# terms

id: MONDO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 95","secondary_identifiers":["OMIM:619773","UMLS:C5676929","MEDGEN:1802205"],"synonyms":[{"name":"IMD95","type":"exact"},{"name":"immunodeficiency 95","type":"exact"}],"termid":"MONDO:0030692","xrefs":{"Monarch":{"xref_id":"0030692"}}}


id: MONDO:0045001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the cardiac ventricle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac ventricle disorder","secondary_identifiers":["UMLS:C1562298","SCTID:415991003","MEDGEN:736361"],"synonyms":[{"name":"cardiac ventricle disease","type":"exact"},{"name":"cardiac ventricle disease or disorder","type":"exact"},{"name":"disease of cardiac ventricle","type":"exact"},{"name":"disease or disorder of cardiac ventricle","type":"exact"},{"name":"disorder of cardiac ventricle","type":"exact"}],"termid":"MONDO:0045001","xrefs":{"Monarch":{"xref_id":"0045001"}}}


id: MONDO:1012564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"growth and respiratory lethal syndrome, non-human animal","termid":"MONDO:1011935"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth and respiratory lethal syndrome, cattle","secondary_identifiers":["OMIA:002560-9913"],"termid":"MONDO:1012564","xrefs":{"Monarch":{"xref_id":"1012564"}}}


id: GO:0140868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + 15-cis-4,4'-diapophytoene + 3 FAD = 4,4'-diapolycopene + 3 FADH2. This reaction consists of three successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'-diaponeurosporene (the major deep-yellow pigment in staphylococci strains) as the end product.","definition_xrefs":["PMID:15933032"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,4'-diapophytoene desaturase (4,4'-diapolycopene-forming) (obsolete GO:0140868)","synonyms":[{"name":"4,4'-diapophytoene desaturase activity","type":"broad"}],"termid":"GO:0140868"}


id: GO:1903847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","PMID:22269326","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aorta morphogenesis","termid":"GO:1903847"}


id: MONDO:0016592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebellar ataxia","termid":"MONDO:0000437"}],"gene_count":0,"genotype_count":0,"name":"obsolete non-hereditary degenerative ataxia (obsolete MONDO:0016592)","secondary_identifiers":["icd11.foundation:1257393361","Orphanet:247239"],"termid":"MONDO:0016592","xrefs":{"Monarch":{"xref_id":"0016592"}}}


id: PBO:0067461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 586, pseudogene","termid":"PBO:0067461"}


id: MONDO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia that occurs during the neonatal period.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood leukemia","termid":"MONDO:0004355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"neonatal leukemia","secondary_identifiers":["NCIT:C3845","MEDGEN:116003","UMLS:C0235813","DOID:7756"],"synonyms":[{"name":"neonatal leukemia","type":"exact"}],"termid":"MONDO:0004354","xrefs":{"Monarch":{"xref_id":"0004354"}}}


id: PBO:0038633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitase 1","termid":"PBO:0038633"}


id: PBO:0009180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sir antagonist","termid":"PBO:0009180"}


id: PBO:0041559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 53","termid":"PBO:0041559"}


id: GO:0044111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.","definition_xrefs":["GO:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interspecies interaction between organisms","termid":"GO:0044419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of structure involved in a symbiotic process","secondary_identifiers":["GO:0044115","GO:0044152"],"synonyms":[{"name":"development during symbiotic interaction","type":"related"},{"name":"development involved in symbiotic interaction","type":"related"},{"name":"development of symbiont during interaction with host","type":"related"},{"name":"development of symbiont involved in interaction with host","type":"related"},{"name":"development on or near surface of other organism during symbiotic interaction","type":"related"},{"name":"development on or near surface of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0044111"}


id: MONDO:0015317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"infantile hemangioma of rare localization","termid":"MONDO:0016223"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngotracheal angioma","secondary_identifiers":["GARD:19893","Orphanet:137935","MEDGEN:825419","NCIT:C99086","SCTID:703199001","ICD9:228.09","UMLS:C3839574"],"termid":"MONDO:0015317","xrefs":{"Monarch":{"xref_id":"0015317"}}}


id: PBO:0085728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation","termid":"PBO:0085728"}


id: PBO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-lactate dehydrogenase, cytochrome (predicted)","termid":"PBO:0003368"}


id: GO:0150089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and one or more dendritic spines.","definition_xrefs":["PMID:11248111","PMID:11466428","PMID:10586883","PMID:18501438","GOC:bc","PMID:22028887","PMID:29774619","PMID:7482800","PMID:8366344","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization","synonyms":[{"name":"multi-synapse organisation","type":"broad"},{"name":"multi-synapse organization","type":"broad"},{"name":"multi-synaptic organisation","type":"broad"},{"name":"multi-synaptic organization","type":"broad"},{"name":"multiple spine synapse organisation","type":"exact"},{"name":"multisynapse organisation","type":"broad"},{"name":"multisynapse organization","type":"broad"},{"name":"multisynaptic organisation","type":"broad"},{"name":"multisynaptic organization","type":"broad"}],"termid":"GO:0150089"}


id: GO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the level of any of the various angiotensinogen proteolytic products in the blood. This occurs by the proteolytic cleavage of angiotensinogen, and its proteolytic products, to create a variety of active peptide hormones, such as angiotensin I and angiotensin II, as well as through the removal of these peptides from the circulation.","definition_xrefs":["PMID:21951628","Wikipedia:Angiotensin","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","termid":"GO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiotensin levels in blood","synonyms":[{"name":"control of angiotensin levels in blood","type":"related"},{"name":"control of blood angiotensin level","type":"related"},{"name":"regulation of blood angiotensin level","type":"exact"}],"termid":"GO:0002002"}


id: PR:O13692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.13c","synonyms":[{"name":"Spom972h-gas5","type":"exact"}],"termid":"PR:O13692"}


id: PBO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A2, pseudogene","termid":"PBO:0047060"}


id: PBO:0062287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 4","termid":"PBO:0062287"}


id: GO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylthiopropyl-glucosinolate = 6-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080105"}


id: GO:0042216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene metabolic process","termid":"GO:0018955"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenanthrene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:phe"],"synonyms":[{"name":"phenanthrene breakdown","type":"exact"},{"name":"phenanthrene catabolism","type":"exact"},{"name":"phenanthrene degradation","type":"exact"}],"termid":"GO:0042216"}


id: PBO:0111646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Bur6","termid":"PBO:0111646"}


id: PBO:0053533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 534","termid":"PBO:0053533"}


id: GO:0009347
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multienzyme complex that catalyzes the formation N-carbamoyl-L-aspartate from carbamoyl phosphate and L-aspartate. It exhibits a variety of architectural organizations, but in all microorganisms the core catalytic component is a homotrimer of approximately 34 kDa polypeptides.","definition_xrefs":["PMID:10447693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"aspartate carbamoyltransferase complex","termid":"GO:0009347"}


id: PBO:0049545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 8","termid":"PBO:0049545"}


id: PBO:0082338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant","termid":"PBO:0082338"}


id: GO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of proteolysis associated with antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of proteolysis associated with antigen processing and presentation","termid":"GO:0002628"}


id: PBO:0040621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF nuclear assembly factor 1","termid":"PBO:0040621"}


id: MONDO:0009314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete GTP-cyclohydrolase I deficiency (obsolete MONDO:0009314)","termid":"MONDO:0009314","xrefs":{"Monarch":{"xref_id":"0009314"}}}


id: FYPO:0003601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any rRNA precursor measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased rRNA precursor level","synonyms":[{"name":"decreased rRNA precursor accumulation","type":"related"},{"name":"decreased rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"decreased rRNA precursor level during vegetative growth","type":"exact"},{"name":"decreased rRNA precursor transcript level","type":"exact"},{"name":"reduced rRNA precursor level","type":"exact"}],"termid":"FYPO:0003601"}


id: MONDO:0020122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An umbrella term for diseases which have chronic muscle inflammation and weakness of unknown etiology. The types of idiopathic inflammatory myopathy are further defined by either clinicopathologic criteria or by the presence of certain autoantibodies.","definition_xrefs":["NCIT:C116796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"},{"relation_name":"is_a","term_name":"idiopathic inflammatory myopathy","termid":"MONDO:0600023"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"acquired idiopathic inflammatory myopathy","secondary_identifiers":["GARD:9128","icd11.foundation:464294586","ICD9:359.79","Orphanet:98482"],"synonyms":[{"name":"IIm","type":"exact"},{"name":"IMM","type":"exact"},{"name":"idiopathic inflammatory myopathies","type":"exact"},{"name":"idiopathic inflammatory myopathy, familial","type":"related"},{"name":"idiopathic inflammatory myositis","type":"exact"}],"termid":"MONDO:0020122","xrefs":{"Monarch":{"xref_id":"0020122"}}}


id: MONDO:0971014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 3","secondary_identifiers":["OMIM:620816","UMLS:C1859536","MEDGEN:347175"],"termid":"MONDO:0971014","xrefs":{"Monarch":{"xref_id":"0971014"}}}


id: PBO:0083474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SEL1","termid":"PBO:0083474"}


id: MONDO:0002150
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"Neoplastic, inflammatory, infectious, and other diseases of the hypothalamus. Clinical manifestations include appetite disorders; autonomic nervous system diseases; sleep disorders; behavioral symptoms related to dysfunction of the limbic system; and neuroendocrine disorders.","definition_xrefs":["MESH:D007027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thalamic disorder","termid":"MONDO:0003081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"hypothalamic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:399100005","UMLS:C0020655","MEDGEN:6988","DOID:1931","ICD9:253.9"],"synonyms":[{"name":"disease of hypothalamus","type":"exact"},{"name":"disease or disorder of hypothalamus","type":"exact"},{"name":"disorder of hypothalamus","type":"exact"},{"name":"hypothalamus disease","type":"exact"},{"name":"hypothalamus disease or disorder","type":"exact"}],"termid":"MONDO:0002150","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0002150"}}}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: MONDO:0022725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chondrodysplasia lethal recessive (obsolete MONDO:0022725)","termid":"MONDO:0022725","xrefs":{"Monarch":{"xref_id":"0022725"}}}


id: PBO:0038359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activity_directly_negatively_regulates_activity_of","termid":"PBO:0038359"}


id: MONDO:0014176
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024567"}]},"cv_name":"mondo","definition":"A rare, genetic neurodegenerative disorder characterized by severe, persistent hypotonia (presenting at birth or in early infancy), severe global developmental delay (with poor or absent speech, difficulty or inability to roll, sit or walk), profound intellectual disability, and failure to thrive. Additional manifestations include microcephaly, progressive peripheral spasticity, bilateral strabismus and nystagmus, constipation, and variable dysmorphic facial features (including plagiocephaly, broad forehead, small nose, low-set ears, micrognathia and open mouth with tented upper lip).","definition_xrefs":["Orphanet:371364"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005559"],"is_obsolete":false,"name":"hypotonia, infantile, with psychomotor retardation and characteristic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1642314","OMIMPS:615419","GARD:17609","UMLS:C4706556"],"synonyms":[{"name":"IHPRF","type":"exact"},{"name":"IHPRF syndrome","type":"exact"},{"name":"hypotonia, infantile, with psychomotor retardation and characteristic facies","type":"exact"},{"name":"hypotonia-speech impairment-severe cognitive delay syndrome","type":"exact"},{"name":"infantile hypotonia-psychomotor retardation-characteristic facies syndrome","type":"exact"}],"termid":"MONDO:0014176","terms_by_termid":{"MONDO:0024567":null},"xrefs":{"Monarch":{"xref_id":"0014176"}}}


id: FYPO:0008159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation at the silent mating-type locus does not occur. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be abolished.","definition_xrefs":["PMID:16246721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone phosphorylation during vegetative growth","termid":"FYPO:0002592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008159"}


id: PBO:0016942
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Histone Deacetylase","termid":"PBO:0016942"}


id: MONDO:0005525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant disease of the T-lymphocytes in the bone marrow, thymus, and/or blood.","definition_xrefs":["MESH:D015458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"lymphoid leukemia","termid":"MONDO:0005402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"T-cell leukemia","secondary_identifiers":["MEDGEN:6064","EFO:0005592","NCIT:C8694","UMLS:C0023492","DOID:715"],"synonyms":[{"name":"T cell leukaemia (disease)","type":"exact"},{"name":"T cell leukemia (disease)","type":"exact"},{"name":"leukaemia (disease) of T cell","type":"exact"},{"name":"leukemia (disease) of T cell","type":"exact"}],"termid":"MONDO:0005525","xrefs":{"Monarch":{"xref_id":"0005525"}}}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: FYPO:0003662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via an error-free mechanism, such as homologous recombination or break-induced replication, is increased.","definition_xrefs":["PomBase:mah","PMID:10373582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000293"],"is_obsolete":false,"name":"increased error-free double-strand break repair","synonyms":[{"name":"increased error-free double-strand break repair during mitotic cell cycle","type":"related"},{"name":"increased error-free double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003662"}


id: GO:0033007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of mast cell activation","termid":"GO:0033004"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell activation involved in immune response","synonyms":[{"name":"negative regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033007"}


id: PBO:0086240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes to sites of polarized growth; required for selection and/or maintenance of polarized growth sites, may modulate signaling by the GTPases Cdc42p and Rho1p; contains LIM domains and has similarity to metazoan paxillin; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0086240"}


id: PBO:0039907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF7 antisense RNA 2","termid":"PBO:0039907"}


id: GO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens development","termid":"GO:0048058"}


id: MONDO:0019846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired central diabetes insipidus (acquired CDI) is a subtype of central diabetes insipidus (CDI), characterized by polyuria and polydipsia, due to an idiopathic or secondary decrease in vasopressin (AVP) production.","definition_xrefs":["Orphanet:95626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central diabetes insipidus","termid":"MONDO:0015790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired central diabetes insipidus","secondary_identifiers":["icd11.foundation:1677009817","MEDGEN:1843437","UMLS:C5680256","GARD:19291","ICD10CM:E23.2"],"synonyms":[{"name":"acquired CDI","type":"exact"},{"name":"acquired central diabetes insipidus","type":"exact"},{"name":"acquired neurogenic diabetes insipidus","type":"exact"}],"termid":"MONDO:0019846","xrefs":{"Monarch":{"xref_id":"0019846"}}}


id: PBO:0051123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-1 (pseudogene)","termid":"PBO:0051123"}


id: FYPO:0003047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the silent mating-type cassette than normal, such that it extends beyond the IRR boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRR","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRR during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRR during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRR","type":"exact"}],"termid":"FYPO:0003047"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["CL:0000771","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: GO:0008628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a hormone, and which triggers the apoptotic signaling pathway in a cell. The pathway starts with reception of a hormone signal, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:bf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hormone-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to hormone","type":"related"},{"name":"induction of apoptosis by hormones","type":"related"}],"termid":"GO:0008628"}


id: MONDO:0020466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"},{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"monosomy X","secondary_identifiers":["MEDGEN:116607","SCTID:710008008","UMLS:C0242526","NCIT:C36630","GARD:19676","Orphanet:99226","icd11.foundation:95979116"],"synonyms":[{"name":"monosomy type X","type":"exact"}],"termid":"MONDO:0020466","xrefs":{"Monarch":{"xref_id":"0020466"}}}


id: MONDO:0018465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Insulin autoimmune syndrome is a rare condition that causes low blood sugar (hypoglycemia). This occurs because the body begins to make a specific kind of protein called antibodies to attack insulin. Insulin is a naturally occurring hormone that is responsible for keeping blood sugar at a normal level. When blood sugar levels get too high, insulin helps to store the sugar for future use. People affected by insulin autoimmune syndrome have antibodies that attack insulin, causing it to work too hard and the level of blood sugar to become too low. Insulin autoimmune syndrome most often begins during adulthood.","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia","termid":"MONDO:0005803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"insulin autoimmune syndrome","secondary_identifiers":["GARD:10808","MEDGEN:678528","Orphanet:411593","SCTID:408539000","UMLS:C0854359","DOID:0040100","ICD9:279.49"],"synonyms":[{"name":"Hirata disease","type":"exact"},{"name":"insulin autoimmune hypoglycemia","type":"related"}],"termid":"MONDO:0018465","xrefs":{"Monarch":{"xref_id":"0018465"}}}


id: PBO:0058215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4507","termid":"PBO:0058215"}


id: PBO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 3","termid":"PBO:0044029"}


id: GO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell wall surrounding a fungal hypha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hyphal cell wall","termid":"GO:0030446"}


id: GO:0031564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A positive regulation of gene expression mechanism that allows RNA polymerase to continue transcription beyond a termination site, thus allowing expression of downstream genes under specific conditions.","definition_xrefs":["PMID:30191803","ISBN:0198577788","PMID:21478900","PMID:12456320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription antitermination","synonyms":[{"name":"transcriptional readthrough","type":"exact"}],"termid":"GO:0031564"}


id: GO:0015375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine(out) + Na+(out) = glycine(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid:sodium symporter activity","termid":"GO:0005295"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"glycine transmembrane transporter activity","termid":"GO:0015187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycine:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-5660840","RHEA:68228","Reactome:R-HSA-444120","GO:0015656"],"termid":"GO:0015375"}


id: GO:0005372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of water (H2O) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"water transmembrane transporter activity","termid":"GO:0005372"}


id: PBO:0042916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CF transmembrane conductance regulator","termid":"PBO:0042916"}


id: PBO:0071862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3A","termid":"PBO:0071862"}


id: GO:0070816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to an amino acid residue in the C-terminal domain of RNA polymerase II. Typically, this occurs during the transcription cycle and results in production of an RNA polymerase II enzyme where the carboxy-terminal domain (CTD) of the largest subunit is extensively phosphorylated, often referred to as hyperphosphorylated or the II(0) form. Specific types of phosphorylation within the CTD are usually associated with specific regions of genes, though there are exceptions. The phosphorylation state regulates the association of specific complexes such as the capping enzyme or 3'-RNA processing machinery to the elongating RNA polymerase complex.","definition_xrefs":["PMID:17079683","GOC:krc","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:0070816)","synonyms":[{"name":"CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:0070816"}


id: GO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide to the antigen binding groove of an MHC class I protein complex. Class I here refers to classical class I molecules.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"},{"relation_name":"part_of","term_name":"MHC class I protein complex assembly","termid":"GO:0002397"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"peptide antigen assembly with MHC class I protein complex","termid":"GO:0002502"}


id: SO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene that arose via gene duplication. Generally duplicated pseudogenes have the same structure as the original gene, including intron-exon structure and some regulatory sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated_pseudogene","synonyms":[{"name":"duplicated pseudogene","type":"related"}],"termid":"SO:0001758"}


id: GO:0051586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of dopamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine uptake involved in synaptic transmission","termid":"GO:0051584"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051944"},{"relation_name":"positively_regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"activation of dopamine uptake involved in synaptic transmission","type":"narrow"},{"name":"positive regulation of dopamine import involved in synaptic transmission","type":"exact"},{"name":"stimulation of dopamine uptake involved in synaptic transmission","type":"narrow"},{"name":"up regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"up-regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"upregulation of dopamine uptake involved in synaptic transmission","type":"exact"}],"termid":"GO:0051586"}


id: PBO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo12 family protein","termid":"PBO:0001767"}


id: PBO:0055993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limbic system associated membrane protein","termid":"PBO:0055993"}


id: PBO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 8","termid":"PBO:0047549"}


id: MONDO:0017915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pure or complex autosomal recessive spastic paraplegia (obsolete MONDO:0017915)","secondary_identifiers":["Orphanet:320346"],"synonyms":[{"name":"Pure or complicated autosomal recessive spastic paraplegia","type":"exact"}],"termid":"MONDO:0017915","xrefs":{"Monarch":{"xref_id":"0017915"}}}


id: GO:0006295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of the damaged strand of DNA 3' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision precedes the incision formed 5' to the site of damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision, 3'-to lesion (obsolete GO:0006295)","synonyms":[{"name":"nucleotide-excision repair, DNA incision, 3' to lesion","type":"exact"}],"termid":"GO:0006295"}


id: GO:0042869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which aldarate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"aldarate transmembrane transport","synonyms":[{"name":"aldarate transport","type":"related"}],"termid":"GO:0042869"}


id: MONDO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic phalangeal acro-osteolysis","secondary_identifiers":["MEDGEN:1803504","GARD:21860","Orphanet:444316","UMLS:C5680064"],"synonyms":[{"name":"idiopathic phalangeal acroosteolysis","type":"exact"}],"termid":"MONDO:0018635","xrefs":{"Monarch":{"xref_id":"0018635"}}}


id: GO:0001407
data:
  {"annotated_genes":["SJAG_00232","SJAG_05325","SJAG_03644"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102954,102955,102956],"is_not":false,"summary":null,"term":"GO:0001407"}]},"cv_name":"biological_process","definition":"The process in which a glycerophosphodiester is transported across a membrane. Glycerophosphodiesters are small molecules composed of glycerol-3-phosphate and an alcohol, for example, glycerophosphoinositol.","definition_xrefs":["PMID:12912892","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_03644":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"glycerophosphodiester transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001407","terms_by_termid":{"GO:0001407":null}}


id: MONDO:0007723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Hirschsprung disease in which the cause of the disease is a mutation in the RET gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 1","secondary_identifiers":["UMLS:C3888239","OMIM:142623","MEDGEN:854827"],"synonyms":[{"name":"HSCR1","type":"exact"},{"name":"Hirschsprung disease","type":"broad"},{"name":"Hirschsprung disease caused by mutation in RET","type":"exact"},{"name":"Hirschsprung disease, protection against","type":"related"},{"name":"Hirschsprung disease, susceptibility to, 1","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, type 1","type":"exact"},{"name":"RET Hirschsprung disease","type":"exact"},{"name":"aganglionic megacolon","type":"broad"},{"name":"megacolon, aganglionic","type":"broad"},{"name":"susceptibility to Hirschsprung disease 1","type":"exact"}],"termid":"MONDO:0007723","xrefs":{"Monarch":{"xref_id":"0007723"}}}


id: PBO:0061757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyl-ADP-ribose deacylase 1","termid":"PBO:0061757"}


id: PBO:0081684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 606","termid":"PBO:0081684"}


id: PBO:0057204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374c","termid":"PBO:0057204"}


id: FYPO:0005782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer mitotic checkpoint complexes than normal.","definition_xrefs":["PMID:26882497","PomBase:mah","GO:0033597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex level","synonyms":[{"name":"decreased MCC level","type":"related"},{"name":"decreased mitotic checkpoint complex level during mitotic cell cycle","type":"related"},{"name":"decreased mitotic checkpoint complex level during vegetative growth","type":"exact"},{"name":"mitotic checkpoint complexes present at decreased level","type":"exact"},{"name":"reduced mitotic checkpoint complex level","type":"exact"}],"termid":"FYPO:0005782"}


id: GO:1905787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["PMID:8692859","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905787"}


id: GO:0047694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: barbiturate + H2O = malonate + urea.","definition_xrefs":["EC:3.5.2.1","MetaCyc:BARBITURASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"barbiturase activity","secondary_identifiers":["RHEA:18653"],"synonyms":[{"name":"barbiturate amidohydrolase (3-oxo-3-ureidopropanoate-forming)","type":"related"}],"termid":"GO:0047694"}


id: GO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent cytosolic phospholipase A2 activity (obsolete GO:0004627)","synonyms":[{"name":"calcium-dependent cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004627"}


id: GO:0035352
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which a nicotinamide adenine dinucleotide is transported across a membrane; transport may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD transport","termid":"GO:0043132"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"NAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD membrane transport","type":"exact"}],"termid":"GO:0035352","terms_by_termid":{"GO:1990549":null}}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: GO:0047765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: caldesmon phosphate + H2O = caldesmon + phosphate.","definition_xrefs":["PMID:6150036"],"gene_count":0,"genotype_count":0,"name":"obsolete caldesmon-phosphatase activity (obsolete GO:0047765)","termid":"GO:0047765"}


id: GO:0032730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 alpha production","termid":"GO:0032650"},{"relation_name":"is_a","term_name":"positive regulation of interleukin-1 production","termid":"GO:0032732"},{"relation_name":"positively_regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050717","GO:0050726"],"synonyms":[{"name":"activation of interleukin-1 alpha production","type":"narrow"},{"name":"positive regulation of IL-1 alpha production","type":"exact"},{"name":"positive regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 alpha secretion","type":"narrow"},{"name":"stimulation of interleukin-1 alpha production","type":"narrow"},{"name":"up regulation of interleukin-1 alpha production","type":"exact"},{"name":"up-regulation of interleukin-1 alpha production","type":"exact"},{"name":"upregulation of interleukin-1 alpha production","type":"exact"}],"termid":"GO:0032730"}


id: GO:0106073
data:
  {"annotated_genes":["SJAG_03764"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69471],"is_not":false,"summary":null,"term":"GO:0106073"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of the third glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Glc(2)Man(9)GlcNAc(2)-PP-Dol.","definition_xrefs":["GOC:ha","PMID:9597543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03764":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:29543","EC:2.4.1.256"],"termid":"GO:0106073","terms_by_termid":{"GO:0106073":null}}


id: GO:2000973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pro-B cell differentiation","synonyms":[{"name":"regulation of pro-B cell development","type":"related"},{"name":"regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000973"}


id: PBO:0062550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily P member 1 pseudogene","termid":"PBO:0062550"}


id: GO:0019199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0004672","GO:0003674","GO:0038023","GO:0003824","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"transmembrane receptor protein kinase activity","secondary_identifiers":["Reactome:R-HSA-8983063","Reactome:R-HSA-8983059"],"termid":"GO:0019199"}


id: PBO:0036412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, implicated in chromosome segregation","termid":"PBO:0036412"}


id: PBO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae thi7","termid":"PBO:0003044"}


id: PBO:0002762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not3/5 (predicted)","termid":"PBO:0002762"}


id: PATO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000868 vibrissae reflex value (obsolete PATO:0000868)","termid":"PATO:0000868"}


id: PBO:0064818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3A","termid":"PBO:0064818"}


id: GO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of cross-linked glycoproteins.","definition_xrefs":["PMID:18508691","GOC:mah","PMID:7048321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"glycoprotein network","secondary_identifiers":["Wikipedia:Extensin"],"synonyms":[{"name":"extensin","type":"exact"}],"termid":"GO:0048222"}


id: PBO:0044570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger B","termid":"PBO:0044570"}


id: GO:0008328
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex.","definition_xrefs":["PMID:34753794","PMID:20716669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}


id: MONDO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stüve-Wiedemann syndrome (obsolete MONDO:0011108)","termid":"MONDO:0011108","xrefs":{"Monarch":{"xref_id":"0011108"}}}


id: PBO:0048274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 10","termid":"PBO:0048274"}


id: PBO:0089931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc15","termid":"PBO:0089931"}


id: PBO:0044784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death effector domain containing 2","termid":"PBO:0044784"}


id: PBO:0058341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4714","termid":"PBO:0058341"}


id: SO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene suspected of being involved in the expression of a trait.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate_gene","synonyms":[{"name":"candidate gene","type":"exact"},{"name":"target gene","type":"exact"}],"termid":"SO:0001867"}


id: MONDO:0958206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 89","secondary_identifiers":["OMIM:620705","UMLS:C5882752","MEDGEN:1852501","DOID:0070588"],"termid":"MONDO:0958206","xrefs":{"Monarch":{"xref_id":"0958206"}}}


id: FYPO:0001815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which Okazaki fragments, the DNA segments produced by discontinuous synthesis of the lagging strand during DNA replication, are present at greater levels than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of Okazaki fragments","synonyms":[{"name":"Okazaki fragment accumulation","type":"exact"},{"name":"accumulation of Okazaki fragments","type":"exact"},{"name":"accumulation of Okazaki fragments during vegetative growth","type":"exact"},{"name":"increased level of Okazaki fragments during mitotic cell cycle","type":"related"},{"name":"increased level of Okazaki fragments during vegetative growth","type":"exact"}],"termid":"FYPO:0001815"}


id: PBO:0075756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase","termid":"PBO:0075756"}


id: PBO:0064845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R13B divergent transcript","termid":"PBO:0064845"}


id: GO:0180030
data:
  {"annotated_genes":["SJAG_01148","SJAG_03409","SJAG_02321","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033857"},{"annotations":[115447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052723"},{"annotations":[75162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035299"},{"annotations":[75953,71631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000824"},{"annotations":[75954,71632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008440"},{"annotations":[99160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphate + ATP = inositol phosphate + ADP.","definition_xrefs":["PMID:35536002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01148":null,"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"inositol phosphate kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0180030","terms_by_termid":{"GO:0000823":null,"GO:0000824":null,"GO:0008440":null,"GO:0033857":null,"GO:0035299":null,"GO:0052723":null}}


id: MONDO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronin-1A deficiency (obsolete MONDO:0000579)","termid":"MONDO:0000579","xrefs":{"Monarch":{"xref_id":"0000579"}}}


id: SO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000106 non_capped_primary_transcript (obsolete SO:0000106)","termid":"SO:0000106"}


id: PBO:0035811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_(1->3)-alpha-D-glucan_level_in_periplasmic_space","termid":"PBO:0035811"}


id: GO:0097266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + H+ + NADPH + O2 = 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA + H2O + NADP+.","definition_xrefs":["EC:1.14.13.149","GOC:gk","PMID:20660314","GOC:bf","PMID:21247899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phenylacetyl-CoA 1,2-epoxidase activity","secondary_identifiers":["KEGG_REACTION:R09838","RHEA:32171"],"synonyms":[{"name":"phenylacetyl-CoA epoxidase activity","type":"exact"},{"name":"phenylacetyl-CoA monooxygenase activity","type":"related"},{"name":"ring 1,2-phenylacetyl-CoA epoxidase activity","type":"related"}],"termid":"GO:0097266"}


id: FYPO:0007094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells fuse for a longer time than normal during mating.","definition_xrefs":["PomBase:mah","PMID:31495586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell fusion during mating","termid":"FYPO:0000412"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of cell fusion during mating","synonyms":[{"name":"increased duration of cell fusion during conjugation","type":"exact"},{"name":"increased duration of plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"prolonged cell fusion during mating","type":"exact"}],"termid":"FYPO:0007094"}


id: PBO:0059810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 36","termid":"PBO:0059810"}


id: PBO:0068928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 171, pseudogene","termid":"PBO:0068928"}


id: GO:0071177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071177"}


id: PBO:0058789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7158","termid":"PBO:0058789"}


id: PBO:0029947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029947"}


id: PBO:0064261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A8 pseudogene 1","termid":"PBO:0064261"}


id: PBO:0049333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 1","termid":"PBO:0049333"}


id: PBO:0057564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 759","termid":"PBO:0057564"}


id: GO:0061857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response to endoplasimic reticulum stress in which nascent proteins are degraded by attenuation of their translocation into the ER followed by rerouting to the cytosol without cleavage of the signal peptide, and subsequent degradation by the proteasome.","definition_xrefs":["PMID:26565908","PMID:17129784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum stress-induced pre-emptive quality control","synonyms":[{"name":"ER pQC","type":"exact"},{"name":"ER stress-indiced pre-emptive quality control","type":"exact"}],"termid":"GO:0061857"}


id: PBO:0089400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic meiotic pumilio family RNA-binding protein Mpf1","termid":"PBO:0089400"}


id: MONDO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell bone tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing sarcoma/peripheral neuroectodermal tumor. It often affects the diaphysis or metaphyseal-diaphyseal portion of long bones. Clinical findings include pain and a mass in the involved area. fever, anemia, leukocytosis, and an increased sedimentation rate are often seen. X-ray examination reveals osteolytic lesions. The prognosis depends on the stage, anatomic location, and size of the tumor.","definition_xrefs":["NCIT:C4835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ewing sarcoma","termid":"MONDO:0012817"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor of bone","termid":"MONDO:0021123"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Ewing sarcoma of bone","secondary_identifiers":["SCTID:307608006","UMLS:C0585474","DOID:3368","MEDGEN:108438","ICD9:170.9"],"synonyms":[{"name":"Ewing sarcoma of bone","type":"exact"},{"name":"Ewing's sarcoma of bone","type":"exact"},{"name":"Ewing's sarcoma, osseous","type":"exact"},{"name":"Ewing's sarcoma/bone peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"Ewing's sarcoma/bone peripheral primitive neuroectodermal tumour","type":"exact"},{"name":"bone Ewing sarcoma","type":"exact"},{"name":"bone Ewing's sarcoma","type":"exact"},{"name":"bone localised Ewing sarcoma","type":"exact"},{"name":"bone localised Ewing's sarcoma","type":"exact"},{"name":"bone localized Ewing sarcoma","type":"exact"},{"name":"bone localized Ewing's sarcoma","type":"exact"},{"name":"bone tissue Ewing sarcoma","type":"exact"},{"name":"localised skeletal Ewing's sarcoma","type":"exact"},{"name":"localized skeletal Ewing's sarcoma","type":"exact"},{"name":"osseous Ewing's sarcoma","type":"exact"},{"name":"osseous Ewing's tumor","type":"exact"},{"name":"osseous Ewing's tumour","type":"exact"},{"name":"skeletal Ewing's sarcoma","type":"exact"},{"name":"skeletal Ewing's tumor","type":"exact"},{"name":"skeletal Ewing's tumour","type":"exact"}],"termid":"MONDO:0002625","xrefs":{"Monarch":{"xref_id":"0002625"}}}


id: GO:0021832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of cells to one another to form groups of cells involved in cerebral cortex tangential migration.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021832"}


id: FYPO:0003286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0000631","FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic chromosome condensation","synonyms":[{"name":"decreased chromosome condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"reduced mitotic chromosome condensation","type":"exact"}],"termid":"FYPO:0003286"}


id: PBO:0111906
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain","termid":"PBO:0111906"}


id: GO:0001878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to yeast","termid":"GO:0001878"}


id: FYPO:0006888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type) when the cell is subject to iron ion starvation.","definition_xrefs":["PomBase:mah","PMID:29549126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to plasma membrane","termid":"FYPO:0002674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to plasma membrane during iron starvation","synonyms":[{"name":"normal protein localisation to plasma membrane during iron starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron ion starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006888"}


id: PBO:0044379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily B member 1","termid":"PBO:0044379"}


id: PBO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent 3' to 5' DNA helicase Ino80","termid":"PBO:0017840"}


id: PBO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 18","termid":"PBO:0075206"}


id: GO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophanamide + H2O = L-tryptophan + NH4.","definition_xrefs":["RHEA:11012","EC:3.5.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"tryptophanamidase activity","secondary_identifiers":["KEGG_REACTION:R00682","MetaCyc:TRYPTOPHANAMIDASE-RXN"],"synonyms":[{"name":"L-tryptophan aminopeptidase","type":"broad"},{"name":"L-tryptophanamide amidohydrolase activity","type":"related"},{"name":"tryptophan aminopeptidase","type":"broad"}],"termid":"GO:0050365"}


id: GO:0140078
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65887],"is_not":false,"summary":null,"term":"GO:0140078"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of an AP site 3' of the baseless site by a beta-lyase mechanism, leaving an unsaturated aldehyde, termed a 3'-(4-hydroxy-5-phospho-2-pentenal) residue, and a 5'-phosphate.","definition_xrefs":["PMID:1698278","RHEA:66592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"class I DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:4.2.99.18","MetaCyc:4.2.99.18-RXN","Wikipedia:AP_endonuclease"],"synonyms":[{"name":"AP endonuclease class I activity","type":"related"},{"name":"AP lyase activity","type":"related"},{"name":"AP site-DNA 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"},{"name":"class I AP endonuclease activity","type":"related"},{"name":"class I DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0140078","terms_by_termid":{"GO:0140078":null}}


id: GO:0102223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 H+ + 15-cis-4,4'-diapophytoene + 4 FAD = 4,4'-diapolycopene + 4 FADH2. This reaction consists of four successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene, 4,4'-diapo-zeta-carotene and 4,4'-diapolycopene as intermediates, and 4,4'-diapolycopene as the end product.","definition_xrefs":["PMID:8002598","RHEA:31391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming)","secondary_identifiers":["GO:0102961","GO:0102962","EC:1.3.8.2","GO:0102225","MetaCyc:RXN-12224"],"synonyms":[{"name":"4,4'-diapo-zeta-carotene desaturase activity","type":"narrow"},{"name":"4,4'-diaponeurosporene desaturase activity","type":"narrow"},{"name":"4,4'-diapophytoene desaturase activity","type":"broad"},{"name":"4,4'-diapophytofluene desaturase activity","type":"narrow"}],"termid":"GO:0102223"}


id: PBO:0059579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTA1 divergent transcript","termid":"PBO:0059579"}


id: GO:0015879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"carnitine transport","synonyms":[{"name":"vitamin Bt transport","type":"exact"}],"termid":"GO:0015879"}


id: GO:0004657
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70659],"is_not":false,"summary":null,"term":"GO:0004657"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + a quinone = (S)-1-pyrroline-5-carboxylate + a quinol + H+.","definition_xrefs":["RHEA:23784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","termid":"GO:0016649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"proline dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70670","Reactome:R-HSA-8955817","Reactome:R-HSA-6784224","EC:1.5.5.2","MetaCyc:RXN-14903"],"synonyms":[{"name":"L-proline dehydrogenase activity","type":"related"},{"name":"proline oxidase activity","type":"exact"}],"termid":"GO:0004657","terms_by_termid":{"GO:0004657":null}}


id: MONDO:0021723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tightness of the vaginal wall during vaginal penetration including sexual intercourse. It is caused by involuntary spasm of the pelvic floor muscles, and results in painful intercourse or failure to have intercourse. It may due to psychological conditions, trauma in the vaginal area, or vaginal infection.","definition_xrefs":["NCIT:C78703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginismus","secondary_identifiers":["MESH:D052065","ICD10CM:N94.2","UMLS:C2004487","MEDGEN:412150"],"synonyms":[{"name":"myalgia of pelvic floor","type":"exact"},{"name":"vaginismus","type":"exact"}],"termid":"MONDO:0021723","xrefs":{"Monarch":{"xref_id":"0021723"}}}


id: GO:0051087
data:
  {"annotated_genes":["SJAG_03135","SJAG_01121","SJAG_01684","SJAG_00574","SJAG_00066","SJAG_04817","SJAG_00564","SJAG_04228","SJAG_04336","SJAG_03784","SJAG_01160","SJAG_03094","SJAG_01914","SJAG_00436","SJAG_02077","SJAG_04518","SJAG_01737","SJAG_01545","SJAG_04187","SJAG_03794","SJAG_04014","SJAG_03955","SJAG_00403"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58360,59146,61186,67213,67361,68539,70333,70612,72067,73316,75012,76464,76900,77933,79419,79499],"is_not":false,"summary":null,"term":"GO:0051087"},{"annotations":[71269,80349,80138,59109,66734,67236,78150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"}]},"cv_name":"molecular_function","definition":"Binding to a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.","definition_xrefs":["PMID:10585443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00403":null,"SJAG_00436":null,"SJAG_00564":null,"SJAG_00574":null,"SJAG_01121":null,"SJAG_01160":null,"SJAG_01545":null,"SJAG_01684":null,"SJAG_01737":null,"SJAG_01914":null,"SJAG_02077":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03784":null,"SJAG_03794":null,"SJAG_03955":null,"SJAG_04014":null,"SJAG_04187":null,"SJAG_04228":null,"SJAG_04336":null,"SJAG_04518":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein-folding chaperone binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"chaperone binding","type":"broad"},{"name":"chaperone protein binding","type":"exact"},{"name":"co-chaperone activity","type":"related"},{"name":"co-chaperonin activity","type":"related"}],"termid":"GO:0051087","terms_by_termid":{"GO:0030544":null,"GO:0051087":null}}


id: PBO:0110418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNE3 antisense RNA 1","termid":"PBO:0110418"}


id: FYECO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes a defined growth medium, i.e. one in which all constituent substances and their concentrations are known.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping defined medium","termid":"FYECO:0000013"}


id: GO:0006403
data:
  {"annotated_genes":["SJAG_03300","SJAG_01185","SJAG_04148","SJAG_03358","SJAG_04645","SJAG_04472","SJAG_01529","SJAG_04536","SJAG_00298","SJAG_01083","SJAG_04480","SJAG_02274","SJAG_02534","SJAG_00992","SJAG_03729","SJAG_02520","SJAG_04589","SJAG_01467","SJAG_04202","SJAG_04083","SJAG_00178","SJAG_00375","SJAG_02425","SJAG_00641","SJAG_04115","SJAG_03283","SJAG_04310","SJAG_01584","SJAG_01065","SJAG_02209","SJAG_01374","SJAG_04656","SJAG_01449","SJAG_04379","SJAG_04347","SJAG_02661","SJAG_04360","SJAG_04017","SJAG_02757","SJAG_01013","SJAG_05328","SJAG_03593","SJAG_01652","SJAG_01715","SJAG_03986","SJAG_03002","SJAG_03470","SJAG_04622","SJAG_00471","SJAG_00093","SJAG_03847","SJAG_03299","SJAG_03156","SJAG_02704","SJAG_04721","SJAG_03693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61261,62654,101514,117656,89842,77043,74491,80528,73139,77871,73212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006406"},{"annotations":[73565],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031990"},{"annotations":[58272,59796,64756],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051028"},{"annotations":[96891,77678,97303,101758,116444,74864,71810,73560,74328,116704,92554,102226,110241,104306,73398,80778,103013,112137,108008,114848,76075,116191,119321,111509,74014,110812,118415,75089,70216,74598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016973"},{"annotations":[96484,75528,80390,105434,75836,94351],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006405"},{"annotations":[102919],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006404"},{"annotations":[105649,72396,78923,106122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006409"},{"annotations":[79491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016031"},{"annotations":[79941],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"A process in which RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA localisation","type":"exact"},{"name":"establishment and maintenance of RNA localization","type":"exact"}],"termid":"GO:0006403","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: GO:0072553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a terminal button. A terminal button is the terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal button organization","synonyms":[{"name":"bouton organization","type":"exact"},{"name":"presynaptic bouton organization","type":"exact"},{"name":"synaptic bouton organization","type":"exact"},{"name":"terminal bouton organization","type":"exact"},{"name":"terminal button organisation","type":"exact"}],"termid":"GO:0072553"}


id: PBO:0064068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 102","termid":"PBO:0064068"}


id: PBO:0088021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP A protein; homolog of human U1-A; involved in nuclear mRNA splicing","termid":"PBO:0088021"}


id: PBO:0078843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 5-1","termid":"PBO:0078843"}


id: MOD:00715
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a methylated isoleucine residue, such as N-methyl-L-isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated isoleucine","synonyms":[{"name":"MeIle","type":"exact"}],"termid":"MOD:00715"}


id: PR:O59835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase delta subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14303:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.02c","secondary_identifiers":["UniProtKB:O59835"],"synonyms":[{"name":"SPBC12D12.02c","type":"related"},{"name":"Spom972h-POLD4","type":"exact"}],"termid":"PR:O59835"}


id: MONDO:0012362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PLN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1P","secondary_identifiers":["MESH:C563690","OMIM:609909","GARD:15469","DOID:0110439","MEDGEN:322782","UMLS:C1835928"],"synonyms":[{"name":"CMD1P","type":"exact"},{"name":"PLN familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1P","type":"exact"},{"name":"cardiomyopathy, dilated, type 1P","type":"exact"},{"name":"dilated cardiomyopathy type 1P","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PLN","type":"exact"}],"termid":"MONDO:0012362","xrefs":{"Monarch":{"xref_id":"0012362"}}}


id: PBO:0062487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 3","termid":"PBO:0062487"}


id: GO:0046124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a purine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside catabolic process","termid":"GO:0006152"},{"relation_name":"is_a","term_name":"deoxyribonucleoside catabolic process","termid":"GO:0046121"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside catabolic process","synonyms":[{"name":"purine deoxyribonucleoside breakdown","type":"exact"},{"name":"purine deoxyribonucleoside catabolism","type":"exact"},{"name":"purine deoxyribonucleoside degradation","type":"exact"}],"termid":"GO:0046124"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: GO:1902700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to butan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:19539744","PMID:18727018","GO_REF:0000093"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to butan-1-ol (obsolete GO:1902700)","synonyms":[{"name":"pentose breakdown to butan-1-ol","type":"exact"},{"name":"pentose catabolic process to 1-butanol","type":"exact"},{"name":"pentose catabolic process to butanol","type":"exact"},{"name":"pentose catabolism to butan-1-ol","type":"exact"},{"name":"pentose degradation to butan-1-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902700"}


id: MONDO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 12, with microvillus atrophy","secondary_identifiers":["MEDGEN:1794152","OMIM:619445","UMLS:C5561942"],"synonyms":[{"name":"DIAR12","type":"exact"},{"name":"diarrhea 12, with microvillus atrophy","type":"exact"},{"name":"microvillus inclusion disease 2","type":"exact"}],"termid":"MONDO:0030335","xrefs":{"Monarch":{"xref_id":"0030335"}}}


id: PBO:0039562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54 pseudogene 1","termid":"PBO:0039562"}


id: MONDO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of arteriosclerosis in which calcification of the tunica media is the predominant feature.","definition_xrefs":["NCIT:C35770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monckeberg arteriosclerosis","secondary_identifiers":["UMLS:C0887866","DOID:5161","MEDGEN:165784"],"synonyms":[{"name":"Mönckeberg arteriosclerosis","type":"exact"}],"termid":"MONDO:0003310","xrefs":{"Monarch":{"xref_id":"0003310"}}}


id: PR:Q9HFF2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.02c","synonyms":[{"name":"Spom972h-SPAC683.02c","type":"exact"}],"termid":"PR:Q9HFF2"}


id: PBO:0090797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop8","termid":"PBO:0090797"}


id: PBO:0029762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vacuolated_vegetative_cell","termid":"PBO:0029762"}


id: MONDO:1010699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in sheep due to a mutation in the PFKM gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, PFKM-related, dog","secondary_identifiers":["OMIA:000421-9615"],"synonyms":[{"name":"glycogen storage disease VII, dog","type":"related"},{"name":"phosphofructokinase deficiency, dog","type":"exact"}],"termid":"MONDO:1010699","xrefs":{"Monarch":{"xref_id":"1010699"}}}


id: GO:0060104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense, amorphous envelope that comprises the outermost layer of the cuticle. The surface coat is loosely apposed to the epicuticle, has distinct biochemical properties, is synthesized by cells other than the underlying hypodermis, and is labile. In addition to serving as a lubricant to protect against abrasion and dehydration, the surface coat may also play important roles in infection and immune evasion. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:dph","GOC:kmv","ISSN:15518507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"surface coat of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"surface coat of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060104"}


id: GO:1903687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of border follicle cell migration.","definition_xrefs":["PMID:18394891","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell migration","termid":"GO:0010633"},{"relation_name":"is_a","term_name":"regulation of border follicle cell migration","termid":"GO:1903684"},{"relation_name":"negatively_regulates","term_name":"border follicle cell migration","termid":"GO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of border follicle cell migration","synonyms":[{"name":"inhibition of border follicle cell migration","type":"narrow"}],"termid":"GO:1903687"}


id: MONDO:0009103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diaphragmatic hernia","termid":"MONDO:0005711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia 2","secondary_identifiers":["UMLS:C1857284","OMIM:222400","MEDGEN:347411","MESH:C565629","GARD:15161"],"synonyms":[{"name":"DIH2","type":"related"},{"name":"diaphragmatic hernia 2","type":"exact"},{"name":"hernia, congenital diaphragmatic 2","type":"exact"}],"termid":"MONDO:0009103","xrefs":{"Monarch":{"xref_id":"0009103"}}}


id: GO:0015766
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[96128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"disaccharide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015766","terms_by_termid":{"GO:0106081":null,"GO:0106082":null}}


id: PBO:0053783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1034","termid":"PBO:0053783"}


id: MONDO:0031240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"panic disorder","termid":"MONDO:0005383"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial panic disorder","secondary_identifiers":["OMIMPS:167870"],"termid":"MONDO:0031240","xrefs":{"Monarch":{"xref_id":"0031240"}}}


id: PBO:0049625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 28","termid":"PBO:0049625"}


id: PBO:0005120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt4 (predicted)","termid":"PBO:0005120"}


id: PBO:0031047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_acetylation","termid":"PBO:0031047"}


id: MONDO:0002813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm arising from adipocytes.","definition_xrefs":["NCIT:C4501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"tumor of adipose tissue","termid":"MONDO:0021354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lipomatous cancer","secondary_identifiers":["DOID:3939","SCTID:254828009","ICD9:171.9"],"synonyms":[{"name":"adipose tissue cancer","type":"exact"},{"name":"cancer of adipose tissue","type":"exact"},{"name":"malignant adipose tissue neoplasm","type":"exact"},{"name":"malignant adipose tissue tumor","type":"exact"},{"name":"malignant adipose tissue tumour","type":"exact"},{"name":"malignant lipomatous neoplasm","type":"exact"},{"name":"malignant lipomatous tumor","type":"exact"},{"name":"malignant lipomatous tumour","type":"exact"},{"name":"malignant neoplasm of adipose tissue","type":"exact"},{"name":"malignant neoplasm of the adipose tissue","type":"exact"},{"name":"malignant tumor of adipose tissue","type":"exact"},{"name":"malignant tumor of the adipose tissue","type":"exact"},{"name":"malignant tumour of adipose tissue","type":"exact"},{"name":"malignant tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0002813","xrefs":{"Monarch":{"xref_id":"0002813"}}}


id: PBO:0073683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 5","termid":"PBO:0073683"}


id: PBO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR70 family","termid":"PBO:0001111"}


id: MONDO:0011806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, usually self-limited fibro-osseous lesion of the bone that affects infants and children. It usually arises from the cortical bone of the anterior mid-shaft of the tibia. Patients usually present with swelling or painless bowing of the tibia. Progression to adamantinoma has been reported in some cases.","definition_xrefs":["NCIT:C53970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteofibrous dysplasia","secondary_identifiers":["UMLS:C4085248","MESH:C563787","MEDGEN:895748","MESH:C563276","OMIM:607278","OMIM:609143","Orphanet:488265","GARD:10887"],"synonyms":[{"name":"Kempson-Campanacci lesion","type":"exact"},{"name":"OFD","type":"exact"},{"name":"OSFD","type":"exact"},{"name":"cortical fibrous dysplasia","type":"exact"},{"name":"ossifying fibroma of long bones","type":"exact"},{"name":"osteofibrous dysplasia","type":"exact"},{"name":"osteofibrous dysplasia of bone","type":"exact"},{"name":"osteofibrous dysplasia, susceptibility to","type":"related"},{"name":"tibia, bowing of, with pseudarthrosis and pectus excavatum","type":"exact"}],"termid":"MONDO:0011806","xrefs":{"Monarch":{"xref_id":"0011806"}}}


id: PBO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-O","termid":"PBO:0090185"}


id: GO:0047521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-alpha,7-alpha,12-beta-trihydroxy-5-beta-cholanate + NADP+ = 3-alpha,7-alpha-dihydroxy-12-oxo-5-beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:21424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"12-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R03495","EC:1.1.1.238","MetaCyc:12-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"12beta-hydroxy steroid (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"},{"name":"3alpha,7alpha,12beta-trihydroxy-5beta-cholanate dehydrogenase activity","type":"broad"}],"termid":"GO:0047521"}


id: PBO:0012552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1 family chromodomain protein Swi6","termid":"PBO:0012552"}


id: PBO:0031063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube","termid":"PBO:0031063"}


id: FYPO:0003541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to spindle pole body","termid":"FYPO:0001836"},{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body","type":"exact"},{"name":"normal protein localization to meiotic SPB","type":"exact"}],"termid":"FYPO:0003541"}


id: PBO:0003939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1 (predicted)","termid":"PBO:0003939"}


id: FYPO:0000096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cadmium. Cells stop growing (and may die) at a concentration of cadmium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cadmium","synonyms":[{"name":"hypersensitive to cadmium","type":"exact"},{"name":"sensitive to cadmium during mitotic cell cycle","type":"related"},{"name":"sensitive to cadmium during vegetative growth","type":"exact"},{"name":"sensitive to cadmium ions","type":"exact"}],"termid":"FYPO:0000096"}


id: MONDO:0005924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pneumocystosis (obsolete MONDO:0005924)","termid":"MONDO:0005924","xrefs":{"Monarch":{"xref_id":"0005924"}}}


id: PBO:0071482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 23","termid":"PBO:0071482"}


id: FYPO:0003267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal acid phosphatase activity","termid":"FYPO:0003267"}


id: PBO:0047152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member B, pseudogene","termid":"PBO:0047152"}


id: MONDO:1011920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow-semen syndrome, non-human animal","secondary_identifiers":["OMIA:001304"],"termid":"MONDO:1011920","xrefs":{"Monarch":{"xref_id":"1011920"}}}


id: GO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via cytolysis of symbiont cells. Cytolysis is the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by symbiont cytolysis (obsolete GO:0044051)","synonyms":[{"name":"interaction with host via substance released by cytolysis of symbiont","type":"exact"}],"termid":"GO:0044051"}


id: GO:0050012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 juglone + O2 = 2 3,5-dihydroxy-1,4-naphthoquinone + 2 H+.","definition_xrefs":["RHEA:18745","PMID:4041238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"juglone 3-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R04327","MetaCyc:JUGLONE-3-MONOOXYGENASE-RXN","EC:1.17.3.4"],"synonyms":[{"name":"5-hydroxy-1,4-naphthoquinone,hydrogen-donor:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"juglone 3-monooxygenase activity","type":"exact"},{"name":"juglone hydroxylase activity","type":"exact"},{"name":"naphthoquinone hydroxylase activity","type":"related"}],"termid":"GO:0050012"}


id: PBO:0086282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a putative role in response to acid stress; null mutant is sensitive to acetic acid; transcription is regulated by Haa1p and induced in the presence of acetic acid; protein observed in plasma membrane foci in the presence of acetic acid; the authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies","termid":"PBO:0086282"}


id: GO:0003960
data:
  {"annotated_genes":["SJAG_03476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74743],"is_not":false,"summary":null,"term":"GO:0003960"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone.","definition_xrefs":["EC:1.6.5.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH dehydrogenase activity","termid":"GO:0003959"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADPH:quinone reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6799722","MetaCyc:QOR-RXN","RHEA:14269"],"synonyms":[{"name":"NADPH:quinone oxidoreductase activity","type":"related"},{"name":"quinone oxidoreductase activity","type":"broad"},{"name":"zeta-crystallin activity","type":"narrow"}],"termid":"GO:0003960","terms_by_termid":{"GO:0003960":null}}


id: PBO:0049919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif like","termid":"PBO:0049919"}


id: MONDO:0054780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"elliptocytosis 3","secondary_identifiers":["GARD:16273","MESH:C566678","OMIM:617948","UMLS:C1866810","MEDGEN:357139"],"synonyms":[{"name":"EL3","type":"related"},{"name":"anemia, neonatal hemolytic, fatal or near-fatal","type":"exact"},{"name":"anemia, perinatal hemolytic, fatal or near-fatal","type":"related"},{"name":"elliptocytosis 3","type":"exact"},{"name":"elliptocytosis-3","type":"exact"}],"termid":"MONDO:0054780","xrefs":{"Monarch":{"xref_id":"0054780"}}}


id: CHEBI:35176
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc sulfate","termid":"CHEBI:35176"}


id: FYPO:0000585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall biogenesis does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"},{"relation_name":"is_a","term_name":"abolished cell wall biogenesis","termid":"FYPO:0003639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"abolished ascospore wall biogenesis","synonyms":[{"name":"absent spore wall formation","type":"related"},{"name":"ascospore wall biogenesis abolished","type":"exact"},{"name":"spore wall formation abolished","type":"related"},{"name":"spore wall formation: absent","type":"related"}],"termid":"FYPO:0000585"}


id: PBO:0052845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-1","termid":"PBO:0052845"}


id: GO:0140890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone chaperone that carries a H1 histone.","definition_xrefs":["PMID:12509435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0003674","GO:0140597","GO:0140104"],"is_obsolete":false,"name":"H1 histone chaperone activity","synonyms":[{"name":"H1 histone carrier activity","type":"exact"}],"termid":"GO:0140890"}


id: PBO:0061784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCLN pseudogene 1","termid":"PBO:0061784"}


id: PBO:0063902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Y","termid":"PBO:0063902"}


id: PBO:0011455
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k_cat(x10-3sec-1) for base excision activity of N7-methylguanine = 2.6","termid":"PBO:0011455"}


id: PBO:0044153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDNEP1 pseudogene 2","termid":"PBO:0044153"}


id: PBO:0085552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the synaptonemal complex axial elements; involved in chromosome segregation during the first meiotic division; critical for coupling checkpoint signaling to SC formation; promotes interhomolog recombination by phosphorylating Hop1p; also interacts with Mec3p and Ddc1p","termid":"PBO:0085552"}


id: GO:0050454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme F420 + H(2) + H+ = reduced coenzyme F420.","definition_xrefs":["RHEA:23760","EC:1.12.98.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420 hydrogenase activity","secondary_identifiers":["MetaCyc:COENZYME-F420-HYDROGENASE-RXN","KEGG_REACTION:R03025"],"synonyms":[{"name":"8-hydroxy-5-deazaflavin-reducing hydrogenase activity","type":"related"},{"name":"F420-reducing hydrogenase activity","type":"related"},{"name":"coenzyme F420-dependent hydrogenase activity","type":"related"},{"name":"hydrogen:coenzyme F420 oxidoreductase activity","type":"related"}],"termid":"GO:0050454"}


id: PBO:0070209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 137 pseudogene","termid":"PBO:0070209"}


id: PBO:0067511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 652, pseudogene","termid":"PBO:0067511"}


id: PBO:0086277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catalytic domains but does not exhibit this enzymatic activity; homologous to Sol3p and Sol4p; SOL2 has a paralog, SOL1, that arose from the whole genome duplication","termid":"PBO:0086277"}


id: PBO:0077707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNNI3 interacting kinase","termid":"PBO:0077707"}


id: PBO:0028349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_M_phase","termid":"PBO:0028349"}


id: GO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the late distal convoluted tubule over time, from its formation to the mature structure. The late distal convoluted tubule contains DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late distal convoluted tubule development","termid":"GO:0072068"}


id: GO:0033409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UAU codon-amino acid adaptor activity","synonyms":[{"name":"TAT codon-amino acid adaptor activity","type":"exact"},{"name":"tyrosine tRNA","type":"related"}],"termid":"GO:0033409"}


id: PBO:0087564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of structure-specific Mms4p-Mus81p endonuclease; cleaves branched DNA; involved in DNA repair, replication fork stability, and joint molecule formation/resolution during meiotic recombination; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); helix-hairpin-helix protein; phosphorylation of non-catalytic subunit Mms4p by Cdc28p and Cdcp during mitotic cell cycle activates function of Mms4p-Mus81p","termid":"PBO:0087564"}


id: GO:0047088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrosanguinarine + H+ + NADPH + O2 = 10-hydroxydihydrosanguinarine + H2O + NADP+.","definition_xrefs":["RHEA:10528","EC:1.14.14.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydrosanguinarine 10-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.56-RXN","KEGG_REACTION:R04702"],"synonyms":[{"name":"dihydrosanguinarine 10-hydroxylase activity","type":"exact"},{"name":"dihydrosanguinarine,NADPH:oxygen oxidoreductase (10-hydroxylating)","type":"related"}],"termid":"GO:0047088"}


id: PBO:0061982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 4","termid":"PBO:0061982"}


id: GO:1900410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900410)","termid":"GO:1900410"}


id: PBO:0081966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZPR1 pseudogene 1","termid":"PBO:0081966"}


id: GO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an cytidine-uridine dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA cytidine-uridine insertion","synonyms":[{"name":"RNA CU insertion","type":"exact"}],"termid":"GO:0070712"}


id: PBO:0075188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G","termid":"PBO:0075188"}


id: PBO:0079081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 2-1","termid":"PBO:0079081"}


id: MONDO:0003479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumonia that is an acute inflammation of the lungs induced by inhalation of metal fumes or toxic gasses and vapors. It is a sentinel health event (occupational) associated with exposure to ammonia (refrigeration, fertilizer, and oil refining industries), chlorine (alkali and bleach industries), nitrogen oxides (silo fillers, arc welders, and nitric acid industry), sulfur dioxide (paper, refrigeration, and oil refining industries), cadmium (processors and cadmium smelters), trimellitic anhydride (plastics and organic chemical synthesis), and vanadium pentoxide (boilermakers). The two types of pulmonary agents are central and peripheral. Central pulmonary agents, for example, ammonia, are water soluble irritants that injure the upper airways. Peripheral pulmonary agents, for example, phosgene, NOx, and PFIB, are slightly water soluble irritants that injure the alveolar-capillary membranes. Chlorine has both central and peripheral effects.","definition_xrefs":["DOID:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic pneumonitis","secondary_identifiers":["SCTID:233733000","UMLS:C3714582","ICD9:506.9","MEDGEN:811389"],"synonyms":[{"name":"acute chemical fume pulmonary edema","type":"exact"},{"name":"acute chemical fume pulmonary oedema","type":"exact"},{"name":"acute chemical pulmonary edema","type":"exact"},{"name":"acute chemical pulmonary oedema","type":"exact"}],"termid":"MONDO:0003479","xrefs":{"Monarch":{"xref_id":"0003479"}}}


id: GO:0015929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of hexosamine or N-acetylhexosamine residues (e.g. N-acetylglucosamine) residues from gangliosides or other glycoside oligosaccharides.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"hexosaminidase activity","termid":"GO:0015929"}


id: PBO:0084419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major exo-1,3-beta-glucanase of the cell wall; involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes; EXG1 has a paralog, SPR1, that arose from the whole genome duplication","termid":"PBO:0084419"}


id: PBO:0054781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2194","termid":"PBO:0054781"}


id: GO:0150015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree, which emerges near the apical pole of a neuron, and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["PMID:9214543","GOC:aruk","GOC:bc","PMID:16899232","PMID:1720142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical proximal dendrite","termid":"GO:0150015"}


id: GO:0046202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"cyanide metabolic process","termid":"GO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide biosynthetic process","synonyms":[{"name":"cyanide anabolism","type":"exact"},{"name":"cyanide biosynthesis","type":"exact"},{"name":"cyanide formation","type":"exact"},{"name":"cyanide synthesis","type":"exact"}],"termid":"GO:0046202"}


id: GO:0016442
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.","definition_xrefs":["PMID:10749213","PMID:15145345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RISC complex","secondary_identifiers":["Wikipedia:RNA-induced_silencing_complex","GO:0035068"],"synonyms":[{"name":"RNA-induced silencing complex","type":"exact"},{"name":"miRNP complex","type":"related"},{"name":"micro-ribonucleoprotein complex","type":"related"}],"termid":"GO:0016442"}


id: PBO:0028779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028779"}


id: PBO:0078866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 1","termid":"PBO:0078866"}


id: GO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"complement component C5a binding","termid":"GO:0001856"}


id: GO:0042139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form small, electron dense structures in association with meiotic chromosomes during leptotene and zygotene.","definition_xrefs":["PMID:9334324","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination nodule assembly","termid":"GO:0007146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006259","GO:0065003","GO:0006310","GO:0044085","GO:0006281"],"is_obsolete":false,"name":"early meiotic recombination nodule assembly","termid":"GO:0042139"}


id: MONDO:1010099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyruvate kinase deficiency of erythrocyte that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"},{"relation_name":"is_a","term_name":"anemia, non-human animal","termid":"MONDO:1012981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase deficiency of erythrocyte, non-human animal","secondary_identifiers":["OMIA:000844"],"termid":"MONDO:1010099","xrefs":{"Monarch":{"xref_id":"1010099"}}}


id: GO:2000517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell activation","synonyms":[{"name":"regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000517"}


id: MONDO:0015080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic tumor (obsolete MONDO:0015080)","termid":"MONDO:0015080","xrefs":{"Monarch":{"xref_id":"0015080"}}}


id: PBO:0027689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_branched,_curved,_elongated_cell","termid":"PBO:0027689"}


id: MONDO:0015591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limbic encephalitis associated with antibodies to cell membrane antigens (obsolete MONDO:0015591)","secondary_identifiers":["Orphanet:163903"],"termid":"MONDO:0015591","xrefs":{"Monarch":{"xref_id":"0015591"}}}


id: PBO:0040427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 4","termid":"PBO:0040427"}


id: PBO:0074422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 21","termid":"PBO:0074422"}


id: GO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of glial cell proliferation.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"positively_regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell proliferation","termid":"GO:0060252"}


id: PBO:0058978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutL homolog 3","termid":"PBO:0058978"}


id: GO:0141154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the host shutoff of host translation, a host response that prevents mRNA in the cell to be translated, to prevent the symbiont from expressing its genes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20563710","PMID:21622569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host-directed shutoff of host translation","termid":"GO:0141154"}


id: GO:0019284
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98881],"is_not":false,"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from S-adenosylmethionine.","definition_xrefs":["GOC:go_curators","PMID:31950558","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"},{"relation_name":"part_of","term_name":"S-adenosylmethionine cycle","termid":"GO:0033353"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"L-methionine salvage from S-adenosylmethionine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-methionine formation from S-adenosylmethionine","type":"exact"},{"name":"L-methionine synthesis from S-adenosylmethionine","type":"exact"}],"termid":"GO:0019284","terms_by_termid":{"GO:0019284":null}}


id: FYPO:0006952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of N2-acetyl-L-lysine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular N2-acetyl-L-lysine level","synonyms":[{"name":"increased N2-acetyl-L-lysine accumulation","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during mitotic cell cycle","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during vegetative growth","type":"exact"},{"name":"increased cellular N2-acetyl-lysine level","type":"exact"}],"termid":"FYPO:0006952"}


id: PBO:0083116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; binds tightly to ssDNA, which disrupts interaction with the MCM helicase and stalls it during replication stress; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes","termid":"PBO:0083116"}


id: PBO:0080916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 5","termid":"PBO:0080916"}


id: PBO:0086934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi","termid":"PBO:0086934"}


id: PBO:0088033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding endonuclease involved in mRNA decay; recruited to stalled ribosomes to promote breakdown of transcript body of nuclear-transcribed mRNA with stalls in translation elongation; cleaves mRNA within A site of colliding ribosome; has two CUE domains that bind ubiquitin, which may facilitate intramolecular monoubiquitination","termid":"PBO:0088033"}


id: PR:000030002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"Spom-CHEK2","type":"exact"}],"termid":"PR:000030002"}


id: MONDO:0005056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Squamous cell carcinomas with morphologically prominent production of keratin.","definition_xrefs":["NCIT:C4105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"keratinizing squamous cell carcinoma","secondary_identifiers":["ICDO:8071/3","UMLS:C0334247","EFO:0000559","MEDGEN:137730","DOID:5521"],"synonyms":[{"name":"keratinizing epidermoid carcinoma","type":"exact"},{"name":"keratinizing squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma, keratinizing","type":"exact"},{"name":"squamous cell carcinoma, keratinizing (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005056","xrefs":{"Monarch":{"xref_id":"0005056"}}}


id: SO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A signal for RNA polymerase to terminate transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminator","termid":"SO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_terminator","synonyms":[{"name":"eukaryotic terminator","type":"exact"}],"termid":"SO:0000951"}


id: MONDO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hairy Cell Leukemia variant (HCL-V) is defined as a rare and indolent form of small, mature, B-cell leukemia characterized by splenomegaly, an elevated white blood cell (WBC) count and hyper-cellular bone marrow. HCL-V is more aggressive and resistant to therapy than classical HCL (HCL-C).","definition_xrefs":["Orphanet:300878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy cell leukemia","termid":"MONDO:0018935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hairy cell leukemia variant","secondary_identifiers":["DOID:713","ICDO:9591/3","MEDGEN:91160","NCIT:C7401","GARD:21249","SCTID:277568007","UMLS:C0349633","MedDRA:10019054"],"synonyms":[{"name":"HCL-V","type":"exact"},{"name":"HCL-v","type":"exact"},{"name":"hairy cell leukemia variant","type":"exact"},{"name":"leukemic reticuloendotheliosis variant","type":"exact"},{"name":"prolymphocytic variant of HCL","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukaemia","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukemia","type":"exact"}],"termid":"MONDO:0017600","xrefs":{"Monarch":{"xref_id":"0017600"}}}


id: PBO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex subunit Get1 (predicted)","termid":"PBO:0004905"}


id: PBO:0078197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-7 (non-functional)","termid":"PBO:0078197"}


id: PBO:0064815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 6","termid":"PBO:0064815"}


id: GO:0033207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming a beta-1,4 linkage.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-1,4-N-acetylgalactosaminyltransferase activity (obsolete GO:0033207)","synonyms":[{"name":"beta-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0033207"}


id: MONDO:0100550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of myositis that affects only the orbital muscles.","definition_xrefs":["NCIT:C117296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy of extraocular muscle","termid":"MONDO:0004746"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"orbital myositis","secondary_identifiers":["MEDGEN:389999","ICD9:376.12","UMLS:C2350476","SCTID:80698001"],"synonyms":[{"name":"ocular myositis","type":"exact"}],"termid":"MONDO:0100550","xrefs":{"Monarch":{"xref_id":"0100550"}}}


id: FYPO:0005738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"abolished histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"abolished histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3S10 phosphorylation during vegetative growth","type":"exact"},{"name":"histone H3-S10 phosphorylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-S10 phosphorylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0005738"}


id: null:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"null:NCBI Taxonomy id"}


id: PBO:0007772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster biogenesis protein (predicted)","termid":"PBO:0007772"}


id: MONDO:0100071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiocutaneous syndromes are those in which phenotypic manifestations occur in the heart, skin, and/or hair. Variation in the genes of interest may occur in both an autosomal dominant inheritance pattern and autosomal recessive, which may lead to earlier and/or more severe phenotypic presentation.","definition_xrefs":["PMID:27933191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiocutaneous syndrome","secondary_identifiers":["MEDGEN:1843498","UMLS:C0543816"],"termid":"MONDO:0100071","xrefs":{"Monarch":{"xref_id":"0100071"}}}


id: GO:1904686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25963819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of mitotic spindle disassembly","synonyms":[{"name":"regulation of mitotic spindle breakdown","type":"exact"},{"name":"regulation of mitotic spindle catabolism","type":"exact"},{"name":"regulation of mitotic spindle degradation","type":"exact"},{"name":"regulation of spindle breakdown during mitosis","type":"exact"},{"name":"regulation of spindle degradation during mitosis","type":"exact"},{"name":"regulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904686"}


id: PR:Q9UTI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gammaproteobacterial-type dihydroorotase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.03c","secondary_identifiers":["UniProtKB:Q9UTI0"],"synonyms":[{"name":"DHOase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gammaproteo-pyrC","type":"exact"}],"termid":"PR:Q9UTI0"}


id: GO:0009177
data:
  {"annotated_genes":["SJAG_03771","SJAG_04487","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70328,79852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[79825,70327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxynucleoside monophosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate biosynthetic process","termid":"GO:0009130"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009157"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009177","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: PBO:0047018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A21, pseudogene","termid":"PBO:0047018"}


id: PR:Q9URY7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URY7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formamidase C869.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.04","synonyms":[{"name":"Spom972h-SPAC869.04","type":"exact"},{"name":"formamide amidohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY7"}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: GO:0021711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature unipolar brush cell in the cerebellum. Differentiation includes the processes involved in commitment of a neuroblast to a unipolar brush cell fate. A unipolar brush cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar unipolar brush cell differentiation","termid":"GO:0021711"}


id: MONDO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic respiratory disease caused by the visna-maedi virus. It was formerly believed to be identical with jaagsiekte (pulmonary adenomatosis, ovine) but is now recognized as a separate entity.","definition_xrefs":["MESH:D011021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, progressive interstitial, of sheep","synonyms":[{"name":"Maedi","type":"related"},{"name":"progressive interstitial pneumonia of sheep","type":"related"}],"termid":"MONDO:0025453","xrefs":{"Monarch":{"xref_id":"0025453"}}}


id: MONDO:0013582
data:
  {"annotated_genes":["SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86290],"is_not":false,"summary":null,"term":"MONDO:0013582"}]},"cv_name":"mondo","definition":"Any mosaic variegated aneuploidy syndrome in which the cause of the disease is a mutation in the CEP57 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02795":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C168989","DOID:0080142","MEDGEN:481473","OMIM:614114","GARD:15758","UMLS:C3279843"],"synonyms":[{"name":"CEP57 mosaic variegated aneuploidy syndrome","type":"exact"},{"name":"MOSAIC variegated aneuploidy syndrome 2","type":"related"},{"name":"MVA2","type":"related"},{"name":"Mosaic variegated aneuploidy syndrome type 2","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome 2","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome caused by mutation in CEP57","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome type 2","type":"exact"}],"termid":"MONDO:0013582","terms_by_termid":{"MONDO:0013582":null},"xrefs":{"Monarch":{"xref_id":"0013582"}}}


id: GO:0021983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pituitary gland development","synonyms":[{"name":"hypophysis development","type":"related"}],"termid":"GO:0021983"}


id: PBO:0054170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1543","termid":"PBO:0054170"}


id: PBO:0028722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_cell_cycle_arrest_in_mitotic_interphase,_elongated_cells","termid":"PBO:0028722"}


id: GO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on free oxidized methionine with specificity for the R enantiomer; does not act on oxidized methionine in peptide linkage. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["PMID:19049972","PMID:17535911","GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine-R-sulfoxide reductase activity (obsolete GO:0070191)","termid":"GO:0070191"}


id: MONDO:0800261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thyroid disease, susceptibility to, 5","secondary_identifiers":["UMLS:C2748621","MEDGEN:411625"],"synonyms":[{"name":"AITD5","type":"exact"}],"termid":"MONDO:0800261","xrefs":{"Monarch":{"xref_id":"0800261"}}}


id: PBO:0057899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3201","termid":"PBO:0057899"}


id: PBO:0054510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1910","termid":"PBO:0054510"}


id: GO:0021540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the corpus callosum are generated and organized. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"corpus callosum development","termid":"GO:0022038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpus callosum morphogenesis","termid":"GO:0021540"}


id: MONDO:0015930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete respiratory malformation (obsolete MONDO:0015930)","secondary_identifiers":["Orphanet:182111"],"termid":"MONDO:0015930","xrefs":{"Monarch":{"xref_id":"0015930"}}}


id: PBO:0048007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 1","termid":"PBO:0048007"}


id: PBO:0043166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class II major histocompatibility complex transactivator","termid":"PBO:0043166"}


id: MONDO:0859184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly and arthrogryposis","secondary_identifiers":["OMIM:619501","UMLS:C5561973","MEDGEN:1794183"],"termid":"MONDO:0859184","xrefs":{"Monarch":{"xref_id":"0859184"}}}


id: MONDO:0010783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alzheimer disease, susceptibility to, mitochondrial (obsolete MONDO:0010783)","termid":"MONDO:0010783","xrefs":{"Monarch":{"xref_id":"0010783"}}}


id: FYPO:0005836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip does not occur. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"abolished protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport along microtubule to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005836"}


id: PBO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Ppk11","termid":"PBO:0002452"}


id: FYPO:0003282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of superoxide dismutase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000298","FYPO:0000002","FYPO:0000654","FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased superoxide dismutase activity","synonyms":[{"name":"reduced superoxide dismutase activity","type":"exact"}],"termid":"FYPO:0003282"}


id: PBO:0059171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 2","termid":"PBO:0059171"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: MONDO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare and complex form of hereditary spastic paraplegia (see this term), reported in only 4 patients from 2 families to date, characterized by spastic paraplegia (presenting between the ages of 1 to 4 years with abnormal gait) associated with microcephaly, amyotrophy, cerebellar signs (e.g. dysarthria) aggressiveness, delayed puberty and mild to moderate intellectual disability. SPG64 is due to mutations in the ENTPD1 gene (10q24.1), encoding ectonucleoside triphosphate diphosphohydrolase 1.","definition_xrefs":["Orphanet:401810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 64","secondary_identifiers":["OMIM:615683","MEDGEN:816619","UMLS:C3810289","GARD:17659","SCTID:726609005","DOID:0110815"],"synonyms":[{"name":"ENTPD1 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG64","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ENTPD1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 64","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 64","type":"exact"},{"name":"hereditary spastic paraplegia type 64","type":"exact"},{"name":"spastic paraplegia 64, autosomal recessive","type":"related"}],"termid":"MONDO:0014303","xrefs":{"Monarch":{"xref_id":"0014303"}}}


id: PBO:0029649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_nucleus_during_vegetative_growth","termid":"PBO:0029649"}


id: PR:Q09780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mevalonate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10457:SF4","OMA:SCHPO00072","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.11c","secondary_identifiers":["UniProtKB:Q09780"],"synonyms":[{"name":"MK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVK","type":"exact"}],"termid":"PR:Q09780"}


id: GO:2000342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904208"],"synonyms":[{"name":"inhibition of CCL2 secretion","type":"narrow"},{"name":"inhibition of chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"negative regulation of CXCL2 production","type":"exact"},{"name":"negative regulation of MIP-2 production","type":"exact"},{"name":"negative regulation of MIP2 production","type":"exact"},{"name":"negative regulation of SCYB2 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000342"}


id: GO:0016676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor (obsolete GO:0016676)","synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, oxygen as acceptor","type":"exact"}],"termid":"GO:0016676"}


id: MONDO:0007983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schmid metaphyseal chondrodysplasia is a rare disorder characterized by moderately short stature with short limbs, coxa vara, bowlegs and an abnormal gait.","definition_xrefs":["Orphanet:174"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Schmid metaphyseal chondrodysplasia","secondary_identifiers":["OMIM:156500","SCTID:29248006","UMLS:C0265289","GARD:7029","MEDGEN:78550","DOID:0080021","MESH:C537352"],"synonyms":[{"name":"Japanese type spondylometaphyseal dysplasia","type":"exact"},{"name":"MCDS","type":"exact"},{"name":"Metaphyseal Chondrodysplasia, Schmid Type","type":"exact"},{"name":"Schmid type metaphyseal dysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia Schmid type","type":"exact"},{"name":"metaphyseal chondrodysplasia, Schmid type","type":"exact"},{"name":"spondylometaphyseal dysplasia, Japanese type","type":"exact"}],"termid":"MONDO:0007983","xrefs":{"Monarch":{"xref_id":"0007983"}}}


id: PBO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decorin","termid":"PBO:0044637"}


id: PBO:0061947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily X member 5 pseudogene","termid":"PBO:0061947"}


id: GO:0045680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R8 cell differentiation.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell differentiation","termid":"GO:0045679"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell differentiation","synonyms":[{"name":"down regulation of R8 differentiation","type":"exact"},{"name":"down-regulation of R8 differentiation","type":"exact"},{"name":"downregulation of R8 differentiation","type":"exact"},{"name":"inhibition of R8 differentiation","type":"narrow"},{"name":"negative regulation of R8 differentiation","type":"exact"}],"termid":"GO:0045680"}


id: SO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_trimethylation_site","synonyms":[{"name":"H3K9 tri-methylation site","type":"exact"},{"name":"H3K9Me3","type":"related"}],"termid":"SO:0001707"}


id: GO:0046649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte activation","termid":"GO:0046649"}


id: PBO:0080819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xyloside xylosyltransferase 1","termid":"PBO:0080819"}


id: GO:0050260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP + NH4 = 5-phospho-D-ribosylamine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.7","RHEA:13777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribose-5-phosphate-ammonia ligase activity","secondary_identifiers":["MetaCyc:RIBOSE-5-PHOSPHATE--AMMONIA-LIGASE-RXN","KEGG_REACTION:R01053"],"synonyms":[{"name":"5-phosphoribosylamine synthetase activity","type":"related"},{"name":"ammonia-ribose 5-phosphate aminotransferase activity","type":"related"},{"name":"ribose 5-phosphate aminotransferase activity","type":"related"},{"name":"ribose-5-phosphate:ammonia ligase (ADP-forming)","type":"related"}],"termid":"GO:0050260"}


id: PBO:0087332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin for late-Golgi enzymes; required to maintain late-Golgi resident enzymes in their proper location by recycling molecules from the prevacuolar compartment; contains a PX domain and sequence similarity to human Snx3p","termid":"PBO:0087332"}


id: PBO:0061337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B15","termid":"PBO:0061337"}


id: PBO:0063579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 2","termid":"PBO:0063579"}


id: PBO:0065744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYD and CARD domain containing","termid":"PBO:0065744"}


id: GO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:12169620","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"D-methionine transmembrane transport","termid":"GO:0048473"}


id: PBO:0078516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 2","termid":"PBO:0078516"}


id: PBO:0052970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 1","termid":"PBO:0052970"}


id: MONDO:0030089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005015","MONDO:0019254","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"diabetes mellitus, permanent neonatal 4","secondary_identifiers":["OMIM:618858","UMLS:C5394307","MEDGEN:1711191","GARD:16390"],"synonyms":[{"name":"DIABETES MELLITUS, PERMANENT NEONATAL 4","type":"exact"},{"name":"PNDM4","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 4","type":"exact"}],"termid":"MONDO:0030089","xrefs":{"Monarch":{"xref_id":"0030089"}}}


id: GO:0002726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"positively_regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of T cell cytokine production","synonyms":[{"name":"activation of T cell cytokine production","type":"narrow"},{"name":"positive regulation of T lymphocyte cytokine production","type":"exact"},{"name":"positive regulation of T-cell cytokine production","type":"exact"},{"name":"positive regulation of T-lymphocyte cytokine production","type":"exact"},{"name":"stimulation of T cell cytokine production","type":"narrow"},{"name":"up regulation of T cell cytokine production","type":"exact"},{"name":"up-regulation of T cell cytokine production","type":"exact"},{"name":"upregulation of T cell cytokine production","type":"exact"}],"termid":"GO:0002726"}


id: PBO:0059026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 15","termid":"PBO:0059026"}


id: PBO:0089585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing","termid":"PBO:0089585"}


id: PBO:0082335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein of unknown function; crystal structure resembles that of E.coli pantothenate kinase and other small kinases; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0082335"}


id: MONDO:0015866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant tumor of fallopian tubes (obsolete MONDO:0015866)","termid":"MONDO:0015866","xrefs":{"Monarch":{"xref_id":"0015866"}}}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: PBO:0013071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-Two Homolog","termid":"PBO:0013071"}


id: PBO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 13","termid":"PBO:0070547"}


id: PBO:0012588
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae IRA1","termid":"PBO:0012588"}


id: FYPO:0004222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004222"}


id: PBO:0064128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor alpha","termid":"PBO:0064128"}


id: PBO:0087263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein phosphatase Z, isoform of Ppz2p; involved in regulation of potassium transport, which affects osmotic stability, cell cycle progression, and halotolerance","termid":"PBO:0087263"}


id: PBO:0088290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26","termid":"PBO:0088290"}


id: PBO:0054134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1500","termid":"PBO:0054134"}


id: PBO:0077762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 4","termid":"PBO:0077762"}


id: FYPO:0003346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is abnormal at the silent mating-type cassettes. Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["GO:0007131","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic recombination at silent mating-type cassette","synonyms":[{"name":"DNA recombination defects, meiotic, at silent mating-type cassette","type":"exact"},{"name":"abnormal meiotic DNA recombination at silent mating-type cassette","type":"exact"},{"name":"abnormal meiotic recombination at mating-type region heterochromatin","type":"exact"},{"name":"abnormal reciprocal meiotic recombination at silent mating-type cassette","type":"exact"},{"name":"abnormal recombination at silent mating-type cassette","type":"broad"}],"termid":"FYPO:0003346"}


id: GO:0046226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of coumarins, compounds derived from the phenylacrylic skeleton of cinnamic acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"coumarin catabolic process","synonyms":[{"name":"coumarin breakdown","type":"exact"},{"name":"coumarin catabolism","type":"exact"},{"name":"coumarin degradation","type":"exact"}],"termid":"GO:0046226"}


id: PBO:0050184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 1","termid":"PBO:0050184"}


id: PATO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated yellow","synonyms":[{"name":"pale yellow","type":"exact"}],"termid":"PATO:0001286"}


id: GO:2000588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:2000586"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"positive regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000588"}


id: FYPO:0007473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange is abnormal during G0 phase. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["GO:0043486","PomBase:mah","PMID:31315658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone turnover during G0","synonyms":[{"name":"decreased histone exchange during G0 during cell quiescence","type":"exact"},{"name":"decreased histone exchange during G0 during quiescence","type":"exact"}],"termid":"FYPO:0007473"}


id: PBO:0061731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 4 pseudogene","termid":"PBO:0061731"}


id: GO:0003241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Developmental growth that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth involved in heart morphogenesis","termid":"GO:0003241"}


id: MONDO:0850105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune brainstem encephalitis with characteristic antibodies","secondary_identifiers":["Orphanet:624199","MEDGEN:1842903","GARD:22500","UMLS:C5680405"],"termid":"MONDO:0850105","xrefs":{"Monarch":{"xref_id":"0850105"}}}


id: PBO:0077438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 171","termid":"PBO:0077438"}


id: PBO:0057126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 210","termid":"PBO:0057126"}


id: PBO:0060087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 34","termid":"PBO:0060087"}


id: GO:0008955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H+.","definition_xrefs":["RHEA:23708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"peptidoglycan glycosyltransferase activity","secondary_identifiers":["EC:2.4.99.28","MetaCyc:RXN-14712"],"synonyms":[{"name":"PG-II activity","type":"related"},{"name":"bactoprenyldiphospho-N-acetylmuramoyl-(N-acetyl-D-glucosaminyl)-pentapeptide:peptidoglycan N-acetylmuramoyl-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"penicillin binding protein (3 or 1B) activity","type":"narrow"},{"name":"peptidoglycan TGase activity","type":"related"},{"name":"peptidoglycan transglycosylase activity","type":"related"},{"name":"undecaprenyldiphospho-N-acetyl-D-glucosaminyl-(1->4)-(N-acetyl-D-muramoylpentapeptide):undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide) disaccharidetransferase activity","type":"related"}],"termid":"GO:0008955"}


id: PBO:0029505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_tapered_cells_(obsolete_FYPO:0002210)","termid":"PBO:0029505"}


id: MONDO:0018008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic cardiomyopathy","termid":"MONDO:0005110"},{"relation_name":"is_a","term_name":"giant cell myocarditis","termid":"MONDO:0023232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"idiopathic giant cell myocarditis","secondary_identifiers":["Orphanet:329874","MEDGEN:82685","GARD:21494","UMLS:C0264856"],"synonyms":[{"name":"IGCM","type":"exact"}],"termid":"MONDO:0018008","xrefs":{"Monarch":{"xref_id":"0018008"}}}


id: PBO:0072049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 19","termid":"PBO:0072049"}


id: PR:O42652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartate aminotransferase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11879:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate aminotransferase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.13c","secondary_identifiers":["UniProtKB:O42652"],"synonyms":[{"name":"SPAC10F6.13c","type":"related"},{"name":"Spom972h-GOT1","type":"exact"},{"name":"transaminase A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42652"}


id: GO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glucarate, the D-enantiomer of glucarate. D-glucarate is derived from either D-glucose or L-gulose.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"glucarate metabolic process","termid":"GO:0019392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-glucarate metabolic process","synonyms":[{"name":"D-glucarate metabolism","type":"exact"},{"name":"saccharate metabolic process","type":"exact"},{"name":"saccharate metabolism","type":"exact"}],"termid":"GO:0042836"}


id: PBO:0068487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 70, pseudogene","termid":"PBO:0068487"}


id: MONDO:0024307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"prothrombin deficiency","secondary_identifiers":["UMLS:C4722227","MEDGEN:1651913"],"termid":"MONDO:0024307","xrefs":{"Monarch":{"xref_id":"0024307"}}}


id: PBO:0036107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell-cell_adhesion","termid":"PBO:0036107"}


id: PBO:0053822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1085","termid":"PBO:0053822"}


id: GO:1900834
data:
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id: PBO:0066450
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id: PBO:0063736
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id: MONDO:0018265
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id: MONDO:0017502
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id: PBO:0002551
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id: GO:0099613
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id: GO:0031465
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id: GO:0030448
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id: PBO:0074848
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id: GO:0102696
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id: SO:0002142
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id: MONDO:0032870
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id: MONDO:0003654
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id: PBO:0003651
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random septum position protein Rsp1","termid":"PBO:0003651"}


id: PATO:0001469
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id: MONDO:0004069
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id: FYPO:0002661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose 6-phosphate level","termid":"FYPO:0002660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose 6-phosphate level during heat shock","synonyms":[{"name":"decreased cellular trehalose 6-phosphate level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose 6-phosphate level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased cellular trehalose-6P level during heat shock","type":"exact"},{"name":"decreased trehalose 6-phosphate accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose 6-phosphate level during heat shock","type":"exact"}],"termid":"FYPO:0002661"}


id: PBO:0076340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 8","termid":"PBO:0076340"}


id: GO:2000434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein neddylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein neddylation","termid":"GO:0045116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein neddylation","synonyms":[{"name":"regulation of RUB1-protein conjugation","type":"exact"}],"termid":"GO:2000434"}


id: GO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Low molecular weight (10-45 kDa) proteins that associate with intermediate filaments by lateral binding of the filaments and have the effect of creating tight macrofilament aggregates.","definition_xrefs":["PMID:9484600","GOC:ajp"],"gene_count":0,"genotype_count":0,"name":"obsolete type I intermediate filament associated protein (obsolete GO:0001722)","synonyms":[{"name":"type I intermediate filament associated protein","type":"exact"}],"termid":"GO:0001722"}


id: PBO:0110326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOC antisense RNA 1","termid":"PBO:0110326"}


id: MONDO:0007377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type I granular corneal dystrophy (GCDI) is a rare form of stromal corneal dystrophy characterized by multiple small deposits in the superficial central corneal stroma, and progressive visual impairment, which may sometimes be severe.","definition_xrefs":["Orphanet:98962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"granular corneal dystrophy type I","secondary_identifiers":["MEDGEN:351521","OMIM:121900","GARD:9677","SCTID:419039007","UMLS:C1641846","MESH:C537304","DOID:0080530"],"synonyms":[{"name":"CDGG1","type":"related"},{"name":"GCD1","type":"exact"},{"name":"GCDI","type":"exact"},{"name":"Groenouw type I corneal dystrophy","type":"related"},{"name":"classic GCD","type":"exact"},{"name":"classic granular corneal dystrophy","type":"exact"},{"name":"corneal dystrophy Groenouw type I","type":"exact"},{"name":"corneal dystrophy granular type","type":"related"},{"name":"corneal dystrophy punctate or nodular","type":"related"},{"name":"corneal dystrophy, Groenouw type 1","type":"related"},{"name":"corneal dystrophy, Groenouw type I","type":"related"},{"name":"corneal dystrophy, punctate or nodular","type":"related"},{"name":"granular corneal dystrophy type 1","type":"exact"},{"name":"granular corneal dystrophy, type 1","type":"related"}],"termid":"MONDO:0007377","xrefs":{"Monarch":{"xref_id":"0007377"}}}


id: GO:0006965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:mah","PMID:10973475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"},{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide biosynthetic process","termid":"GO:0006963"},{"relation_name":"positively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","synonyms":[{"name":"activation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"anti-Gram-positive bacterial peptide induction","type":"exact"},{"name":"anti-Gram-positive bacterial polypeptide induction","type":"exact"},{"name":"stimulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"up regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"up-regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"upregulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"}],"termid":"GO:0006965"}


id: PBO:0036114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0036114"}


id: GO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + amino acid(out/in) = ADP + phosphate + amino acid(in/out).","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type amino acid transporter activity","secondary_identifiers":["GO:0032518","GO:0032520"],"synonyms":[{"name":"ATP-dependent amino acid transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled amino acid transmembrane transporter activity","type":"related"},{"name":"amino acid ABC transporter","type":"narrow"},{"name":"amino acid-exporting ATPase activity","type":"related"},{"name":"amino acid-importing ATPase activity","type":"related"},{"name":"amino acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015424"}


id: PBO:0080603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 37","termid":"PBO:0080603"}


id: GO:0007138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of meiosis II.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"},{"relation_name":"part_of","term_name":"anaphase","termid":"GO:0051322"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051327"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051327"],"is_obsolete":false,"name":"meiotic anaphase II","termid":"GO:0007138"}


id: PATO:0000949
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being abnormally flattened or coalesced.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciated","termid":"PATO:0000949"}


id: PBO:0018005
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CDC2","termid":"PBO:0018005"}


id: MONDO:0015471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare epilepsy typically characterized by isolated focal motor and somatosensory seizures. Less frequently other focal seizure types, with or without secondary generalization, have been described. The seizures usually happen when the patient is awake and take a benign course. The condition is transitory, interictal examinations are normal, and there is usually no family history of epilepsy.","definition_xrefs":["Orphanet:1544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign focal seizures of adolescence","secondary_identifiers":["UMLS:C4275141","SCTID:715425000","MEDGEN:896830","GARD:18728","icd11.foundation:1800285392"],"synonyms":[{"name":"adolescent benign focal crisis","type":"exact"}],"termid":"MONDO:0015471","xrefs":{"Monarch":{"xref_id":"0015471"}}}


id: PBO:0045369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 2","termid":"PBO:0045369"}


id: PBO:0071493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 34","termid":"PBO:0071493"}


id: PBO:0080080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 42","termid":"PBO:0080080"}


id: MONDO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal disorder","secondary_identifiers":["ICD9:569.49","SCTID:5964004","EFO:0009685","UMLS:C0034882","MEDGEN:19701","DOID:1285","MESH:D012002"],"synonyms":[{"name":"disease of rectum","type":"exact"},{"name":"disease or disorder of rectum","type":"exact"},{"name":"disorder of rectum","type":"exact"},{"name":"rectal disorder","type":"exact"},{"name":"rectum disease","type":"exact"},{"name":"rectum disease or disorder","type":"exact"}],"termid":"MONDO:0001593","xrefs":{"Monarch":{"xref_id":"0001593"}}}


id: GO:0009131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine nucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine nucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009131"}


id: GO:0031756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-3 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Edg-3 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-3 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031756"}


id: MONDO:1011947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle contracture and chondrodysplasia, non-human animal","secondary_identifiers":["OMIA:000675"],"termid":"MONDO:1011947","xrefs":{"Monarch":{"xref_id":"1011947"}}}


id: MONDO:0021353
data:
  {"annotated_genes":["SJAG_01156","SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87622,85408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"tumor of uterus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0003859","ICD9:239.5","MEDGEN:12030","NCIT:C3435","ONCOTREE:UTERUS","SCTID:126908007","UMLS:C0042138"],"synonyms":[{"name":"neoplasm of the uterus","type":"exact"},{"name":"neoplasm of uterus","type":"exact"},{"name":"tumor of the uterus","type":"exact"},{"name":"tumor of uterus","type":"exact"},{"name":"tumour of the uterus","type":"exact"},{"name":"uterine neoplasm","type":"exact"},{"name":"uterine neoplasms","type":"exact"},{"name":"uterine tumor","type":"exact"},{"name":"uterine tumour","type":"exact"},{"name":"uterus neoplasm","type":"exact"},{"name":"uterus neoplasm (disease)","type":"exact"},{"name":"uterus tumor","type":"exact"},{"name":"uterus tumour","type":"exact"}],"termid":"MONDO:0021353","terms_by_termid":{"MONDO:0011962":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0021353"}}}


id: GO:2000354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovarian follicle development","synonyms":[{"name":"regulation of follicular phase","type":"related"}],"termid":"GO:2000354"}


id: PBO:0060033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 21","termid":"PBO:0060033"}


id: GO:0033543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to trans-2-enoyl-CoA by 2,4-dienoyl-CoA reductase and delta3-delta2-enoyl-CoA isomerase; trans-2-enoyl-CoA returns to the core beta-oxidation pathway for further degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, reductase/isomerase pathway","termid":"GO:0033543"}


id: GO:0014074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a purine-containing compound stimulus.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to purine-containing compound","synonyms":[{"name":"response to purine","type":"related"}],"termid":"GO:0014074"}


id: PBO:0050410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPD divergent transcript","termid":"PBO:0050410"}


id: PBO:0059280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L38","termid":"PBO:0059280"}


id: PR:O74832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet127 gene.","definition_xrefs":["UniProtKB:O74832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA degradation protein pet127, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.04c","synonyms":[{"name":"Spom972h-pet127","type":"exact"}],"termid":"PR:O74832"}


id: GO:0102590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-rutinoside + 1-O-4-hydroxybenzoyl-beta-D-glucose = delphinidin 3-O-rutinoside-7-O-glucoside + 4-hydroxybenzoic acid + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-rutinoside 7-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102590)","termid":"GO:0102590"}


id: PBO:0113344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 20S pre-rRNA processing; involved in processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; relative distribution to the nucleus increases upon DNA replication stress; also detected in peroxisomes","termid":"PBO:0113344"}


id: PBO:0080763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 2","termid":"PBO:0080763"}


id: PBO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 2","termid":"PBO:0043543"}


id: PBO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane protein involved in karyogamy Tht1","termid":"PBO:0000354"}


id: MONDO:1011225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, dog","secondary_identifiers":["OMIA:000337-9615"],"termid":"MONDO:1011225","xrefs":{"Monarch":{"xref_id":"1011225"}}}


id: PBO:0072875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salvador family WW domain containing protein 1","termid":"PBO:0072875"}


id: PBO:0043912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 2","termid":"PBO:0043912"}


id: PBO:0076107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 12","termid":"PBO:0076107"}


id: MONDO:0008757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of alopecia areata, an inflammatory disease of the hair follicle, which is characterized by a complete loss of hair of the scalp and all the hair-bearing areas of the body.","definition_xrefs":["Orphanet:701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia universalis congenita","secondary_identifiers":["SCTID:86166000","DOID:0050634","MedDRA:10001767","GARD:614","MEDGEN:349262","OMIM:203655","MESH:C537055","ICD9:704.09","UMLS:C1859877"],"synonyms":[{"name":"ALUNC","type":"related"},{"name":"AU","type":"related"},{"name":"alopecia areata universalis","type":"related"},{"name":"alopecia universalis","type":"related"},{"name":"alopecia universalis congenita","type":"exact"},{"name":"atrichia, generalised","type":"exact"},{"name":"atrichia, generalized","type":"exact"}],"termid":"MONDO:0008757","xrefs":{"Monarch":{"xref_id":"0008757"}}}


id: GO:0006470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphoric residues from a protein.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dephosphorylation","synonyms":[{"name":"protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0006470"}


id: MONDO:0016779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by polyhydramnios (mostly due to placentomegaly), fetal macrosomia, abdominal wall defects, skeletal abnormalities (including bell-shaped thorax, coat-hanger appearance of the ribs and decreased mid to wide thorax diameter ratio in infancy), feeding difficulties and impaired swallowing, dysmorphic features (hairy forehead, full cheeks, protruding philtrum, micrognathia), developmental delay and intellectual disability. Additional features may include kyphoskoliosis, joint contractures, diastasis recti, muscular hypotonia. There is increased risk of hepatoblastoma.","definition_xrefs":["Orphanet:254519"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 imprinting defect","termid":"MONDO:0100499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies due to 14q32.2 maternally expressed gene defect","secondary_identifiers":["MEDGEN:1830421","GARD:17219","UMLS:C5779872","DOID:0111712"],"synonyms":[{"name":"Kagami-Ogata syndrome","type":"exact"},{"name":"MCA due to 14q32.2 maternally expressed gene defect","type":"exact"}],"termid":"MONDO:0016779","xrefs":{"Monarch":{"xref_id":"0016779"}}}


id: GO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-7 activity (obsolete GO:0004210)","synonyms":[{"name":"caspase-7 activity","type":"exact"}],"termid":"GO:0004210"}


id: PBO:0062874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase with linear linkage specificity","termid":"PBO:0062874"}


id: GO:0006219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyuridine metabolic process","termid":"GO:0046096"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyuridine catabolic process","synonyms":[{"name":"deoxyuridine breakdown","type":"exact"},{"name":"deoxyuridine catabolism","type":"exact"},{"name":"deoxyuridine degradation","type":"exact"}],"termid":"GO:0006219"}


id: PBO:0065160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated non-coding RNA 1","termid":"PBO:0065160"}


id: PBO:0076069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling receptor and transporter of retinol STRA6","termid":"PBO:0076069"}


id: PBO:0077436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 170A","termid":"PBO:0077436"}


id: PBO:0053536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 538","termid":"PBO:0053536"}


id: SO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence containing one or more repeat units.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"repeat_unit","termid":"SO:0000726"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_region","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"repeat region","type":"exact"}],"termid":"SO:0000657"}


id: PBO:0030009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell","termid":"PBO:0030009"}


id: PBO:0005684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set7 (predicted)","termid":"PBO:0005684"}


id: MONDO:0043355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of gastritis characterized by gastric subepithelial collagen deposition and inflammatory infiltrates in the lamina propria. The pathogenesis of this disorder is unclear although an association with autoimmune disorders has been reported. It affects both children and adults. Children present with iron deficiency anemia and have a nodular stomach on gastroscopy. adults present with chronic watery diarrhea and may have an associated collagenous colitis.","definition_xrefs":["NCIT:C122082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"collagenous gastritis","secondary_identifiers":["SCTID:711499009","MEDGEN:872908","UMLS:C4040043"],"synonyms":[{"name":"collagenous gastritis","type":"exact"}],"termid":"MONDO:0043355","xrefs":{"Monarch":{"xref_id":"0043355"}}}


id: MONDO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a bile duct.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver carcinoma in situ","termid":"MONDO:0004715"},{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"bile duct carcinoma in situ","secondary_identifiers":["DOID:0050613","NCIT:C134609"],"synonyms":[{"name":"bile duct in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of bile duct","type":"exact"},{"name":"stage 0 bile duct carcinoma","type":"exact"}],"termid":"MONDO:0000374","xrefs":{"Monarch":{"xref_id":"0000374"}}}


id: MONDO:0004036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0004036 (obsolete MONDO:0004036)","termid":"MONDO:0004036","xrefs":{"Monarch":{"xref_id":"0004036"}}}


id: PBO:0069498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 765, pseudogene","termid":"PBO:0069498"}


id: GO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a microvillus of a rhabdomere.","definition_xrefs":["PMID:14744998","GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus membrane","termid":"GO:0031528"},{"relation_name":"part_of","term_name":"rhabdomere membrane","termid":"GO:0033583"},{"relation_name":"part_of","term_name":"rhabdomere microvillus","termid":"GO:0035996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"rhabdomere microvillus membrane","termid":"GO:0035997"}


id: PBO:0027573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027573"}


id: PBO:0079421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 4","termid":"PBO:0079421"}


id: PBO:0086887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of mannitol and sorbitol with moderate affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; induced by non-fermentable carbon sources; induced in low glucose, repressed in high glucose; HXT13 has a paralog, HXT17, that arose from a segmental duplication","termid":"PBO:0086887"}


id: MONDO:0002320
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id: FYPO:0009111
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  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[120030],"is_not":false,"summary":null,"term":"FYPO:0009111"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype that reflects increased occurrence of flocculation. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"increased flocculation during vegetative growth","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"termid":"FYPO:0009111","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null,"FYPO:0009111":null}}


id: GO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071180"}


id: SO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACAGTG), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_heptamer","synonyms":[{"name":"V heptamer","type":"exact"},{"name":"V-HEPTAMER","type":"exact"}],"termid":"SO:0000533"}


id: MONDO:0016882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 20","secondary_identifiers":["GARD:20805","MEDGEN:1825964","UMLS:C5679662","Orphanet:261846"],"synonyms":[{"name":"partial deletion of chromosome type 20","type":"exact"},{"name":"partial monosomy of chromosome 20","type":"exact"}],"termid":"MONDO:0016882","xrefs":{"Monarch":{"xref_id":"0016882"}}}


id: PBO:0057753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1912","termid":"PBO:0057753"}


id: GO:1904302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["PMID:1849751","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of maternal process involved in parturition","synonyms":[{"name":"down regulation of maternal process involved in parturition","type":"exact"},{"name":"down-regulation of maternal process involved in parturition","type":"exact"},{"name":"downregulation of maternal process involved in parturition","type":"exact"},{"name":"inhibition of maternal process involved in parturition","type":"narrow"}],"termid":"GO:1904302"}


id: PBO:0038950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated pyruvate carboxylase interacting lncRNA","termid":"PBO:0038950"}


id: PBO:0090325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol 14-demethylase (cytochrome P450) Erg11","termid":"PBO:0090325"}


id: PBO:0088236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane voltage-dependent anion-selective channel Por1","termid":"PBO:0088236"}


id: GO:1901570
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fatty acid derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid derivative biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative anabolism","type":"exact"},{"name":"fatty acid derivative biosynthesis","type":"exact"},{"name":"fatty acid derivative formation","type":"exact"},{"name":"fatty acid derivative synthesis","type":"exact"}],"termid":"GO:1901570","terms_by_termid":{"GO:0035338":null}}


id: PBO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2C","termid":"PBO:0044869"}


id: GO:0018661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + orcinol = 2,3,5-trihydroxytoluene + H2O + NAD+.","definition_xrefs":["EC:1.14.13.6","RHEA:19601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"orcinol 2-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0092","KEGG_REACTION:R02830","MetaCyc:ORCINOL-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"orcinol hydroxylase activity","type":"exact"},{"name":"orcinol,NADH:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0018661"}


id: MONDO:0016323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic respiratory distress with surfactant metabolism deficiency","secondary_identifiers":["Orphanet:217566","UMLS:C5190853","GARD:17127","MEDGEN:1679491"],"termid":"MONDO:0016323","xrefs":{"Monarch":{"xref_id":"0016323"}}}


id: GO:0051776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a chemical stimulus indicating redox state is received and converted into a molecular signal. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["PMID:16987039","GOC:mah","PMID:15131240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of redox state","synonyms":[{"name":"redox sensing","type":"exact"}],"termid":"GO:0051776"}


id: PBO:0087530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain","termid":"PBO:0087530"}


id: GO:0060083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body.","definition_xrefs":["GOC:dph","PMID:15827347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle contraction involved in micturition","synonyms":[{"name":"smooth muscle contraction involved in urination","type":"related"},{"name":"urinary bladder smooth muscle contraction involved in micturition","type":"related"}],"termid":"GO:0060083"}


id: GO:0010138
data:
  {"annotated_genes":["SJAG_00533","SJAG_04354","SJAG_03708","SJAG_04713","SJAG_04709"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93330,68266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[92329,93331,68265,87815,88803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The pathway by which pyrimidine bases or pyrimidine ribonucleosides from pyrimidine nucleotide breakdown are converted back to pyrimidine ribonucleotides. The salvage pathway is important where there is no de novo pyrimidine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide salvage","termid":"GO:0032262"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0010138","terms_by_termid":{"GO:0044206":null,"GO:0044211":null}}


id: GO:0048482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ovule are generated and organized. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"},{"relation_name":"part_of","term_name":"plant ovule development","termid":"GO:0048481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule morphogenesis","termid":"GO:0048482"}


id: GO:1904815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to chromosome, telomeric region.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF_telomere","PMID:19487455","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromosome, telomeric region","termid":"GO:1904814"},{"relation_name":"negatively_regulates","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to chromosome, telomeric region","synonyms":[{"name":"down regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"down regulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down regulation of protein localization to telomere","type":"exact"},{"name":"down-regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of protein localization to telomere","type":"exact"},{"name":"downregulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"downregulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"downregulation of protein localization to telomere","type":"exact"},{"name":"inhibition of protein localisation to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of protein localization to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of protein localization to telomere","type":"narrow"},{"name":"negative regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"negative regulation of protein localization to telomere","type":"exact"}],"termid":"GO:1904815"}


id: PBO:0046054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 2","termid":"PBO:0046054"}


id: MONDO:0007465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichiasis with congenital anomalies of the heart and peripheral vasculature","secondary_identifiers":["MESH:C565092","OMIM:126320","UMLS:C1852062","Orphanet:1683","MEDGEN:338862"],"synonyms":[{"name":"distichiasis with congenital anomalies of the heart and peripheral vasculature","type":"exact"},{"name":"distichiasis-congenital heart defects-peripheral vascular anomalies syndrome","type":"exact"}],"termid":"MONDO:0007465","xrefs":{"Monarch":{"xref_id":"0007465"}}}


id: MONDO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm arising from the fibrous tissue. It is characterized by the presence of spindle-shaped fibroblasts.","definition_xrefs":["NCIT:C3041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroma","secondary_identifiers":["MESH:D005350","UMLS:C0016045","DOID:0050871","SCTID:424568000","EFO:0002424","MEDGEN:42016","ICD9:215.9","ICDO:8810/0"],"synonyms":[{"name":"fibroma","type":"exact"},{"name":"fibroma, benign","type":"exact"}],"termid":"MONDO:0005167","xrefs":{"Monarch":{"xref_id":"0005167"}}}


id: GO:0021570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:curators","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 development","termid":"GO:0021570"}


id: MONDO:0032923
data:
  {"annotated_genes":["SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85858],"is_not":false,"summary":null,"term":"MONDO:0032923"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070409","OMIM:618800","UMLS:C5394101","MEDGEN:1712568"],"synonyms":[{"name":"SCAR28","type":"related"},{"name":"THG1L-related autosomal recessive congenital cerebellar ataxia","type":"exact"}],"termid":"MONDO:0032923","terms_by_termid":{"MONDO:0032923":null},"xrefs":{"Monarch":{"xref_id":"0032923"}}}


id: PBO:0088753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl-tRNA hydrolase Pth1","termid":"PBO:0088753"}


id: MOD:01487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532#K","OMSSA:168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ114K","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01487"}


id: GO:0008797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = fumarate + NH3.","definition_xrefs":["EC:4.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aspartate ammonia-lyase activity","secondary_identifiers":["MetaCyc:ASPARTASE-RXN","RHEA:16601"],"synonyms":[{"name":"L-aspartase activity","type":"related"},{"name":"L-aspartate ammonia-lyase (fumarate-forming)","type":"related"},{"name":"L-aspartate ammonia-lyase activity","type":"related"},{"name":"aspartase activity","type":"related"},{"name":"fumaric aminase activity","type":"related"}],"termid":"GO:0008797"}


id: GO:0021911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the synthesis and degradation of retionic acid that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"retinoic acid metabolic process in spinal cord anterior-posterior patterning","synonyms":[{"name":"retinoic acid metabolism in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021911"}


id: MONDO:0006853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of chondrosarcoma arising from bone and soft tissue. It is characterized by the presence of malignant small round cells, biphasic growth pattern, and well differentiated hyaline cartilage. Clinical presentation includes pain and swelling. The clinical course is aggressive, with local recurrences and distant metastases.","definition_xrefs":["NCIT:C3737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"},{"relation_name":"is_a","term_name":"chondrosarcoma","termid":"MONDO:0008977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mesenchymal chondrosarcoma","secondary_identifiers":["ONCOTREE:MCHS","EFO:1001041","MEDGEN:104904","DOID:4545","MESH:D018211","ICDO:9240/3","UMLS:C0206637","MedDRA:10027389"],"synonyms":[{"name":"mesenchymal chondrosarcoma","type":"exact"}],"termid":"MONDO:0006853","xrefs":{"Monarch":{"xref_id":"0006853"}}}


id: GO:2000388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antral ovarian follicle growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"},{"relation_name":"positively_regulates","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antral ovarian follicle growth","termid":"GO:2000388"}


id: MONDO:0010194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Weill-Marchesani syndrome in which the cause of the disease is a mutation in the ADAMTS10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani syndrome 1","secondary_identifiers":["GARD:15246","MEDGEN:1637058","UMLS:C4552002","OMIM:277600"],"synonyms":[{"name":"ADAMTS10 Weill-Marchesani syndrome","type":"exact"},{"name":"WMS1","type":"related"},{"name":"Weill-Marchesani syndrome 1","type":"exact"},{"name":"Weill-Marchesani syndrome 1, recessive","type":"exact"},{"name":"Weill-Marchesani syndrome caused by mutation in ADAMTS10","type":"exact"},{"name":"Weill-Marchesani syndrome type 1","type":"exact"},{"name":"Weill-Marchesani syndrome, autosomal recessive","type":"related"},{"name":"mesodermal Dysmorphodystrophy, congenital","type":"related"},{"name":"spherophakia-brachymorphia syndrome","type":"related"}],"termid":"MONDO:0010194","xrefs":{"Monarch":{"xref_id":"0010194"}}}


id: MONDO:0015509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Genetic biliary tract disease.","gene_count":0,"genotype_count":0,"name":"obsolete hereditary biliary tract disease (obsolete MONDO:0015509)","secondary_identifiers":["Orphanet:156607"],"synonyms":[{"name":"genetic biliary tract disease","type":"exact"}],"termid":"MONDO:0015509","xrefs":{"Monarch":{"xref_id":"0015509"}}}


id: MONDO:0012500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chilblain lupus in which the cause of the disease is a mutation in the TREX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial chilblain lupus","termid":"MONDO:0018827"},{"relation_name":"is_a","term_name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"chilblain lupus 1","secondary_identifiers":["UMLS:C0024145","GARD:18493","OMIM:610448","MEDGEN:9822"],"synonyms":[{"name":"CHBL1","type":"related"},{"name":"TREX1 chilblain lupus","type":"exact"},{"name":"chilblain lupus","type":"broad"},{"name":"chilblain lupus 1","type":"exact"},{"name":"chilblain lupus caused by mutation in TREX1","type":"exact"},{"name":"chilblain lupus type 1","type":"exact"}],"termid":"MONDO:0012500","xrefs":{"Monarch":{"xref_id":"0012500"}}}


id: FYPO:0004441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"},{"relation_name":"is_a","term_name":"decreased level of substance in cytosol","termid":"FYPO:0001605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cytosolic calcium level","synonyms":[{"name":"decreased cytosolic calcium ion level","type":"exact"},{"name":"decreased cytosolic calcium ion level during vegetative growth","type":"exact"},{"name":"decreased cytosolic calcium level during mitotic cell cycle","type":"related"},{"name":"decreased level of calcium ions in cytosol","type":"exact"},{"name":"decreased levels of free cytosolic calcium","type":"exact"},{"name":"reduced cytosolic calcium level","type":"exact"}],"termid":"FYPO:0004441"}


id: PBO:0029690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxygen_consumption_during_vegetative_growth","termid":"PBO:0029690"}


id: PBO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Pro (TGG) 1-1","termid":"PBO:0061169"}


id: PBO:0005795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphatase (predicted)","termid":"PBO:0005795"}


id: PBO:0028848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_stability_during_cellular_response_to_UV","termid":"PBO:0028848"}


id: GO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-10 production","termid":"GO:0032653"},{"relation_name":"positively_regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-10 production","secondary_identifiers":["GO:2001181","GO:0045082"],"synonyms":[{"name":"activation of interleukin-10 production","type":"narrow"},{"name":"positive regulation of IL-10 production","type":"exact"},{"name":"positive regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-10 secretion","type":"narrow"},{"name":"stimulation of interleukin-10 production","type":"narrow"},{"name":"up regulation of interleukin-10 production","type":"exact"},{"name":"up-regulation of interleukin-10 production","type":"exact"},{"name":"upregulation of interleukin-10 production","type":"exact"}],"termid":"GO:0032733"}


id: FYPO:0004320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered DNA level","synonyms":[{"name":"abnormal DNA content","type":"exact"},{"name":"abnormal DNA level","type":"exact"},{"name":"altered DNA content","type":"exact"},{"name":"altered cellular DNA level","type":"exact"}],"termid":"FYPO:0004320"}


id: GO:2000527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"}


id: PBO:0085442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates a number of phosphatidylinositol phosphates (PtdInsPs, PIPs) to PI; involved in endocytosis; hyperosmotic stress causes translocation to actin patches; synaptojanin-like protein with a Sac1 domain; INP52 has a paralog, INP53, that arose from the whole genome duplication","termid":"PBO:0085442"}


id: MONDO:0030669
data:
  {"annotated_genes":["SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87617],"is_not":false,"summary":null,"term":"MONDO:0030669"}]},"cv_name":"mondo","definition":"A severe autosomal recessive developmental disorder characterized by multiple intestinal atresia apparent soon after birth. Affected infants have a distended abdomen and do not pass meconium. There is some evidence of inflammatory bowel disease. Death occurs in the first weeks of life. Some patients may also have immunodeficiency.","definition_xrefs":["OMIM:619708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PI4KA-related disorder","termid":"MONDO:1040012"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005559"],"is_obsolete":false,"name":"gastrointestinal defects and immunodeficiency syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1811526","UMLS:C5676901"],"synonyms":[{"name":"GIDID2","type":"exact"},{"name":"gastrointestinal defects and immunodeficiency syndrome 2","type":"exact"},{"name":"multiple intestinal atresia with or without leukopenia","type":"exact"}],"termid":"MONDO:0030669","terms_by_termid":{"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"0030669"}}}


id: PBO:0063615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6","termid":"PBO:0063615"}


id: MONDO:0011871
data:
  {"annotated_genes":["SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86563],"is_not":false,"summary":null,"term":"MONDO:0011871"}]},"cv_name":"mondo","definition":"Niemann-Pick disease type B is a mild subtype of Niemann-Pick disease, an autosomal recessive lysosomal disease, and is characterized clinically by onset in childhood with hepatosplenomegaly, growth retardation, and lung disorders such as infections and dyspnea","definition_xrefs":["Orphanet:77293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"acid sphingomyelinase deficiency","termid":"MONDO:0100464"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0006025","MONDO:0005046","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"Niemann-Pick disease type B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070112","icd11.foundation:327269975","MEDGEN:78651","GARD:10729","ICD10CM:E75.241","NANDO:1200062","SCTID:39390005","NANDO:2201207","NCIT:C126866","OMIM:607616","UMLS:C0268243","MESH:D052537"],"synonyms":[{"name":"Niemann Pick disease type B","type":"related"},{"name":"Niemann-PICK disease, type B","type":"related"},{"name":"Niemann-Pick disease, Intermediate, with visceral involvement and rapid progression","type":"related"},{"name":"Niemann-Pick disease, type E","type":"related"},{"name":"Niemann-Pick disease, type F","type":"related"},{"name":"type B Niemann-Pick disease","type":"exact"}],"termid":"MONDO:0011871","terms_by_termid":{"MONDO:0011871":null},"xrefs":{"Monarch":{"xref_id":"0011871"}}}


id: PBO:0045904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 2","termid":"PBO:0045904"}


id: MONDO:0021244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the submandibular gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"submandibular gland disorder","termid":"MONDO:0001597"},{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submandibular gland neoplasm","secondary_identifiers":["MEDGEN:20986","NCIT:C3393","SCTID:254464000","EFO:1001853","MESH:D013365","UMLS:C0038558"],"synonyms":[{"name":"neoplasm of submandibular gland","type":"exact"},{"name":"neoplasm of the submandibular gland","type":"exact"},{"name":"submandibular gland neoplasm (disease)","type":"exact"},{"name":"submandibular gland tumor","type":"exact"},{"name":"submandibular gland tumour","type":"exact"},{"name":"tumor of submandibular gland","type":"exact"},{"name":"tumor of the submandibular gland","type":"exact"},{"name":"tumour of submandibular gland","type":"exact"},{"name":"tumour of the submandibular gland","type":"exact"}],"termid":"MONDO:0021244","xrefs":{"Monarch":{"xref_id":"0021244"}}}


id: PBO:0082056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease","termid":"PBO:0082056"}


id: PBO:0086499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane phosphatase; involved in the general stress response and inactivating dephosphorylation of Mep2p; required along with Psr1p and binding partner Whi2p for full activation of STRE-mediated gene expression, possibly through Msn2p dephosphorylation, and for inhibition of TORC1 in response to limiting amino acids; regulates the sodium ion stress response with Psr1p; member of the HAD family of protein phosphatases","termid":"PBO:0086499"}


id: PBO:0063755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 20","termid":"PBO:0063755"}


id: GO:0015199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of betaine from one side of a membrane to the other. Betaine is the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amino-acid betaine transmembrane transporter activity","synonyms":[{"name":"betaine transmembrane transporter activity","type":"exact"},{"name":"betaine/GABA:sodium symporter activity","type":"narrow"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"}],"termid":"GO:0015199"}


id: GO:0042004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of female sex and sexual phenotypes in the hermaphroditic soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feminization of hermaphrodite soma","termid":"GO:0042004"}


id: MONDO:0018272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A small cell carcinoma that involves the ovary.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete small cell carcinoma of the ovary (obsolete MONDO:0018272)","termid":"MONDO:0018272","xrefs":{"Monarch":{"xref_id":"0018272"}}}


id: PR:O94321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multistep phosphorelay regulator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.02","synonyms":[{"name":"Spom972h-mpr1","type":"exact"}],"termid":"PR:O94321"}


id: MONDO:0010672
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86319,86320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"}]},"cv_name":"mondo","definition":"A genetic condition that affects the eyes and skin. It is mainly found in females and is characterized by small or poorly developed eyes (microphthalmia) and characteristic linear skin markings on the head and neck. The signs and symptoms of this condition may include abnormalities of the brain, heart, and genitourinary system. Other symptoms may include short stature, developmental delay, and finger and toenails that do not grow normally (nail dystrophy). MLS syndrome is typically caused by either a deletion of certain genetic material on the p (short) arm of the X chromosome or by a mutation in the HCCS gene. In some cases, it may be caused by mutations in the COX7B and NDUFB11 genes, (also located on the X chromosome). According to the mutated gene, the disease may be classified in three subtypes. This condition is inherited in an X-linked manner and is thought to result in serious early developmental concerns in males, leading to almost no males with this condition surviving to delivery.Although there is no specific treatment or cure for MLS syndrome, there may be ways to manage the symptoms. A team of doctors is often needed to figure out the treatment options based on each person's symptoms.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"mixed dermis disorder","termid":"MONDO:0019294"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"linear skin defects with multiple congenital anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537466","GARD:3659","DOID:0111875","OMIMPS:309801","Orphanet:2556","SCTID:721879006"],"synonyms":[{"name":"LSDMCA1","type":"related"},{"name":"MCOPS7","type":"exact"},{"name":"MIDAS syndrome","type":"exact"},{"name":"MLS syndrome","type":"exact"},{"name":"Micropthalmia syndromic 7","type":"related"},{"name":"linear skin defects with multiple congenital anomalies","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies 1","type":"related"},{"name":"linear skin defects with multiple congenital anomalies type 1","type":"exact"},{"name":"microphthalmia dermal aplasia and sclerocornea syndrome","type":"related"},{"name":"microphthalmia with linear skin defects syndrome","type":"exact"},{"name":"microphthalmia-dermal aplasia-sclerocornea syndrome","type":"exact"},{"name":"syndromic microphthalmia type 7","type":"exact"}],"termid":"MONDO:0010672","terms_by_termid":{"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0010672"}}}


id: PR:O14164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.16c","secondary_identifiers":["UniProtKB:O14164"],"synonyms":[{"name":"SPAC1E11.01c","type":"related"},{"name":"Spom972h-Eif3c","type":"exact"},{"name":"eIF3 p93 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eif3c","type":"related"},{"name":"eukaryotic translation initiation factor 3 93 kDa subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tif33","type":"related"},{"name":"translation initiation factor eIF3, p93 subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14164"}


id: MONDO:0021239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra neoplasm","secondary_identifiers":["MEDGEN:12014","NCIT:C3428","UMLS:C0041971","EFO:0003846"],"synonyms":[{"name":"neoplasm of the urethra","type":"exact"},{"name":"neoplasm of urethra","type":"exact"},{"name":"neoplasms. urethra","type":"exact"},{"name":"tumor of the urethra","type":"exact"},{"name":"tumor of urethra","type":"exact"},{"name":"tumors. urethra","type":"exact"},{"name":"tumour of the urethra","type":"exact"},{"name":"tumour of urethra","type":"exact"},{"name":"urethra neoplasm (disease)","type":"exact"},{"name":"urethra neoplasms","type":"exact"},{"name":"urethra tumor","type":"exact"},{"name":"urethra tumors","type":"exact"},{"name":"urethra tumour","type":"exact"},{"name":"urethra tumours","type":"exact"},{"name":"urethral neoplasm","type":"exact"},{"name":"urethral neoplasms","type":"exact"},{"name":"urethral tumor","type":"exact"},{"name":"urethral tumors","type":"exact"},{"name":"urethral tumour","type":"exact"},{"name":"urethral tumours","type":"exact"}],"termid":"MONDO:0021239","xrefs":{"Monarch":{"xref_id":"0021239"}}}


id: MONDO:0021283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant teratoma that involves the mediastinum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"mediastinum teratoma","termid":"MONDO:0003518"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"mediastinal malignant germ cell tumor","termid":"MONDO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant teratoma of mediastinum","secondary_identifiers":["NCIT:C4668","SCTID:278042005","MEDGEN:91164","UMLS:C0349663"],"synonyms":[{"name":"immature malignant teratoma of mediastinum","type":"exact"},{"name":"immature malignant teratoma of the mediastinum","type":"exact"},{"name":"malignant mediastinal teratoma","type":"exact"},{"name":"malignant teratoma of the mediastinum","type":"exact"},{"name":"mediastinal immature malignant teratoma","type":"exact"},{"name":"mediastinum malignant teratoma","type":"exact"}],"termid":"MONDO:0021283","xrefs":{"Monarch":{"xref_id":"0021283"}}}


id: SO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A hexameric RNA motif consisting of nucleotides UNAAAC (where N can be any nucleotide) that targets the RNA for degradation.","definition_xrefs":["PMID:22645662","PomBase:al","PMID:28765164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_stability_element","termid":"SO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNAAAC_motif","synonyms":[{"name":"UNAAAC motif","type":"exact"}],"termid":"SO:0002207"}


id: SO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001051 nested_region (obsolete SO:0001051)","termid":"SO:0001051"}


id: PATO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001114 relative energy value (obsolete PATO:0001114)","termid":"PATO:0001114"}


id: GO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of TLR signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034122"}


id: PBO:0080260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 23 pseudogene","termid":"PBO:0080260"}


id: PBO:0110268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb3","termid":"PBO:0110268"}


id: PBO:0054642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2047","termid":"PBO:0054642"}


id: GO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete focal adhesion kinase activity (obsolete GO:0004717)","synonyms":[{"name":"FAK","type":"exact"},{"name":"focal adhesion kinase activity","type":"exact"}],"termid":"GO:0004717"}


id: GO:0016157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an NDP-alpha-D-glucose + D-fructose = a ribonucleoside 5'-diphosphate + H+ + sucrose. The phosphate acceptor can be UDP or ADP.","definition_xrefs":["RHEA:16241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"sucrose synthase activity","secondary_identifiers":["MetaCyc:SUCROSE-SYNTHASE-RXN","EC:2.4.1.13"],"synonyms":[{"name":"NDP-glucose:D-fructose 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-fructose glucosyltransferase activity","type":"related"},{"name":"UDPglucose-fructose glucosyltransferase activity","type":"related"},{"name":"sucrose synthetase activity","type":"related"},{"name":"sucrose-UDP glucosyltransferase activity","type":"related"},{"name":"sucrose-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-fructose glucosyltransferase activity","type":"related"}],"termid":"GO:0016157"}


id: PR:Q9P6N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine aspartase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10188:SF8","OMA:SCHPO01085","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.09c","secondary_identifiers":["UniProtKB:Q9P6N7"],"synonyms":[{"name":"Spom972h-TASP1","type":"exact"},{"name":"taspase-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N7"}


id: PBO:0089701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec62","termid":"PBO:0089701"}


id: MONDO:0007886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the body of the uterus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C3434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus leiomyoma","secondary_identifiers":["EFO:0000731","ICD9:218.9","UMLS:C0042133","NCIT:C7052","SCTID:95315005","MEDGEN:21801","ICD9:218","OMIM:150699","HP:0000131","MESH:D047708","DOID:13223","ONCOTREE:ULM"],"synonyms":[{"name":"UL","type":"related"},{"name":"body of uterus fibroid","type":"exact"},{"name":"body of uterus leiomyoma","type":"exact"},{"name":"corpus uteri fibroid","type":"exact"},{"name":"corpus uteri leiomyoma","type":"exact"},{"name":"fibroid of body of uterus","type":"exact"},{"name":"fibroid of corpus uteri","type":"exact"},{"name":"fibroid of the body of uterus","type":"exact"},{"name":"fibroid of the corpus uteri","type":"exact"},{"name":"fibroid of the uterine body","type":"exact"},{"name":"fibroid of the uterine corpus","type":"exact"},{"name":"fibroid of uterine body","type":"exact"},{"name":"fibroid of uterine corpus","type":"exact"},{"name":"leiomyoma of body of uterus","type":"exact"},{"name":"leiomyoma of corpus uteri","type":"exact"},{"name":"leiomyoma of the body of uterus","type":"exact"},{"name":"leiomyoma of the corpus uteri","type":"exact"},{"name":"leiomyoma of the uterine body","type":"exact"},{"name":"leiomyoma of the uterine corpus","type":"exact"},{"name":"leiomyoma of uterine body","type":"exact"},{"name":"leiomyoma of uterine corpus","type":"exact"},{"name":"leiomyoma, uterine","type":"related"},{"name":"plexiform leiomyoma","type":"exact"},{"name":"uterine body fibroid","type":"exact"},{"name":"uterine body leiomyoma","type":"exact"},{"name":"uterine corpus fibroid","type":"exact"},{"name":"uterine corpus leiomyoma","type":"exact"},{"name":"uterine corpus leiomyomata","type":"exact"},{"name":"uterine fibroid","type":"exact"},{"name":"uterine leiomyoma","type":"related"},{"name":"uterus fibroma","type":"related"}],"termid":"MONDO:0007886","xrefs":{"Monarch":{"xref_id":"0007886"}}}


id: PBO:0113515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB protein kinase-like family member; mitochondrial inner membrane protein that interacts with outer membrane proteins Por1p and Om14p to form a MICOS-independent mitochondrial contact site; role in mitochondrial organization; contributes to mitochondrial lipid homeostasis; controls the cellular distribution of coenzyme Q (CoQ); contains a potential mitochondrial targeting sequence and predicted transmembrane domain","termid":"PBO:0113515"}


id: MONDO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus haemophilus.","definition_xrefs":["MESH:D006192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haemophilus infectious disease","secondary_identifiers":["SCTID:41659003","NCIT:C34654","EFO:1001127"],"synonyms":[{"name":"Haemophilus caused disease or disorder","type":"exact"},{"name":"Haemophilus disease or disorder","type":"exact"},{"name":"Haemophilus infection","type":"related"},{"name":"Haemophilus infectious disease","type":"exact"},{"name":"Hemophilus infection","type":"related"},{"name":"Hemophilus infections","type":"related"},{"name":"haemophilus infectious disease","type":"exact"},{"name":"infection, Haemophilus","type":"related"},{"name":"infection, Hemophilus","type":"related"},{"name":"infections, Haemophilus","type":"related"},{"name":"infections, Hemophilus","type":"related"}],"termid":"MONDO:0006926","xrefs":{"Monarch":{"xref_id":"0006926"}}}


id: PBO:0088224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase (mitofusin) Fzo1","termid":"PBO:0088224"}


id: GO:0090516
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104199],"is_not":false,"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine transport","termid":"GO:0015825"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-serine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090516","terms_by_termid":{"GO:0090516":null}}


id: PBO:0060180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 1, cell surface associated","termid":"PBO:0060180"}


id: GO:0004549
data:
  {"annotated_genes":["SJAG_04907","SJAG_04885","SJAG_00306","SJAG_04916","SJAG_00754","SJAG_06613","SJAG_02553","SJAG_04582","SJAG_01623","SJAG_00955","SJAG_03328","SJAG_03234","SJAG_01260","SJAG_00997","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70523,80708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[71625,104928,68764,115703,102420,97146,60658,63800,95074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[79341,73299,71724,118072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in tRNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_00997":null,"SJAG_01260":null,"SJAG_01623":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04885":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696813","Reactome:R-HSA-6785722","Reactome:R-HSA-5696815","Reactome:R-HSA-6786854"],"synonyms":[{"name":"tRNA-specific RNase activity","type":"exact"}],"termid":"GO:0004549","terms_by_termid":{"GO:0000213":null,"GO:0004526":null,"GO:0042781":null}}


id: GO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell papilla that is part of a stigma papilla cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant cell papilla","termid":"GO:0090395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stigma papilla","termid":"GO:0090397"}


id: PBO:0046537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 18 member 1","termid":"PBO:0046537"}


id: PBO:0081211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 1","termid":"PBO:0081211"}


id: PBO:0054954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2368","termid":"PBO:0054954"}


id: PBO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex negative regulatory component Yox1","termid":"PBO:0003704"}


id: PBO:0051919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3","termid":"PBO:0051919"}


id: MONDO:0006620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid lesion that arises from the vulva and is characterized by the presence of fibrovascular stroma lined by squamous epithelium. There is no evidence of epithelial atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin tag","termid":"MONDO:0004026"},{"relation_name":"is_a","term_name":"polyp of vulva","termid":"MONDO:0021396"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulva fibroepithelial polyp","secondary_identifiers":["UMLS:C1336978","DOID:8255","MEDGEN:237054","NCIT:C6857"],"synonyms":[{"name":"fibroepithelial polyp of the vulva","type":"exact"},{"name":"fibroepithelial polyp of vulva","type":"exact"},{"name":"mammalian vulva skin tag","type":"exact"},{"name":"skin tag of mammalian vulva","type":"exact"},{"name":"vulval fibroepithelial polyp","type":"exact"},{"name":"vulvar fibroepithelial polyp","type":"exact"},{"name":"vulvar fibroepithelial stromal polyp","type":"exact"}],"termid":"MONDO:0006620","xrefs":{"Monarch":{"xref_id":"0006620"}}}


id: MONDO:0010134
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86051,86052],"is_not":false,"summary":null,"term":"MONDO:0010134"}]},"cv_name":"mondo","definition":"Pendred syndrome (PDS) is a clinically variable genetic disorder characterized by bilateral sensorineural hearing loss and euthyroid goiter.","definition_xrefs":["Orphanet:705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Pendred syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:274600","MEDGEN:82890","UMLS:C0271829","icd11.foundation:1156056623","MESH:C536648","SCTID:70348004","DOID:0060744","GARD:4271","NCIT:C121745"],"synonyms":[{"name":"PDS","type":"related"},{"name":"Pendred syndrome","type":"exact"},{"name":"TDH2B","type":"exact"},{"name":"autosomal recessive sensorineural hearing impairment and goiter","type":"related"},{"name":"autosomal recessive sensorineural hearing impairment and goitre","type":"related"},{"name":"congenital hypothyroidism due to dyshormonogenesis 2B","type":"exact"},{"name":"deafness with goiter","type":"exact"},{"name":"deafness with goitre","type":"exact"},{"name":"genetic defect in thyroid hormonogenesis 2B","type":"exact"},{"name":"goiter-deafness syndrome","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 2B","type":"exact"},{"name":"thyroid dyshormonogenesis 2B","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 2B","type":"exact"}],"termid":"MONDO:0010134","terms_by_termid":{"MONDO:0010134":null},"xrefs":{"Monarch":{"xref_id":"0010134"}}}


id: PBO:0090686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex CAF1 family ribonuclease subunit 7/8","termid":"PBO:0090686"}


id: GO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of exocyst assembly.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocyst assembly","termid":"GO:0001928"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"positively_regulates","term_name":"exocyst assembly","termid":"GO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0140056"],"is_obsolete":false,"name":"positive regulation of exocyst assembly","synonyms":[{"name":"activation of exocyst assembly","type":"narrow"},{"name":"stimulation of exocyst assembly","type":"narrow"},{"name":"up regulation of exocyst assembly","type":"exact"},{"name":"up-regulation of exocyst assembly","type":"exact"},{"name":"upregulation of exocyst assembly","type":"exact"}],"termid":"GO:0001930"}


id: GO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structure or activity","termid":"GO:0050803"}


id: PBO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 21","termid":"PBO:0072302"}


id: PBO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in ribosomal large subunit biogenesis (predicted)","termid":"PBO:0012038"}


id: PBO:0030773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hydroxyurea","termid":"PBO:0030773"}


id: PBO:0003573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Sol1","termid":"PBO:0003573"}


id: MOD:01342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00530. Remap to MOD:00530.","definition_xrefs":["PubMed:12148805","Unimod:162"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01342 selenium substitution for sulfur - site M (obsolete MOD:01342)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01342"}


id: MONDO:0017800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudo-Meigs syndrome","secondary_identifiers":["MEDGEN:1678402","GARD:21373","UMLS:C5190824","Orphanet:314459"],"synonyms":[{"name":"pseudo-Demons-Meigs syndrome","type":"exact"}],"termid":"MONDO:0017800","xrefs":{"Monarch":{"xref_id":"0017800"}}}


id: GO:0005570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nuclear RNA (obsolete GO:0005570)","synonyms":[{"name":"small nuclear RNA","type":"exact"}],"termid":"GO:0005570"}


id: PBO:0039069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 1","termid":"PBO:0039069"}


id: PBO:0086494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphomutase; contains a region homologous to the active site of phosphomutases; overexpression suppresses the histidine auxotrophy of an ade3 ade16 ade17 triple mutant and the temperature sensitivity of a tps2 mutant","termid":"PBO:0086494"}


id: GO:0048929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an efferent axon in the posterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in the posterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efferent axon development in a lateral line nerve","termid":"GO:0048894"},{"relation_name":"part_of","term_name":"posterior lateral line nerve development","termid":"GO:0048918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"efferent axon development in posterior lateral line nerve","termid":"GO:0048929"}


id: PBO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 15 like 2","termid":"PBO:0042600"}


id: PBO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of Rad Wee1","termid":"PBO:0033821"}


id: PR:O94723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L20, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.11","synonyms":[{"name":"Spom972h-mrpl20","type":"exact"}],"termid":"PR:O94723"}


id: PBO:0091503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-L/borderline left, centromere proximal ncRNA","termid":"PBO:0091503"}


id: PBO:0059260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L24","termid":"PBO:0059260"}


id: PBO:0075361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 2","termid":"PBO:0075361"}


id: GO:0052783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving reuteran, a soluble glucan polymer with mainly alpha-(1->4) glycosidic linkages and significant amounts of alpha-(1->6) and alpha-(1->4,6) glucosidic linkages.","definition_xrefs":["PMID:16000808","PMID:15256553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"reuteran metabolic process","termid":"GO:0052783"}


id: MOD:00806
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O3-(N-acetylaminoglucosyl)-L-threonine.","definition_xrefs":["PubMed:8404891","PubMed:3086323","RESID:AA0399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-threonine","termid":"MOD:01676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)glucosyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosyloxy)butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) threonine","type":"exact"},{"name":"CARBOHYD O-linked (HexNAc)","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-glucopyranosyl)-L-threonine","type":"exact"},{"name":"O-(N-acetylamino)glucosyl-L-threonine","type":"exact"},{"name":"O-(N-acetylglucosaminyl)-L-threonine","type":"exact"},{"name":"O-glycosylthreonine","type":"exact"},{"name":"O-threonyl-beta-N-acetylglucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-threonine","type":"exact"},{"name":"O3-(N-acetylglucosaminyl)threonine","type":"exact"},{"name":"OGlcNAcThr","type":"exact"}],"termid":"MOD:00806"}


id: PBO:0055281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2708","termid":"PBO:0055281"}


id: PBO:0091090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk31","termid":"PBO:0091090"}


