnormal NAD-linked malic enzyme activity","type":"related"},{"name":"abnormal NAD-malic enzyme activity","type":"broad"},{"name":"abnormal NAD-specific malic enzyme activity","type":"related"},{"name":"abnormal malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0002621"}


id: MONDO:0004049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurotic reactions to unusual, severe, or overwhelming military stress.","definition_xrefs":["MESH:D003130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute stress disorder","termid":"MONDO:0003763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combat disorder","secondary_identifiers":["MEDGEN:40403","UMLS:C0009426","SCTID:279611005","DOID:6950"],"synonyms":[{"name":"Shocks, shell","type":"related"},{"name":"combat disorder","type":"exact"},{"name":"combat neuroses","type":"related"},{"name":"combat neurosis","type":"exact"},{"name":"combat stress disorder","type":"related"},{"name":"combat stress disorders","type":"related"},{"name":"disorder, combat","type":"related"},{"name":"disorder, combat stress","type":"related"},{"name":"disorders, combat","type":"related"},{"name":"disorders, combat stress","type":"related"},{"name":"neuroses, combat","type":"related"},{"name":"neuroses, war","type":"related"},{"name":"neurosis, combat","type":"related"},{"name":"neurosis, war","type":"related"},{"name":"shell Shocks","type":"related"},{"name":"shell shock","type":"related"},{"name":"shock, shell","type":"related"},{"name":"stress disorder, combat","type":"related"},{"name":"stress disorders, combat","type":"related"},{"name":"war neuroses","type":"related"},{"name":"war neurosis","type":"related"}],"termid":"MONDO:0004049","xrefs":{"Monarch":{"xref_id":"0004049"}}}


id: GO:0140256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:29414789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"},{"relation_name":"negatively_regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to phosphate starvation","termid":"GO:0140256"}


id: GO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors, which occur in the presence of light.","definition_xrefs":["PMID:12242396","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"light-dependent chlorophyll biosynthetic process","synonyms":[{"name":"light dependent chlorophyll biosynthetic process","type":"exact"},{"name":"light-dependent chlorophyll anabolism","type":"exact"},{"name":"light-dependent chlorophyll biosynthesis","type":"exact"},{"name":"light-dependent chlorophyll formation","type":"exact"},{"name":"light-dependent chlorophyll synthesis","type":"exact"}],"termid":"GO:0036067"}


id: PBO:0081304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 85","termid":"PBO:0081304"}


id: PBO:0051087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma P (non-functional)","termid":"PBO:0051087"}


id: MONDO:1010068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, non-human animal","secondary_identifiers":["OMIA:001102"],"termid":"MONDO:1010068","xrefs":{"Monarch":{"xref_id":"1010068"}}}


id: PBO:0056829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondria localized glutamic acid rich protein","termid":"PBO:0056829"}


id: RO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved in regulation of p if c is involved in some 'p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"RO:0002263"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"RO:0002431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","termid":"RO:0002428"}


id: PBO:0034317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_II_bouton","termid":"PBO:0034317"}


id: PBO:0004814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis factor recycling AAA family ATPase (predicted)","termid":"PBO:0004814"}


id: PBO:0074444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 45","termid":"PBO:0074444"}


id: PBO:0085902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in resistance to carboplatin and cisplatin; null mutant displays increase in spontaneous Rad52p foci; contains a lipid-binding domain and binds cardiolipin in a large-scale study","termid":"PBO:0085902"}


id: PBO:0028691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_organization","termid":"PBO:0028691"}


id: GO:1905900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle tissue development.","definition_xrefs":["PMID:14709716","GOC:bhm","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle tissue development","termid":"GO:1901862"},{"relation_name":"is_a","term_name":"regulation of smooth muscle tissue development","termid":"GO:1905899"},{"relation_name":"negatively_regulates","term_name":"smooth muscle tissue development","termid":"GO:0048745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle tissue development","synonyms":[{"name":"down regulation of smooth muscle tissue development","type":"exact"},{"name":"down-regulation of smooth muscle tissue development","type":"exact"},{"name":"downregulation of smooth muscle tissue development","type":"exact"},{"name":"inhibition of smooth muscle tissue development","type":"narrow"}],"termid":"GO:1905900"}


id: PBO:0070136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 50 pseudogene","termid":"PBO:0070136"}


id: PBO:0052267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM4A antisense RNA 1","termid":"PBO:0052267"}


id: MONDO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pigmentation defects-palmoplantar keratoderma-skin carcinoma syndrome","secondary_identifiers":["Orphanet:447961","GARD:17776","MEDGEN:1807813","UMLS:C5681108","OMIM:618373"],"synonyms":[{"name":"CANCER, ALOPECIA, PIGMENT DYSCRASIA, ONYCHODYSTROPHY, AND KERATODERMA","type":"related"},{"name":"CAPOK","type":"related"}],"termid":"MONDO:0018657","xrefs":{"Monarch":{"xref_id":"0018657"}}}


id: MONDO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophyte disease of the glabrous skin, excluding the scalp, beard, face, hands, feet, and groin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea corporis","secondary_identifiers":["MEDGEN:508197","UMLS:C0040252","DOID:12179","SCTID:84849002","ICD10CM:B35.4","ICD9:110.5"],"synonyms":[{"name":"dermatophytosis of the body","type":"exact"},{"name":"dermatophytosis of the trunk","type":"exact"}],"termid":"MONDO:0001461","xrefs":{"Monarch":{"xref_id":"0001461"}}}


id: PBO:0091385
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs-Like","termid":"PBO:0091385"}


id: PBO:0080444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 1","termid":"PBO:0080444"}


id: PBO:0082950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic nucleoporin required for polyadenylated mRNA export; contains a nuclear export signal; when bound to inositol hexakisphosphate (IP6), functions as an activator for the Dbp5p ATPase activity at the nuclear pore complex during mRNA export; mediates translation initiation; required for efficient translation termination","termid":"PBO:0082950"}


id: PBO:0079028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-1","termid":"PBO:0079028"}


id: PBO:0042189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D1","termid":"PBO:0042189"}


id: PBO:0090707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga5","termid":"PBO:0090707"}


id: PBO:0072215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 14","termid":"PBO:0072215"}


id: MONDO:0004934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the periosteum. The condition is generally chronic, and is marked by tenderness and swelling of the bone and an aching pain. Acute periostitis is due to infection, is characterized by diffuse suppuration, severe pain, and constitutional symptoms, and usually results in necrosis. (Dorland, 27th ed)","definition_xrefs":["MESH:D010522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periostitis","secondary_identifiers":["icd11.foundation:505688542","UMLS:C0031111","HP:0040165","MEDGEN:45816","DOID:9957","NCIT:C13184","SCTID:41910004"],"synonyms":[{"name":"inflammation of periosteum","type":"exact"},{"name":"periosteum","type":"exact"},{"name":"periosteum inflammation","type":"exact"},{"name":"periostitis","type":"exact"},{"name":"periostitis (disease)","type":"exact"}],"termid":"MONDO:0004934","xrefs":{"Monarch":{"xref_id":"0004934"}}}


id: GO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["GOC:fj","PMID:20920515","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium channel activity in another organism (obsolete GO:0035917)","synonyms":[{"name":"down-regulation of calcium channel activity in other organism","type":"exact"},{"name":"downregulation of calcium channel activity in other organism","type":"exact"},{"name":"inhibition of calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035917"}


id: PBO:0078146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 25","termid":"PBO:0078146"}


id: PBO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.1","termid":"PBO:0000162"}


id: GO:0051193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cofactor metabolic process (obsolete GO:0051193)","synonyms":[{"name":"regulation of cofactor metabolism","type":"exact"}],"termid":"GO:0051193"}


id: MONDO:0006043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of invasive breast carcinomas characterized by the presence of an adenocarcinomatous component which is admixed with a dominant component that is composed of squamous cells, spindle cells, or mesenchymal cells.","definition_xrefs":["NCIT:C5164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metaplastic breast carcinoma","secondary_identifiers":["MEDGEN:277360","DOID:4680","ONCOTREE:MBC","ICD10CM:C50.3","EFO:1000040","ICD10CM:C50.6","ICD10CM:C50.2","Orphanet:213531","UMLS:C1334708","SCTID:763479005","GARD:10804"],"synonyms":[{"name":"breast metaplastic carcinoma","type":"related"},{"name":"metaplastic breast cancer","type":"related"},{"name":"metaplastic breast carcinoma","type":"exact"},{"name":"metaplastic carcinoma of breast","type":"exact"},{"name":"metaplastic carcinoma of the breast","type":"exact"}],"termid":"MONDO:0006043","xrefs":{"Monarch":{"xref_id":"0006043"}}}


id: PBO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 2","termid":"PBO:0070408"}


id: GO:1903394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to kinetochore that is involved in kinetochore assembly.","definition_xrefs":["GOC:TermGenie","PMID:15369671","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"},{"relation_name":"part_of","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein localization to kinetochore involved in kinetochore assembly","synonyms":[{"name":"condensin localization to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"condensin localization to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"condensin localization to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"condensin localization to kinetochore involved in kinetochore assembly","type":"narrow"},{"name":"condensin localization to kinetochore involved in kinetochore formation","type":"related"},{"name":"protein localisation to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"protein localisation to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"protein localisation to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"protein localisation to kinetochore involved in kinetochore assembly","type":"exact"},{"name":"protein localisation to kinetochore involved in kinetochore formation","type":"related"},{"name":"protein localization to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"protein localization to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"protein localization to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"protein localization to kinetochore involved in kinetochore formation","type":"related"}],"termid":"GO:1903394"}


id: PBO:0062876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase with linear linkage specificity like","termid":"PBO:0062876"}


id: PBO:0112645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse P component","termid":"PBO:0112645"}


id: FYPO:0004625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which post-anaphase microtubule array organization is abnormal. Post-anaphase microtubule array organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of the post-anaphase microtubule array.","definition_xrefs":["PMID:1904186","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal post-anaphase microtubule array organization","synonyms":[{"name":"abnormal PAA organization","type":"exact"},{"name":"abnormal post-anaphase array organization","type":"exact"},{"name":"abnormal post-anaphase microtubule array organisation","type":"exact"},{"name":"abnormal post-anaphase microtubule array organization during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase microtubule array organization during vegetative growth","type":"exact"}],"termid":"FYPO:0004625"}


id: MONDO:0013535
data:
  {"annotated_genes":["SJAG_01596"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86312],"is_not":false,"summary":null,"term":"MONDO:0013535"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01596":null},"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl glutathione hydrolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481287","MESH:C564215","UMLS:C3279657","OMIM:614033"],"synonyms":[{"name":"glyoxalase 2 deficiency","type":"related"},{"name":"glyoxalase II deficiency","type":"exact"},{"name":"hydroxyacyl glutathione hydrolase deficiency","type":"exact"}],"termid":"MONDO:0013535","terms_by_termid":{"MONDO:0013535":null},"xrefs":{"Monarch":{"xref_id":"0013535"}}}


id: PR:O94301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hfi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator hfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.18c","synonyms":[{"name":"Spom972h-hfi1","type":"exact"}],"termid":"PR:O94301"}


id: MONDO:0017850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sirenomelia is a rare, genetic, developmental defect during embryogenesis disorder characterized by fusion of the lower limbs and associated with some degree of lower extremity reduction and persistent vitelline artery. Patients also present severe malformations of the musculoskeletal system (e.g. sacral agenesis), as well as the urogenital and lower gastrointestinal tracts (e.g. renal agenesis, absent bladder, rectal/anal atresia, and absent internal genitalia). Most cases are stillborn, or die during, or shortly after, birth.","definition_xrefs":["Orphanet:3169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial caudal dysgenesis","termid":"MONDO:0010831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirenomelia","secondary_identifiers":["NORD:1720","GARD:7652","icd11.foundation:473306797","MedDRA:10049216","SCTID:67254002","MEDGEN:52357","NCIT:C118455","UMLS:C0037205"],"synonyms":[{"name":"Fused legs and feet","type":"related"},{"name":"Sirenomelus","type":"related"},{"name":"mermaid malformation","type":"related"},{"name":"mermaid syndrome","type":"related"},{"name":"sirenomelia sequence","type":"related"},{"name":"symmelia","type":"exact"}],"termid":"MONDO:0017850","xrefs":{"Monarch":{"xref_id":"0017850"}}}


id: GO:0047541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-furoate + ATP + CoA = 2-furoyl-CoA + AMP + diphosphate + H+.","definition_xrefs":["RHEA:19269","EC:6.2.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"2-furoate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R02986","MetaCyc:2-FUROATE--COA-LIGASE-RXN"],"synonyms":[{"name":"2-furoate:CoA ligase (AMP-forming)","type":"related"},{"name":"2-furoyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0047541"}


id: PBO:0079077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-5","termid":"PBO:0079077"}


id: PBO:0090560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ZIP zinc transmembrane transporter Zrt1","termid":"PBO:0090560"}


id: PBO:0087021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 40S subunit protein S0A; required for maturation of 18S rRNA along with Rps0Bp; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal; homologous to human ribosomal protein SA and bacterial S2; RPS0A has a paralog, RPS0B, that arose from the whole genome duplication;","termid":"PBO:0087021"}


id: GO:0106291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + 2 O2 = H+ + NAD+ + 2 superoxide.","definition_xrefs":["RHEA:63184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide-generating NAD(P)H oxidase activity","termid":"GO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"superoxide-generating NADH oxidase activity","termid":"GO:0106291"}


id: GO:0010380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.","definition_xrefs":["PMID:17291312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"}


id: FYPO:0007630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 at ribosomal DNA occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at ribosomal DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0007630"}


id: PBO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 23","termid":"PBO:0046642"}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["PMID:12213832","PMID:14754902","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: FYPO:0000532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic cell cycle arrest in response to pheromone is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"decreased pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: decreased","type":"related"},{"name":"reduced mitotic cell cycle arrest in response to pheromone","type":"exact"}],"termid":"FYPO:0000532"}


id: GO:0043860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"cyanophycin synthetase activity","synonyms":[{"name":"cphA","type":"related"}],"termid":"GO:0043860"}


id: GO:0008143
data:
  {"annotated_genes":["SJAG_01910","SJAG_00425","SJAG_03747","SJAG_02808","SJAG_03448","SJAG_01650","SJAG_04427","SJAG_03283","SJAG_04601","SJAG_01222","SJAG_03214","SJAG_04271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70751,70942,73362,75025,76584,77947,79285,89440,89804,89846,97467,97906],"is_not":false,"summary":null,"term":"GO:0008143"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-purine tract binding","termid":"GO:0070717"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01910":null,"SJAG_02808":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03747":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"poly(A) binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) binding, within an RNA molecule","type":"exact"},{"name":"poly(rA) binding","type":"exact"},{"name":"poly-A binding","type":"exact"},{"name":"polyadenylate binding","type":"exact"}],"termid":"GO:0008143","terms_by_termid":{"GO:0008143":null}}


id: GO:0006481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the C-terminal amino acid of a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"C-terminal protein amino acid modification","termid":"GO:0018410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein methylation","synonyms":[{"name":"C-terminal protein amino acid methylation","type":"exact"}],"termid":"GO:0006481"}


id: GO:1905725
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a microtubule end.","definition_xrefs":["GOC:TermGenie","PMID:12034771","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule end","type":"exact"}],"termid":"GO:1905725","terms_by_termid":{"GO:1904518":null}}


id: FYPO:0003340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle is decreased when the cell is in a population that has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah","PMID:9199286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"decreased re-entry into mitotic cell cycle during recovery from stationary phase","synonyms":[{"name":"decreased re-entry into mitotic cell cycle following growth to stationary phase","type":"exact"},{"name":"reduced re-entry into mitotic cell cycle during recovery from stationary phase","type":"exact"}],"termid":"FYPO:0003340"}


id: PBO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' exonuclease (predicted)","termid":"PBO:0000802"}


id: PBO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog","termid":"PBO:0016585"}


id: PBO:0084642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein; component of the interface between microtubules and kinetochore, involved in sister chromatid separation; essential in polyploid cells but not in haploid or diploid cells; promotes plus-end directed movement of Dyn1p; ortholog of mammalian CLIP-170","termid":"PBO:0084642"}


id: FYPO:0001383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA content","termid":"FYPO:0001383"}


id: PBO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 141 pseudogene","termid":"PBO:0070212"}


id: MONDO:0024491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a cancerous lesion is well differentiated.","definition_xrefs":["NCIT:C28077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor grade 1 or 2, general grading system","termid":"MONDO:0024495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 1, general grading system","secondary_identifiers":["UMLS:C0475269","MEDGEN:634565"],"synonyms":[{"name":"G1","type":"exact"},{"name":"grade 1","type":"exact"},{"name":"grade I","type":"exact"},{"name":"low grade","type":"exact"},{"name":"well differentiated","type":"exact"}],"termid":"MONDO:0024491","xrefs":{"Monarch":{"xref_id":"0024491"}}}


id: GO:0009633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete drought tolerance (obsolete GO:0009633)","synonyms":[{"name":"drought tolerance","type":"exact"}],"termid":"GO:0009633"}


id: MOD:00317
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["PubMed:3257009","RESID:AA0312","Unimod:433#K","PubMed:10717661","PubMed:4056688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-3,4-didehydroretinylidene-L-lysine","synonyms":[{"name":"(S)-2-amino-6-[(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexa-1,3-dien-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"},{"name":"3,4-didehydroretinylidene","type":"related"},{"name":"Didehydroretinylidene","type":"related"},{"name":"N6-(3,4-didehydroretinylidene)-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinal-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinyl-lysine","type":"exact"}],"termid":"MOD:00317"}


id: GO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).","definition_xrefs":["RHEA:22132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type maltose transporter activity","secondary_identifiers":["MetaCyc:ABC-16-RXN","EC:7.5.2.1"],"synonyms":[{"name":"ABC-type maltose transporter","type":"exact"},{"name":"ATP-dependent maltose transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled maltose transmembrane transporter activity","type":"related"},{"name":"maltooligosaccharide-importing ATPase activity","type":"related"},{"name":"maltose ABC transporter","type":"exact"},{"name":"maltose-transporting ATPase activity","type":"related"}],"termid":"GO:0015423"}


id: GO:0071971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an extracellular vesicular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Exosomes are defined by their size, which generally ranges from 30 nm to 100 nm.","definition_xrefs":["PMID:19442504","PMID:27462458","GOC:mah","GOC:tfm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"extracellular exosome biogenesis","termid":"GO:0097734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular exosome assembly","synonyms":[{"name":"extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:0071971"}


id: MONDO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic metabolic disorder characterized by excess urinary excretion of the purine base xanthine.","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"xanthinuria","secondary_identifiers":["NANDO:2200588","SCTID:190919008","UMLS:C0220988","ICD9:277.2","MEDGEN:450997","icd11.foundation:1565213608"],"termid":"MONDO:0000721","xrefs":{"Monarch":{"xref_id":"0000721"}}}


id: GO:0033138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation","termid":"GO:0033135"},{"relation_name":"positively_regulates","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-serine phosphorylation","termid":"GO:0033138"}


id: PBO:0076266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex interacting GAS6 enhancer non-coding RNA","termid":"PBO:0076266"}


id: GO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in the anterior lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell migration","termid":"GO:0048896"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration in anterior lateral line nerve","termid":"GO:0048912"}


id: GO:0097170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ADP-L-glycero-beta-D-manno-heptose metabolic process","synonyms":[{"name":"ADP-L-glycero-beta-D-manno-heptose metabolism","type":"exact"}],"termid":"GO:0097170"}


id: GO:1902768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprenoid via 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000092","GOC:mengo_curators","PMID:23746261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprenoid biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","synonyms":[{"name":"isoprenoid anabolism via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid biosynthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid formation via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid synthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"}],"termid":"GO:1902768"}


id: PBO:0047162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member B","termid":"PBO:0047162"}


id: MONDO:0041259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An myocarditis caused by infection with Corynebacterium diphtheriae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial myocarditis","termid":"MONDO:0001114"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"diphtheritic myocarditis","secondary_identifiers":["MEDGEN:509091","UMLS:C0152952","SCTID:26117009","icd11.foundation:1165221541"],"synonyms":[{"name":"Corynebacterium diphtheriae caused myocarditis","type":"exact"},{"name":"Corynebacterium diphtheriae myocarditis","type":"exact"},{"name":"diphtheritic myocarditis","type":"exact"}],"termid":"MONDO:0041259","xrefs":{"Monarch":{"xref_id":"0041259"}}}


id: GO:0033369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a location within a secretory granule in a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"part_of","term_name":"protein localization to mast cell secretory granule","termid":"GO:0033367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mast cell secretory granule","synonyms":[{"name":"establishment of protein localisation in mast cell secretory granule","type":"exact"},{"name":"establishment of protein localization in mast cell secretory granule","type":"exact"}],"termid":"GO:0033369"}


id: MONDO:0007698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hand-foot-genital syndrome (HFGS) is a very rare multiple congenital abnormality syndrome characterized by distal limb malformations and urogenital defects.","definition_xrefs":["Orphanet:2438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"hand-foot-genital syndrome","secondary_identifiers":["OMIM:140000","MedDRA:10072361","MESH:C535627","SCTID:702425002","UMLS:C1841679","DOID:0060739","GARD:2594","ICD9:759.89","MEDGEN:331103"],"synonyms":[{"name":"HFG","type":"related"},{"name":"HFG syndrome","type":"related"},{"name":"HFGS","type":"exact"},{"name":"HFU syndrome","type":"related"},{"name":"hand foot genital syndrome","type":"related"},{"name":"hand foot uterus syndrome","type":"related"},{"name":"hand-foot-genital syndrome","type":"exact"},{"name":"hand-foot-uterus syndrome","type":"exact"}],"termid":"MONDO:0007698","xrefs":{"Monarch":{"xref_id":"0007698"}}}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: PR:P17937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rlp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.06","synonyms":[{"name":"Spom972h-rlp7","type":"exact"}],"termid":"PR:P17937"}


id: GO:1902794
data:
  {"annotated_genes":["SJAG_03664","SJAG_04186","SJAG_04768","SJAG_04574","SJAG_01867","SJAG_01599","SJAG_02622","SJAG_03624","SJAG_02382","SJAG_03844","SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87848,91153,104555,110872,112500,116929],"is_not":false,"summary":null,"term":"GO:1902794"},{"annotations":[118147,100667,97541,118513,92224],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process independent of small interfering RNAs.","definition_xrefs":["PMID:24210919","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterochromatin island assembly","type":"exact"},{"name":"heterochromatin island formation","type":"exact"},{"name":"siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902794","terms_by_termid":{"GO:1902794":null,"GO:1902801":null}}


id: PBO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer associated ESR1 regulating natural antisense transcript 1","termid":"PBO:0040922"}


id: GO:0110129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A histone deacetylase complex formed by the association of an HP1 protein with a SHREC complex. The SHREC2 complex is required for deacetylation of H3K14, and mediates transcriptional gene silencing by limiting RNA polymerase II access to heterochromatin. In fission yeast, the complex contains the SHREC subunits Clr1, Clr2, Clr3, and Mit1, and the HP1 protein Chp2.","definition_xrefs":["GOC:mah","PMID:19111658"],"gene_count":0,"genotype_count":0,"name":"obsolete SHREC2 complex (obsolete GO:0110129)","termid":"GO:0110129"}


id: PBO:0089867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3","termid":"PBO:0089867"}


id: GO:0015316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrite/nitrate porter activity (obsolete GO:0015316)","synonyms":[{"name":"nitrite/nitrate porter activity","type":"exact"}],"termid":"GO:0015316"}


id: GO:1904676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of somatic stem cell division.","definition_xrefs":["GO_REF:0000058","GOC:BHF","PMID:19409607","GOC:rph","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell division","termid":"GO:1904675"},{"relation_name":"negatively_regulates","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somatic stem cell division","synonyms":[{"name":"down regulation of somatic stem cell division","type":"exact"},{"name":"down regulation of somatic stem cell renewal","type":"exact"},{"name":"down-regulation of somatic stem cell division","type":"exact"},{"name":"down-regulation of somatic stem cell renewal","type":"exact"},{"name":"downregulation of somatic stem cell division","type":"exact"},{"name":"downregulation of somatic stem cell renewal","type":"exact"},{"name":"inhibition of somatic stem cell division","type":"narrow"},{"name":"inhibition of somatic stem cell renewal","type":"narrow"},{"name":"negative regulation of somatic stem cell renewal","type":"exact"}],"termid":"GO:1904676"}


id: PBO:0055669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA in non-homologous end joining pathway 1","termid":"PBO:0055669"}


id: PBO:0040670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAN antisense RNA 2","termid":"PBO:0040670"}


id: GO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.","definition_xrefs":["GOC:go_curators","CL:0000540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration","secondary_identifiers":["Wikipedia:Neuron_migration","Wikipedia:Neural_development#Neuron_migration"],"synonyms":[{"name":"neuron chemotaxis","type":"exact"},{"name":"neuron guidance","type":"related"},{"name":"neuronal migration","type":"exact"}],"termid":"GO:0001764"}


id: MONDO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the pes.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete foot disorder (obsolete MONDO:0044989)","secondary_identifiers":["MESH:D005534","SCTID:118932009"],"synonyms":[{"name":"disease of pes","type":"exact"},{"name":"disease or disorder of pes","type":"exact"},{"name":"disorder of foot","type":"exact"},{"name":"disorder of pes","type":"exact"},{"name":"foot disease","type":"exact"},{"name":"pes disease","type":"exact"},{"name":"pes disease or disorder","type":"exact"}],"termid":"MONDO:0044989","xrefs":{"Monarch":{"xref_id":"0044989"}}}


id: MONDO:0007031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of abdominal aortic aneurysm that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"abdominal aortic aneurysm","termid":"MONDO:0005350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial abdominal aortic aneurysm","secondary_identifiers":["SCTID:715364001","OMIMPS:100070","Orphanet:86","GARD:9181","icd11.foundation:556590106","MEDGEN:896628","UMLS:C4275172"],"synonyms":[{"name":"aortic aneurysm, familial abdominal","type":"exact"},{"name":"hereditary abdominal aortic aneurysm","type":"exact"}],"termid":"MONDO:0007031","xrefs":{"Monarch":{"xref_id":"0007031"}}}


id: PBO:0063893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Q pseudogene 1","termid":"PBO:0063893"}


id: PBO:0027476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_monensin","termid":"PBO:0027476"}


id: GO:0033860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme NAD(P)H oxidase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NAD(P)H oxidase activity","termid":"GO:0033860"}


id: PBO:0058760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6884","termid":"PBO:0058760"}


id: PR:000027569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht1 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.1","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"hht1","type":"exact"}],"termid":"PR:000027569"}


id: PBO:0028899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028899"}


id: PBO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member A","termid":"PBO:0047159"}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: PBO:0072714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 1","termid":"PBO:0072714"}


id: MONDO:0021222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"},{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lacrimal gland neoplasm","secondary_identifiers":["UMLS:C0339124","MEDGEN:83280","NCIT:C4360"],"synonyms":[{"name":"lacrimal gland neoplasm (disease)","type":"exact"},{"name":"lacrimal gland tumor","type":"exact"},{"name":"lacrimal gland tumour","type":"exact"},{"name":"neoplasm of lacrimal gland","type":"exact"},{"name":"neoplasm of the lacrimal gland","type":"exact"},{"name":"tumor of lacrimal gland","type":"exact"},{"name":"tumor of the lacrimal gland","type":"exact"},{"name":"tumour of lacrimal gland","type":"exact"},{"name":"tumour of the lacrimal gland","type":"exact"}],"termid":"MONDO:0021222","xrefs":{"Monarch":{"xref_id":"0021222"}}}


id: SO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_cis_hydroxyisopentenyl_adenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_cis_hydroxyisopentenyl_adenosine","secondary_identifiers":["RNAMOD:009"],"synonyms":[{"name":"2-methylthio-N6-(cis-hydroxyisopentenyl) adenosine","type":"exact"},{"name":"ms2io6A","type":"exact"},{"name":"two methylthio N6 cis hydroxyisopentenyl adenosine","type":"exact"}],"termid":"SO:0001303"}


id: SO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 5S rRNA is an RNA component of the large subunit of cytosolic ribosomes in both prokaryotes and eukaryotes.","direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_5S_gene","termid":"SO:0002238"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_5S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/5S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 5S LSU rRNA","type":"exact"},{"name":"cytosolic 5S rRNA","type":"exact"},{"name":"cytosolic 5S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 5S","type":"exact"}],"termid":"SO:0000652"}


id: MONDO:0011927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tufted angioma is a very rare, benign, cutaneous, slow-growing, vascular tumor mostly developing in infancy or early childhood.","definition_xrefs":["Orphanet:1063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tufted angioma","secondary_identifiers":["ICDO:9161/0","HP:0012329","ICD9:215.9","NCIT:C4487","MEDGEN:83402","UMLS:C0346073","MESH:C536924","GARD:425","icd11.foundation:1994573217","OMIM:607859","SCTID:705155008"],"synonyms":[{"name":"Nakagawa angioblastoma","type":"exact"},{"name":"angioblastoma of Nakagawa","type":"exact"},{"name":"angioma tufted","type":"related"},{"name":"angioma, tufted","type":"related"},{"name":"tufted angioma","type":"exact"},{"name":"tufted angioma (disease)","type":"exact"},{"name":"tufted angioma of skin","type":"exact"},{"name":"tufted angioma of the skin","type":"exact"},{"name":"tufted hemangioma","type":"exact"},{"name":"tufted hemangioma of skin","type":"exact"},{"name":"tufted hemangioma of the skin","type":"exact"},{"name":"tufted skin angioma","type":"exact"}],"termid":"MONDO:0011927","xrefs":{"Monarch":{"xref_id":"0011927"}}}


id: MONDO:0021301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoma that involves the nipple.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"breast adenoma","termid":"MONDO:0002058"},{"relation_name":"is_a","term_name":"nipple neoplasm","termid":"MONDO:0002482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenoma of nipple","secondary_identifiers":["ICDO:8506/0","MEDGEN:137752","NCIT:C4192","SCTID:302829009","UMLS:C0334378"],"synonyms":[{"name":"adenoma of the nipple","type":"exact"},{"name":"nipple adenoma","type":"exact"},{"name":"papillomatosis, subareolar duct","type":"exact"},{"name":"subareolar duct papillomatosis","type":"related"}],"termid":"MONDO:0021301","xrefs":{"Monarch":{"xref_id":"0021301"}}}


id: PBO:0017455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-input_of","termid":"PBO:0017455"}


id: GO:0102602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 16beta-hydroxy-beta-amyrin + O2 + H+ + NAD(P)H = 12,13beta-epoxy-16beta-hydroxy-beta-amyrin + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome P450 dependent 16beta-hydroxy-beta-amyrin epoxidase activity (obsolete GO:0102602)","termid":"GO:0102602"}


id: PBO:0088308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein, lipocalin superfamily Svf2","termid":"PBO:0088308"}


id: PBO:0061019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 2","termid":"PBO:0061019"}


id: PBO:0080504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAPL cohesin release factor","termid":"PBO:0080504"}


id: PBO:0076572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 1","termid":"PBO:0076572"}


id: PBO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 18","termid":"PBO:0050316"}


id: PBO:0109011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 11, pseudogene","termid":"PBO:0109011"}


id: PBO:0081125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger homeobox 3","termid":"PBO:0081125"}


id: PBO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_degradation","termid":"PBO:0031681"}


id: PBO:0078872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 6","termid":"PBO:0078872"}


id: GO:1900967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methanophenazine metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of methanophenazine metabolic process","termid":"GO:1900965"},{"relation_name":"positively_regulates","term_name":"methanophenazine metabolic process","termid":"GO:1900629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methanophenazine metabolic process","synonyms":[{"name":"activation of methanophenazine metabolic process","type":"narrow"},{"name":"activation of methanophenazine metabolism","type":"exact"},{"name":"positive regulation of methanophenazine metabolism","type":"exact"},{"name":"up regulation of methanophenazine metabolic process","type":"exact"},{"name":"up regulation of methanophenazine metabolism","type":"exact"},{"name":"up-regulation of methanophenazine metabolic process","type":"exact"},{"name":"up-regulation of methanophenazine metabolism","type":"exact"},{"name":"upregulation of methanophenazine metabolic process","type":"exact"},{"name":"upregulation of methanophenazine metabolism","type":"exact"}],"termid":"GO:1900967"}


id: GO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac endothelial to mesenchymal trnasition.","definition_xrefs":["GOC:rph","PMID:26857067","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"},{"relation_name":"positively_regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0062000"}


id: MONDO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of spina bifida, characterized by any of several neural tube defects which may go undetected until an x-ray is performed. Treatment is symptomatic.","definition_xrefs":["NCIT:C101044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida","termid":"MONDO:0008449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spina bifida occulta","secondary_identifiers":["SCTID:76916001","UMLS:C0080174","icd11.foundation:449489594","Orphanet:645202","ICD9:756.17","MEDGEN:36380","DOID:0080073","GARD:10787","MESH:D016136","HP:0003298"],"synonyms":[{"name":"closed spinal dysraphism","type":"exact"},{"name":"spina bifida occulta","type":"exact"},{"name":"spina bifida occulta (disease)","type":"exact"}],"termid":"MONDO:0000859","xrefs":{"Monarch":{"xref_id":"0000859"}}}


id: PBO:0058096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4312","termid":"PBO:0058096"}


id: GO:0097367
data:
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id: GO:0009144
data:
  {"annotated_genes":["SJAG_02564","SJAG_02598","SJAG_02107","SJAG_04122","SJAG_03373","SJAG_06622","SJAG_03114","SJAG_02369","SJAG_02887","SJAG_00885","SJAG_00136","SJAG_00133","SJAG_02009","SJAG_01471","SJAG_04334","SJAG_02135","SJAG_00461","SJAG_04422","SJAG_07003","SJAG_02945","SJAG_05204","SJAG_00839","SJAG_03828","SJAG_03660","SJAG_04487","SJAG_04495","SJAG_06621","SJAG_03903","SJAG_04192","SJAG_02785","SJAG_01310","SJAG_03925","SJAG_04048","SJAG_04849","SJAG_00985","SJAG_MIT37","SJAG_02105","SJAG_02038","SJAG_05314","SJAG_MIT09","SJAG_MIT15","SJAG_00605","SJAG_00027","SJAG_00438","SJAG_00542","SJAG_02796","SJAG_00685","SJAG_00915","SJAG_00836","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59508,67777,67858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[106199,103750,109773,116741,105829,94886,109775,98352,109774,95380,98622,105827,109770,109776,78220,104006,105828,109771,109772,106198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[99347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[88960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[102598,75230,64652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[73430,76393],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[118396],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[95209,93641,109169,104018,102180,104044,103400,119468,119462,108276,94230,108184,116235,89486,105382,93214,119456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[107629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[70471],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009144","terms_by_termid":{"GO:0006110":null,"GO:0006183":null,"GO:0009216":null,"GO:0035863":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: PATO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated yellow","synonyms":[{"name":"bright yellow","type":"related"}],"termid":"PATO:0001285"}


id: GO:0019093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial RNA localization","synonyms":[{"name":"establishment and maintenance of mitochondrial RNA localization","type":"exact"},{"name":"mitochondrial RNA localisation","type":"exact"},{"name":"mtRNA localization","type":"exact"}],"termid":"GO:0019093"}


id: PBO:0087925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that regulates the pleiotropic drug response; zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes; relocalizes to the cytosol in response to hypoxia; PDR1 has a paralog, PDR3, that arose from the whole genome duplication","termid":"PBO:0087925"}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: PBO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member F, pseudogene","termid":"PBO:0048880"}


id: PBO:0088094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uncharacterized protein of unknown function","termid":"PBO:0088094"}


id: GO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast development","termid":"GO:0048884"},{"relation_name":"part_of","term_name":"anterior lateral line development","termid":"GO:0048899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast development","termid":"GO:0048901"}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_02074","SJAG_02607","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103688,115414,110946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0007049","GO:0044085","GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: PBO:0082732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; involved in transcriptional regulation of PHO5; affects termination of snoRNAs and cryptic unstable transcripts (CUTs); C-terminus shares significant sequence identity with the human candidate tumor suppressor p33-ING1 and its isoform ING3","termid":"PBO:0082732"}


id: GO:0000930
data:
  {"annotated_genes":["SJAG_02431","SJAG_07018","SJAG_01215","SJAG_03835","SJAG_00856","SJAG_01756","SJAG_02609","SJAG_02886"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117579,100444,109976,110959,79396,101342,98002,106818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000931"},{"annotations":[110960,101343,109223,109977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species.","definition_xrefs":["GOC:clt","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02431":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"gamma-tubulin complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000930","terms_by_termid":{"GO:0000931":null,"GO:0008275":null}}


id: PR:Q09933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dis1 gene.","definition_xrefs":["UniProtKB:Q09933","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein p93 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom972h-dis1","type":"exact"}],"termid":"PR:Q09933"}


id: MONDO:0019713
data:
  {"annotated_genes":["SJAG_01852","SJAG_04995","SJAG_00796","SJAG_01067","SJAG_02200","SJAG_03484","SJAG_01831","SJAG_05019","SJAG_04092"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86502,86503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"},{"annotations":[85908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007387"},{"annotations":[87390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010370"},{"annotations":[86048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012555"},{"annotations":[86506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013864"},{"annotations":[85925,85926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[87445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_01831":null,"SJAG_01852":null,"SJAG_02200":null,"SJAG_03484":null,"SJAG_04092":null,"SJAG_04995":null,"SJAG_05019":null},"genotype_count":0,"is_obsolete":false,"name":"non-syndromic limb reduction defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680277","MEDGEN:1842256","GARD:19210","Orphanet:93457"],"synonyms":[{"name":"isolated limb reduction defect","type":"related"},{"name":"non-syndromic limb hypoplasia","type":"exact"},{"name":"nonsyndromic limb reduction defect","type":"exact"}],"termid":"MONDO:0019713","terms_by_termid":{"MONDO:0007387":null,"MONDO:0009955":null,"MONDO:0010121":null,"MONDO:0010370":null,"MONDO:0012555":null,"MONDO:0013864":null,"MONDO:0013895":null},"xrefs":{"Monarch":{"xref_id":"0019713"}}}


id: PATO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A height which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"height","termid":"PATO:0000119"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased height","synonyms":[{"name":"tall","type":"related"}],"termid":"PATO:0000570"}


id: PBO:0004440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1 (predicted)","termid":"PBO:0004440"}


id: PBO:0077633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 1","termid":"PBO:0077633"}


id: GO:0018673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzoyl-CoA + 2 NADPH + 2 H+ + O2 = 2-amino-5-oxocyclohex-1-enecarboxyl-CoA + H2O + 2 NADP+.","definition_xrefs":["EC:1.14.13.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthraniloyl-CoA monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0568","MetaCyc:ANTHRANILOYL-COA-MONOOXYGENASE-RXN"],"synonyms":[{"name":"2-aminobenzoyl-CoA monooxygenase/reductase activity","type":"related"},{"name":"2-aminobenzoyl-CoA,NAD(P)H:oxygen oxidoreductase (de-aromatizing)","type":"related"},{"name":"anthraniloyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0018673"}


id: MONDO:0800174
data:
  {"annotated_genes":["SJAG_01013","SJAG_01433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030334"},{"annotations":[87719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032742"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing encephalitis, acute, infection-induced.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01433":null},"genotype_count":0,"is_obsolete":false,"name":"encephalitis, acute, infection-induced, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800174","terms_by_termid":{"MONDO:0030334":null,"MONDO:0032742":null},"xrefs":{"Monarch":{"xref_id":"0800174"}}}


id: PBO:0005199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIE beta subunit, TFIIEB, Tfa2","termid":"PBO:0005199"}


id: MONDO:0006759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuropathy of the femoral nerve.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"femoral neuropathy","secondary_identifiers":["SCTID:25690000","MEDGEN:148421","ICD9:355.2","UMLS:C0751931","NCIT:C27595","DOID:4196","MESH:D020428"],"synonyms":[{"name":"femoral nerve dysfunction","type":"exact"},{"name":"femoral nerve lesions","type":"exact"},{"name":"femoral nerve peripheral nerve lesion","type":"exact"},{"name":"peripheral nerve lesion of femoral nerve","type":"exact"}],"termid":"MONDO:0006759","xrefs":{"Monarch":{"xref_id":"0006759"}}}


id: MONDO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electroclinical syndrome with onset in adolescence and adulthood.","definition_xrefs":["DOID:0050705","PMID:20196795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"adolescence-adult electroclinical syndrome","termid":"MONDO:0000415","xrefs":{"Monarch":{"xref_id":"0000415"}}}


id: MONDO:0021439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pituitary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of pituitary gland","secondary_identifiers":["MEDGEN:141679","ICD10CM:D35.2","SCTID:92296004","NCIT:C4782","UMLS:C0496901","DOID:60009","icd11.foundation:1871539651"],"synonyms":[{"name":"benign neoplasm of pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary gland","type":"exact"},{"name":"benign pituitary gland neoplasm","type":"exact"},{"name":"benign pituitary gland tumor","type":"exact"},{"name":"benign pituitary gland tumour","type":"exact"},{"name":"benign pituitary neoplasm","type":"exact"},{"name":"benign pituitary tumor","type":"exact"},{"name":"benign pituitary tumour","type":"exact"},{"name":"benign tumor of pituitary","type":"exact"},{"name":"benign tumor of pituitary gland","type":"exact"},{"name":"benign tumor of the pituitary","type":"exact"},{"name":"benign tumor of the pituitary gland","type":"exact"},{"name":"benign tumour of pituitary","type":"exact"},{"name":"benign tumour of pituitary gland","type":"exact"},{"name":"benign tumour of the pituitary","type":"exact"},{"name":"benign tumour of the pituitary gland","type":"exact"},{"name":"pituitary gland benign neoplasm","type":"exact"},{"name":"pituitary neoplasms, benign","type":"exact"},{"name":"pituitary tumor, benign","type":"exact"}],"termid":"MONDO:0021439","xrefs":{"Monarch":{"xref_id":"0021439"}}}


id: GO:1904416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xenophagy.","definition_xrefs":["PMID:21617041","GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of xenophagy","termid":"GO:1904415"},{"relation_name":"negatively_regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of xenophagy","synonyms":[{"name":"down regulation of xenophagy","type":"exact"},{"name":"down-regulation of xenophagy","type":"exact"},{"name":"downregulation of xenophagy","type":"exact"},{"name":"inhibition of xenophagy","type":"narrow"}],"termid":"GO:1904416"}


id: PBO:0046582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 24","termid":"PBO:0046582"}


id: MONDO:0042969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 12q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 12. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 12q duplication include developmental delay, intellectual disability, behavioral problems, growth delay, and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 12","termid":"MONDO:0042968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 12","secondary_identifiers":["MESH:C538300","GARD:1926","UMLS:C0795846","MEDGEN:208641"],"synonyms":[{"name":"12q duplication","type":"related"},{"name":"12q trisomy","type":"related"},{"name":"Duplication 12q","type":"related"},{"name":"chromosome 12q duplication","type":"related"},{"name":"partial trisomy 12q","type":"related"},{"name":"trisomy 12q","type":"related"}],"termid":"MONDO:0042969","xrefs":{"Monarch":{"xref_id":"0042969"}}}


id: PBO:0075335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 3","termid":"PBO:0075335"}


id: PBO:0080428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 12","termid":"PBO:0080428"}


id: GO:1904066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in dauer larval development.","definition_xrefs":["GOC:kmv","PMID:22665789","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in dauer larval development","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signaling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signalling pathway involved in dauer larval development","type":"exact"}],"termid":"GO:1904066"}


id: GO:0000032
data:
  {"annotated_genes":["SJAG_03082","SJAG_00816","SJAG_01264","SJAG_02519","SJAG_04770","SJAG_00598","SJAG_04906","SJAG_01276","SJAG_01021"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72461,74940,75169,77442,77988,78395,79715,80793,87854],"is_not":false,"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall mannoproteins, any cell wall protein that contains covalently bound mannose residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein biosynthetic process","termid":"GO:0006057"},{"relation_name":"is_a","term_name":"cell wall glycoprotein biosynthetic process","termid":"GO:0031506"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall mannoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall mannoprotein anabolism","type":"exact"},{"name":"cell wall mannoprotein biosynthesis","type":"exact"},{"name":"cell wall mannoprotein formation","type":"exact"},{"name":"cell wall mannoprotein synthesis","type":"exact"}],"termid":"GO:0000032","terms_by_termid":{"GO:0000032":null}}


id: MOD:00046
data:
  {"annotated_genes":["SJAG_03012","SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[119857,119858,80893,80894,119912,119913,119914,119915],"is_not":false,"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.","definition_xrefs":["PubMed:12923550","ChEBI:15811","DeltaMass:0","RESID:AA0037","PubMed:8061611","PubMed:4065410","Unimod:21#S","OMSSA:6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 166.98-167.00 Da","termid":"MOD:00771"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-serine","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroxypropanoic acid 3-phosphate","type":"exact"},{"name":"2-azanyl-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"ACT_SITE Phosphoserine intermediate","type":"exact"},{"name":"MOD_RES Phosphoserine","type":"exact"},{"name":"O-phospho-L-serine","type":"exact"},{"name":"O-phosphonoserine","type":"exact"},{"name":"O-phosphorylated L-serine","type":"exact"},{"name":"O3-phosphoserine","type":"exact"},{"name":"OPSer","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Seryl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylations","type":"exact"},{"name":"serine phosphate ester","type":"exact"}],"termid":"MOD:00046","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0081376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 214","termid":"PBO:0081376"}


id: PBO:0034575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_HMW_SUMO_conjugate_level","termid":"PBO:0034575"}


id: PBO:0048600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin and obestatin prepropeptide","termid":"PBO:0048600"}


id: GO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate.","definition_xrefs":["EC:3.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"arylesterase activity","secondary_identifiers":["RHEA:17309","UM-BBD_reactionID:r0757","MetaCyc:ARYLESTERASE-RXN"],"synonyms":[{"name":"A-esterase activity","type":"broad"},{"name":"aromatic esterase","type":"narrow"},{"name":"aryl-ester hydrolase","type":"narrow"},{"name":"paraoxonase activity","type":"broad"}],"termid":"GO:0004064"}


id: PBO:0059656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 22","termid":"PBO:0059656"}


id: PBO:0081441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 296","termid":"PBO:0081441"}


id: GO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased.","definition_xrefs":["GOC:mtg_cardio","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure","synonyms":[{"name":"activation of blood pressure","type":"narrow"},{"name":"stimulation of blood pressure","type":"narrow"},{"name":"up regulation of blood pressure","type":"exact"},{"name":"up-regulation of blood pressure","type":"exact"},{"name":"upregulation of blood pressure","type":"exact"}],"termid":"GO:0045777"}


id: MONDO:0022742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Asthma attacks caused, triggered, or exacerbated by OCCUPATIONAL EXPOSURE.","definition_xrefs":["MESH:D059366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupational asthma","secondary_identifiers":["MEDGEN:452342","DOID:0080820","UMLS:C0264423","SCTID:57607007"],"synonyms":[{"name":"Asthma, Occupational","type":"related"},{"name":"Asthmas, Occupational","type":"related"},{"name":"Industrial asthma","type":"related"},{"name":"Occupational Asthma","type":"related"},{"name":"Occupational Asthmas","type":"related"},{"name":"Occupational asthma","type":"related"},{"name":"industrial asthma","type":"related"},{"name":"occupational asthma","type":"exact"}],"termid":"MONDO:0022742","xrefs":{"Monarch":{"xref_id":"0022742"}}}


id: MONDO:0008982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary macular disorder, usually presenting between the ages of 30-60, characterized by a large area of atrophy in the center of the macula and the loss or absence of photoreceptors, retinal pigment epithelium and choriocapillaris in this area, resulting in a progressive decrease in visual acuity.","definition_xrefs":["Orphanet:75377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central areolar choroidal dystrophy","secondary_identifiers":["ICD9:363.54","icd11.foundation:2018537024","MEDGEN:283932","NANDO:1200939","OMIMPS:215500","SCTID:231996009","SCTID:312918002","GARD:10049","UMLS:C1536451","MESH:C535358"],"synonyms":[{"name":"CACD","type":"exact"},{"name":"CACD1","type":"related"},{"name":"areolar atrophy of the macula","type":"exact"},{"name":"central areolar choroidal sclerosis","type":"exact"},{"name":"choroidal dystrophy","type":"exact"},{"name":"choroidal dystrophy central areolar","type":"related"},{"name":"choroidal dystrophy, central areolar, 1","type":"related"}],"termid":"MONDO:0008982","xrefs":{"Monarch":{"xref_id":"0008982"}}}


id: MONDO:0010560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked cleft palate and ankyloglossia is a rare, genetic developmental defect during embryogenesis syndrome characterized by the association of complete, partial or submucous cleft palate and ankyloglossia. Patients may also present abnormal uvula (e.g. absent, bifid, shortened or laterally deviated), short lingual frenulum and dental anomalies (e.g. buccal crossbite, absent and/or misshapen teeth). Digital abnormalities, such as mild clinodactyly and/or syndactyly, have also been reported.","definition_xrefs":["Orphanet:324601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate with or without ankyloglossia, X-linked","secondary_identifiers":["DOID:0060613","MESH:C536426","OMIM:303400","GARD:1394","UMLS:C1844830","MEDGEN:375520","SCTID:766761000"],"synonyms":[{"name":"CPX","type":"related"},{"name":"X-linked cleft palate","type":"related"},{"name":"X-linked cleft palate and ankyloglossia","type":"exact"},{"name":"cleft palate X-linked","type":"related"},{"name":"cleft palate with ankyloglossia","type":"exact"},{"name":"cleft palate with or without ankyloglossia, X-linked","type":"exact"},{"name":"cleft palate, X-linked","type":"related"}],"termid":"MONDO:0010560","xrefs":{"Monarch":{"xref_id":"0010560"}}}


id: PBO:0049640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 43","termid":"PBO:0049640"}


id: GO:0015925
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of galactosyl compounds, substances containing a group derived from a cyclic form of galactose or a galactose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactosidase activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0015925","terms_by_termid":{"GO:0004557":null}}


id: PBO:0071004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 6","termid":"PBO:0071004"}


id: PBO:0086773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cell periphery","termid":"PBO:0086773"}


id: GO:0140231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neurotransmitter receptor complex along microtubules from the cell body toward the cell periphery in nerve cell axons.","definition_xrefs":["PMID:28680963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"},{"relation_name":"is_a","term_name":"anterograde axonal protein transport","termid":"GO:0099641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterograde axonal transport of neurotransmitter receptor complex","termid":"GO:0140231"}


id: MONDO:0017308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hypothesized form of Marfan; dubious","gene_count":0,"genotype_count":0,"name":"obsolete Marfan syndrome type 2 (obsolete MONDO:0017308)","secondary_identifiers":["MESH:C535911","NCIT:C75007","Orphanet:284973"],"synonyms":[{"name":"MFS2","type":"exact"},{"name":"Marfan syndrome type II","type":"exact"}],"termid":"MONDO:0017308","xrefs":{"Monarch":{"xref_id":"0017308"}}}


id: PBO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup132","termid":"PBO:0001723"}


id: MONDO:0005259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder most often diagnosed in the pediatric years in which the individual displays marked impairment in social interaction and a repetitive, stereotyped pattern of behavior. The individual, however, displays no delay in language or cognitive development, which differentiates Asperger Syndrome from autism.","definition_xrefs":["NCIT:C97159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autism spectrum disorder","termid":"MONDO:0005258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Asperger syndrome","secondary_identifiers":["SCTID:23560001","icd11.foundation:366940030","MESH:D020817","MEDGEN:68633","UMLS:C0236792","EFO:0003757","DOID:0050432","Orphanet:1162"],"synonyms":[{"name":"ASPG","type":"broad"},{"name":"asperger syndrome, susceptibility to","type":"related"},{"name":"autism spectrum disorder without disorder of intellectual development and with mild or no impairment of functional language","type":"exact"}],"termid":"MONDO:0005259","xrefs":{"Monarch":{"xref_id":"0005259"}}}


id: PBO:0063080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 2","termid":"PBO:0063080"}


id: PBO:0065867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB24, member RAS oncogene family","termid":"PBO:0065867"}


id: PBO:0018202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane zinc transmembrane transporter (predicted)","termid":"PBO:0018202"}


id: MONDO:1010493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, cattle","secondary_identifiers":["OMIA:001041-9913"],"termid":"MONDO:1010493","xrefs":{"Monarch":{"xref_id":"1010493"}}}


id: SO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the translational product with respect to the reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_change_of_translational_product_variant","synonyms":[{"name":"complex change of translational product variant","type":"exact"}],"termid":"SO:0001602"}


id: GO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell trailing edge","synonyms":[{"name":"back of cell","type":"exact"},{"name":"trailing edge","type":"exact"}],"termid":"GO:0031254"}


id: GO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-neomenthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["RHEA:23812","EC:1.1.1.208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-neomenthol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02548","MetaCyc:+-NEOMENTHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-neomenthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047501"}


id: PBO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A7","termid":"PBO:0050479"}


id: GO:0071955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from recycling endosomes to the Golgi.","definition_xrefs":["GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"recycling endosome to Golgi transport","termid":"GO:0071955"}


id: PBO:0069698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 977, pseudogene","termid":"PBO:0069698"}


id: GO:0019432
data:
  {"annotated_genes":["SJAG_02763","SJAG_03162","SJAG_03609","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71670,74926,77340,90390],"is_not":false,"summary":null,"term":"GO:0019432"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75109","MetaCyc:TRIGLSYN-PWY"],"synonyms":[{"name":"triacylglycerol biosynthesis","type":"exact"},{"name":"triacylglycerol biosynthetic process","type":"exact"},{"name":"triglyceride anabolism","type":"exact"},{"name":"triglyceride biosynthesis","type":"exact"},{"name":"triglyceride formation","type":"exact"},{"name":"triglyceride synthesis","type":"exact"}],"termid":"GO:0019432","terms_by_termid":{"GO:0019432":null}}


id: GO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which chloride ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloride channel complex","termid":"GO:0034707"}


id: GO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scopoletin + UDP-D-glucose = H+ + scopolin + UDP.","definition_xrefs":["EC:2.4.1.128","RHEA:20453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"scopoletin glucosyltransferase activity","secondary_identifiers":["MetaCyc:SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03594"],"synonyms":[{"name":"SGTase activity","type":"related"},{"name":"UDP-glucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-scopoletin glucosyltransferase activity","type":"related"}],"termid":"GO:0050275"}


id: PBO:0057369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ak","termid":"PBO:0057369"}


id: PBO:0086937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTP-binding protein; contains the PEST signal sequence specific for proteolytic enzymes; may be involved in vesicular transport; overexpression leads to accumulation of Golgi-like cisternae with budding vesicles","termid":"PBO:0086937"}


id: GO:0047136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(dimethylamino)azobenzene + H2O + NADP+ = 4-(dimethylamino)phenylazoxybenzene + H+ + NADPH.","definition_xrefs":["RHEA:19789","EC:1.7.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-(dimethylamino)phenylazoxybenzene reductase activity","secondary_identifiers":["KEGG_REACTION:R04303","MetaCyc:1.6.6.12-RXN"],"synonyms":[{"name":"4-(dimethylamino)phenylazobenzene:NADP+ oxidoreductase activity","type":"related"},{"name":"N,N-dimethyl-p-aminoazobenzene oxide reductase activity","type":"related"},{"name":"NADPH-dependent DMAB N-oxide reductase activity","type":"related"},{"name":"NADPH2:4-(dimethylamino)phenylazoxybenzene oxidoreductase activity","type":"related"},{"name":"NADPH:4-(dimethylamino)phenylazoxybenzene oxidoreductase activity","type":"related"},{"name":"dimethylaminoazobenzene N-oxide reductase activity","type":"related"}],"termid":"GO:0047136"}


id: PBO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme (predicted)","termid":"PBO:0002287"}


id: MONDO:0012543
data:
  {"annotated_genes":["SJAG_02848","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86036,86037],"is_not":false,"summary":null,"term":"MONDO:0012543"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"optic atrophy 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10201","MEDGEN:377837","MESH:C537126","OMIM:610708","UMLS:C1853139","DOID:0111438"],"synonyms":[{"name":"OPA5","type":"exact"},{"name":"optic atrophy 5","type":"exact"}],"termid":"MONDO:0012543","terms_by_termid":{"MONDO:0012543":null},"xrefs":{"Monarch":{"xref_id":"0012543"}}}


id: GO:1903519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:dph","PMID:23164222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland involution","termid":"GO:1903519"}


id: PBO:0060131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 32","termid":"PBO:0060131"}


id: MONDO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the ulnar nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"ulnar neuropathy","termid":"MONDO:0007006"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ulnar nerve lesion","secondary_identifiers":["SCTID:367475009","UMLS:C1288279","DOID:12168","MEDGEN:710723","ICD9:354.2"],"synonyms":[{"name":"lesion of ulnar nerve","type":"exact"},{"name":"peripheral nerve lesion of ulnar nerve","type":"exact"},{"name":"ulnar nerve peripheral nerve lesion","type":"exact"}],"termid":"MONDO:0001458","xrefs":{"Monarch":{"xref_id":"0001458"}}}


id: GO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of dopamine into a presynaptic neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine uptake involved in synaptic transmission","termid":"GO:0051584"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051945"},{"relation_name":"negatively_regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"down regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"down-regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"downregulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"negative regulation of dopamine import involved in synaptic transmission","type":"exact"}],"termid":"GO:0051585"}


id: MONDO:0006790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A regressive change of teeth characterized by excessive development of secondary cementum on the tooth surface. It may occur on any part of the root, but the apical two-thirds are most commonly affected. (Dorland, 27th ed)","definition_xrefs":["MESH:D006936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercementosis","secondary_identifiers":["DOID:12733","ICD10CM:K03.4","SCTID:78537008","MEDGEN:9360","EFO:1000970","ICD9:521.5","MedDRA:10020596","UMLS:C0020441"],"synonyms":[{"name":"cementation hyperplasia","type":"exact"}],"termid":"MONDO:0006790","xrefs":{"Monarch":{"xref_id":"0006790"}}}


id: MONDO:0040732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pseudomonas infection","termid":"MONDO:0005141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudomonas aeruginosa infectious disease","secondary_identifiers":["UMLS:C0276075","SCTID:11218009","MEDGEN:547066"],"synonyms":[{"name":"infection caused by Pseudomonas aeruginosa","type":"related"},{"name":"infection due to Pseudomonas aeruginosa","type":"exact"}],"termid":"MONDO:0040732","xrefs":{"Monarch":{"xref_id":"0040732"}}}


id: MONDO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cutaneous lesion presenting as a scaly verrucous plaque. Morphologically, the plaque contains nests of basaloid cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"Borst-Jadassohn intraepidermal carcinoma","secondary_identifiers":["ICDO:8096/0","MEDGEN:424845","NCIT:C4110","SCTID:403886007","UMLS:C2937231","DOID:7039"],"synonyms":[{"name":"Bowen's disease, clonal","type":"exact"},{"name":"intraepidermal epithelioma of Jadassohn","type":"exact"}],"termid":"MONDO:0004083","xrefs":{"Monarch":{"xref_id":"0004083"}}}


id: PBO:0069666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 943, pseudogene","termid":"PBO:0069666"}


id: GO:0033551
data:
  {"annotated_genes":["SJAG_00207","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69441,112068],"is_not":false,"summary":null,"term":"GO:0033551"}]},"cv_name":"cellular_component","definition":"A protein complex required for clamping microtubule binding sites, ensuring orientation of sister kinetochores to the same pole (mono-orientation) during meiosis I. In the yeast S. cerevisiae this complex consists of Csm1p, Lrs4p, Hrr25p and Mam1p; in S. pombe Psc1 and Mde4 have been identified as subunits.","definition_xrefs":["GOC:rb","PMID:17627824","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991","GO:0000776"],"is_obsolete":false,"name":"monopolin complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"Pcs1/Mde4 complex","type":"narrow"},{"name":"monopolin subcomplex Csm1/Lrs4","type":"narrow"}],"termid":"GO:0033551","terms_by_termid":{"GO:0033551":null}}


id: GO:1903267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["PMID:12679340","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"negatively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ornithine catabolic process","synonyms":[{"name":"down regulation of ornithine breakdown","type":"exact"},{"name":"down regulation of ornithine catabolic process","type":"exact"},{"name":"down regulation of ornithine catabolism","type":"exact"},{"name":"down regulation of ornithine degradation","type":"exact"},{"name":"down-regulation of ornithine breakdown","type":"exact"},{"name":"down-regulation of ornithine catabolic process","type":"exact"},{"name":"down-regulation of ornithine catabolism","type":"exact"},{"name":"down-regulation of ornithine degradation","type":"exact"},{"name":"downregulation of ornithine breakdown","type":"exact"},{"name":"downregulation of ornithine catabolic process","type":"exact"},{"name":"downregulation of ornithine catabolism","type":"exact"},{"name":"downregulation of ornithine degradation","type":"exact"},{"name":"inhibition of ornithine breakdown","type":"narrow"},{"name":"inhibition of ornithine catabolic process","type":"narrow"},{"name":"inhibition of ornithine catabolism","type":"narrow"},{"name":"inhibition of ornithine degradation","type":"narrow"},{"name":"negative regulation of ornithine breakdown","type":"exact"},{"name":"negative regulation of ornithine catabolism","type":"exact"},{"name":"negative regulation of ornithine degradation","type":"exact"}],"termid":"GO:1903267"}


id: PBO:0067354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 452, pseudogene","termid":"PBO:0067354"}


id: MONDO:0016239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystinosis is a metabolic disease characterized by an accumulation of cystine inside the lysosomes, causing damage in different organs and tissues, particularly in the kidneys and eyes. Three clinical forms have been described: nephropathic infantile, nephropathic juvenile and ocular.","definition_xrefs":["Orphanet:213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysosomal amino acid transport","termid":"MONDO:0019246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"cystinosis","secondary_identifiers":["icd11.foundation:733715856","MEDGEN:1384792","GARD:6236","NANDO:2200571","NORD:1028","DOID:1064","UMLS:C4316899","NANDO:1200161","SCTID:190681003","MedDRA:10011777","MESH:D003554","ICD10CM:E72.04","NCIT:C2976"],"synonyms":[{"name":"Cystinoses","type":"related"},{"name":"Protein defect of cystin transport","type":"exact"},{"name":"cystine diathesis","type":"related"},{"name":"cystine disease","type":"related"},{"name":"cystine storage disease","type":"exact"},{"name":"cystinosis","type":"exact"}],"termid":"MONDO:0016239","xrefs":{"Monarch":{"xref_id":"0016239"}}}


id: SO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 4 modification where the modification is the acetylation of the residue.","definition_xrefs":["EBI:nj","SO:ke","ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_4_acetylation_site","synonyms":[{"name":"H4ac","type":"exact"},{"name":"histone 4 acetylation site","type":"exact"}],"termid":"SO:0001972"}


id: GO:2001227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to quercitrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quercitrin binding","termid":"GO:2001227"}


id: PBO:0067807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 109","termid":"PBO:0067807"}


id: PR:O36021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CCAAT/enhancer-binding protein zeta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02012","PANTHER:PTHR12048:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.09c","secondary_identifiers":["UniProtKB:O36021"],"synonyms":[{"name":"Spom972h-CEBPZ","type":"exact"}],"termid":"PR:O36021"}


id: PBO:0041727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II delta","termid":"PBO:0041727"}


id: PBO:0044083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A2","termid":"PBO:0044083"}


id: GO:0008636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of the activity of a caspase, a group of cysteine proteases involved in apoptosis, by the addition of a phosphate group.","definition_xrefs":["GOC:dph","GOC:jl","PMID:14744432","GOC:tb","Wikipedia:Caspase"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of caspase activity by protein phosphorylation (obsolete GO:0008636)","synonyms":[{"name":"activation of caspase activity by protein amino acid phosphorylation","type":"exact"},{"name":"activation of caspase activity by protein phosphorylation","type":"exact"},{"name":"caspase activation via phosphorylation","type":"exact"}],"termid":"GO:0008636"}


id: PBO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.9","termid":"PBO:0001509"}


id: FYPO:0002726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of saccharopine dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal saccharopine dehydrogenase activity","termid":"FYPO:0002726"}


id: MOD:00510
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc","definition_xrefs":["PubMed:1694179","PubMed:111247","Unimod:142","PubMed:5490222","RESID:AA0151#var","OMSSA:183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc1dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(1)","type":"related"},{"name":"HexNAc1dHex1","type":"related"},{"name":"dHexHexNAcN","type":"exact"}],"termid":"MOD:00510"}


id: MONDO:0975805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"foveal hypoplasia","termid":"MONDO:0044203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveal hypoplasia 3","secondary_identifiers":["OMIM:620958"],"termid":"MONDO:0975805","xrefs":{"Monarch":{"xref_id":"0975805"}}}


id: PBO:0058618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6750","termid":"PBO:0058618"}


id: MONDO:0007865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knuckle pads","secondary_identifiers":["ICD10CM:M72.1","SCTID:16687001","MEDGEN:78103","UMLS:C0264000","icd11.foundation:1824875472","ICD9:728.79","OMIM:149100"],"synonyms":[{"name":"knuckle pads","type":"exact"}],"termid":"MONDO:0007865","xrefs":{"Monarch":{"xref_id":"0007865"}}}


id: GO:0000389
data:
  {"annotated_genes":["SJAG_01214","SJAG_00225"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73510,101609],"is_not":false,"summary":null,"term":"GO:0000389"}]},"cv_name":"biological_process","definition":"Recognition of the intron 3'-splice site by components of the assembling U2- or U12-type spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splice site recognition","termid":"GO:0006376"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00225":null,"SJAG_01214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0010467","GO:0044085","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA 3'-splice site recognition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000383","GO:0000382"],"synonyms":[{"name":"U12-type nuclear mRNA 3'-splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 3'-splice site recognition","type":"narrow"},{"name":"nuclear mRNA 3'-splice site recognition","type":"exact"}],"termid":"GO:0000389","terms_by_termid":{"GO:0000389":null}}


id: GO:0098025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multiprotein component at the distal (head) end of the virus tail to which fibers of tailed viruses may be attached.","definition_xrefs":["GOC:bm","VZ:3957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, baseplate","synonyms":[{"name":"bacteriophage baseplate","type":"narrow"},{"name":"tail structure","type":"related"},{"name":"tail tip","type":"related"}],"termid":"GO:0098025"}


id: PBO:0013451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YOR074C qualifier=SPAC15E1.04,C-term","termid":"PBO:0013451"}


id: GO:1900954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 18-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900953"},{"relation_name":"negatively_regulates","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 18-methylnonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of 18-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of 18-methylnonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900954"}


id: PBO:0082394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase; forms a tetramer with Frs2p to generate active enzyme; able to hydrolyze mis-aminoacylated tRNA-Phe, which could contribute to translational quality control","termid":"PBO:0082394"}


id: MONDO:0005495
data:
  {"annotated_genes":["SJAG_03429","SJAG_00260","SJAG_04270","SJAG_01036","SJAG_01895","SJAG_02398","SJAG_01671","SJAG_03920","SJAG_02148","SJAG_04312","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009025"},{"annotations":[87606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[85930,85929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[86206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014359"}]},"cv_name":"mondo","definition":"A disease involving the adrenal gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01036":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02148":null,"SJAG_02398":null,"SJAG_02696":null,"SJAG_03429":null,"SJAG_03920":null,"SJAG_04270":null,"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"adrenal gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:892577","ICD9:255","ICD9:255.9","UMLS:C4021794","DOID:9553","ICD9:255.8","NCIT:C26690","EFO:0005539","MESH:D000307","SCTID:30171000"],"synonyms":[{"name":"adrenal gland disease","type":"exact"},{"name":"adrenal gland disease or disorder","type":"exact"},{"name":"adrenal gland diseases","type":"exact"},{"name":"adrenal gland disorder","type":"exact"},{"name":"adrenal gland disorders","type":"exact"},{"name":"disease of adrenal gland","type":"exact"},{"name":"disease or disorder of adrenal gland","type":"exact"},{"name":"disorder of adrenal gland","type":"exact"}],"termid":"MONDO:0005495","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0009025":null,"MONDO:0009050":null,"MONDO:0011121":null,"MONDO:0011503":null,"MONDO:0011544":null,"MONDO:0013310":null,"MONDO:0013602":null,"MONDO:0014359":null},"xrefs":{"Monarch":{"xref_id":"0005495"}}}


id: PATO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"old","termid":"PATO:0000308"}


id: PBO:0056425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis regulator and mRNA stability factor 1","termid":"PBO:0056425"}


id: GO:0010850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions within the cell that occur as a result of a single trigger reaction or compound interacting with a chemoreceptor resulting in a modulation of the force with which blood travels through the circulatory system. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of blood pressure by chemoreceptor signaling pathway","synonyms":[{"name":"regulation of blood pressure by chemoreceptor signalling pathway","type":"exact"}],"termid":"GO:0010850"}


id: MOD:01937
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-palmitoyl-L-methionine.","definition_xrefs":["RESID:AA0591","PubMed:20942504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino palmitoylated residue","termid":"MOD:01685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-palmitoyl-L-methionine","synonyms":[{"name":"(2S)-2-(hexadecanoylamino)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-(hexadecanamido)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"LIPID N-palmitoyl methionine","type":"exact"},{"name":"N-(1-oxohexadecyl)methionine","type":"exact"},{"name":"N-palmitoyl-L-methionine","type":"exact"}],"termid":"MOD:01937"}


id: PBO:0065882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB32, member RAS oncogene family","termid":"PBO:0065882"}


id: GO:0008789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-altronate = 2-dehydro-3-deoxy-D-gluconate + H2O.","definition_xrefs":["EC:4.2.1.7","RHEA:15957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"altronate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R01540","MetaCyc:ALTRODEHYDRAT-RXN"],"synonyms":[{"name":"D-altronate hydro-lyase (2-dehydro-3-deoxy-D-galactonate-forming)","type":"related"},{"name":"D-altronate hydro-lyase activity","type":"related"}],"termid":"GO:0008789"}


id: GO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of ecdysteroid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid secretion","termid":"GO:0007555"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of ecdysteroid secretion","synonyms":[{"name":"down regulation of ecdysteroid secretion","type":"exact"},{"name":"down-regulation of ecdysteroid secretion","type":"exact"},{"name":"downregulation of ecdysteroid secretion","type":"exact"},{"name":"inhibition of ecdysteroid secretion","type":"narrow"}],"termid":"GO:0045999"}


id: PBO:0013129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl1","termid":"PBO:0013129"}


id: MOD:01997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with a butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanoylated residue","termid":"MOD:01996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-butanoylated residue","synonyms":[{"name":"N-butanoyl","type":"exact"},{"name":"N-butanoylation","type":"exact"},{"name":"N-butyryl","type":"exact"},{"name":"N-butyrylation","type":"exact"},{"name":"NButRes","type":"exact"}],"termid":"MOD:01997"}


id: PBO:0082583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-associated protein; required for sister chromatid cohesion; interacts with DNA polymerase alpha (Pol1p); recruits Mms22p to replication forks during S phase, and may link DNA synthesis to sister chromatid cohesion","termid":"PBO:0082583"}


id: MONDO:0859161
data:
  {"annotated_genes":["SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86904],"is_not":false,"summary":null,"term":"MONDO:0859161"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02488":null},"genotype_count":0,"is_obsolete":false,"name":"onychodystrophy, osteodystrophy, impaired intellectual development, and seizures syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543496","MEDGEN:1788511","OMIM:619356"],"termid":"MONDO:0859161","terms_by_termid":{"MONDO:0859161":null},"xrefs":{"Monarch":{"xref_id":"0859161"}}}


id: MONDO:0023140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fenton Wilkinson Toselano syndrome (obsolete MONDO:0023140)","termid":"MONDO:0023140","xrefs":{"Monarch":{"xref_id":"0023140"}}}


id: MONDO:0019233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"disorder of peroxisomal beta oxidation","secondary_identifiers":["NANDO:1200764","UMLS:C5681280","GARD:12470","Orphanet:79188","MEDGEN:1843097"],"synonyms":[{"name":"disorder of peroxisomal beta oxidation","type":"exact"}],"termid":"MONDO:0019233","xrefs":{"Monarch":{"xref_id":"0019233"}}}


