# genes

id: SJAG_01723
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB06676","EnsemblGenomes-Gn:SJAG_01723","GOA:B6JYQ8","UniProtKB/TrEMBL:B6JYQ8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"byr2","uniquename":"SJAG_01718"},{"name":"mrpl7","uniquename":"SJAG_01719"},{"name":"esl1","uniquename":"SJAG_01720"},{"name":"rpl17a","uniquename":"SJAG_01721"},{"name":"osh2","uniquename":"SJAG_01722"},{"uniquename":"SJAG_01723"},{"name":"ceg1","uniquename":"SJAG_01724"},{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"}],"genes_by_uniquename":{"SJAG_01723":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.3","end_pos":2228393,"start_pos":2228199,"strand":"reverse"},"product":"Schizosaccharomyces japonicus specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01723.1"],"transcripts_by_uniquename":{"SJAG_01723.1":null},"uniprot_identifier":"B6JYQ8","uniquename":"SJAG_01723"}


id: SJAG_01724
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":63,"start":63}}],"cv_annotations":{"biological_process":[{"annotations":[75907],"is_not":false,"summary":null,"term":"GO:0006370"}],"cellular_component":[{"annotations":[64010],"is_not":false,"summary":null,"term":"GO:0031533"}],"molecular_function":[{"annotations":[64009],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[75906],"is_not":false,"summary":null,"term":"GO:0004484"}]},"dbxrefs":["InterPro:IPR001339","UniProtKB/TrEMBL:B6JYQ9","EnsemblGenomes-Gn:SJAG_01724","EnsemblGenomes-Tr:EEB06677","InterPro:IPR013846","InterPro:IPR017075","InterPro:IPR012340","GOA:B6JYQ9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":415,"start":369}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl7","uniquename":"SJAG_01719"},{"name":"esl1","uniquename":"SJAG_01720"},{"name":"rpl17a","uniquename":"SJAG_01721"},{"name":"osh2","uniquename":"SJAG_01722"},{"uniquename":"SJAG_01723"},{"name":"ceg1","uniquename":"SJAG_01724"},{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"}],"genes_by_uniquename":{"HGNC:10073":null,"SJAG_01724":null,"SPBC2F12.08c":null,"YGL130W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"mRNA capping enzyme, C-terminal domain","id":"PF03919","interpro_description":"mRNA capping enzyme, C-terminal","interpro_id":"IPR013846","interpro_name":"mRNA_cap_enzyme_C","locations":[{"end":353,"start":242}],"match_end":353,"match_start":242,"name":"mRNA_cap_C"},{"dbname":"PFAM","description":"mRNA capping enzyme, catalytic domain","id":"PF01331","interpro_description":"mRNA capping enzyme, adenylation domain","interpro_id":"IPR001339","interpro_name":"mRNA_cap_enzyme_adenylation","locations":[{"end":237,"start":41}],"match_end":237,"match_start":41,"name":"mRNA_cap_enzyme"},{"dbname":"CDD","description":"Adenylation_mRNA_capping","id":"cd07895","interpro_description":"mRNA capping enzyme, adenylation domain","interpro_id":"IPR001339","interpro_name":"mRNA_cap_enzyme_adenylation","locations":[{"end":237,"start":17}],"match_end":237,"match_start":17,"name":"Adenylation_mRNA_capping"},{"dbname":"FUNFAM","description":"mRNA-capping enzyme subunit alpha","id":"G3DSA:3.30.470.30:FF:000011","locations":[{"end":238,"start":4}],"match_end":238,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":369,"start":241}],"match_end":369,"match_start":241,"name":"Nucleic acid-binding proteins"},{"dbname":"SUPERFAMILY","id":"SSF56091","locations":[{"end":237,"start":12}],"match_end":237,"match_start":12,"name":"DNA ligase/mRNA capping enzyme, catalytic domain"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":368,"start":235}],"match_end":368,"match_start":235},{"dbname":"GENE3D","id":"G3DSA:3.30.470.30","locations":[{"end":234,"start":7}],"match_end":234,"match_start":7,"name":"DNA ligase/mRNA capping enzyme"},{"dbname":"PANTHER","id":"PTHR10367","interpro_description":"mRNA Capping Enzyme and RNA Phosphatase","interpro_id":"IPR051029","interpro_name":"mRNA_Capping_Enz/RNA_Phosphat","locations":[{"end":355,"start":32}],"match_end":355,"match_start":32,"name":"MRNA-CAPPING ENZYME"},{"dbname":"PIRSF","id":"PIRSF036959","interpro_description":"mRNA capping enzyme, alpha subunit","interpro_id":"IPR017075","interpro_name":"mRNA_cap_enzyme_alpha","locations":[{"end":414,"start":2}],"match_end":414,"match_start":2,"name":"mRNA_cap_alpha"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":415,"start":369}],"match_end":415,"match_start":369,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":388,"start":369},{"end":415,"start":395}],"match_end":415,"match_start":369,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2229734,"start_pos":2228487,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":370,"start":356}}],"name":"ceg1","ortholog_annotations":[{"gene_uniquename":"SJAG_01724","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10073","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01724","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC2F12.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01724","ortholog_taxonid":4932,"ortholog_uniquename":"YGL130W","reference_uniquename":"PMID:29761456"}],"product":"mRNA guanylyltransferase Ceg1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004484"]}},"subset_termids":["GO:0140098","GO:0016071","GO:0005634","GO:0016779"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004484":null,"GO:0005524":null,"GO:0006370":null,"GO:0031533":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01724.1"],"transcripts_by_uniquename":{"SJAG_01724.1":null},"uniprot_identifier":"B6JYQ9","uniquename":"SJAG_01724"}


id: SJAG_01725
data:
  {"coiled_coil_coords":[{"range":{"end":368,"start":341}}],"cv_annotations":{"biological_process":[{"annotations":[73114],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[108602],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[73113],"is_not":false,"summary":null,"term":"GO:0000981"},{"annotations":[73112],"is_not":false,"summary":null,"term":"GO:0000978"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01725","InterPro:IPR004827","UniProtKB/TrEMBL:B6JYR0","EnsemblGenomes-Tr:EEB06678","GOA:B6JYR0","InterPro:IPR002112"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":45,"start":11}},{"range":{"end":230,"start":166}},{"range":{"end":331,"start":249}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"esl1","uniquename":"SJAG_01720"},{"name":"rpl17a","uniquename":"SJAG_01721"},{"name":"osh2","uniquename":"SJAG_01722"},{"uniquename":"SJAG_01723"},{"name":"ceg1","uniquename":"SJAG_01724"},{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"}],"genes_by_uniquename":{"SJAG_01725":null,"SPBC2F12.09c":null,"YNL167C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"bZIP transcription factor","id":"PF00170","interpro_description":"Basic-leucine zipper domain","interpro_id":"IPR004827","interpro_name":"bZIP","locations":[{"end":369,"start":309}],"match_end":369,"match_start":309,"name":"bZIP_1"},{"dbname":"CDD","description":"bZIP_ATF2","id":"cd14687","locations":[{"end":371,"start":311}],"match_end":371,"match_start":311,"name":"bZIP_ATF2"},{"dbname":"PROSITE_PATTERNS","description":"Basic-leucine zipper (bZIP) domain signature.","id":"PS00036","interpro_description":"Basic-leucine zipper domain","interpro_id":"IPR004827","interpro_name":"bZIP","locations":[{"end":329,"start":314}],"match_end":329,"match_start":314,"name":"BZIP_BASIC"},{"dbname":"PROSITE_PROFILES","description":"Basic-leucine zipper (bZIP) domain profile.","id":"PS50217","interpro_description":"Basic-leucine zipper domain","interpro_id":"IPR004827","interpro_name":"bZIP","locations":[{"end":372,"start":309}],"match_end":372,"match_start":309,"name":"BZIP"},{"dbname":"SMART","id":"SM00338","interpro_description":"Basic-leucine zipper domain","interpro_id":"IPR004827","interpro_name":"bZIP","locations":[{"end":371,"start":307}],"match_end":371,"match_start":307,"name":"brlzneu"},{"dbname":"PRINTS","description":"Jun transcription factor signature","id":"PR00043","interpro_description":"Transcription factor Jun","interpro_id":"IPR002112","interpro_name":"Leuzip_Jun","locations":[{"end":334,"start":318},{"end":380,"start":351}],"match_end":380,"match_start":318,"name":"LEUZIPPRJUN"},{"dbname":"SUPERFAMILY","id":"SSF57959","interpro_description":"Basic-leucine zipper domain superfamily","interpro_id":"IPR046347","interpro_name":"bZIP_sf","locations":[{"end":371,"start":311}],"match_end":371,"match_start":311,"name":"Leucine zipper domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.5.170","locations":[{"end":371,"start":311}],"match_end":371,"match_start":311},{"dbname":"PANTHER","id":"PTHR19304","interpro_description":"Basic leucine zipper (bZIP) transcription factors","interpro_id":"IPR051027","interpro_name":"bZIP_transcription_factors","locations":[{"end":390,"start":34}],"match_end":390,"match_start":34,"name":"CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":368,"start":341}],"match_end":368,"match_start":341,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":45,"start":11},{"end":230,"start":166},{"end":331,"start":249}],"match_end":331,"match_start":11,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":208,"start":194},{"end":278,"start":264}],"match_end":278,"match_start":194,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":219,"start":209},{"end":320,"start":309}],"match_end":320,"match_start":209,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2231440,"start_pos":2230244,"strand":"reverse"},"name":"atf21","ortholog_annotations":[{"gene_uniquename":"SJAG_01725","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC2F12.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01725","ortholog_taxonid":4932,"ortholog_uniquename":"YNL167C","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription factor, Atf-CREB family Atf21","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978"],"not-binding":["GO:0000981"]}},"subset_termids":["GO:0003700","GO:0006355","GO:0006351","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0000981":null,"GO:0005634":null,"GO:0006357":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01725.1"],"transcripts_by_uniquename":{"SJAG_01725.1":null},"uniprot_identifier":"B6JYR0","uniquename":"SJAG_01725"}


id: SJAG_01727
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108608],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[108606],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[108609],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR036610","GOA:B6JYR1","UniProtKB/TrEMBL:B6JYR1","EnsemblGenomes-Tr:EEB06679","InterPro:IPR008914","EnsemblGenomes-Gn:SJAG_01727","InterPro:IPR035810"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl17a","uniquename":"SJAG_01721"},{"name":"osh2","uniquename":"SJAG_01722"},{"uniquename":"SJAG_01723"},{"name":"ceg1","uniquename":"SJAG_01724"},{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"}],"genes_by_uniquename":{"HGNC:14033":null,"SJAG_01727":null,"SPBC2F12.10":null,"YDR322W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphatidylethanolamine-binding protein","id":"PF01161","interpro_description":"Phosphatidylethanolamine-binding protein","interpro_id":"IPR008914","interpro_name":"PEBP","locations":[{"end":280,"start":178}],"match_end":280,"match_start":178,"name":"PBP"},{"dbname":"CDD","description":"PEBP_euk","id":"cd00866","interpro_description":"Phosphatidylethanolamine-binding protein, eukaryotic","interpro_id":"IPR035810","interpro_name":"PEBP_euk","locations":[{"end":289,"start":136}],"match_end":289,"match_start":136,"name":"PEBP_euk"},{"dbname":"SUPERFAMILY","id":"SSF49777","interpro_description":"PEBP-like superfamily","interpro_id":"IPR036610","interpro_name":"PEBP-like_sf","locations":[{"end":292,"start":106}],"match_end":292,"match_start":106,"name":"PEBP-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.1180","locations":[{"end":109,"start":3}],"match_end":109,"match_start":3},{"dbname":"GENE3D","id":"G3DSA:3.90.280.10","interpro_description":"PEBP-like superfamily","interpro_id":"IPR036610","interpro_name":"PEBP-like_sf","locations":[{"end":311,"start":112}],"match_end":311,"match_start":112},{"dbname":"PANTHER","id":"PTHR11362","interpro_description":"Phosphatidylethanolamine-binding protein, eukaryotic","interpro_id":"IPR035810","interpro_name":"PEBP_euk","locations":[{"end":292,"start":114}],"match_end":292,"match_start":114,"name":"PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":2234114,"start_pos":2233158,"strand":"forward"},"name":"mrpl35","ortholog_annotations":[{"gene_uniquename":"SJAG_01727","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14033","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01727","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC2F12.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01727","ortholog_taxonid":4932,"ortholog_uniquename":"YDR322W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01727","ortholog_taxonid":4932,"ortholog_uniquename":"YDR322W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L38","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005739","GO:0140053","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01727.1"],"transcripts_by_uniquename":{"SJAG_01727.1":null},"uniprot_identifier":"B6JYR1","uniquename":"SJAG_01727"}


id: SJAG_01728
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108612],"is_not":false,"summary":null,"term":"GO:0000122"}],"cellular_component":[{"annotations":[108610],"is_not":false,"summary":null,"term":"GO:0030907"}],"molecular_function":[{"annotations":[108614],"is_not":false,"summary":null,"term":"GO:0062070"},{"annotations":[108615],"is_not":false,"summary":null,"term":"GO:0003713"},{"annotations":[108616],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06680","UniProtKB/TrEMBL:B6JYR2","EnsemblGenomes-Gn:SJAG_01728"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"osh2","uniquename":"SJAG_01722"},{"uniquename":"SJAG_01723"},{"name":"ceg1","uniquename":"SJAG_01724"},{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"}],"genes_by_uniquename":{"SJAG_01728":null,"SPBC2F12.11c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":2235256,"start_pos":2234606,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":153,"start":135}}],"name":"rep2","ortholog_annotations":[{"gene_uniquename":"SJAG_01728","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC2F12.11c","reference_uniquename":"PMID:21511999"}],"product":"MBF transcription factor activator Rep2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0062070","GO:0008270"],"not-binding":["GO:0003713"]}},"subset_termids":["GO:0003713","GO:0060090","GO:0005634","GO:0003712","GO:0006351","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0003713":null,"GO:0008270":null,"GO:0030907":null,"GO:0062070":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01728.1"],"transcripts_by_uniquename":{"SJAG_01728.1":null},"uniprot_identifier":"B6JYR2","uniquename":"SJAG_01728"}


id: SJAG_01730
data:
  {"coiled_coil_coords":[{"range":{"end":72,"start":52}},{"range":{"end":97,"start":77}}],"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB06681","UniProtKB/TrEMBL:B6JYR3","EnsemblGenomes-Gn:SJAG_01730"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":188,"start":70}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01723"},{"name":"ceg1","uniquename":"SJAG_01724"},{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"}],"genes_by_uniquename":{"SJAG_01730":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":72,"start":52},{"end":97,"start":77}],"match_end":97,"match_start":52,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":188,"start":70}],"match_end":188,"match_start":70,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":103,"start":78},{"end":141,"start":131},{"end":174,"start":152}],"match_end":174,"match_start":78,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2236950,"start_pos":2236329,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":138,"start":127}}],"product":"Schizosaccharomyces japonicus specific intrinsically disordered protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01730.1"],"transcripts_by_uniquename":{"SJAG_01730.1":null},"uniprot_identifier":"B6JYR3","uniquename":"SJAG_01730"}


id: SJAG_01731
data:
  {"coiled_coil_coords":[{"range":{"end":939,"start":912}}],"cv_annotations":{"biological_process":[{"annotations":[74898],"is_not":false,"summary":null,"term":"GO:0045332"}],"cellular_component":[{"annotations":[98282],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[98283],"is_not":false,"summary":null,"term":"GO:1990531"},{"annotations":[74899],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[62719],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[62721],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[98288],"is_not":false,"summary":null,"term":"GO:0140351"},{"annotations":[62718],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[98290],"is_not":false,"summary":null,"term":"GO:0140345"},{"annotations":[98291],"is_not":false,"summary":null,"term":"GO:0090554"},{"annotations":[98292],"is_not":false,"summary":null,"term":"GO:0090555"},{"annotations":[98293],"is_not":false,"summary":null,"term":"GO:0090556"}]},"dbxrefs":["InterPro:IPR032630","InterPro:IPR001757","InterPro:IPR032631","UniProtKB/TrEMBL:B6JYR4","InterPro:IPR023298","GOA:B6JYR4","InterPro:IPR018303","InterPro:IPR006539","InterPro:IPR023299","InterPro:IPR026871","InterPro:IPR008250","EnsemblGenomes-Tr:EEB06682","InterPro:IPR023214","EnsemblGenomes-Gn:SJAG_01731","InterPro:IPR036412"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":67,"start":29}},{"range":{"end":248,"start":218}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ceg1","uniquename":"SJAG_01724"},{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"}],"genes_by_uniquename":{"HGNC:13542":null,"HGNC:13543":null,"HGNC:13549":null,"SJAG_01731":null,"SPAC4F10.16c":null,"YDR093W":null,"YER166W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phospholipid-translocating P-type ATPase C-terminal","id":"PF16212","interpro_description":"P-type ATPase, C-terminal","interpro_id":"IPR032630","interpro_name":"P_typ_ATPase_c","locations":[{"end":1276,"start":1027}],"match_end":1276,"match_start":1027,"name":"PhoLip_ATPase_C"},{"dbname":"PFAM","description":"Cation transport ATPase (P-type)","id":"PF13246","locations":[{"end":765,"start":667}],"match_end":765,"match_start":667,"name":"Cation_ATPase"},{"dbname":"PFAM","description":"Phospholipid-translocating ATPase N-terminal","id":"PF16209","interpro_description":"P-type ATPase, N-terminal","interpro_id":"IPR032631","interpro_name":"P-type_ATPase_N","locations":[{"end":144,"start":79}],"match_end":144,"match_start":79,"name":"PhoLip_ATPase_N"},{"dbname":"CDD","description":"P-type_ATPase_APLT_Dnf-like","id":"cd02073","locations":[{"end":1159,"start":98}],"match_end":1159,"match_start":98,"name":"P-type_ATPase_APLT_Dnf-like"},{"dbname":"PROSITE_PATTERNS","description":"E1-E2 ATPases phosphorylation site.","id":"PS00154","interpro_description":"P-type ATPase, phosphorylation site","interpro_id":"IPR018303","interpro_name":"ATPase_P-typ_P_site","locations":[{"end":571,"start":565}],"match_end":571,"match_start":565,"name":"ATPASE_E1_E2"},{"dbname":"PRINTS","description":"P-type cation-transporting ATPase superfamily signature","id":"PR00119","locations":[{"end":577,"start":563},{"end":1018,"start":999}],"match_end":1018,"match_start":563,"name":"CATATPASE"},{"dbname":"FUNFAM","description":"Phospholipid-transporting ATPase","id":"G3DSA:3.40.50.1000:FF:000014","locations":[{"end":1039,"start":837}],"match_end":1039,"match_start":837},{"dbname":"FUNFAM","description":"Phospholipid-transporting ATPase IC","id":"G3DSA:3.40.50.1000:FF:000001","locations":[{"end":572,"start":560}],"match_end":572,"match_start":560},{"dbname":"SUPERFAMILY","id":"SSF81653","interpro_description":"P-type ATPase, A domain superfamily","interpro_id":"IPR008250","interpro_name":"ATPase_P-typ_transduc_dom_A_sf","locations":[{"end":343,"start":283},{"end":430,"start":393}],"match_end":430,"match_start":283,"name":"Calcium ATPase, transduction domain A"},{"dbname":"SUPERFAMILY","id":"SSF81660","interpro_description":"P-type ATPase, cytoplasmic domain N","interpro_id":"IPR023299","interpro_name":"ATPase_P-typ_cyto_dom_N","locations":[{"end":604,"start":570},{"end":798,"start":647}],"match_end":798,"match_start":570,"name":"Metal cation-transporting ATPase, ATP-binding domain N"},{"dbname":"SUPERFAMILY","id":"SSF81665","interpro_description":"P-type ATPase, transmembrane domain superfamily","interpro_id":"IPR023298","interpro_name":"ATPase_P-typ_TM_dom_sf","locations":[{"end":183,"start":92},{"end":557,"start":435},{"end":1271,"start":1048}],"match_end":1271,"match_start":92,"name":"Calcium ATPase, transmembrane domain M"},{"dbname":"SUPERFAMILY","id":"SSF56784","interpro_description":"HAD-like superfamily","interpro_id":"IPR036412","interpro_name":"HAD-like_sf","locations":[{"end":574,"start":558},{"end":884,"start":778},{"end":1053,"start":955}],"match_end":1053,"match_start":558,"name":"HAD-like"},{"dbname":"GENE3D","id":"G3DSA:2.70.150.10","locations":[{"end":341,"start":221},{"end":434,"start":388}],"match_end":434,"match_start":221},{"dbname":"GENE3D","id":"G3DSA:3.40.1110.10","interpro_description":"P-type ATPase, cytoplasmic domain N","interpro_id":"IPR023299","interpro_name":"ATPase_P-typ_cyto_dom_N","locations":[{"end":812,"start":684}],"match_end":812,"match_start":684},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1000","interpro_description":"HAD superfamily","interpro_id":"IPR023214","interpro_name":"HAD_sf","locations":[{"end":1039,"start":833}],"match_end":1039,"match_start":833},{"dbname":"PANTHER","id":"PTHR24092","locations":[{"end":1291,"start":70}],"match_end":1291,"match_start":70,"name":"PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":939,"start":912}],"match_end":939,"match_start":912,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":67,"start":29},{"end":248,"start":218}],"match_end":248,"match_start":29,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":236,"start":220}],"match_end":236,"match_start":220,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":60,"start":42}],"match_end":60,"match_start":42,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"HAD-IC family P-type ATPase","id":"TIGR01494","interpro_description":"P-type ATPase","interpro_id":"IPR001757","interpro_name":"P_typ_ATPase","locations":[{"end":1080,"start":971}],"match_end":1080,"match_start":971,"name":"ATPase_P-type"},{"dbname":"NCBIFAM","description":"phospholipid-translocating P-type ATPase","id":"TIGR01652","interpro_description":"P-type ATPase, subfamily IV","interpro_id":"IPR006539","interpro_name":"P-type_ATPase_IV","locations":[{"end":1284,"start":96}],"match_end":1284,"match_start":96,"name":"ATPase-Plipid"},{"dbname":"SFLD","description":"C1.7: P-type atpase like","id":"SFLDG00002","locations":[{"end":1050,"start":545}],"match_end":1050,"match_start":545,"name":"C1.7:_P-type_atpase_like"},{"dbname":"SFLD","description":"p-type atpase","id":"SFLDF00027","interpro_description":"P-type ATPase, haloacid dehalogenase domain","interpro_id":"IPR044492","interpro_name":"P_typ_ATPase_HD_dom","locations":[{"end":1050,"start":545}],"match_end":1050,"match_start":545,"name":"p-type_atpase"}],"location":{"chromosome_name":"supercont5.3","end_pos":2241592,"start_pos":2237372,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":237,"start":219}},{"range":{"end":918,"start":905}},{"range":{"end":973,"start":964}},{"range":{"end":1044,"start":1033}},{"range":{"end":1261,"start":1252}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01731","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13542","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01731","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13543","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01731","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13549","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01731","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01731","ortholog_taxonid":4932,"ortholog_uniquename":"YDR093W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01731","ortholog_taxonid":4932,"ortholog_uniquename":"YDR093W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01731","ortholog_taxonid":4932,"ortholog_uniquename":"YER166W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01731","ortholog_taxonid":4932,"ortholog_uniquename":"YER166W","reference_uniquename":"PMID:26896847"}],"product":"plasma membrane phospholipid-translocating ATPase complex, ATPase subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0000287"],"not-binding":["GO:0140345","GO:0090554","GO:0090556","GO:0016887","GO:0140351","GO:0090555"]}},"subset_termids":["GO:0005783","GO:0061024","GO:0016887","GO:0140303","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0005524":null,"GO:0005783":null,"GO:0005886":null,"GO:0016887":null,"GO:0045332":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140345":null,"GO:0140351":null,"GO:1990531":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":474,"start":452}},{"assigned_by":"TMHMM","range":{"end":517,"start":495}},{"assigned_by":"TMHMM","range":{"end":1079,"start":1057}},{"assigned_by":"TMHMM","range":{"end":1108,"start":1086}},{"assigned_by":"TMHMM","range":{"end":1163,"start":1141}},{"assigned_by":"TMHMM","range":{"end":1205,"start":1183}},{"assigned_by":"TMHMM","range":{"end":1231,"start":1209}},{"assigned_by":"TMHMM","range":{"end":1265,"start":1243}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01731.1"],"transcripts_by_uniquename":{"SJAG_01731.1":null},"uniprot_identifier":"B6JYR4","uniquename":"SJAG_01731"}


id: SJAG_01732
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98274],"is_not":false,"summary":null,"term":"GO:0000147"},{"annotations":[98275],"is_not":false,"summary":null,"term":"GO:0090135"},{"annotations":[98276],"is_not":false,"summary":null,"term":"GO:0034314"},{"annotations":[98277],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[98278],"is_not":false,"summary":null,"term":"GO:0007163"},{"annotations":[98279],"is_not":false,"summary":null,"term":"GO:1903475"}],"cellular_component":[{"annotations":[98271],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[98272],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[98273],"is_not":false,"summary":null,"term":"GO:0031097"}],"molecular_function":[{"annotations":[98281],"is_not":false,"summary":null,"term":"GO:0071933"}],"mondo":[{"annotations":[87549],"is_not":false,"summary":null,"term":"MONDO:0010743"},{"annotations":[86281],"is_not":false,"summary":null,"term":"MONDO:0010518"},{"annotations":[86989],"is_not":false,"summary":null,"term":"MONDO:0010294"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01732","InterPro:IPR033927","UniProtKB/TrEMBL:B6JYR5","InterPro:IPR000697","EnsemblGenomes-Tr:EEB06683","InterPro:IPR011993"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":171,"start":135}},{"range":{"end":403,"start":212}},{"range":{"end":439,"start":419}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atf21","uniquename":"SJAG_01725"},{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"}],"genes_by_uniquename":{"HGNC:12731":null,"HGNC:12735":null,"SJAG_01732":null,"SPAC4F10.15c":null,"YOR181W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WH1 domain","id":"PF00568","interpro_description":"WH1/EVH1 domain","interpro_id":"IPR000697","interpro_name":"WH1/EVH1_dom","locations":[{"end":125,"start":21}],"match_end":125,"match_start":21,"name":"WH1"},{"dbname":"CDD","description":"EVH1_WASP-like","id":"cd01205","interpro_description":"WASP family, EVH1 domain","interpro_id":"IPR033927","interpro_name":"WASPfam_EVH1","locations":[{"end":126,"start":26}],"match_end":126,"match_start":26,"name":"EVH1_WASP-like"},{"dbname":"PROSITE_PROFILES","description":"WH1 domain profile.","id":"PS50229","interpro_description":"WH1/EVH1 domain","interpro_id":"IPR000697","interpro_name":"WH1/EVH1_dom","locations":[{"end":130,"start":19}],"match_end":130,"match_start":19,"name":"WH1"},{"dbname":"SMART","id":"SM00461","interpro_description":"WH1/EVH1 domain","interpro_id":"IPR000697","interpro_name":"WH1/EVH1_dom","locations":[{"end":127,"start":20}],"match_end":127,"match_start":20,"name":"WH1_2"},{"dbname":"FUNFAM","description":"Actin associated protein","id":"G3DSA:2.30.29.30:FF:000281","locations":[{"end":135,"start":4}],"match_end":135,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":125,"start":19}],"match_end":125,"match_start":19,"name":"PH domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":131,"start":1}],"match_end":131,"match_start":1},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":171,"start":135},{"end":403,"start":212},{"end":439,"start":419}],"match_end":439,"match_start":135,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":171,"start":148},{"end":234,"start":221},{"end":263,"start":244},{"end":319,"start":295},{"end":358,"start":348}],"match_end":358,"match_start":148,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":439,"start":430}],"match_end":439,"match_start":430,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2244113,"start_pos":2242670,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":175,"start":137}},{"range":{"end":284,"start":220}},{"range":{"end":318,"start":294}},{"range":{"end":337,"start":324}},{"range":{"end":386,"start":347}}],"name":"wsp1","ortholog_annotations":[{"gene_uniquename":"SJAG_01732","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12731","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01732","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12735","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01732","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01732","ortholog_taxonid":4932,"ortholog_uniquename":"YOR181W","reference_uniquename":"PMID:29761456"}],"product":"WASp homolog","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0071933"]}},"subset_termids":["GO:0030479","GO:0030036","GO:0000281","GO:0005938","GO:0007163","GO:0016192","MONDO:0005570","MONDO:0005046","GO:0015629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000147":null,"GO:0006897":null,"GO:0007163":null,"GO:0030479":null,"GO:0031097":null,"GO:0034314":null,"GO:0043332":null,"GO:0071933":null,"GO:0090135":null,"GO:1903475":null,"MONDO:0010294":null,"MONDO:0010518":null,"MONDO:0010743":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01732.1"],"transcripts_by_uniquename":{"SJAG_01732.1":null},"uniprot_identifier":"B6JYR5","uniquename":"SJAG_01732"}


id: SJAG_01733
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98270],"is_not":false,"summary":null,"term":"GO:0006613"}],"cellular_component":[{"annotations":[77436],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77437],"is_not":false,"summary":null,"term":"GO:0005854"}]},"dbxrefs":["GOA:B6JYR6","EnsemblGenomes-Tr:EEB06684","EnsemblGenomes-Gn:SJAG_01733","InterPro:IPR038187","UniProtKB/TrEMBL:B6JYR6","InterPro:IPR002715","InterPro:IPR039370"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":37,"start":1}},{"range":{"end":152,"start":125}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl35","uniquename":"SJAG_01727"},{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"}],"genes_by_uniquename":{"HGNC:1125":null,"SJAG_01733":null,"SPAC4F10.14c":null,"YDR252W":null,"YPL037C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NAC domain","id":"PF01849","interpro_description":"Nascent polypeptide-associated complex NAC domain","interpro_id":"IPR002715","interpro_name":"Nas_poly-pep-assoc_cplx_dom","locations":[{"end":94,"start":38}],"match_end":94,"match_start":38,"name":"NAC"},{"dbname":"CDD","description":"NAC_BTF3","id":"cd22055","locations":[{"end":122,"start":4}],"match_end":122,"match_start":4,"name":"NAC_BTF3"},{"dbname":"PROSITE_PROFILES","description":"NAC A/B domain profile.","id":"PS51151","interpro_description":"Nascent polypeptide-associated complex NAC domain","interpro_id":"IPR002715","interpro_name":"Nas_poly-pep-assoc_cplx_dom","locations":[{"end":100,"start":35}],"match_end":100,"match_start":35,"name":"NAC_AB"},{"dbname":"SMART","id":"SM01407","interpro_description":"Nascent polypeptide-associated complex NAC domain","interpro_id":"IPR002715","interpro_name":"Nas_poly-pep-assoc_cplx_dom","locations":[{"end":94,"start":38}],"match_end":94,"match_start":38,"name":"NAC_2"},{"dbname":"FUNFAM","description":"Transcription factor BTF3 homolog","id":"G3DSA:2.20.70.30:FF:000001","locations":[{"end":107,"start":50}],"match_end":107,"match_start":50},{"dbname":"GENE3D","id":"G3DSA:2.20.70.30","interpro_description":"NAC A/B domain superfamily","interpro_id":"IPR038187","interpro_name":"NAC_A/B_dom_sf","locations":[{"end":107,"start":50}],"match_end":107,"match_start":50},{"dbname":"PANTHER","id":"PTHR10351","interpro_description":"Transcription factor BTF3","interpro_id":"IPR039370","interpro_name":"BTF3","locations":[{"end":150,"start":1}],"match_end":150,"match_start":1,"name":"TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":37,"start":1},{"end":152,"start":125}],"match_end":152,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":29,"start":20}],"match_end":29,"match_start":20,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2245368,"start_pos":2244813,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":139,"start":125}}],"name":"btf3","ortholog_annotations":[{"gene_uniquename":"SJAG_01733","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1125","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01733","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01733","ortholog_taxonid":4932,"ortholog_uniquename":"YDR252W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01733","ortholog_taxonid":4932,"ortholog_uniquename":"YDR252W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01733","ortholog_taxonid":4932,"ortholog_uniquename":"YPL037C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01733","ortholog_taxonid":4932,"ortholog_uniquename":"YPL037C","reference_uniquename":"PMID:26896847"}],"product":"nascent polypeptide-associated complex beta subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006605","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0005854":null,"GO:0006613":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01733.1"],"transcripts_by_uniquename":{"SJAG_01733.1":null},"uniprot_identifier":"B6JYR6","uniquename":"SJAG_01733"}


id: SJAG_01734
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110517],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[65337],"is_not":false,"summary":null,"term":"GO:0019430"}],"cellular_component":[{"annotations":[110514],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110515],"is_not":false,"summary":null,"term":"GO:0005763"},{"annotations":[110516],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[65334],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[110520],"is_not":false,"summary":null,"term":"GO:0003735"},{"annotations":[65335],"is_not":false,"summary":null,"term":"GO:0004784"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYR7","EnsemblGenomes-Tr:EEB06685","GOA:B6JYR7","EnsemblGenomes-Gn:SJAG_01734","InterPro:IPR019832","InterPro:IPR036314"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rep2","uniquename":"SJAG_01728"},{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"}],"genes_by_uniquename":{"SJAG_01734":null,"SPBC3H7.04":null,"YDR347W":null,"YJR101W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Iron/manganese superoxide dismutases, C-terminal domain","id":"PF02777","interpro_description":"Manganese/iron superoxide dismutase, C-terminal","interpro_id":"IPR019832","interpro_name":"Mn/Fe_SOD_C","locations":[{"end":216,"start":103}],"match_end":216,"match_start":103,"name":"Sod_Fe_C"},{"dbname":"SUPERFAMILY","id":"SSF54719","interpro_description":"Manganese/iron superoxide dismutase, C-terminal domain superfamily","interpro_id":"IPR036314","interpro_name":"SOD_C_sf","locations":[{"end":221,"start":99}],"match_end":221,"match_start":99,"name":"Fe,Mn superoxide dismutase (SOD), C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.55.40.20","interpro_description":"Manganese/iron superoxide dismutase, C-terminal domain superfamily","interpro_id":"IPR036314","interpro_name":"SOD_C_sf","locations":[{"end":223,"start":97}],"match_end":223,"match_start":97},{"dbname":"PANTHER","id":"PTHR43595","locations":[{"end":222,"start":14}],"match_end":222,"match_start":14,"name":"37S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL"}],"location":{"chromosome_name":"supercont5.3","end_pos":2246280,"start_pos":2245609,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01734","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3H7.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01734","ortholog_taxonid":4932,"ortholog_uniquename":"YDR347W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01734","ortholog_taxonid":4932,"ortholog_uniquename":"YJR101W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01734","ortholog_taxonid":4932,"ortholog_uniquename":"YJR101W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit S43a","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0046872"],"not-binding":["GO:0003735","GO:0004784"]}},"subset_termids":["GO:0140053","GO:0005634","GO:0016491","GO:0098754","GO:0005739","GO:0005198","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0004784":null,"GO:0005634":null,"GO:0005763":null,"GO:0005829":null,"GO:0019430":null,"GO:0032543":null,"GO:0046872":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01734.1"],"transcripts_by_uniquename":{"SJAG_01734.1":null},"uniprot_identifier":"B6JYR7","uniquename":"SJAG_01734"}


id: SJAG_01737
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111240],"is_not":false,"summary":null,"term":"GO:0071630"},{"annotations":[111241],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[111238],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111239],"is_not":false,"summary":null,"term":"GO:0031965"}],"molecular_function":[{"annotations":[111242],"is_not":false,"summary":null,"term":"GO:0000774"},{"annotations":[61186],"is_not":false,"summary":null,"term":"GO:0051087"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06687","InterPro:IPR003103","InterPro:IPR036533","EnsemblGenomes-Gn:SJAG_01737","UniProtKB/TrEMBL:B6JYR9","GOA:B6JYR9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"}],"genes_by_uniquename":{"HGNC:937":null,"SJAG_01737":null,"SPBC530.03c":null,"YIL016W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"BAG domain","id":"PF02179","interpro_description":"BAG domain","interpro_id":"IPR003103","interpro_name":"BAG_domain","locations":[{"end":230,"start":152}],"match_end":230,"match_start":152,"name":"BAG"},{"dbname":"PROSITE_PROFILES","description":"BAG domain profile.","id":"PS51035","interpro_description":"BAG domain","interpro_id":"IPR003103","interpro_name":"BAG_domain","locations":[{"end":232,"start":147}],"match_end":232,"match_start":147,"name":"BAG"},{"dbname":"SMART","id":"SM00264","interpro_description":"BAG domain","interpro_id":"IPR003103","interpro_name":"BAG_domain","locations":[{"end":232,"start":147}],"match_end":232,"match_start":147,"name":"BAG_1"},{"dbname":"SUPERFAMILY","id":"SSF63491","locations":[{"end":232,"start":143}],"match_end":232,"match_start":143,"name":"BAG domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.120","interpro_description":"BAG domain superfamily","interpro_id":"IPR036533","interpro_name":"BAG_dom_sf","locations":[{"end":236,"start":133}],"match_end":236,"match_start":133,"name":"BAG domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":2256239,"start_pos":2255523,"strand":"reverse"},"name":"bag102","ortholog_annotations":[{"gene_uniquename":"SJAG_01737","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:937","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01737","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC530.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01737","ortholog_taxonid":4932,"ortholog_uniquename":"YIL016W","reference_uniquename":"PMID:29761456"}],"product":"BAG family molecular chaperone regulator Bag102","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051087"],"not-binding":["GO:0000774"]}},"subset_termids":["GO:0098772","GO:0005829","GO:0006457","GO:0005634","GO:0051604","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000774":null,"GO:0005829":null,"GO:0006457":null,"GO:0031965":null,"GO:0051087":null,"GO:0071630":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":24,"start":7}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01737.1"],"transcripts_by_uniquename":{"SJAG_01737.1":null},"uniprot_identifier":"B6JYR9","uniquename":"SJAG_01737"}


id: SJAG_01738
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111248],"is_not":false,"summary":null,"term":"GO:0097248"}],"cellular_component":[{"annotations":[111243],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[111244],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[111246],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[111247],"is_not":false,"summary":null,"term":"GO:0031520"}],"molecular_function":[{"annotations":[111249],"is_not":false,"summary":null,"term":"GO:0043495"}]},"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":176,"start":1}},{"range":{"end":286,"start":255}},{"range":{"end":346,"start":323}},{"range":{"end":481,"start":461}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"}],"genes_by_uniquename":{"SJAG_01738":null,"SPBC530.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":176,"start":1},{"end":286,"start":255},{"end":346,"start":323},{"end":481,"start":461}],"match_end":481,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":118,"start":108},{"end":481,"start":470}],"match_end":481,"match_start":108,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":51,"start":34},{"end":86,"start":77},{"end":160,"start":141}],"match_end":160,"match_start":34,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":140,"start":124}],"match_end":140,"match_start":124,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2259150,"start_pos":2257376,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":117,"start":98}},{"range":{"end":272,"start":250}},{"range":{"end":384,"start":372}},{"range":{"end":415,"start":400}},{"range":{"end":486,"start":469}},{"range":{"end":545,"start":526}}],"name":"mod5","ortholog_annotations":[{"gene_uniquename":"SJAG_01738","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC530.04","reference_uniquename":"PMID:21511999"}],"product":"Tea1 anchoring protein Mod5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0043495"]}},"subset_termids":["GO:0005938","GO:0005886","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0009898":null,"GO:0031520":null,"GO:0032153":null,"GO:0043495":null,"GO:0051285":null,"GO:0097248":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01738.1"],"transcripts_by_uniquename":{"SJAG_01738.1":null},"uniprot_identifier":"B6JYS0","uniquename":"SJAG_01738"}


id: SJAG_01739
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[80798],"is_not":false,"summary":null,"term":"GO:0005869"},{"annotations":[66450],"is_not":false,"summary":null,"term":"GO:0001725"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01739","EnsemblGenomes-Tr:EEB06689","UniProtKB/TrEMBL:B6JYS1","GOA:B6JYS1","InterPro:IPR008603"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"}],"genes_by_uniquename":{"SJAG_01739":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Dynactin p62 family","id":"PF05502","interpro_description":"Dynactin subunit 4","interpro_id":"IPR008603","interpro_name":"DCTN4","locations":[{"end":139,"start":54}],"match_end":139,"match_start":54,"name":"Dynactin_p62"},{"dbname":"PANTHER","id":"PTHR13034","interpro_description":"Dynactin subunit 4","interpro_id":"IPR008603","interpro_name":"DCTN4","locations":[{"end":217,"start":47}],"match_end":217,"match_start":47,"name":"DYNACTIN P62 SUBUNIT"}],"location":{"chromosome_name":"supercont5.3","end_pos":2261112,"start_pos":2259691,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":28,"start":15}},{"range":{"end":224,"start":209}}],"product":"dynactin complex subunit 4","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000044":null},"split_by_parent_groups":{},"subset_termids":["GO:0015629","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001725":null,"GO:0005869":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01739.1"],"transcripts_by_uniquename":{"SJAG_01739.1":null},"uniprot_identifier":"B6JYS1","uniquename":"SJAG_01739"}


id: SJAG_01740
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75207],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[111250],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[75208],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[75209],"is_not":false,"summary":null,"term":"GO:0000981"},{"annotations":[111255],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[63129],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01740","EnsemblGenomes-Tr:EEB06690","InterPro:IPR001138","UniProtKB/TrEMBL:B6JYS2","InterPro:IPR007219","InterPro:IPR036864","GOA:B6JYS2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":28,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"}],"genes_by_uniquename":{"SJAG_01740":null,"SPBC530.05":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Fungal Zn(2)-Cys(6) binuclear cluster domain","id":"PF00172","interpro_description":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_id":"IPR001138","interpro_name":"Zn2Cys6_DnaBD","locations":[{"end":73,"start":36}],"match_end":73,"match_start":36,"name":"Zn_clus"},{"dbname":"PFAM","description":"Fungal specific transcription factor domain","id":"PF04082","interpro_description":"Transcription factor domain, fungi","interpro_id":"IPR007219","interpro_name":"Transcription_factor_dom_fun","locations":[{"end":459,"start":218}],"match_end":459,"match_start":218,"name":"Fungal_trans"},{"dbname":"CDD","description":"fungal_TF_MHR","id":"cd12148","locations":[{"end":595,"start":209}],"match_end":595,"match_start":209,"name":"fungal_TF_MHR"},{"dbname":"CDD","description":"GAL4","id":"cd00067","interpro_description":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_id":"IPR001138","interpro_name":"Zn2Cys6_DnaBD","locations":[{"end":68,"start":33}],"match_end":68,"match_start":33,"name":"GAL4"},{"dbname":"PROSITE_PATTERNS","description":"Zn(2)-C6 fungal-type DNA-binding domain signature.","id":"PS00463","interpro_description":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_id":"IPR001138","interpro_name":"Zn2Cys6_DnaBD","locations":[{"end":65,"start":37}],"match_end":65,"match_start":37,"name":"ZN2_CY6_FUNGAL_1"},{"dbname":"PROSITE_PROFILES","description":"Zn(2)-C6 fungal-type DNA-binding domain profile.","id":"PS50048","interpro_description":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_id":"IPR001138","interpro_name":"Zn2Cys6_DnaBD","locations":[{"end":67,"start":37}],"match_end":67,"match_start":37,"name":"ZN2_CY6_FUNGAL_2"},{"dbname":"SMART","id":"SM00906","interpro_description":"Transcription factor domain, fungi","interpro_id":"IPR007219","interpro_name":"Transcription_factor_dom_fun","locations":[{"end":396,"start":323}],"match_end":396,"match_start":323,"name":"Fungal_trans_2"},{"dbname":"SMART","id":"SM00066","interpro_description":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_id":"IPR001138","interpro_name":"Zn2Cys6_DnaBD","locations":[{"end":76,"start":32}],"match_end":76,"match_start":32,"name":"gal4_2"},{"dbname":"SUPERFAMILY","id":"SSF57701","interpro_description":"Zn(2)-C6 fungal-type DNA-binding domain superfamily","interpro_id":"IPR036864","interpro_name":"Zn2-C6_fun-type_DNA-bd_sf","locations":[{"end":74,"start":28}],"match_end":74,"match_start":28,"name":"Zn2/Cys6 DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:4.10.240.10","interpro_description":"Zn(2)-C6 fungal-type DNA-binding domain superfamily","interpro_id":"IPR036864","interpro_name":"Zn2-C6_fun-type_DNA-bd_sf","locations":[{"end":94,"start":29}],"match_end":94,"match_start":29},{"dbname":"PANTHER","id":"PTHR46910","interpro_description":"ABC-transporter-regulating transcription factor-like","interpro_id":"IPR050987","interpro_name":"AtrR-like","locations":[{"end":698,"start":28}],"match_end":698,"match_start":28,"name":"TRANSCRIPTION FACTOR PDR1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":28,"start":1}],"match_end":28,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2263762,"start_pos":2261438,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":16,"start":9}},{"range":{"end":135,"start":117}},{"range":{"end":182,"start":169}},{"range":{"end":625,"start":615}}],"name":"prt1","ortholog_annotations":[{"gene_uniquename":"SJAG_01740","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC530.05","reference_uniquename":"PMID:21511999"}],"product":"DNA-binding transcription factor Prt1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978","GO:0008270"],"not-binding":["GO:0000981"]}},"subset_termids":["GO:0003700","GO:0006355","GO:0005829","GO:0005634","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0000981":null,"GO:0005634":null,"GO:0005829":null,"GO:0008270":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01740.1"],"transcripts_by_uniquename":{"SJAG_01740.1":null},"uniprot_identifier":"B6JYS2","uniquename":"SJAG_01740"}


id: SJAG_01741
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76778],"is_not":false,"summary":null,"term":"GO:0048312"},{"annotations":[111259],"is_not":false,"summary":null,"term":"GO:0007005"}],"cellular_component":[{"annotations":[76776],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[76777],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["InterPro:IPR033646","GOA:B6JYS3","EnsemblGenomes-Tr:EEB06691","InterPro:IPR011990","InterPro:IPR028275","EnsemblGenomes-Gn:SJAG_01741","InterPro:IPR025697","UniProtKB/TrEMBL:B6JYS3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":23,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"}],"genes_by_uniquename":{"HGNC:29094":null,"SJAG_01741":null,"SPBC530.06c":null,"YMR012W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Translation initiation factor eIF3 subunit 135","id":"PF12807","interpro_description":"CLU central domain","interpro_id":"IPR033646","interpro_name":"CLU-central","locations":[{"end":836,"start":680}],"match_end":836,"match_start":680,"name":"eIF3_p135"},{"dbname":"PFAM","description":"Clustered mitochondria","id":"PF13236","interpro_description":"CLU domain","interpro_id":"IPR025697","interpro_name":"CLU_dom","locations":[{"end":560,"start":338}],"match_end":560,"match_start":338,"name":"CLU"},{"dbname":"PFAM","description":"Mitochondrial function, CLU-N-term","id":"PF15044","interpro_description":"Clustered mitochondria protein, N-terminal","interpro_id":"IPR028275","interpro_name":"CLU_N","locations":[{"end":126,"start":53}],"match_end":126,"match_start":53,"name":"CLU_N"},{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13374","locations":[{"end":977,"start":938},{"end":1021,"start":984}],"match_end":1021,"match_start":938,"name":"TPR_10"},{"dbname":"CDD","description":"CLU-central","id":"cd15466","interpro_description":"CLU central domain","interpro_id":"IPR033646","interpro_name":"CLU-central","locations":[{"end":836,"start":682}],"match_end":836,"match_start":682,"name":"CLU-central"},{"dbname":"PROSITE_PROFILES","description":"Clueless (Clu) domain profile.","id":"PS51823","interpro_description":"CLU domain","interpro_id":"IPR025697","interpro_name":"CLU_dom","locations":[{"end":561,"start":317}],"match_end":561,"match_start":317,"name":"CLU"},{"dbname":"SUPERFAMILY","id":"SSF103107","interpro_description":"GSKIP domain superfamily","interpro_id":"IPR023231","interpro_name":"GSKIP_dom_sf","locations":[{"end":286,"start":189}],"match_end":286,"match_start":189,"name":"Hypothetical protein c14orf129, hspc210"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":1070,"start":937}],"match_end":1070,"match_start":937,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":1123,"start":846}],"match_end":1123,"match_start":846,"name":"Tetratricopeptide repeat domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.2280.10","interpro_description":"GSKIP domain superfamily","interpro_id":"IPR023231","interpro_name":"GSKIP_dom_sf","locations":[{"end":292,"start":212}],"match_end":292,"match_start":212,"name":"Hypothetical protein (hspc210)"},{"dbname":"PANTHER","id":"PTHR12601","interpro_description":"CLU domain containing protein","interpro_id":"IPR027523","interpro_name":"CLU_prot","locations":[{"end":1140,"start":7}],"match_end":1140,"match_start":7,"name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT  EIF-3"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":23,"start":1}],"match_end":23,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":19,"start":1}],"match_end":19,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2267424,"start_pos":2263888,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":18,"start":1}},{"range":{"end":272,"start":259}},{"range":{"end":364,"start":353}},{"range":{"end":863,"start":852}},{"range":{"end":925,"start":915}}],"name":"clu1","ortholog_annotations":[{"gene_uniquename":"SJAG_01741","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29094","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01741","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC530.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01741","ortholog_taxonid":4932,"ortholog_uniquename":"YMR012W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01741","ortholog_taxonid":4932,"ortholog_uniquename":"YMR012W","reference_uniquename":"PMID:26896847"}],"product":"clustered mitochondria ortholog Clu1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005737":null,"GO:0007005":null,"GO:0048312":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01741.1"],"transcripts_by_uniquename":{"SJAG_01741.1":null},"uniprot_identifier":"B6JYS3","uniquename":"SJAG_01741"}


id: SJAG_01742
data:
  {"cv_annotations":{"biological_process":[{"annotations":[59067],"is_not":false,"summary":null,"term":"GO:0006772"}],"cellular_component":[{"annotations":[111261],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111263],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[111265],"is_not":false,"summary":null,"term":"GO:0003824"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYS4","InterPro:IPR004305","EnsemblGenomes-Tr:EEB06692","EnsemblGenomes-Gn:SJAG_01742","InterPro:IPR016084"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"}],"genes_by_uniquename":{"SJAG_01742":null,"SPBC530.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TENA/THI-4/PQQC family","id":"PF03070","interpro_description":"Thiaminase-2/PQQC","interpro_id":"IPR004305","interpro_name":"Thiaminase-2/PQQC","locations":[{"end":110,"start":25}],"match_end":110,"match_start":25,"name":"TENA_THI-4"},{"dbname":"CDD","description":"TenA_E_At3g16990-like","id":"cd19357","locations":[{"end":235,"start":13}],"match_end":235,"match_start":13,"name":"TenA_E_At3g16990-like"},{"dbname":"SUPERFAMILY","id":"SSF48613","interpro_description":"Haem oxygenase-like, multi-helical","interpro_id":"IPR016084","interpro_name":"Haem_Oase-like_multi-hlx","locations":[{"end":236,"start":26}],"match_end":236,"match_start":26,"name":"Heme oxygenase-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.910.10","interpro_description":"Haem oxygenase-like, multi-helical","interpro_id":"IPR016084","interpro_name":"Haem_Oase-like_multi-hlx","locations":[{"end":238,"start":10}],"match_end":238,"match_start":10}],"location":{"chromosome_name":"supercont5.3","end_pos":2268939,"start_pos":2268223,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01742","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC530.07c","reference_uniquename":"PMID:26896847"}],"product":"TENA/THI family protein, domain found in context with a broad range of enzymes","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003824"]}},"subset_termids":["GO:0005829","GO:0006790","GO:0005634","GO:0006766"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003824":null,"GO:0005634":null,"GO:0005829":null,"GO:0006772":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01742.1"],"transcripts_by_uniquename":{"SJAG_01742.1":null},"uniprot_identifier":"B6JYS4","uniquename":"SJAG_01742"}


id: SJAG_01743
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[91717],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[91718],"is_not":false,"summary":null,"term":"GO:0003824"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06693","InterPro:IPR032633","InterPro:IPR029062","UniProtKB/TrEMBL:B6JYS5","EnsemblGenomes-Gn:SJAG_01743"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":108,"start":84}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"}],"genes_by_uniquename":{"SJAG_01743":null,"SPAC18G6.12c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ThiJ/PfpI family-like","id":"PF17124","interpro_description":"ThiJ/PfpI family-like","interpro_id":"IPR032633","interpro_name":"ThiJ-like","locations":[{"end":249,"start":48}],"match_end":249,"match_start":48,"name":"ThiJ_like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.880","interpro_description":"Class I glutamine amidotransferase-like","interpro_id":"IPR029062","interpro_name":"Class_I_gatase-like","locations":[{"end":298,"start":45}],"match_end":298,"match_start":45},{"dbname":"PANTHER","id":"PTHR43068","locations":[{"end":288,"start":30}],"match_end":288,"match_start":30,"name":"SLR1854 PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":108,"start":84}],"match_end":108,"match_start":84,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":98,"start":86}],"match_end":98,"match_start":86,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2271916,"start_pos":2270984,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01743","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18G6.12c","reference_uniquename":"PMID:21511999"}],"product":"ThiJ domain protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003824"]}},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003824":null,"GO:0005737":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01743.1"],"transcripts_by_uniquename":{"SJAG_01743.1":null},"uniprot_identifier":"B6JYS5","uniquename":"SJAG_01743"}


id: SJAG_01744
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71809],"is_not":false,"summary":null,"term":"GO:0006361"}],"cellular_component":[{"annotations":[91712],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71806],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[71807],"is_not":false,"summary":null,"term":"GO:0001042"},{"annotations":[71808],"is_not":false,"summary":null,"term":"GO:0001181"}]},"dbxrefs":["InterPro:IPR016024","InterPro:IPR007991","EnsemblGenomes-Gn:SJAG_01744","EnsemblGenomes-Tr:EEB06694","GOA:B6JYS6","UniProtKB/TrEMBL:B6JYS6"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":274,"start":249}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"prt1","uniquename":"SJAG_01740"},{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"}],"genes_by_uniquename":{"HGNC:30346":null,"SJAG_01744":null,"SPAC18G6.11c":null,"YKL125W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA polymerase I specific transcription initiation factor RRN3","id":"PF05327","interpro_description":"RNA polymerase I specific transcription initiation factor RRN3","interpro_id":"IPR007991","interpro_name":"RNA_pol_I_trans_ini_fac_RRN3","locations":[{"end":573,"start":47}],"match_end":573,"match_start":47,"name":"RRN3"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":272,"start":90}],"match_end":272,"match_start":90,"name":"ARM repeat"},{"dbname":"PANTHER","id":"PTHR12790","interpro_description":"RNA polymerase I specific transcription initiation factor RRN3","interpro_id":"IPR007991","interpro_name":"RNA_pol_I_trans_ini_fac_RRN3","locations":[{"end":586,"start":49}],"match_end":586,"match_start":49,"name":"TRANSCRIPTION INITIATION FACTOR IA  RRN3"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":274,"start":249}],"match_end":274,"match_start":249,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":266,"start":250}],"match_end":266,"match_start":250,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2274441,"start_pos":2272669,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":89,"start":77}},{"range":{"end":118,"start":103}},{"range":{"end":276,"start":243}},{"range":{"end":588,"start":575}}],"name":"rrn3","ortholog_annotations":[{"gene_uniquename":"SJAG_01744","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30346","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01744","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18G6.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01744","ortholog_taxonid":4932,"ortholog_uniquename":"YKL125W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01744","ortholog_taxonid":4932,"ortholog_uniquename":"YKL125W","reference_uniquename":"PMID:26896847"}],"product":"RNA polymerase I general transcription inititation factor subunit Rrn3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0001042"],"not-binding":["GO:0001181"]}},"subset_termids":["GO:0005829","GO:0006351","GO:0140223","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001042":null,"GO:0001181":null,"GO:0005634":null,"GO:0005829":null,"GO:0006361":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01744.1"],"transcripts_by_uniquename":{"SJAG_01744.1":null},"uniprot_identifier":"B6JYS6","uniquename":"SJAG_01744"}


id: SJAG_01745
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[91699],"is_not":false,"summary":null,"term":"GO:0140698"},{"annotations":[91700],"is_not":false,"summary":null,"term":"GO:0072766"},{"annotations":[91701],"is_not":false,"summary":null,"term":"GO:0070828"},{"annotations":[120009],"is_not":false,"summary":null,"term":"GO:0101024"},{"annotations":[91702],"is_not":false,"summary":null,"term":"GO:0007084"},{"annotations":[91703],"is_not":false,"summary":null,"term":"GO:0071765"},{"annotations":[91705],"is_not":false,"summary":null,"term":"GO:0140462"},{"annotations":[91706],"is_not":false,"summary":null,"term":"GO:0140464"}],"cellular_component":[{"annotations":[91687],"is_not":false,"summary":null,"term":"GO:0061638"},{"annotations":[91689],"is_not":false,"summary":null,"term":"GO:0099115"},{"annotations":[119621],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[91690],"is_not":false,"summary":null,"term":"GO:0140599"},{"annotations":[91692],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[78086],"is_not":false,"summary":null,"term":"GO:0005637"},{"annotations":[78085],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[91697],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[91698],"is_not":false,"summary":null,"term":"GO:0033553"},{"annotations":[119589],"is_not":false,"summary":null,"term":"GO:0005816"}],"molecular_function":[{"annotations":[91707],"is_not":false,"summary":null,"term":"GO:0140449"},{"annotations":[91708],"is_not":false,"summary":null,"term":"GO:0019237"},{"annotations":[66731],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[91711],"is_not":false,"summary":null,"term":"GO:0062239"}],"mondo":[{"annotations":[86351],"is_not":false,"summary":null,"term":"MONDO:0008925"},{"annotations":[86878],"is_not":false,"summary":null,"term":"MONDO:0859147"}],"single_locus_phenotype":[{"annotations":[120007],"is_not":false,"summary":null,"term":"FYPO:0003779"},{"annotations":[119632],"is_not":false,"summary":null,"term":"FYPO:0001375"},{"annotations":[119585,120008],"is_not":false,"summary":null,"term":"FYPO:0007772"},{"annotations":[119590],"is_not":false,"summary":null,"term":"FYPO:0003657"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06695","InterPro:IPR018996","InterPro:IPR025856","UniProtKB/TrEMBL:B6JYS7","EnsemblGenomes-Gn:SJAG_01745","GOA:B6JYS7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":140,"start":50}},{"range":{"end":223,"start":194}}],"feature_publications":[{"reference_uniquename":"PMID:21802294","source":"canto"},{"reference_uniquename":"PMID:32109380","source":"canto"},{"reference_uniquename":"PMID:32243490","source":"canto"},{"reference_uniquename":"PMID:28954740","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"clu1","uniquename":"SJAG_01741"},{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"}],"genes_by_uniquename":{"HGNC:21244":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null,"SPAC18G6.10":null,"YDR458C":null,"YML034W":null},"genetic_interactions":[[{"gene_a_uniquename":"SJAG_01745","gene_b_uniquename":"SJAG_01050","interaction_type":"Phenotypic Suppression"},[{"annotation_date":"2021-07-09","reference_uniquename":"PMID:32243490","source_database":"JaponicusDB","throughput":"low"}]],[{"gene_a_uniquename":"SJAG_05207","gene_b_uniquename":"SJAG_01745","interaction_type":"Phenotypic Suppression"},[{"annotation_date":"2021-07-09","reference_uniquename":"PMID:32243490","source_database":"JaponicusDB","throughput":"low"}]],[{"gene_a_uniquename":"SJAG_01242","gene_b_uniquename":"SJAG_01745","interaction_type":"Phenotypic Suppression"},[{"annotation_date":"2021-07-09","reference_uniquename":"PMID:32243490","source_database":"JaponicusDB","throughput":"low"}]]],"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"HeH/LEM domain","id":"PF12949","interpro_description":"HeH/LEM domain","interpro_id":"IPR025856","interpro_name":"HeH/LEM_domain","locations":[{"end":44,"start":10}],"match_end":44,"match_start":10,"name":"HeH"},{"dbname":"PFAM","description":"Man1-Src1p-C-terminal domain","id":"PF09402","interpro_description":"Man1/Src1-like, C-terminal","interpro_id":"IPR018996","interpro_name":"Man1/Src1-like_C","locations":[{"end":663,"start":326}],"match_end":663,"match_start":326,"name":"MSC"},{"dbname":"CDD","description":"LEM_like","id":"cd12935","locations":[{"end":44,"start":10}],"match_end":44,"match_start":10,"name":"LEM_like"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.1180","interpro_description":"MAN1, winged-helix domain","interpro_id":"IPR041885","interpro_name":"MAN1_winged_helix_dom","locations":[{"end":661,"start":560}],"match_end":661,"match_start":560},{"dbname":"PANTHER","id":"PTHR47808","interpro_description":"Heh2/Src1-like","interpro_id":"IPR044780","interpro_name":"Heh2/Src1","locations":[{"end":672,"start":1}],"match_end":672,"match_start":1,"name":"INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":140,"start":50},{"end":223,"start":194}],"match_end":223,"match_start":50,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":90,"start":76},{"end":211,"start":200}],"match_end":211,"match_start":76,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":133,"start":116}],"match_end":133,"match_start":116,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":72,"start":61}],"match_end":72,"match_start":61,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2276834,"start_pos":2274813,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":89,"start":75}},{"range":{"end":210,"start":199}},{"range":{"end":248,"start":238}},{"range":{"end":334,"start":320}},{"range":{"end":558,"start":545}}],"name":"lem2","ortholog_annotations":[{"gene_uniquename":"SJAG_01745","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21244","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01745","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18G6.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01745","ortholog_taxonid":4932,"ortholog_uniquename":"YDR458C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01745","ortholog_taxonid":4932,"ortholog_uniquename":"YDR458C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01745","ortholog_taxonid":4932,"ortholog_uniquename":"YML034W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01745","ortholog_taxonid":4932,"ortholog_uniquename":"YML034W","reference_uniquename":"PMID:26896847"}],"physical_interactions":[{"annotation_date":"2021-06-17","evidence":"Reconstituted Complex","gene_uniquename":"SJAG_05207","interactor_uniquename":"SJAG_01745","reference_uniquename":"PMID:32109380","source_database":"JaponicusDB","throughput":"low"}],"product":"LEM domain nuclear inner membrane protein Heh1/Lem2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:21802294":null,"PMID:26896847":null,"PMID:28954740":null,"PMID:29761456":null,"PMID:32109380":null,"PMID:32243490":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003682","GO:0019237"],"not-binding":["GO:0062239","GO:0140449"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0001375","FYPO:0003657","FYPO:0007772","FYPO:0003779"]}},"subset_termids":["GO:0005816","GO:0034399","GO:0006325","GO:0061024","GO:0005634","FYPO:0000138","FYPO:0001320","GO:0005694","GO:0060090","GO:0015630","FYPO:0002403","MONDO:0019303","MONDO:0005328"],"target_of_annotations":[{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_05207","genotype_uniquename":"cmp7delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true},{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_04489","genotype_uniquename":"did4delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true},{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_01050","genotype_uniquename":"nur1delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true},{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_03783","genotype_uniquename":"vps24delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true},{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_03892","genotype_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true},{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_03892","genotype_uniquename":"vps4delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true},{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Chromatin immunoprecipitation experiment","ext_rel_display_name":"affected by mutation in","gene":"SJAG_03892","genotype_uniquename":"vps4delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true},{"assigned_by":"JaponicusDB","date":"2021-06-17","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_03892","genotype_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:32109380","show_in_summary":true}],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001375":null,"FYPO:0003657":null,"FYPO:0003779":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000792":null,"GO:0003682":null,"GO:0005637":null,"GO:0005721":null,"GO:0005816":null,"GO:0007084":null,"GO:0019237":null,"GO:0033553":null,"GO:0034399":null,"GO:0044732":null,"GO:0061638":null,"GO:0062239":null,"GO:0070828":null,"GO:0071765":null,"GO:0072766":null,"GO:0099115":null,"GO:0101024":null,"GO:0140449":null,"GO:0140462":null,"GO:0140464":null,"GO:0140599":null,"GO:0140698":null,"MONDO:0008925":null,"MONDO:0859147":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":337,"start":315}},{"assigned_by":"TMHMM","range":{"end":561,"start":539}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01745.1"],"transcripts_by_uniquename":{"SJAG_01745.1":null},"uniprot_identifier":"B6JYS7","uniquename":"SJAG_01745"}


id: SJAG_01746
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91685],"is_not":false,"summary":null,"term":"GO:0110156"}],"cellular_component":[{"annotations":[91682],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91683],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[91684],"is_not":false,"summary":null,"term":"GO:0098745"}],"molecular_function":[{"annotations":[91686],"is_not":false,"summary":null,"term":"GO:0170008"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01746","EnsemblGenomes-Tr:EEB06696","UniProtKB/TrEMBL:B6JYS8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":130,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01742"},{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"}],"genes_by_uniquename":{"HGNC:17278":null,"HGNC:23158":null,"SJAG_01746":null,"SPAC18G6.09c":null,"YER035W":null,"YGL222C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Proline-rich nuclear receptor coactivator motif","id":"PF15365","interpro_description":"Proline-rich nuclear receptor coactivator-like, proline rich region","interpro_id":"IPR028322","interpro_name":"PNRC-like_rgn","locations":[{"end":151,"start":132}],"match_end":151,"match_start":132,"name":"PNRC"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":130,"start":1}],"match_end":130,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":129,"start":111}],"match_end":129,"match_start":111,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":82,"start":72}],"match_end":82,"match_start":72,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":59,"start":47}],"match_end":59,"match_start":47,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2277870,"start_pos":2277046,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":44,"start":38}},{"range":{"end":70,"start":59}},{"range":{"end":106,"start":95}},{"range":{"end":128,"start":109}}],"name":"edc1","ortholog_annotations":[{"gene_uniquename":"SJAG_01746","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17278","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01746","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23158","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01746","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18G6.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01746","ortholog_taxonid":4932,"ortholog_uniquename":"YER035W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01746","ortholog_taxonid":4932,"ortholog_uniquename":"YGL222C","reference_uniquename":"PMID:29761456"}],"product":"Dcp2-Dcp1 mRNA-decapping complex subunit Edc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0170008"]}},"subset_termids":["GO:0005829","GO:0098772","GO:0030234","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0098745":null,"GO:0110156":null,"GO:0170008":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01746.1"],"transcripts_by_uniquename":{"SJAG_01746.1":null},"uniprot_identifier":"B6JYS8","uniquename":"SJAG_01746"}


id: SJAG_01747
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79785],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[79784],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[79786],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06697","InterPro:IPR008978","InterPro:IPR037898","UniProtKB/TrEMBL:B6JYS9","EnsemblGenomes-Gn:SJAG_01747","InterPro:IPR007052"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05740"},{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"}],"genes_by_uniquename":{"HGNC:8045":null,"SJAG_01747":null,"SPBC19F8.02":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CS domain","id":"PF04969","interpro_description":"CS domain","interpro_id":"IPR007052","interpro_name":"CS_dom","locations":[{"end":91,"start":15}],"match_end":91,"match_start":15,"name":"CS"},{"dbname":"CDD","description":"p23_NUDC_like","id":"cd06467","locations":[{"end":102,"start":16}],"match_end":102,"match_start":16,"name":"p23_NUDC_like"},{"dbname":"PROSITE_PROFILES","description":"CS domain profile.","id":"PS51203","interpro_description":"CS domain","interpro_id":"IPR007052","interpro_name":"CS_dom","locations":[{"end":102,"start":11}],"match_end":102,"match_start":11,"name":"CS"},{"dbname":"FUNFAM","description":"Nuclear migration protein nudC","id":"G3DSA:2.60.40.790:FF:000001","locations":[{"end":136,"start":8}],"match_end":136,"match_start":8},{"dbname":"SUPERFAMILY","id":"SSF49764","interpro_description":"HSP20-like chaperone","interpro_id":"IPR008978","interpro_name":"HSP20-like_chaperone","locations":[{"end":116,"start":12}],"match_end":116,"match_start":12,"name":"HSP20-like chaperones"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.790","interpro_description":"HSP20-like chaperone","interpro_id":"IPR008978","interpro_name":"HSP20-like_chaperone","locations":[{"end":137,"start":12}],"match_end":137,"match_start":12},{"dbname":"PANTHER","id":"PTHR12356","interpro_description":"NudC family","interpro_id":"IPR037898","interpro_name":"NudC_fam","locations":[{"end":170,"start":15}],"match_end":170,"match_start":15,"name":"NUCLEAR MOVEMENT PROTEIN NUDC"}],"location":{"chromosome_name":"supercont5.3","end_pos":2280143,"start_pos":2279619,"strand":"forward"},"name":"nud3","ortholog_annotations":[{"gene_uniquename":"SJAG_01747","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8045","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01747","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19F8.02","reference_uniquename":"PMID:21511999"}],"product":"nuclear distribution protein NUDC homolog","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051082"]}},"subset_termids":["GO:0051082","GO:0006457","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0006457":null,"GO:0051082":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01747.1"],"transcripts_by_uniquename":{"SJAG_01747.1":null},"uniprot_identifier":"B6JYS9","uniquename":"SJAG_01747"}


id: SJAG_01748
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61675],"is_not":false,"summary":null,"term":"GO:0048268"},{"annotations":[74057],"is_not":false,"summary":null,"term":"GO:0072583"},{"annotations":[106402],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[74056],"is_not":false,"summary":null,"term":"GO:0006900"}],"cellular_component":[{"annotations":[106396],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[74054],"is_not":false,"summary":null,"term":"GO:0005905"},{"annotations":[74055],"is_not":false,"summary":null,"term":"GO:0030136"},{"annotations":[106399],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[74052],"is_not":false,"summary":null,"term":"GO:0005545"},{"annotations":[106405],"is_not":false,"summary":null,"term":"GO:0140312"},{"annotations":[74050],"is_not":false,"summary":null,"term":"GO:0032050"},{"annotations":[74053],"is_not":false,"summary":null,"term":"GO:0005546"},{"annotations":[74051],"is_not":false,"summary":null,"term":"GO:0000149"}],"mondo":[{"annotations":[87568],"is_not":false,"summary":null,"term":"MONDO:0018874"}]},"dbxrefs":["InterPro:IPR011417","EnsemblGenomes-Tr:EEB06698","GOA:B6JYT0","InterPro:IPR014712","InterPro:IPR013809","InterPro:IPR008942","EnsemblGenomes-Gn:SJAG_01748","UniProtKB/TrEMBL:B6JYT0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":328,"start":277}},{"range":{"end":440,"start":414}},{"range":{"end":556,"start":506}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01743"},{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"}],"genes_by_uniquename":{"HGNC:14986":null,"HGNC:15514":null,"SJAG_01748":null,"SPBC19F8.03c":null,"YGR241C":null,"YHR161C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ANTH domain","id":"PF07651","interpro_description":"AP180 N-terminal homology (ANTH) domain","interpro_id":"IPR011417","interpro_name":"ANTH_dom","locations":[{"end":265,"start":4}],"match_end":265,"match_start":4,"name":"ANTH"},{"dbname":"CDD","description":"ANTH_N_YAP180","id":"cd16988","locations":[{"end":117,"start":5}],"match_end":117,"match_start":5,"name":"ANTH_N_YAP180"},{"dbname":"PROSITE_PROFILES","description":"ENTH domain profile.","id":"PS50942","interpro_description":"ENTH domain","interpro_id":"IPR013809","interpro_name":"ENTH","locations":[{"end":124,"start":1}],"match_end":124,"match_start":1,"name":"ENTH"},{"dbname":"SMART","id":"SM00273","interpro_description":"ENTH domain","interpro_id":"IPR013809","interpro_name":"ENTH","locations":[{"end":124,"start":3}],"match_end":124,"match_start":3,"name":"enth_2"},{"dbname":"FUNFAM","description":"ENTH domain protein","id":"G3DSA:1.20.58.150:FF:000004","locations":[{"end":279,"start":128}],"match_end":279,"match_start":128},{"dbname":"SUPERFAMILY","id":"SSF89009","locations":[{"end":262,"start":134}],"match_end":262,"match_start":134,"name":"GAT-like domain"},{"dbname":"SUPERFAMILY","id":"SSF48464","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":126,"start":4}],"match_end":126,"match_start":4,"name":"ENTH/VHS domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.150","interpro_description":"ANTH domain superfamily","interpro_id":"IPR014712","interpro_name":"ANTH_dom_sf","locations":[{"end":281,"start":126}],"match_end":281,"match_start":126,"name":"ANTH domain"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.90","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":125,"start":1}],"match_end":125,"match_start":1},{"dbname":"PANTHER","id":"PTHR22951","interpro_description":"Clathrin coat assembly protein AP180-like","interpro_id":"IPR045192","interpro_name":"AP180-like","locations":[{"end":400,"start":2}],"match_end":400,"match_start":2,"name":"CLATHRIN ASSEMBLY PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":328,"start":277},{"end":440,"start":414},{"end":556,"start":506}],"match_end":556,"match_start":277,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":436,"start":423}],"match_end":436,"match_start":423,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2282229,"start_pos":2280457,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":315,"start":304}},{"range":{"end":399,"start":385}},{"range":{"end":456,"start":416}}],"name":"yap18","ortholog_annotations":[{"gene_uniquename":"SJAG_01748","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14986","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01748","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15514","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01748","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19F8.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01748","ortholog_taxonid":4932,"ortholog_uniquename":"YGR241C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01748","ortholog_taxonid":4932,"ortholog_uniquename":"YGR241C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01748","ortholog_taxonid":4932,"ortholog_uniquename":"YHR161C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01748","ortholog_taxonid":4932,"ortholog_uniquename":"YHR161C","reference_uniquename":"PMID:26896847"}],"product":"endocytic adaptor, ENTH/VHS domain Yap18","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005545","GO:0000149","GO:0005546","GO:0032050"],"not-binding":["GO:0140312"]}},"subset_termids":["GO:0060090","MONDO:0005570","GO:0005829","GO:0030479","GO:0065003","GO:0008289","GO:0016192","MONDO:0005046","MONDO:0004992","GO:0061024","GO:0031410","GO:0015629","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000149":null,"GO:0005545":null,"GO:0005546":null,"GO:0005829":null,"GO:0005905":null,"GO:0006886":null,"GO:0006900":null,"GO:0030136":null,"GO:0030479":null,"GO:0032050":null,"GO:0048268":null,"GO:0072583":null,"GO:0140312":null,"MONDO:0018874":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01748.1"],"transcripts_by_uniquename":{"SJAG_01748.1":null},"uniprot_identifier":"B6JYT0","uniquename":"SJAG_01748"}


id: SJAG_01749
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":106,"start":106}},{"assigned_by":"UniProtKB","range":{"end":114,"start":114}},{"assigned_by":"UniProtKB","range":{"end":154,"start":154}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Ca(2+)","range":{"end":111,"start":111}}],"chains":[{"assigned_by":"UniProtKB","range":{"end":233,"start":1}}],"cv_annotations":{"cellular_component":[{"annotations":[106407],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[106408],"is_not":false,"summary":null,"term":"GO:0004518"}]},"dbxrefs":["UniProtKB/Swiss-Prot:B6JYT1","EnsemblGenomes-Gn:SJAG_01749","InterPro:IPR016071","EnsemblGenomes-Tr:EEB06699","GOA:B6JYT1","InterPro:IPR035437"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrn3","uniquename":"SJAG_01744"},{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"}],"genes_by_uniquename":{"HGNC:26434":null,"SJAG_01749":null,"SPBC19F8.04c":null,"YGL085W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Staphylococcal nuclease homologue","id":"PF00565","interpro_description":"Staphylococcal nuclease (SNase-like), OB-fold","interpro_id":"IPR016071","interpro_name":"Staphylococal_nuclease_OB-fold","locations":[{"end":215,"start":105}],"match_end":215,"match_start":105,"name":"SNase"},{"dbname":"PROSITE_PROFILES","description":"Thermonuclease domain profile.","id":"PS50830","interpro_description":"Staphylococcal nuclease (SNase-like), OB-fold","interpro_id":"IPR016071","interpro_name":"Staphylococal_nuclease_OB-fold","locations":[{"end":218,"start":57}],"match_end":218,"match_start":57,"name":"TNASE_3"},{"dbname":"SMART","id":"SM00318","interpro_description":"Staphylococcal nuclease (SNase-like), OB-fold","interpro_id":"IPR016071","interpro_name":"Staphylococal_nuclease_OB-fold","locations":[{"end":218,"start":57}],"match_end":218,"match_start":57,"name":"SNASE_2"},{"dbname":"SUPERFAMILY","id":"SSF50199","interpro_description":"SNase-like, OB-fold superfamily","interpro_id":"IPR035437","interpro_name":"SNase_OB-fold_sf","locations":[{"end":220,"start":55}],"match_end":220,"match_start":55,"name":"Staphylococcal nuclease"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.90","interpro_description":"SNase-like, OB-fold superfamily","interpro_id":"IPR035437","interpro_name":"SNase_OB-fold_sf","locations":[{"end":215,"start":44}],"match_end":215,"match_start":44},{"dbname":"PANTHER","id":"PTHR12302","locations":[{"end":232,"start":104}],"match_end":232,"match_start":104,"name":"EBNA2 BINDING PROTEIN P100"}],"location":{"chromosome_name":"supercont5.3","end_pos":2283095,"start_pos":2282394,"strand":"reverse"},"name":"lcl3","ortholog_annotations":[{"gene_uniquename":"SJAG_01749","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26434","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01749","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19F8.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01749","ortholog_taxonid":4932,"ortholog_uniquename":"YGL085W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01749","ortholog_taxonid":4932,"ortholog_uniquename":"YGL085W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial protein Lcl3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004518"]}},"subset_termids":["GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004518":null,"GO:0005739":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":29,"start":10}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01749.1"],"transcripts_by_uniquename":{"SJAG_01749.1":null},"uniprot_identifier":"B6JYT1","uniquename":"SJAG_01749"}


id: SJAG_01750
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112950],"is_not":false,"summary":null,"term":"GO:0045047"},{"annotations":[66055],"is_not":false,"summary":null,"term":"GO:0006465"}],"cellular_component":[{"annotations":[66056],"is_not":false,"summary":null,"term":"GO:0005787"}]},"dbxrefs":["GOA:B6JYT2","InterPro:IPR009542","InterPro:IPR037713","UniProtKB/TrEMBL:B6JYT2","EnsemblGenomes-Gn:SJAG_01750","EnsemblGenomes-Tr:EEB06700"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lem2","uniquename":"SJAG_01745"},{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"}],"genes_by_uniquename":{"HGNC:23401":null,"SJAG_01750":null,"SPBC887.22":null,"YJR010C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Microsomal signal peptidase 12 kDa subunit (SPC12)","id":"PF06645","interpro_description":"Signal peptidase complex subunit 1","interpro_id":"IPR009542","interpro_name":"Spc1/SPCS1","locations":[{"end":96,"start":28}],"match_end":96,"match_start":28,"name":"SPC12"}],"location":{"chromosome_name":"supercont5.3","end_pos":2284381,"start_pos":2283936,"strand":"reverse"},"name":"spc1","ortholog_annotations":[{"gene_uniquename":"SJAG_01750","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23401","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01750","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.22","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01750","ortholog_taxonid":4932,"ortholog_uniquename":"YJR010C-A","reference_uniquename":"PMID:29761456"}],"product":"signal peptidase complex subunit Spc1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006605","GO:0005789","GO:0051604","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005787":null,"GO:0006465":null,"GO:0045047":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":56,"start":34}},{"assigned_by":"TMHMM","range":{"end":85,"start":63}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01750.1"],"transcripts_by_uniquename":{"SJAG_01750.1":null},"uniprot_identifier":"B6JYT2","uniquename":"SJAG_01750"}


id: SJAG_01752
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116944],"is_not":false,"summary":null,"term":"GO:0042273"}],"cellular_component":[{"annotations":[116942],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[116945],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR016095","EnsemblGenomes-Gn:SJAG_01752","InterPro:IPR028364","EnsemblGenomes-Tr:EEB06701","InterPro:IPR023674","UniProtKB/TrEMBL:B6JYT3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"edc1","uniquename":"SJAG_01746"},{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"}],"genes_by_uniquename":{"HGNC:24534":null,"SJAG_01752":null,"SPCC306.07c":null,"YHR052W":null,"YKR060W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L1p/L10e family","id":"PF00687","interpro_description":"Ribosomal protein uL1/ribosomal biogenesis protein","interpro_id":"IPR028364","interpro_name":"Ribosomal_uL1/biogenesis","locations":[{"end":235,"start":34}],"match_end":235,"match_start":34,"name":"Ribosomal_L1"},{"dbname":"CDD","description":"Ribosomal_L1","id":"cd00403","interpro_description":"Ribosomal protein uL1/ribosomal biogenesis protein","interpro_id":"IPR028364","interpro_name":"Ribosomal_uL1/biogenesis","locations":[{"end":240,"start":23}],"match_end":240,"match_start":23,"name":"Ribosomal_L1"},{"dbname":"SUPERFAMILY","id":"SSF56808","interpro_description":"Ribosomal protein uL1-like","interpro_id":"IPR023674","interpro_name":"Ribosomal_uL1-like","locations":[{"end":241,"start":25}],"match_end":241,"match_start":25,"name":"Ribosomal protein L1"},{"dbname":"GENE3D","id":"G3DSA:3.30.190.20","locations":[{"end":75,"start":58},{"end":233,"start":177}],"match_end":233,"match_start":58},{"dbname":"GENE3D","id":"G3DSA:3.40.50.790","interpro_description":"Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain","interpro_id":"IPR016095","interpro_name":"Ribosomal_uL1_3-a/b-sand","locations":[{"end":176,"start":76}],"match_end":176,"match_start":76}],"location":{"chromosome_name":"supercont5.3","end_pos":2287159,"start_pos":2286266,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":13,"start":5}},{"range":{"end":276,"start":259}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01752","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24534","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01752","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC306.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01752","ortholog_taxonid":4932,"ortholog_uniquename":"YHR052W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01752","ortholog_taxonid":4932,"ortholog_uniquename":"YKR060W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01752","ortholog_taxonid":4932,"ortholog_uniquename":"YKR060W","reference_uniquename":"PMID:26896847"}],"product":"U3 snoRNP-associated protein Cic1/Utp30 family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0042254","GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005730":null,"GO:0042273":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01752.1"],"transcripts_by_uniquename":{"SJAG_01752.1":null},"uniprot_identifier":"B6JYT3","uniquename":"SJAG_01752"}


id: SJAG_01753
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":208,"start":208}}],"alleles_by_uniquename":{"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"}},"binding_sites":[{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":44,"start":38}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":64,"start":64}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":112,"start":112}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":118,"start":118}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":125,"start":125}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":150,"start":148}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":150,"start":150}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":184,"start":184}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":257,"start":257}}],"cv_annotations":{"biological_process":[{"annotations":[62244],"is_not":false,"summary":null,"term":"GO:0006108"},{"annotations":[116949],"is_not":false,"summary":null,"term":"GO:0043490"},{"annotations":[74529],"is_not":false,"summary":null,"term":"GO:0006099"}],"cellular_component":[{"annotations":[116946],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[74528],"is_not":false,"summary":null,"term":"GO:0030060"}],"mondo":[{"annotations":[87224],"is_not":false,"summary":null,"term":"MONDO:0015025"}],"single_locus_phenotype":[{"annotations":[119513],"is_not":false,"summary":null,"term":"FYPO:0002058"}]},"dbxrefs":["InterPro:IPR015955","InterPro:IPR001236","InterPro:IPR022383","InterPro:IPR010097","EnsemblGenomes-Tr:EEB06702","UniProtKB/TrEMBL:B6JYT4","InterPro:IPR036291","EnsemblGenomes-Gn:SJAG_01753","InterPro:IPR001252","InterPro:IPR001557","GOA:B6JYT4"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:37164017","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nud3","uniquename":"SJAG_01747"},{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"}],"genes_by_uniquename":{"HGNC:6971":null,"SJAG_01753":null,"SPCC306.08c":null,"YKL085W":null},"genotypes_by_uniquename":{"mdh1delta":{"display_name":"mdh1delta","display_uniquename":"mdh1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01753:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"lactate/malate dehydrogenase, NAD binding domain","id":"PF00056","interpro_description":"Lactate/malate dehydrogenase, N-terminal","interpro_id":"IPR001236","interpro_name":"Lactate/malate_DH_N","locations":[{"end":162,"start":33}],"match_end":162,"match_start":33,"name":"Ldh_1_N"},{"dbname":"PFAM","description":"lactate/malate dehydrogenase, alpha/beta C-terminal domain","id":"PF02866","interpro_description":"Lactate/malate dehydrogenase, C-terminal","interpro_id":"IPR022383","interpro_name":"Lactate/malate_DH_C","locations":[{"end":342,"start":178}],"match_end":342,"match_start":178,"name":"Ldh_1_C"},{"dbname":"CDD","description":"MDH_glyoxysomal_mitochondrial","id":"cd01337","interpro_description":"Malate dehydrogenase, type 1","interpro_id":"IPR010097","interpro_name":"Malate_DH_type1","locations":[{"end":343,"start":32}],"match_end":343,"match_start":32,"name":"MDH_glyoxysomal_mitochondrial"},{"dbname":"PROSITE_PATTERNS","description":"Malate dehydrogenase active site signature.","id":"PS00068","interpro_description":"Malate dehydrogenase, active site","interpro_id":"IPR001252","interpro_name":"Malate_DH_AS","locations":[{"end":189,"start":177}],"match_end":189,"match_start":177,"name":"MDH"},{"dbname":"FUNFAM","description":"Malate dehydrogenase","id":"G3DSA:3.40.50.720:FF:000013","locations":[{"end":177,"start":30}],"match_end":177,"match_start":30},{"dbname":"FUNFAM","description":"Malate dehydrogenase","id":"G3DSA:3.90.110.10:FF:000001","locations":[{"end":344,"start":178}],"match_end":344,"match_start":178},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":169,"start":21}],"match_end":169,"match_start":21,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"SUPERFAMILY","id":"SSF56327","interpro_description":"Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal","interpro_id":"IPR015955","interpro_name":"Lactate_DH/Glyco_Ohase_4_C","locations":[{"end":343,"start":177}],"match_end":343,"match_start":177,"name":"LDH C-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.90.110.10","interpro_description":"Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal","interpro_id":"IPR015955","interpro_name":"Lactate_DH/Glyco_Ohase_4_C","locations":[{"end":344,"start":178}],"match_end":344,"match_start":178},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":177,"start":30}],"match_end":177,"match_start":30},{"dbname":"PANTHER","id":"PTHR11540","locations":[{"end":343,"start":21}],"match_end":343,"match_start":21,"name":"MALATE AND LACTATE DEHYDROGENASE"},{"dbname":"PIRSF","id":"PIRSF000102","interpro_description":"L-lactate/malate dehydrogenase","interpro_id":"IPR001557","interpro_name":"L-lactate/malate_DH","locations":[{"end":343,"start":28}],"match_end":343,"match_start":28,"name":"Lac_mal_DH"},{"dbname":"NCBIFAM","description":"malate dehydrogenase","id":"TIGR01772","interpro_description":"Malate dehydrogenase, type 1","interpro_id":"IPR010097","interpro_name":"Malate_DH_type1","locations":[{"end":343,"start":33}],"match_end":343,"match_start":33,"name":"MDH_euk_gproteo"}],"location":{"chromosome_name":"supercont5.3","end_pos":2288790,"start_pos":2287756,"strand":"reverse"},"name":"mdh1","ortholog_annotations":[{"gene_uniquename":"SJAG_01753","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6971","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01753","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC306.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01753","ortholog_taxonid":4932,"ortholog_uniquename":"YKL085W","reference_uniquename":"PMID:29761456"}],"product":"malate dehydrogenase Mdh1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:37164017":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0030060"]},"single_locus_phenotype":{"population_phenotype":["FYPO:0002058"]}},"subset_termids":["GO:0005739","FYPO:0002058","MONDO:0005027","MONDO:0700092","GO:0055086","GO:0016491","GO:0006091"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0002058":null,"GO:0005759":null,"GO:0006099":null,"GO:0006108":null,"GO:0030060":null,"GO:0043490":null,"MONDO:0015025":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01753.1"],"transcripts_by_uniquename":{"SJAG_01753.1":null},"uniprot_identifier":"B6JYT4","uniquename":"SJAG_01753"}


id: SJAG_01754
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116955],"is_not":false,"summary":null,"term":"GO:0010619"},{"annotations":[116956],"is_not":false,"summary":null,"term":"GO:0031138"}],"cellular_component":[{"annotations":[70668],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[116953],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[116954],"is_not":false,"summary":null,"term":"GO:0035838"}],"molecular_function":[{"annotations":[70669],"is_not":false,"summary":null,"term":"GO:0003779"},{"annotations":[70667],"is_not":false,"summary":null,"term":"GO:0008179"}],"mondo":[{"annotations":[86732],"is_not":false,"summary":null,"term":"MONDO:0957545"}]},"dbxrefs":["InterPro:IPR013992","InterPro:IPR018106","InterPro:IPR036222","InterPro:IPR036223","EnsemblGenomes-Gn:SJAG_01754","UniProtKB/TrEMBL:B6JYT5","InterPro:IPR001837","GOA:B6JYT5","EnsemblGenomes-Tr:EEB06703","InterPro:IPR013912","InterPro:IPR016098","InterPro:IPR017901","InterPro:IPR028419","InterPro:IPR006599"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":77,"start":35}},{"range":{"end":309,"start":266}},{"range":{"end":374,"start":333}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"yap18","uniquename":"SJAG_01748"},{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"}],"genes_by_uniquename":{"HGNC:20039":null,"HGNC:20040":null,"SJAG_01754":null,"SPCC306.09c":null,"YNL138W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Adenylate cyclase associated (CAP) C terminal","id":"PF08603","interpro_description":"Adenylate cyclase-associated CAP, C-terminal","interpro_id":"IPR013912","interpro_name":"Adenylate_cyclase-assoc_CAP_C","locations":[{"end":527,"start":371}],"match_end":527,"match_start":371,"name":"CAP_C"},{"dbname":"PFAM","description":"CAP N-terminal conserved motif","id":"PF01213","interpro_description":"Adenylate cyclase-associated CAP, N-terminal","interpro_id":"IPR013992","interpro_name":"Adenylate_cyclase-assoc_CAP_N","locations":[{"end":62,"start":15}],"match_end":62,"match_start":15,"name":"CAP_N-CM"},{"dbname":"PFAM","description":"CAP, N-terminal domain","id":"PF21938","interpro_description":"CAP, N-terminal domain","interpro_id":"IPR053950","interpro_name":"CAP_N","locations":[{"end":244,"start":84}],"match_end":244,"match_start":84,"name":"CAP_N"},{"dbname":"PROSITE_PATTERNS","description":"CAP protein signature 1.","id":"PS01088","interpro_description":"CAP, conserved site, N-terminal","interpro_id":"IPR018106","interpro_name":"CAP_CS_N","locations":[{"end":29,"start":17}],"match_end":29,"match_start":17,"name":"CAP_1"},{"dbname":"PROSITE_PROFILES","description":"C-CAP/cofactor C-like domain profile.","id":"PS51329","interpro_description":"C-CAP/cofactor C-like domain","interpro_id":"IPR017901","interpro_name":"C-CAP_CF_C-like","locations":[{"end":514,"start":369}],"match_end":514,"match_start":369,"name":"C_CAP_COFACTOR_C"},{"dbname":"SMART","id":"SM00673","interpro_description":"CARP motif","interpro_id":"IPR006599","interpro_name":"CARP_motif","locations":[{"end":484,"start":409}],"match_end":484,"match_start":409,"name":"carp"},{"dbname":"FUNFAM","description":"Adenylyl cyclase-associated protein","id":"G3DSA:1.25.40.330:FF:000001","locations":[{"end":251,"start":80}],"match_end":251,"match_start":80},{"dbname":"SUPERFAMILY","id":"SSF101278","interpro_description":"Adenylate cyclase-associated CAP, N-terminal domain superfamily","interpro_id":"IPR036222","interpro_name":"CAP_N_sf","locations":[{"end":247,"start":80},{"end":288,"start":280}],"match_end":288,"match_start":80,"name":"N-terminal domain of adenylylcyclase associated protein, CAP"},{"dbname":"SUPERFAMILY","id":"SSF69340","interpro_description":"Adenylate cyclase-associated CAP, C-terminal superfamily","interpro_id":"IPR036223","interpro_name":"CAP_C_sf","locations":[{"end":527,"start":372}],"match_end":527,"match_start":372,"name":"C-terminal domain of adenylylcyclase associated protein"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.330","interpro_description":"Adenylate cyclase-associated CAP, N-terminal domain superfamily","interpro_id":"IPR036222","interpro_name":"CAP_N_sf","locations":[{"end":251,"start":80}],"match_end":251,"match_start":80},{"dbname":"GENE3D","id":"G3DSA:2.160.20.70","interpro_description":"Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal","interpro_id":"IPR016098","interpro_name":"CAP/MinC_C","locations":[{"end":526,"start":367}],"match_end":526,"match_start":367},{"dbname":"PANTHER","id":"PTHR10652","interpro_description":"Adenylate cyclase-associated CAP","interpro_id":"IPR001837","interpro_name":"Adenylate_cyclase-assoc_CAP","locations":[{"end":527,"start":16}],"match_end":527,"match_start":16,"name":"ADENYLYL CYCLASE-ASSOCIATED PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":77,"start":35},{"end":309,"start":266},{"end":374,"start":333}],"match_end":374,"match_start":35,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":278,"start":269}],"match_end":278,"match_start":269,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":55,"start":38}],"match_end":55,"match_start":38,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":344,"start":333}],"match_end":344,"match_start":333,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":288,"start":279},{"end":354,"start":345}],"match_end":354,"match_start":279,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2292063,"start_pos":2290327,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":263,"start":246}},{"range":{"end":287,"start":268}},{"range":{"end":355,"start":345}},{"range":{"end":372,"start":361}}],"name":"cap1","ortholog_annotations":[{"gene_uniquename":"SJAG_01754","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20039","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01754","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20040","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01754","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC306.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01754","ortholog_taxonid":4932,"ortholog_uniquename":"YNL138W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01754","ortholog_taxonid":4932,"ortholog_uniquename":"YNL138W","reference_uniquename":"PMID:26896847"}],"product":"adenylyl cyclase-associated protein Cap1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003779","GO:0008179"]}},"subset_termids":["GO:0023052","GO:0000747","GO:0000935","MONDO:0005267","GO:0003779"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000935":null,"GO:0003779":null,"GO:0005737":null,"GO:0008179":null,"GO:0010619":null,"GO:0031138":null,"GO:0035838":null,"MONDO:0957545":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01754.1"],"transcripts_by_uniquename":{"SJAG_01754.1":null},"uniprot_identifier":"B6JYT5","uniquename":"SJAG_01754"}


id: SJAG_01755
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":246,"start":17}}],"cv_annotations":{"cellular_component":[{"annotations":[116957],"is_not":false,"summary":null,"term":"GO:0070263"}],"sequence":[{"annotations":[81021],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01755","UniProtKB/TrEMBL:B6JYT6","EnsemblGenomes-Tr:EEB06704"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lcl3","uniquename":"SJAG_01749"},{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"}],"genes_by_uniquename":{"SJAG_01755":null,"SPCC306.11":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":2293687,"start_pos":2292947,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01755","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC306.11","reference_uniquename":"PMID:21511999"}],"product":"cell surface membrane anchored protein, probably carbohydrate binding domain","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":16,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0009986","GO:0005618"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0070263":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01755.1"],"transcripts_by_uniquename":{"SJAG_01755.1":null},"uniprot_identifier":"B6JYT6","uniquename":"SJAG_01755"}


id: SJAG_01756
data:
  {"cv_annotations":{"biological_process":[{"annotations":[117581],"is_not":false,"summary":null,"term":"GO:0031122"},{"annotations":[117582],"is_not":false,"summary":null,"term":"GO:1990735"},{"annotations":[117583],"is_not":false,"summary":null,"term":"GO:0051321"},{"annotations":[117584],"is_not":false,"summary":null,"term":"GO:0051415"},{"annotations":[117585],"is_not":false,"summary":null,"term":"GO:0000278"},{"annotations":[117586],"is_not":false,"summary":null,"term":"GO:0051225"}],"cellular_component":[{"annotations":[117578],"is_not":false,"summary":null,"term":"GO:0000923"},{"annotations":[117579],"is_not":false,"summary":null,"term":"GO:0000931"},{"annotations":[117580],"is_not":false,"summary":null,"term":"GO:0044732"}],"molecular_function":[{"annotations":[117587],"is_not":false,"summary":null,"term":"GO:0140490"}],"mondo":[{"annotations":[87615],"is_not":false,"summary":null,"term":"MONDO:0009624"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01756","EnsemblGenomes-Tr:EEB06705","UniProtKB/TrEMBL:B6JYT7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spc1","uniquename":"SJAG_01750"},{"uniquename":"SJAG_01752"},{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"}],"genes_by_uniquename":{"HGNC:18127":null,"SJAG_01756":null,"SPCC4G3.19":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":2296282,"start_pos":2294084,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":166,"start":154}},{"range":{"end":297,"start":279}},{"range":{"end":325,"start":316}}],"name":"alp16","ortholog_annotations":[{"gene_uniquename":"SJAG_01756","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18127","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01756","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC4G3.19","reference_uniquename":"PMID:21511999"}],"product":"gamma tubulin complex GCP6 subunit Alp16","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140490"]}},"subset_termids":["GO:0000226","MONDO:0005328","MONDO:0700092","GO:0015630","GO:0065003","GO:0005816"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000278":null,"GO:0000923":null,"GO:0000931":null,"GO:0031122":null,"GO:0044732":null,"GO:0051225":null,"GO:0051321":null,"GO:0051415":null,"GO:0140490":null,"GO:1990735":null,"MONDO:0009624":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01756.1"],"transcripts_by_uniquename":{"SJAG_01756.1":null},"uniprot_identifier":"B6JYT7","uniquename":"SJAG_01756"}


id: SJAG_01757
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01757","EnsemblGenomes-Tr:EEB06706","UniProtKB/TrEMBL:B6JYT8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":69,"start":48}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mdh1","uniquename":"SJAG_01753"},{"name":"cap1","uniquename":"SJAG_01754"},{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"}],"genes_by_uniquename":{"SJAG_01757":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":69,"start":48}],"match_end":69,"match_start":48,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2301095,"start_pos":2300775,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":29,"start":17}},{"range":{"end":80,"start":69}}],"product":"Schizosaccharomyces japonicus specific protein family, in between Wcy","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":34,"start":12}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01757.1"],"transcripts_by_uniquename":{"SJAG_01757.1":null},"uniprot_identifier":"B6JYT8","uniquename":"SJAG_01757"}


id: SJAG_01759
data:
  {"coiled_coil_coords":[{"range":{"end":424,"start":404}},{"range":{"end":453,"start":433}}],"cv_annotations":{"biological_process":[{"annotations":[115521],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[115522],"is_not":false,"summary":null,"term":"GO:0006617"}],"cellular_component":[{"annotations":[115519],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72822],"is_not":false,"summary":null,"term":"GO:0005786"}],"molecular_function":[{"annotations":[60165],"is_not":false,"summary":null,"term":"GO:0008312"},{"annotations":[60164],"is_not":false,"summary":null,"term":"GO:0030942"},{"annotations":[72820],"is_not":false,"summary":null,"term":"GO:0005047"}],"mondo":[{"annotations":[86597],"is_not":false,"summary":null,"term":"MONDO:0957809"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06707","EnsemblGenomes-Gn:SJAG_01759","UniProtKB/TrEMBL:B6JYT9","InterPro:IPR026258","InterPro:IPR038253","GOA:B6JYT9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":542,"start":518}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01755"},{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"}],"genes_by_uniquename":{"HGNC:11302":null,"SJAG_01759":null,"SPCC1682.05c":null,"YPL243W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA-binding signal recognition particle 68","id":"PF16969","interpro_description":"Signal recognition particle subunit SRP68","interpro_id":"IPR026258","interpro_name":"SRP68","locations":[{"end":511,"start":25}],"match_end":511,"match_start":25,"name":"SRP68"},{"dbname":"GENE3D","id":"G3DSA:1.10.3450.40","interpro_description":"SRP68, N-terminal domain superfamily","interpro_id":"IPR038253","interpro_name":"SRP68_N_sf","locations":[{"end":201,"start":9}],"match_end":201,"match_start":9},{"dbname":"PANTHER","id":"PTHR12860","interpro_description":"Signal recognition particle subunit SRP68","interpro_id":"IPR026258","interpro_name":"SRP68","locations":[{"end":549,"start":7}],"match_end":549,"match_start":7,"name":"SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN"},{"dbname":"PIRSF","id":"PIRSF038995","interpro_description":"Signal recognition particle subunit SRP68","interpro_id":"IPR026258","interpro_name":"SRP68","locations":[{"end":550,"start":10}],"match_end":550,"match_start":10,"name":"SRP68"},{"dbname":"COILS","id":"Coil","locations":[{"end":424,"start":404},{"end":453,"start":433}],"match_end":453,"match_start":404,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":542,"start":518}],"match_end":542,"match_start":518,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2307666,"start_pos":2305903,"strand":"forward"},"name":"srp68","ortholog_annotations":[{"gene_uniquename":"SJAG_01759","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11302","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01759","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1682.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01759","ortholog_taxonid":4932,"ortholog_uniquename":"YPL243W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01759","ortholog_taxonid":4932,"ortholog_uniquename":"YPL243W","reference_uniquename":"PMID:26896847"}],"product":"signal recognition particle subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008312","GO:0005047","GO:0030942"]}},"subset_termids":["MONDO:0005046","GO:0065003","GO:0006605","MONDO:0005570","GO:0005048","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005047":null,"GO:0005786":null,"GO:0005829":null,"GO:0006617":null,"GO:0006886":null,"GO:0008312":null,"GO:0030942":null,"MONDO:0957809":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01759.1"],"transcripts_by_uniquename":{"SJAG_01759.1":null},"uniprot_identifier":"B6JYT9","uniquename":"SJAG_01759"}


id: SJAG_01760
data:
  {"coiled_coil_coords":[{"range":{"end":149,"start":129}}],"cv_annotations":{"biological_process":[{"annotations":[115515],"is_not":false,"summary":null,"term":"GO:1990395"},{"annotations":[115516],"is_not":false,"summary":null,"term":"GO:1903087"},{"annotations":[115517],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[115510],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[115511],"is_not":false,"summary":null,"term":"GO:0061496"},{"annotations":[115512],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[115514],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74398],"is_not":false,"summary":null,"term":"GO:0005509"},{"annotations":[74399],"is_not":false,"summary":null,"term":"GO:0008017"}]},"dbxrefs":["GOA:B6JYU0","InterPro:IPR018247","EnsemblGenomes-Tr:EEB06708","InterPro:IPR011992","InterPro:IPR002048","UniProtKB/TrEMBL:B6JYU0","EnsemblGenomes-Gn:SJAG_01760"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alp16","uniquename":"SJAG_01756"},{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"}],"genes_by_uniquename":{"HGNC:1866":null,"HGNC:1867":null,"HGNC:1868":null,"SJAG_01760":null,"SPCC1682.04":null,"YOR257W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"EF-hand domain pair","id":"PF13499","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":100,"start":37},{"end":173,"start":110}],"match_end":173,"match_start":37,"name":"EF-hand_7"},{"dbname":"CDD","description":"EFh","id":"cd00051","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":173,"start":111}],"match_end":173,"match_start":111,"name":"EFh"},{"dbname":"PROSITE_PATTERNS","description":"EF-hand calcium-binding domain.","id":"PS00018","interpro_description":"EF-Hand 1, calcium-binding site","interpro_id":"IPR018247","interpro_name":"EF_Hand_1_Ca_BS","locations":[{"end":59,"start":47},{"end":168,"start":156}],"match_end":168,"match_start":47,"name":"EF_HAND_1"},{"dbname":"PROSITE_PROFILES","description":"EF-hand calcium-binding domain profile.","id":"PS50222","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":105,"start":34},{"end":176,"start":107}],"match_end":176,"match_start":34,"name":"EF_HAND_2"},{"dbname":"SMART","id":"SM00054","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":66,"start":38},{"end":102,"start":74},{"end":139,"start":111},{"end":175,"start":147}],"match_end":175,"match_start":38,"name":"efh_1"},{"dbname":"FUNFAM","description":"Centrin 1","id":"G3DSA:1.10.238.10:FF:000077","locations":[{"end":176,"start":96}],"match_end":176,"match_start":96},{"dbname":"SUPERFAMILY","id":"SSF47473","interpro_description":"EF-hand domain pair","interpro_id":"IPR011992","interpro_name":"EF-hand-dom_pair","locations":[{"end":174,"start":23}],"match_end":174,"match_start":23,"name":"EF-hand"},{"dbname":"GENE3D","id":"G3DSA:1.10.238.10","locations":[{"end":176,"start":3}],"match_end":176,"match_start":3},{"dbname":"PANTHER","id":"PTHR23048","interpro_description":"Calmodulin/Myosin light chain/Troponin C-like","interpro_id":"IPR050230","interpro_name":"CALM/Myosin/TropC-like","locations":[{"end":174,"start":29}],"match_end":174,"match_start":29,"name":"MYOSIN LIGHT CHAIN 1, 3"},{"dbname":"COILS","id":"Coil","locations":[{"end":149,"start":129}],"match_end":149,"match_start":129,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2308456,"start_pos":2307863,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":22,"start":8}}],"name":"cdc31","ortholog_annotations":[{"gene_uniquename":"SJAG_01760","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1866","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01760","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1867","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01760","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1868","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01760","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1682.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01760","ortholog_taxonid":4932,"ortholog_uniquename":"YOR257W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01760","ortholog_taxonid":4932,"ortholog_uniquename":"YOR257W","reference_uniquename":"PMID:26896847"}],"product":"spindle pole body half bridge protein, centrin Cdc31","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005509","GO:0008017"]}},"subset_termids":["GO:0005634","GO:0030163","GO:0015630","GO:0005816","GO:0000226","GO:0008017","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005509":null,"GO:0005634":null,"GO:0005829":null,"GO:0008017":null,"GO:0035974":null,"GO:0043161":null,"GO:0061496":null,"GO:1903087":null,"GO:1990395":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01760.1"],"transcripts_by_uniquename":{"SJAG_01760.1":null},"uniprot_identifier":"B6JYU0","uniquename":"SJAG_01760"}


id: SJAG_01761
data:
  {"coiled_coil_coords":[{"range":{"end":255,"start":235}}],"cv_annotations":{"biological_process":[{"annotations":[115509],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[115506],"is_not":false,"summary":null,"term":"GO:0015030"},{"annotations":[115507],"is_not":false,"summary":null,"term":"GO:0005737"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01761","EnsemblGenomes-Tr:EEB06709","UniProtKB/TrEMBL:B6JYU1"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":293,"start":148}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"wcy4","uniquename":"SJAG_05745"},{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"}],"genes_by_uniquename":{"HGNC:2184":null,"SJAG_01761":null,"SPCC1682.03c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":255,"start":235}],"match_end":255,"match_start":235,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":293,"start":148}],"match_end":293,"match_start":148,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":224,"start":163},{"end":293,"start":282}],"match_end":293,"match_start":163,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":273,"start":254}],"match_end":273,"match_start":254,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":250,"start":240}],"match_end":250,"match_start":240,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2309940,"start_pos":2308735,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":145,"start":133}},{"range":{"end":206,"start":156}},{"range":{"end":223,"start":209}},{"range":{"end":251,"start":241}},{"range":{"end":304,"start":281}}],"name":"mug174","ortholog_annotations":[{"gene_uniquename":"SJAG_01761","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2184","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01761","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1682.03c","reference_uniquename":"PMID:21511999"}],"product":"coilin, Mug174","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0016071","GO:0065003","GO:0005634","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0005737":null,"GO:0015030":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01761.1"],"transcripts_by_uniquename":{"SJAG_01761.1":null},"uniprot_identifier":"B6JYU1","uniquename":"SJAG_01761"}


id: SJAG_01762
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73649],"is_not":false,"summary":null,"term":"GO:0006271"},{"annotations":[73648],"is_not":false,"summary":null,"term":"GO:0000727"},{"annotations":[73650],"is_not":false,"summary":null,"term":"GO:1902975"},{"annotations":[61159],"is_not":false,"summary":null,"term":"GO:0006279"}],"cellular_component":[{"annotations":[115490],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[115491],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[61157],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[73647],"is_not":false,"summary":null,"term":"GO:0042555"},{"annotations":[61156],"is_not":false,"summary":null,"term":"GO:0005656"},{"annotations":[61155],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[61147],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[115502],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[115503],"is_not":false,"summary":null,"term":"GO:0003688"},{"annotations":[73645],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[73646],"is_not":false,"summary":null,"term":"GO:0017116"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06710","InterPro:IPR027925","GOA:B6JYU2","UniProtKB/TrEMBL:B6JYU2","InterPro:IPR008046","InterPro:IPR033762","InterPro:IPR012340","EnsemblGenomes-Gn:SJAG_01762","InterPro:IPR041562","InterPro:IPR027417","InterPro:IPR031327","InterPro:IPR001208"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":716,"start":649}},{"range":{"end":779,"start":728}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01757"},{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"}],"genes_by_uniquename":{"HGNC:6945":null,"SJAG_01762":null,"SPCC1682.02c":null,"YEL032W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MCM P-loop domain","id":"PF00493","interpro_description":"MCM domain","interpro_id":"IPR001208","interpro_name":"MCM_dom","locations":[{"end":485,"start":293}],"match_end":485,"match_start":293,"name":"MCM"},{"dbname":"PFAM","description":"MCM AAA-lid domain","id":"PF17855","interpro_description":"MCM, AAA-lid domain","interpro_id":"IPR041562","interpro_name":"MCM_lid","locations":[{"end":637,"start":554}],"match_end":637,"match_start":554,"name":"MCM_lid"},{"dbname":"PFAM","description":"MCM3-like, winged helix domain","id":"PF23191","interpro_description":"MCM3-like, winged helix domain","interpro_id":"IPR056575","interpro_name":"WH_MCM3_C","locations":[{"end":852,"start":781}],"match_end":852,"match_start":781,"name":"WH_MCM3_C"},{"dbname":"PFAM","description":"MCM OB domain","id":"PF17207","interpro_description":"MCM OB domain","interpro_id":"IPR033762","interpro_name":"MCM_OB","locations":[{"end":249,"start":118}],"match_end":249,"match_start":118,"name":"MCM_OB"},{"dbname":"PFAM","description":"MCM N-terminal domain","id":"PF14551","interpro_description":"MCM, N-terminal domain","interpro_id":"IPR027925","interpro_name":"MCM_N","locations":[{"end":103,"start":15}],"match_end":103,"match_start":15,"name":"MCM_N"},{"dbname":"PROSITE_PROFILES","description":"MCM family domain profile.","id":"PS50051","interpro_description":"MCM domain","interpro_id":"IPR001208","interpro_name":"MCM_dom","locations":[{"end":481,"start":305}],"match_end":481,"match_start":305,"name":"MCM_2"},{"dbname":"SMART","id":"SM00350","interpro_description":"Mini-chromosome maintenance protein","interpro_id":"IPR031327","interpro_name":"MCM","locations":[{"end":641,"start":113}],"match_end":641,"match_start":113,"name":"mcm"},{"dbname":"PRINTS","description":"Mini-chromosome maintenance (MCM) protein family signature","id":"PR01657","interpro_description":"MCM domain","interpro_id":"IPR001208","interpro_name":"MCM_dom","locations":[{"end":361,"start":346},{"end":440,"start":428},{"end":463,"start":455}],"match_end":463,"match_start":346,"name":"MCMFAMILY"},{"dbname":"PRINTS","description":"Mini-chromosome maintenance (MCM) protein 3 signature","id":"PR01659","interpro_description":"DNA replication licensing factor Mcm3","interpro_id":"IPR008046","interpro_name":"Mcm3","locations":[{"end":205,"start":191},{"end":229,"start":217},{"end":454,"start":444},{"end":487,"start":477},{"end":643,"start":628}],"match_end":643,"match_start":191,"name":"MCMPROTEIN3"},{"dbname":"FUNFAM","description":"DNA helicase","id":"G3DSA:2.20.28.10:FF:000008","locations":[{"end":199,"start":144}],"match_end":199,"match_start":144},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":269,"start":16}],"match_end":269,"match_start":16,"name":"Nucleic acid-binding proteins"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":486,"start":315},{"end":651,"start":540}],"match_end":651,"match_start":315,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":143,"start":118},{"end":249,"start":200}],"match_end":249,"match_start":118},{"dbname":"GENE3D","id":"G3DSA:3.30.1640.10","locations":[{"end":113,"start":7}],"match_end":113,"match_start":7},{"dbname":"GENE3D","id":"G3DSA:2.20.28.10","locations":[{"end":199,"start":144}],"match_end":199,"match_start":144},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":487,"start":286},{"end":661,"start":525}],"match_end":661,"match_start":286},{"dbname":"PANTHER","id":"PTHR11630","interpro_description":"Mini-chromosome maintenance protein","interpro_id":"IPR031327","interpro_name":"MCM","locations":[{"end":415,"start":14}],"match_end":415,"match_start":14,"name":"DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":716,"start":649},{"end":779,"start":728}],"match_end":779,"match_start":649,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":699,"start":681}],"match_end":699,"match_start":681,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":775,"start":732}],"match_end":775,"match_start":732,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2313042,"start_pos":2310395,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":231,"start":221}},{"range":{"end":333,"start":327}},{"range":{"end":473,"start":458}},{"range":{"end":669,"start":656}},{"range":{"end":698,"start":680}}],"name":"mcm3","ortholog_annotations":[{"gene_uniquename":"SJAG_01762","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6945","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01762","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1682.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01762","ortholog_taxonid":4932,"ortholog_uniquename":"YEL032W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01762","ortholog_taxonid":4932,"ortholog_uniquename":"YEL032W","reference_uniquename":"PMID:26896847"}],"product":"MCM complex subunit Mcm3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003688","GO:0003697","GO:0005524"],"not-binding":["GO:0016887","GO:0017116"]}},"subset_termids":["GO:0016887","GO:0006310","GO:0005634","GO:0016853","GO:0005694","GO:0006260","GO:0140097","GO:0005829","GO:0005654","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000727":null,"GO:0000785":null,"GO:0003688":null,"GO:0003697":null,"GO:0005524":null,"GO:0005656":null,"GO:0005829":null,"GO:0006271":null,"GO:0006279":null,"GO:0016887":null,"GO:0017116":null,"GO:0031261":null,"GO:0042555":null,"GO:0043596":null,"GO:1902975":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01762.1"],"transcripts_by_uniquename":{"SJAG_01762.1":null},"uniprot_identifier":"B6JYU2","uniquename":"SJAG_01762"}


id: SJAG_01763
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61927],"is_not":false,"summary":null,"term":"GO:0006122"}],"cellular_component":[{"annotations":[61928],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[61926],"is_not":false,"summary":null,"term":"GO:0045275"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06711","GOA:B6JYU3","InterPro:IPR008027","InterPro:IPR036656","UniProtKB/TrEMBL:B6JYU3","EnsemblGenomes-Gn:SJAG_01763"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"wcy3","uniquename":"SJAG_05746"},{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"}],"genes_by_uniquename":{"HGNC:30863":null,"SJAG_01763":null,"SPCC1682.01":null,"YGR183C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like","id":"PF05365","interpro_description":"Cytochrome b-c1 complex subunit 9","interpro_id":"IPR008027","interpro_name":"QCR9","locations":[{"end":54,"start":3}],"match_end":54,"match_start":3,"name":"UCR_UQCRX_QCR9"},{"dbname":"FUNFAM","description":"Cytochrome b-c1 complex subunit 9","id":"G3DSA:1.20.5.260:FF:000001","locations":[{"end":59,"start":1}],"match_end":59,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF81514","interpro_description":"Cytochrome b-c1 complex subunit 9 superfamily","interpro_id":"IPR036656","interpro_name":"QCR9_sf","locations":[{"end":57,"start":3}],"match_end":57,"match_start":3,"name":"Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)"},{"dbname":"GENE3D","id":"G3DSA:1.20.5.260","interpro_description":"Cytochrome b-c1 complex subunit 9 superfamily","interpro_id":"IPR036656","interpro_name":"QCR9_sf","locations":[{"end":66,"start":2}],"match_end":66,"match_start":2},{"dbname":"PANTHER","id":"PTHR12980","interpro_description":"Cytochrome b-c1 complex subunit 9","interpro_id":"IPR008027","interpro_name":"QCR9","locations":[{"end":65,"start":3}],"match_end":65,"match_start":3,"name":"UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX, SUBUNIT X"}],"location":{"chromosome_name":"supercont5.3","end_pos":2313681,"start_pos":2313308,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":66,"start":58}}],"name":"qcr9","ortholog_annotations":[{"gene_uniquename":"SJAG_01763","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30863","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01763","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1682.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01763","ortholog_taxonid":4932,"ortholog_uniquename":"YGR183C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01763","ortholog_taxonid":4932,"ortholog_uniquename":"YGR183C","reference_uniquename":"PMID:26896847"}],"product":"ubiquinol-cytochrome-c reductase complex subunit 9","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000044":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006091","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0006122":null,"GO:0045275":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":34,"start":15}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01763.1"],"transcripts_by_uniquename":{"SJAG_01763.1":null},"uniprot_identifier":"B6JYU3","uniquename":"SJAG_01763"}


id: SJAG_01764
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92403],"is_not":false,"summary":null,"term":"GO:0030490"},{"annotations":[78322],"is_not":false,"summary":null,"term":"GO:2000234"},{"annotations":[78319],"is_not":false,"summary":null,"term":"GO:0045943"}],"cellular_component":[{"annotations":[67078],"is_not":false,"summary":null,"term":"GO:0032040"},{"annotations":[92402],"is_not":false,"summary":null,"term":"GO:0034455"}],"molecular_function":[{"annotations":[92406],"is_not":false,"summary":null,"term":"GO:0030515"}]},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srp68","uniquename":"SJAG_01759"},{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"}],"genes_by_uniquename":{"HGNC:25725":null,"SJAG_01764":null,"SPAC1B3.13":null,"YPL126W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD repeat-containing protein 75 second beta-propeller","id":"PF23769","locations":[{"end":565,"start":448}],"match_end":565,"match_start":448,"name":"Beta-prop_WDR75_2nd"},{"dbname":"PFAM","description":"WD repeat-containing protein 75 first beta-propeller","id":"PF23869","locations":[{"end":291,"start":2}],"match_end":291,"match_start":2,"name":"Beta-prop_WDR75_1st"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":259,"start":224}],"match_end":259,"match_start":224,"name":"WD_REPEATS_REGION"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":265,"start":224}],"match_end":265,"match_start":224,"name":"WD_REPEATS_2"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":64,"start":20},{"end":256,"start":217},{"end":468,"start":433}],"match_end":468,"match_start":20,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF69322","locations":[{"end":313,"start":149},{"end":541,"start":442}],"match_end":541,"match_start":149,"name":"Tricorn protease domain 2"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":350,"start":3}],"match_end":350,"match_start":3},{"dbname":"PANTHER","id":"PTHR44215","interpro_description":"WD repeat-containing protein 75","interpro_id":"IPR053826","interpro_name":"WDR75","locations":[{"end":667,"start":443}],"match_end":667,"match_start":443,"name":"WD REPEAT-CONTAINING PROTEIN 75"}],"location":{"chromosome_name":"supercont5.3","end_pos":2316419,"start_pos":2314133,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":253,"start":242}}],"name":"nan1","ortholog_annotations":[{"gene_uniquename":"SJAG_01764","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25725","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01764","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1B3.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01764","ortholog_taxonid":4932,"ortholog_uniquename":"YPL126W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01764","ortholog_taxonid":4932,"ortholog_uniquename":"YPL126W","reference_uniquename":"PMID:26896847"}],"product":"small subunit processome, U3 snoRNP-associated WD repeat protein Nan1/Utp17","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030515"]}},"subset_termids":["GO:0006351","GO:0005730","GO:0030684","GO:0042254","GO:0005634","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0030490":null,"GO:0030515":null,"GO:0032040":null,"GO:0034455":null,"GO:0045943":null,"GO:2000234":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01764.1"],"transcripts_by_uniquename":{"SJAG_01764.1":null},"uniprot_identifier":"B6JYU4","uniquename":"SJAG_01764"}


id: SJAG_01765
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92394],"is_not":false,"summary":null,"term":"GO:0006362"},{"annotations":[92395],"is_not":false,"summary":null,"term":"GO:0006367"},{"annotations":[77417],"is_not":false,"summary":null,"term":"GO:0042797"}],"cellular_component":[{"annotations":[92384],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77421],"is_not":false,"summary":null,"term":"GO:0005736"},{"annotations":[77419],"is_not":false,"summary":null,"term":"GO:0005665"},{"annotations":[77420],"is_not":false,"summary":null,"term":"GO:0005666"}],"molecular_function":[{"annotations":[65907],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[65908],"is_not":false,"summary":null,"term":"GO:0003899"},{"annotations":[77418],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYU5","InterPro:IPR000268","EnsemblGenomes-Gn:SJAG_01765","InterPro:IPR020789","GOA:B6JYU5","EnsemblGenomes-Tr:EEB06713","InterPro:IPR023580"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc31","uniquename":"SJAG_01760"},{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"}],"genes_by_uniquename":{"HGNC:9199":null,"SJAG_01765":null,"SPAC1B3.12c":null,"YOR210W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA polymerases N / 8 kDa subunit","id":"PF01194","interpro_description":"DNA-directed RNA polymerase subunit RPABC5/Rpb10","interpro_id":"IPR000268","interpro_name":"RPABC5/Rpb10","locations":[{"end":59,"start":2}],"match_end":59,"match_start":2,"name":"RNA_pol_N"},{"dbname":"PROSITE_PATTERNS","description":"RNA polymerases N / 8 Kd subunits signature.","id":"PS01112","interpro_description":"RNA polymerases, subunit N, zinc binding site","interpro_id":"IPR020789","interpro_name":"RNA_pol_suN_Zn-BS","locations":[{"end":11,"start":2}],"match_end":11,"match_start":2,"name":"RNA_POL_N_8KD"},{"dbname":"FUNFAM","description":"DNA-directed RNA polymerases I, II, and III subunit","id":"G3DSA:1.10.10.60:FF:000024","locations":[{"end":69,"start":1}],"match_end":69,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF46924","interpro_description":"RNA polymerase subunit RPB10","interpro_id":"IPR023580","interpro_name":"RNA_pol_su_RPB10","locations":[{"end":63,"start":1}],"match_end":63,"match_start":1,"name":"RNA polymerase subunit RPB10"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.60","locations":[{"end":71,"start":1}],"match_end":71,"match_start":1},{"dbname":"PANTHER","id":"PTHR23431","interpro_description":"DNA-directed RNA polymerase subunit RPABC5/Rpb10","interpro_id":"IPR000268","interpro_name":"RPABC5/Rpb10","locations":[{"end":69,"start":1}],"match_end":69,"match_start":1,"name":"DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF005653","interpro_description":"DNA-directed RNA polymerase subunit RPABC5/Rpb10","interpro_id":"IPR000268","interpro_name":"RPABC5/Rpb10","locations":[{"end":70,"start":1}],"match_end":70,"match_start":1,"name":"RpoN_RPB10"},{"dbname":"HAMAP","description":"DNA-directed RNA polymerase subunit Rpo10 [rpo10].","id":"MF_00250","interpro_description":"DNA-directed RNA polymerase subunit RPABC5/Rpb10","interpro_id":"IPR000268","interpro_name":"RPABC5/Rpb10","locations":[{"end":56,"start":2}],"match_end":56,"match_start":2,"name":"RNApol_arch_Rpo10"},{"dbname":"NCBIFAM","description":"DNA-directed RNA polymerase subunit N","id":"NF003089","locations":[{"end":62,"start":2}],"match_end":62,"match_start":2,"name":"PRK04016.1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2317464,"start_pos":2316970,"strand":"forward"},"name":"rpb10","ortholog_annotations":[{"gene_uniquename":"SJAG_01765","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9199","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01765","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1B3.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01765","ortholog_taxonid":4932,"ortholog_uniquename":"YOR210W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01765","ortholog_taxonid":4932,"ortholog_uniquename":"YOR210W","reference_uniquename":"PMID:26896847"}],"product":"DNA-directed RNA polymerase I, II, and III subunit Rpb10","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677","GO:0008270"],"not-binding":["GO:0003899"]}},"subset_termids":["GO:0140098","GO:0006351","GO:0006399","GO:0005730","GO:0016779","GO:0005829","GO:0005654","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0003899":null,"GO:0005665":null,"GO:0005666":null,"GO:0005736":null,"GO:0005829":null,"GO:0006362":null,"GO:0006367":null,"GO:0008270":null,"GO:0042797":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01765.1"],"transcripts_by_uniquename":{"SJAG_01765.1":null},"uniprot_identifier":"B6JYU5","uniquename":"SJAG_01765"}


id: SJAG_01766
data:
  {"cv_annotations":{"PSI-MOD":[{"annotations":[81095],"is_not":false,"summary":null,"term":"MOD:00128"}],"biological_process":[{"annotations":[73756],"is_not":false,"summary":null,"term":"GO:0019264"},{"annotations":[61283],"is_not":false,"summary":null,"term":"GO:0035999"}],"cellular_component":[{"annotations":[73759],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[73761],"is_not":false,"summary":null,"term":"GO:0004372"},{"annotations":[73760],"is_not":false,"summary":null,"term":"GO:0030170"}],"mondo":[{"annotations":[86065],"is_not":false,"summary":null,"term":"MONDO:0030866"}]},"dbxrefs":["InterPro:IPR015422","EnsemblGenomes-Tr:EEB06714","InterPro:IPR019798","InterPro:IPR039429","UniProtKB/TrEMBL:B6JYU6","InterPro:IPR015424","InterPro:IPR015421","EnsemblGenomes-Gn:SJAG_01766","InterPro:IPR001085","GOA:B6JYU6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug174","uniquename":"SJAG_01761"},{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"}],"genes_by_uniquename":{"HGNC:10850":null,"HGNC:10852":null,"SJAG_01766":null,"SPAC24C9.12c":null,"YLR058C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Serine hydroxymethyltransferase","id":"PF00464","interpro_description":"Serine hydroxymethyltransferase-like domain","interpro_id":"IPR039429","interpro_name":"SHMT-like_dom","locations":[{"end":412,"start":13}],"match_end":412,"match_start":13,"name":"SHMT"},{"dbname":"CDD","description":"SHMT","id":"cd00378","interpro_description":"Serine hydroxymethyltransferase","interpro_id":"IPR001085","interpro_name":"Ser_HO-MeTrfase","locations":[{"end":440,"start":14}],"match_end":440,"match_start":14,"name":"SHMT"},{"dbname":"PROSITE_PATTERNS","description":"Serine hydroxymethyltransferase pyridoxal-phosphate attachment site.","id":"PS00096","interpro_description":"Serine hydroxymethyltransferase, pyridoxal phosphate binding site","interpro_id":"IPR019798","interpro_name":"Ser_HO-MeTrfase_PLP_BS","locations":[{"end":252,"start":236}],"match_end":252,"match_start":236,"name":"SHMT"},{"dbname":"FUNFAM","description":"Serine hydroxymethyltransferase","id":"G3DSA:3.40.640.10:FF:000097","locations":[{"end":259,"start":42}],"match_end":259,"match_start":42},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":465,"start":6}],"match_end":465,"match_start":6,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.10","interpro_description":"Pyridoxal phosphate-dependent transferase, small domain","interpro_id":"IPR015422","interpro_name":"PyrdxlP-dep_Trfase_small","locations":[{"end":41,"start":17},{"end":465,"start":316}],"match_end":465,"match_start":17,"name":"Aspartate Aminotransferase, domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":315,"start":42}],"match_end":315,"match_start":42},{"dbname":"PANTHER","id":"PTHR11680","interpro_description":"Serine hydroxymethyltransferase-like","interpro_id":"IPR049943","interpro_name":"Ser_HO-MeTrfase-like","locations":[{"end":464,"start":10}],"match_end":464,"match_start":10,"name":"SERINE HYDROXYMETHYLTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF000412","interpro_description":"Serine hydroxymethyltransferase","interpro_id":"IPR001085","interpro_name":"Ser_HO-MeTrfase","locations":[{"end":465,"start":2}],"match_end":465,"match_start":2,"name":"SHMT"},{"dbname":"HAMAP","description":"Serine hydroxymethyltransferase [glyA].","id":"MF_00051","interpro_description":"Serine hydroxymethyltransferase","interpro_id":"IPR001085","interpro_name":"Ser_HO-MeTrfase","locations":[{"end":467,"start":12}],"match_end":467,"match_start":12,"name":"SHMT"},{"dbname":"NCBIFAM","description":"serine hydroxymethyltransferase","id":"NF000586","locations":[{"end":422,"start":17}],"match_end":422,"match_start":17,"name":"PRK00011.1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2319282,"start_pos":2317879,"strand":"reverse"},"name":"shm1","ortholog_annotations":[{"gene_uniquename":"SJAG_01766","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10850","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01766","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10852","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01766","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24C9.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01766","ortholog_taxonid":4932,"ortholog_uniquename":"YLR058C","reference_uniquename":"PMID:29761456"}],"product":"serine hydroxymethyltransferase Shm1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030170"],"not-binding":["GO:0004372"]}},"subset_termids":["MONDO:0700092","GO:0005739","GO:0006520","GO:0016741"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004372":null,"GO:0005739":null,"GO:0019264":null,"GO:0030170":null,"GO:0035999":null,"MOD:00128":null,"MONDO:0030866":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01766.1"],"transcripts_by_uniquename":{"SJAG_01766.1":null},"uniprot_identifier":"B6JYU6","uniquename":"SJAG_01766"}


id: SJAG_01767
data:
  {"cv_annotations":{"biological_process":[{"annotations":[66696],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[94850],"is_not":false,"summary":null,"term":"GO:0005763"}],"molecular_function":[{"annotations":[66695],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYU7","GOA:B6JYU7","EnsemblGenomes-Gn:SJAG_01767","EnsemblGenomes-Tr:EEB06715","InterPro:IPR017264"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mcm3","uniquename":"SJAG_01762"},{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"}],"genes_by_uniquename":{"HGNC:23518":null,"SJAG_01767":null,"SPAC24C9.13c":null,"YDL045W-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PANTHER","id":"PTHR28066","interpro_description":"Small ribosomal subunit protein mS37, fungal-type","interpro_id":"IPR017264","interpro_name":"Ribosomal_mS37_fun","locations":[{"end":87,"start":12}],"match_end":87,"match_start":12,"name":"37S RIBOSOMAL PROTEIN MRP10, MITOCHONDRIAL"}],"location":{"chromosome_name":"supercont5.3","end_pos":2320228,"start_pos":2319860,"strand":"reverse"},"name":"mrp10","ortholog_annotations":[{"gene_uniquename":"SJAG_01767","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23518","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01767","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24C9.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01767","ortholog_taxonid":4932,"ortholog_uniquename":"YDL045W-A","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit S37","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005763":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01767.1"],"transcripts_by_uniquename":{"SJAG_01767.1":null},"uniprot_identifier":"B6JYU7","uniquename":"SJAG_01767"}


id: SJAG_01768
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76783],"is_not":false,"summary":null,"term":"GO:0030968"},{"annotations":[76782],"is_not":false,"summary":null,"term":"GO:0036503"}],"cellular_component":[{"annotations":[94854],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94855],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[76781],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[94859],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6JYU8","InterPro:IPR039138","UniProtKB/TrEMBL:B6JYU8","EnsemblGenomes-Gn:SJAG_01768","EnsemblGenomes-Tr:EEB06716","InterPro:IPR003323","InterPro:IPR038765"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":138,"start":105}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"qcr9","uniquename":"SJAG_01763"},{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"}],"genes_by_uniquename":{"HGNC:25035":null,"SJAG_01768":null,"SPAC24C9.14":null,"YFL044C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"OTU1, UBXL domain","id":"PF21403","locations":[{"end":53,"start":5}],"match_end":53,"match_start":5,"name":"OTU1_UBXL"},{"dbname":"PFAM","description":"Ubiquitin thioesterase OTU1, C-terminal C2H2-type zinc finger","id":"PF24560","locations":[{"end":342,"start":309}],"match_end":342,"match_start":309,"name":"zf-C2H2_OTU1_C"},{"dbname":"CDD","description":"OTU_OTU1","id":"cd22745","locations":[{"end":301,"start":146}],"match_end":301,"match_start":146,"name":"OTU_OTU1"},{"dbname":"PROSITE_PROFILES","description":"OTU domain profile.","id":"PS50802","interpro_description":"OTU domain","interpro_id":"IPR003323","interpro_name":"OTU_dom","locations":[{"end":267,"start":148}],"match_end":267,"match_start":148,"name":"OTU"},{"dbname":"SUPERFAMILY","id":"SSF54001","interpro_description":"Papain-like cysteine peptidase superfamily","interpro_id":"IPR038765","interpro_name":"Papain-like_cys_pep_sf","locations":[{"end":263,"start":147}],"match_end":263,"match_start":147,"name":"Cysteine proteinases"},{"dbname":"GENE3D","id":"G3DSA:3.90.70.80","locations":[{"end":308,"start":134}],"match_end":308,"match_start":134},{"dbname":"GENE3D","id":"G3DSA:3.10.20.90","locations":[{"end":85,"start":3}],"match_end":85,"match_start":3},{"dbname":"PANTHER","id":"PTHR13312","locations":[{"end":339,"start":2}],"match_end":339,"match_start":2,"name":"HIV-INDUCED PROTEIN-7-LIKE PROTEASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":138,"start":105}],"match_end":138,"match_start":105,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":127,"start":105}],"match_end":127,"match_start":105,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2321531,"start_pos":2320503,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":68,"start":57}}],"name":"otu1","ortholog_annotations":[{"gene_uniquename":"SJAG_01768","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25035","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01768","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24C9.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01768","ortholog_taxonid":4932,"ortholog_uniquename":"YFL044C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01768","ortholog_taxonid":4932,"ortholog_uniquename":"YFL044C","reference_uniquename":"PMID:26896847"}],"product":"ubiquitin-specific cysteine protease, OTU family, Otu1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0004843"]}},"subset_termids":["GO:0140096","GO:0005634","GO:0005829","GO:0008233","GO:0023052","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004843":null,"GO:0005634":null,"GO:0005829":null,"GO:0008270":null,"GO:0030968":null,"GO:0036503":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01768.1"],"transcripts_by_uniquename":{"SJAG_01768.1":null},"uniprot_identifier":"B6JYU8","uniquename":"SJAG_01768"}


id: SJAG_01769
data:
  {"coiled_coil_coords":[{"range":{"end":394,"start":367}},{"range":{"end":423,"start":396}}],"cv_annotations":{"biological_process":[{"annotations":[75291],"is_not":false,"summary":null,"term":"GO:0061640"},{"annotations":[94866],"is_not":false,"summary":null,"term":"GO:0070583"}],"cellular_component":[{"annotations":[94860],"is_not":false,"summary":null,"term":"GO:0032175"},{"annotations":[94861],"is_not":false,"summary":null,"term":"GO:0032152"},{"annotations":[75288],"is_not":false,"summary":null,"term":"GO:0015630"},{"annotations":[94863],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[94864],"is_not":false,"summary":null,"term":"GO:0032169"}],"molecular_function":[{"annotations":[63222],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[75287],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[75290],"is_not":false,"summary":null,"term":"GO:0060090"},{"annotations":[94870],"is_not":false,"summary":null,"term":"GO:0070273"}]},"dbxrefs":["GOA:B6JYU9","EnsemblGenomes-Tr:EEB06717","EnsemblGenomes-Gn:SJAG_01769","InterPro:IPR016491","InterPro:IPR027417","InterPro:IPR030379","UniProtKB/TrEMBL:B6JYU9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":44,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nan1","uniquename":"SJAG_01764"},{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"}],"genes_by_uniquename":{"SJAG_01769":null,"SPAC24C9.15c":null,"YDL225W":null,"YDR218C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Septin","id":"PF00735","interpro_description":"Septin-type guanine nucleotide-binding (G) domain","interpro_id":"IPR030379","interpro_name":"G_SEPTIN_dom","locations":[{"end":339,"start":77}],"match_end":339,"match_start":77,"name":"Septin"},{"dbname":"CDD","description":"CDC_Septin","id":"cd01850","interpro_description":"Septin","interpro_id":"IPR016491","interpro_name":"Septin","locations":[{"end":337,"start":77}],"match_end":337,"match_start":77,"name":"CDC_Septin"},{"dbname":"PROSITE_PROFILES","description":"Septin-type guanine nucleotide-binding (G) domain profile.","id":"PS51719","interpro_description":"Septin-type guanine nucleotide-binding (G) domain","interpro_id":"IPR030379","interpro_name":"G_SEPTIN_dom","locations":[{"end":335,"start":76}],"match_end":335,"match_start":76,"name":"G_SEPTIN"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":303,"start":64}],"match_end":303,"match_start":64,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":337,"start":56}],"match_end":337,"match_start":56},{"dbname":"PANTHER","id":"PTHR18884","locations":[{"end":412,"start":52}],"match_end":412,"match_start":52,"name":"SEPTIN"},{"dbname":"PIRSF","id":"PIRSF006698","interpro_description":"Septin","interpro_id":"IPR016491","interpro_name":"Septin","locations":[{"end":429,"start":5}],"match_end":429,"match_start":5,"name":"Septin"},{"dbname":"COILS","id":"Coil","locations":[{"end":394,"start":367},{"end":423,"start":396}],"match_end":423,"match_start":367,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":44,"start":1}],"match_end":44,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":18,"start":1}],"match_end":18,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":35,"start":19}],"match_end":35,"match_start":19,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2323130,"start_pos":2321710,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":90,"start":81}}],"name":"spn5","ortholog_annotations":[{"gene_uniquename":"SJAG_01769","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC24C9.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01769","ortholog_taxonid":4932,"ortholog_uniquename":"YDL225W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01769","ortholog_taxonid":4932,"ortholog_uniquename":"YDR218C","reference_uniquename":"PMID:26896847"}],"product":"meiotic septin Spn5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525","GO:0070273"],"not-binding":["GO:0060090","GO:0003924"]}},"subset_termids":["GO:0030437","GO:0005634","GO:0060090","GO:0061024","GO:0015630","GO:0005938","GO:0003924","GO:0008289"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003924":null,"GO:0005525":null,"GO:0005634":null,"GO:0015630":null,"GO:0032152":null,"GO:0032169":null,"GO:0032175":null,"GO:0060090":null,"GO:0061640":null,"GO:0070273":null,"GO:0070583":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01769.1"],"transcripts_by_uniquename":{"SJAG_01769.1":null},"uniprot_identifier":"B6JYU9","uniquename":"SJAG_01769"}


id: SJAG_01770
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90062],"is_not":false,"summary":null,"term":"GO:0003333"}],"cellular_component":[{"annotations":[90059],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[90060],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[90061],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[90063],"is_not":false,"summary":null,"term":"GO:0015171"}]},"dbxrefs":["GOA:B6JYV0","InterPro:IPR024528","EnsemblGenomes-Gn:SJAG_01770","InterPro:IPR010619","UniProtKB/TrEMBL:B6JYV0","EnsemblGenomes-Tr:EEB06718"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":31,"start":1}},{"range":{"end":202,"start":94}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpb10","uniquename":"SJAG_01765"},{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"}],"genes_by_uniquename":{"SJAG_01770":null,"SPAC16A10.01":null,"YJL107C":null,"YJL108C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Putative threonine/serine exporter","id":"PF06738","interpro_description":"Threonine/serine exporter-like, N-terminal domain","interpro_id":"IPR010619","interpro_name":"ThrE-like_N","locations":[{"end":548,"start":304}],"match_end":548,"match_start":304,"name":"ThrE"},{"dbname":"PFAM","description":"Threonine/Serine exporter, ThrE","id":"PF12821","interpro_description":"Threonine/Serine exporter, ThrE","interpro_id":"IPR024528","interpro_name":"ThrE_2","locations":[{"end":721,"start":574}],"match_end":721,"match_start":574,"name":"ThrE_2"},{"dbname":"PANTHER","id":"PTHR31082","interpro_description":"ThrE/Ser Exporter","interpro_id":"IPR051361","interpro_name":"ThrE/Ser_Exporter","locations":[{"end":730,"start":35}],"match_end":730,"match_start":35,"name":"PHEROMONE-REGULATED MEMBRANE PROTEIN 10"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":31,"start":1},{"end":202,"start":94}],"match_end":202,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":133,"start":124},{"end":157,"start":146}],"match_end":157,"match_start":124,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2326194,"start_pos":2323889,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":86,"start":72}},{"range":{"end":181,"start":170}},{"range":{"end":448,"start":438}},{"range":{"end":690,"start":672}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01770","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16A10.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01770","ortholog_taxonid":4932,"ortholog_uniquename":"YJL107C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01770","ortholog_taxonid":4932,"ortholog_uniquename":"YJL108C","reference_uniquename":"PMID:26896847"}],"product":"plasma membrane ThrE amino acid transmembrane transporter family protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015171"]}},"subset_termids":["GO:0055085","GO:0005886","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003333":null,"GO:0005886":null,"GO:0015171":null,"GO:0032153":null,"GO:0051286":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":432,"start":410}},{"assigned_by":"TMHMM","range":{"end":454,"start":437}},{"assigned_by":"TMHMM","range":{"end":480,"start":458}},{"assigned_by":"TMHMM","range":{"end":514,"start":492}},{"assigned_by":"TMHMM","range":{"end":551,"start":529}},{"assigned_by":"TMHMM","range":{"end":590,"start":571}},{"assigned_by":"TMHMM","range":{"end":638,"start":616}},{"assigned_by":"TMHMM","range":{"end":667,"start":645}},{"assigned_by":"TMHMM","range":{"end":728,"start":706}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01770.1"],"transcripts_by_uniquename":{"SJAG_01770.1":null},"uniprot_identifier":"B6JYV0","uniquename":"SJAG_01770"}


id: SJAG_01771
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90066],"is_not":false,"summary":null,"term":"GO:0045899"}],"cellular_component":[{"annotations":[90064],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[90065],"is_not":false,"summary":null,"term":"GO:0005667"}],"molecular_function":[{"annotations":[90067],"is_not":false,"summary":null,"term":"GO:0003690"},{"annotations":[90068],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[62300],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["InterPro:IPR003173","InterPro:IPR009044","EnsemblGenomes-Gn:SJAG_01771","EnsemblGenomes-Tr:EEB06719","GOA:B6JYV1","UniProtKB/TrEMBL:B6JYV1"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":30,"start":1}},{"range":{"end":137,"start":88}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"shm1","uniquename":"SJAG_01766"},{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"}],"genes_by_uniquename":{"HGNC:19985":null,"SJAG_01771":null,"SPAC16A10.02":null,"YMR039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Transcriptional Coactivator p15 (PC4)","id":"PF02229","interpro_description":"Transcriptional coactivator p15 (PC4), C-terminal","interpro_id":"IPR003173","interpro_name":"PC4_C","locations":[{"end":77,"start":29}],"match_end":77,"match_start":29,"name":"PC4"},{"dbname":"SUPERFAMILY","id":"SSF54447","interpro_description":"ssDNA-binding transcriptional regulator","interpro_id":"IPR009044","interpro_name":"ssDNA-bd_transcriptional_reg","locations":[{"end":87,"start":27}],"match_end":87,"match_start":27,"name":"ssDNA-binding transcriptional regulator domain"},{"dbname":"GENE3D","id":"G3DSA:2.30.31.10","interpro_description":"ssDNA-binding transcriptional regulator","interpro_id":"IPR009044","interpro_name":"ssDNA-bd_transcriptional_reg","locations":[{"end":92,"start":16}],"match_end":92,"match_start":16,"name":"Transcriptional Coactivator Pc4; Chain A"},{"dbname":"PANTHER","id":"PTHR13215","interpro_description":"RNA polymerase II transcriptional coactivator Sub1/Tcp4-like","interpro_id":"IPR045125","interpro_name":"Sub1/Tcp4-like","locations":[{"end":87,"start":9}],"match_end":87,"match_start":9,"name":"RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":30,"start":1},{"end":137,"start":88}],"match_end":137,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":30,"start":15},{"end":137,"start":96}],"match_end":137,"match_start":15,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2327021,"start_pos":2326553,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":128,"start":115}}],"name":"sub1","ortholog_annotations":[{"gene_uniquename":"SJAG_01771","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19985","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01771","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16A10.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01771","ortholog_taxonid":4932,"ortholog_uniquename":"YMR039C","reference_uniquename":"PMID:29761456"}],"product":"transcription coactivator PC4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003697","GO:0003690"],"not-binding":["GO:0003713"]}},"subset_termids":["GO:0003713","GO:0065003","GO:0060090","GO:0006355","GO:0005634","GO:0006351","GO:0003712"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003690":null,"GO:0003697":null,"GO:0003713":null,"GO:0005634":null,"GO:0005667":null,"GO:0045899":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01771.1"],"transcripts_by_uniquename":{"SJAG_01771.1":null},"uniprot_identifier":"B6JYV1","uniquename":"SJAG_01771"}


id: SJAG_01772
data:
  {"coiled_coil_coords":[{"range":{"end":779,"start":752}}],"cv_annotations":{"biological_process":[{"annotations":[80173],"is_not":false,"summary":null,"term":"GO:0007032"},{"annotations":[90075],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[80176],"is_not":false,"summary":null,"term":"GO:0048284"},{"annotations":[80174],"is_not":false,"summary":null,"term":"GO:0007033"},{"annotations":[80172],"is_not":false,"summary":null,"term":"GO:0006904"}],"cellular_component":[{"annotations":[90070],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80170],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[90072],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[80175],"is_not":false,"summary":null,"term":"GO:1902500"}],"molecular_function":[{"annotations":[80171],"is_not":false,"summary":null,"term":"GO:0030674"},{"annotations":[90080],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[69421],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[86408],"is_not":false,"summary":null,"term":"MONDO:0030486"},{"annotations":[86304],"is_not":false,"summary":null,"term":"MONDO:0014732"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06720","InterPro:IPR001841","EnsemblGenomes-Gn:SJAG_01772","InterPro:IPR016528","InterPro:IPR036322","UniProtKB/TrEMBL:B6JYV2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrp10","uniquename":"SJAG_01767"},{"name":"otu1","uniquename":"SJAG_01768"},{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"}],"genes_by_uniquename":{"HGNC:14583":null,"SJAG_01772":null,"SPAC16A10.03c":null,"YMR231W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PEP5/VPS11 TPR","id":"PF23356","locations":[{"end":655,"start":378}],"match_end":655,"match_start":378,"name":"TPR_PEP5_VPS11"},{"dbname":"PFAM","description":"Zinc-finger","id":"PF17122","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":817,"start":783}],"match_end":817,"match_start":783,"name":"zf-C3H2C3"},{"dbname":"PFAM","description":"PEP5/VPS11 N-terminal","id":"PF23341","locations":[{"end":326,"start":11}],"match_end":326,"match_start":11,"name":"PEP5_VPS11_N"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":196,"start":36}],"match_end":196,"match_start":36,"name":"WD40 repeat-like"},{"dbname":"PANTHER","id":"PTHR23323","locations":[{"end":818,"start":10}],"match_end":818,"match_start":10,"name":"VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":779,"start":752}],"match_end":779,"match_start":752,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2329862,"start_pos":2327088,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":212,"start":197}},{"range":{"end":477,"start":465}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01772","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14583","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01772","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16A10.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01772","ortholog_taxonid":4932,"ortholog_uniquename":"YMR231W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01772","ortholog_taxonid":4932,"ortholog_uniquename":"YMR231W","reference_uniquename":"PMID:26896847"}],"product":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0030674","GO:0061630"]}},"subset_termids":["GO:0005768","MONDO:0005559","GO:0005773","GO:0005634","GO:0140056","GO:0140096","GO:0031410","GO:0016746","GO:0019787","GO:0060090","GO:0016192","GO:0005829","MONDO:0003441"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005768":null,"GO:0005829":null,"GO:0006886":null,"GO:0006904":null,"GO:0007032":null,"GO:0007033":null,"GO:0008270":null,"GO:0030674":null,"GO:0048284":null,"GO:0061630":null,"GO:1902500":null,"MONDO:0014732":null,"MONDO:0030486":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01772.1"],"transcripts_by_uniquename":{"SJAG_01772.1":null},"uniprot_identifier":"B6JYV2","uniquename":"SJAG_01772"}


id: SJAG_01774
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90087],"is_not":false,"summary":null,"term":"GO:0000917"},{"annotations":[90088],"is_not":false,"summary":null,"term":"GO:0071852"},{"annotations":[90089],"is_not":false,"summary":null,"term":"GO:2001043"},{"annotations":[90090],"is_not":false,"summary":null,"term":"GO:0030994"},{"annotations":[73752],"is_not":false,"summary":null,"term":"GO:0032956"},{"annotations":[73751],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[90082],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[90084],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[73748],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90086],"is_not":false,"summary":null,"term":"GO:0000935"}],"molecular_function":[{"annotations":[73747],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[73750],"is_not":false,"summary":null,"term":"GO:0003924"}],"mondo":[{"annotations":[87159],"is_not":false,"summary":null,"term":"MONDO:0032884"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01774","InterPro:IPR027417","EnsemblGenomes-Tr:EEB06721","UniProtKB/TrEMBL:B6JYV3","InterPro:IPR001806","InterPro:IPR003578","InterPro:IPR005225","GOA:B6JYV3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spn5","uniquename":"SJAG_01769"},{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"}],"genes_by_uniquename":{"HGNC:667":null,"HGNC:668":null,"HGNC:669":null,"SJAG_01774":null,"SPAC16A10.04":null,"YKR055W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ras family","id":"PF00071","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":185,"start":15}],"match_end":185,"match_start":15,"name":"Ras"},{"dbname":"CDD","description":"Rho4_like","id":"cd04132","locations":[{"end":202,"start":11}],"match_end":202,"match_start":11,"name":"Rho4_like"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Ras family profile.","id":"PS51421","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":202,"start":6}],"match_end":202,"match_start":6,"name":"RAS"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rho family profile.","id":"PS51420","locations":[{"end":187,"start":7}],"match_end":187,"match_start":7,"name":"RHO"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rab1 family profile.","id":"PS51419","locations":[{"end":202,"start":9}],"match_end":202,"match_start":9,"name":"RAB"},{"dbname":"SMART","id":"SM00175","locations":[{"end":190,"start":15}],"match_end":190,"match_start":15,"name":"rab_sub_5"},{"dbname":"SMART","id":"SM00174","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":190,"start":16}],"match_end":190,"match_start":16,"name":"rho_sub_3"},{"dbname":"SMART","id":"SM00173","locations":[{"end":190,"start":9}],"match_end":190,"match_start":9,"name":"ras_sub_4"},{"dbname":"PRINTS","description":"Transforming protein P21 ras signature","id":"PR00449","locations":[{"end":35,"start":14},{"end":53,"start":37},{"end":78,"start":56},{"end":131,"start":118},{"end":187,"start":165}],"match_end":187,"match_start":14,"name":"RASTRNSFRMNG"},{"dbname":"FUNFAM","description":"Rho GTPase Rho4","id":"G3DSA:3.40.50.300:FF:000678","locations":[{"end":199,"start":8}],"match_end":199,"match_start":8},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":187,"start":14}],"match_end":187,"match_start":14,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":201,"start":4}],"match_end":201,"match_start":4},{"dbname":"PANTHER","id":"PTHR24072","interpro_description":"Small GTPase Rho","interpro_id":"IPR003578","interpro_name":"Small_GTPase_Rho","locations":[{"end":189,"start":14}],"match_end":189,"match_start":14,"name":"RHO FAMILY GTPASE"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":145,"start":12}],"match_end":145,"match_start":12,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.3","end_pos":2333161,"start_pos":2332212,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":14,"start":3}},{"range":{"end":162,"start":153}}],"name":"rho4","ortholog_annotations":[{"gene_uniquename":"SJAG_01774","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:667","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01774","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:668","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01774","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:669","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01774","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16A10.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01774","ortholog_taxonid":4932,"ortholog_uniquename":"YKR055W","reference_uniquename":"PMID:29761456"}],"product":"Rho family GTPase Rho4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0003924"]}},"subset_termids":["GO:0023052","GO:0000935","GO:0005938","GO:0071554","GO:0005829","GO:0005886","GO:0030036","GO:0003924"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000917":null,"GO:0000935":null,"GO:0003924":null,"GO:0005525":null,"GO:0005829":null,"GO:0005938":null,"GO:0007165":null,"GO:0009898":null,"GO:0030994":null,"GO:0032956":null,"GO:0071852":null,"GO:2001043":null,"MONDO:0032884":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01774.1"],"transcripts_by_uniquename":{"SJAG_01774.1":null},"uniprot_identifier":"B6JYV3","uniquename":"SJAG_01774"}


id: SJAG_01775
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90103],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[90104],"is_not":false,"summary":null,"term":"GO:1990976"},{"annotations":[90105],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[90096],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[63840],"is_not":false,"summary":null,"term":"GO:0042729"},{"annotations":[63839],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[90099],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[90102],"is_not":false,"summary":null,"term":"GO:0005876"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01775","EnsemblGenomes-Tr:EEB06722","InterPro:IPR013958","GOA:B6JYV4","UniProtKB/TrEMBL:B6JYV4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01770"},{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"}],"genes_by_uniquename":{"SJAG_01775":null,"SPAC16A10.05c":null,"YDR016C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DASH complex subunit Dad1","id":"PF08649","interpro_description":"DASH complex subunit Dad1","interpro_id":"IPR013958","interpro_name":"DASH_Dad1","locations":[{"end":73,"start":21}],"match_end":73,"match_start":21,"name":"DASH_Dad1"},{"dbname":"PANTHER","id":"PTHR28025","interpro_description":"DASH complex subunit Dad1","interpro_id":"IPR013958","interpro_name":"DASH_Dad1","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1,"name":"DASH COMPLEX SUBUNIT DAD1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2333974,"start_pos":2333575,"strand":"reverse"},"name":"dad1","ortholog_annotations":[{"gene_uniquename":"SJAG_01775","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16A10.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01775","ortholog_taxonid":4932,"ortholog_uniquename":"YDR016C","reference_uniquename":"PMID:29761456"}],"product":"DASH complex subunit Dad1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0140013","GO:0072686","GO:0005634","GO:0005816","GO:0000070","GO:0005829","GO:0005694","GO:0000776","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0005876":null,"GO:0042729":null,"GO:0044732":null,"GO:0051455":null,"GO:0072686":null,"GO:1990758":null,"GO:1990976":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01775.1"],"transcripts_by_uniquename":{"SJAG_01775.1":null},"uniprot_identifier":"B6JYV4","uniquename":"SJAG_01775"}


id: SJAG_01776
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72763],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[72760],"is_not":false,"summary":null,"term":"GO:0016925"}],"cellular_component":[{"annotations":[90106],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72761],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[72762],"is_not":false,"summary":null,"term":"GO:0030915"}],"molecular_function":[{"annotations":[72764],"is_not":false,"summary":null,"term":"GO:0061665"},{"annotations":[60089],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[87365],"is_not":false,"summary":null,"term":"MONDO:0014991"}]},"dbxrefs":["InterPro:IPR013083","EnsemblGenomes-Gn:SJAG_01776","InterPro:IPR026846","UniProtKB/TrEMBL:B6JYV5","GOA:B6JYV5","InterPro:IPR004181","EnsemblGenomes-Tr:EEB06723"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sub1","uniquename":"SJAG_01771"},{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"}],"genes_by_uniquename":{"HGNC:26513":null,"SJAG_01776":null,"SPAC16A10.06c":null,"YEL019C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc-finger of the MIZ type in Nse subunit","id":"PF11789","interpro_description":"Zinc finger, MIZ-type","interpro_id":"IPR004181","interpro_name":"Znf_MIZ","locations":[{"end":223,"start":169}],"match_end":223,"match_start":169,"name":"zf-Nse"},{"dbname":"CDD","description":"SPL-RING_NSE2","id":"cd16651","interpro_description":"Zinc finger, MIZ-type","interpro_id":"IPR004181","interpro_name":"Znf_MIZ","locations":[{"end":243,"start":181}],"match_end":243,"match_start":181,"name":"SPL-RING_NSE2"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger SP-RING-type profile.","id":"PS51044","interpro_description":"Zinc finger, MIZ-type","interpro_id":"IPR004181","interpro_name":"Znf_MIZ","locations":[{"end":246,"start":167}],"match_end":246,"match_start":167,"name":"ZF_SP_RING"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":242,"start":175}],"match_end":242,"match_start":175,"name":"RING/U-box"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":256,"start":173}],"match_end":256,"match_start":173,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR21330","interpro_description":"E3 SUMO-protein ligase Nse2 (Mms21)","interpro_id":"IPR026846","interpro_name":"Nse2(Mms21)","locations":[{"end":250,"start":20}],"match_end":250,"match_start":20,"name":"E3 SUMO-PROTEIN LIGASE NSE2"}],"location":{"chromosome_name":"supercont5.3","end_pos":2335267,"start_pos":2334305,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":54,"start":39}},{"range":{"end":123,"start":104}}],"name":"nse2","ortholog_annotations":[{"gene_uniquename":"SJAG_01776","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26513","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01776","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16A10.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01776","ortholog_taxonid":4932,"ortholog_uniquename":"YEL019C","reference_uniquename":"PMID:29761456"}],"product":"Smc5-6 complex non-SMC SUMO ligase subunit Nse2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0061665"]}},"subset_termids":["MONDO:0006025","GO:0070647","GO:0016746","GO:0006310","GO:0006281","GO:0005634","GO:0019787","GO:0140096","GO:0005694","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0005634":null,"GO:0005829":null,"GO:0008270":null,"GO:0016925":null,"GO:0030915":null,"GO:0061665":null,"MONDO:0014991":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01776.1"],"transcripts_by_uniquename":{"SJAG_01776.1":null},"uniprot_identifier":"B6JYV5","uniquename":"SJAG_01776"}


id: SJAG_01777
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90120],"is_not":false,"summary":null,"term":"GO:0070197"},{"annotations":[90121],"is_not":false,"summary":null,"term":"GO:0032121"},{"annotations":[90122],"is_not":false,"summary":null,"term":"GO:0044820"},{"annotations":[90123],"is_not":false,"summary":null,"term":"GO:0031848"}],"cellular_component":[{"annotations":[90113],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[119601,119753],"is_not":false,"summary":null,"term":"GO:0000781"},{"annotations":[90115],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[90116],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[90118],"is_not":false,"summary":null,"term":"GO:0110092"},{"annotations":[90119],"is_not":false,"summary":null,"term":"GO:0070187"}],"molecular_function":[{"annotations":[90126],"is_not":false,"summary":null,"term":"GO:0003691"},{"annotations":[90127],"is_not":false,"summary":null,"term":"GO:0060090"}]},"dbxrefs":["InterPro:IPR001005","UniProtKB/TrEMBL:B6JYV6","EnsemblGenomes-Gn:SJAG_01777","EnsemblGenomes-Tr:EEB06724"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":28,"start":1}},{"range":{"end":83,"start":52}},{"range":{"end":108,"start":89}},{"range":{"end":581,"start":553}}],"feature_publications":[{"reference_uniquename":"PMID:24184107","source":"canto"},{"reference_uniquename":"PMID:32109380","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01772"},{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"}],"genes_by_uniquename":{"HGNC:11728":null,"HGNC:11729":null,"SJAG_01777":null,"SPAC16A10.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CDD","description":"TAZ1_RBM","id":"cd11671","locations":[{"end":585,"start":501}],"match_end":585,"match_start":501,"name":"TAZ1_RBM"},{"dbname":"SMART","id":"SM00717","interpro_description":"SANT/Myb domain","interpro_id":"IPR001005","interpro_name":"SANT/Myb","locations":[{"end":631,"start":576}],"match_end":631,"match_start":576,"name":"sant"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.60","locations":[{"end":639,"start":568}],"match_end":639,"match_start":568},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":28,"start":1},{"end":83,"start":52},{"end":108,"start":89},{"end":581,"start":553}],"match_end":581,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":76,"start":57}],"match_end":76,"match_start":57,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":24,"start":12}],"match_end":24,"match_start":12,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":578,"start":563}],"match_end":578,"match_start":563,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2338292,"start_pos":2336247,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":336,"start":317}}],"name":"taz1","ortholog_annotations":[{"gene_uniquename":"SJAG_01777","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11728","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01777","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11729","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01777","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16A10.07c","reference_uniquename":"PMID:21511999"}],"product":"shelterin complex subunit Taz1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:24184107":null,"PMID:29761456":null,"PMID:32109380":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003691"],"not-binding":["GO:0060090"]}},"subset_termids":["GO:0060090","GO:0034399","GO:0005816","GO:0005694","GO:0140013","GO:0005634","GO:0032200","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000781":null,"GO:0000785":null,"GO:0003691":null,"GO:0031848":null,"GO:0032121":null,"GO:0034399":null,"GO:0035974":null,"GO:0044820":null,"GO:0060090":null,"GO:0070187":null,"GO:0070197":null,"GO:0110092":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01777.1"],"transcripts_by_uniquename":{"SJAG_01777.1":null},"uniprot_identifier":"B6JYV6","uniquename":"SJAG_01777"}


id: SJAG_01778
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98933],"is_not":false,"summary":null,"term":"GO:0022408"},{"annotations":[98934],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[64086],"is_not":false,"summary":null,"term":"GO:0016592"}],"molecular_function":[{"annotations":[98935],"is_not":false,"summary":null,"term":"GO:0003713"}],"mondo":[{"annotations":[86890],"is_not":false,"summary":null,"term":"MONDO:0032485"}]},"dbxrefs":["InterPro:IPR021643","UniProtKB/TrEMBL:B6JYV7","GOA:B6JYV7","EnsemblGenomes-Tr:EEB06725","InterPro:IPR009401","EnsemblGenomes-Gn:SJAG_01778"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":422,"start":384}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05750"},{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"}],"genes_by_uniquename":{"HGNC:22474":null,"SJAG_01778":null,"SPAC589.02c":null,"YDR443C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mediator complex subunit 13 N-terminal","id":"PF11597","interpro_description":"Mediator complex, subunit Med13, N-terminal","interpro_id":"IPR021643","interpro_name":"Mediator_Med13_N","locations":[{"end":263,"start":11}],"match_end":263,"match_start":11,"name":"Med13_N"},{"dbname":"PFAM","description":"Mediator complex subunit 13 C-terminal domain","id":"PF06333","interpro_description":"Mediator complex subunit Med13, C-terminal","interpro_id":"IPR009401","interpro_name":"Med13_C","locations":[{"end":981,"start":862}],"match_end":981,"match_start":862,"name":"Med13_C"},{"dbname":"PANTHER","id":"PTHR48249","interpro_description":"Mediator complex subunit 13","interpro_id":"IPR051139","interpro_name":"Mediator_complx_sub13","locations":[{"end":720,"start":651}],"match_end":720,"match_start":651,"name":"MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":422,"start":384}],"match_end":422,"match_start":384,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":400,"start":384},{"end":421,"start":412}],"match_end":421,"match_start":384,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2342563,"start_pos":2339111,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":745,"start":735}},{"range":{"end":827,"start":816}}],"name":"med13","ortholog_annotations":[{"gene_uniquename":"SJAG_01778","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:22474","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01778","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01778","ortholog_taxonid":4932,"ortholog_uniquename":"YDR443C","reference_uniquename":"PMID:29761456"}],"product":"mediator complex subunit Med13","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003713"]}},"subset_termids":["GO:0006351","GO:0003713","GO:0006355","GO:0005634","GO:0007155","MONDO:0000426","GO:0060090","GO:0003712"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003713":null,"GO:0016592":null,"GO:0022408":null,"GO:0045944":null,"MONDO:0032485":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01778.1"],"transcripts_by_uniquename":{"SJAG_01778.1":null},"uniprot_identifier":"B6JYV7","uniquename":"SJAG_01778"}


id: SJAG_01779
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98937],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[98936],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06726","UniProtKB/TrEMBL:B6JYV8","EnsemblGenomes-Gn:SJAG_01779"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":130,"start":1}},{"range":{"end":175,"start":144}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rho4","uniquename":"SJAG_01774"},{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"}],"genes_by_uniquename":{"HGNC:24218":null,"SJAG_01779":null,"SPAC589.03c":null,"YDR060W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":130,"start":1},{"end":175,"start":144}],"match_end":175,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":119,"start":102},{"end":175,"start":157}],"match_end":175,"match_start":102,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":10,"start":1}],"match_end":10,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":25,"start":11},{"end":51,"start":34},{"end":96,"start":60},{"end":130,"start":120}],"match_end":130,"match_start":11,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2343782,"start_pos":2343139,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":174,"start":156}}],"name":"noc12","ortholog_annotations":[{"gene_uniquename":"SJAG_01779","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24218","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01779","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01779","ortholog_taxonid":4932,"ortholog_uniquename":"YDR060W","reference_uniquename":"PMID:29761456"}],"product":"CCAAT-binding factor, Noc1 related","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01779.1"],"transcripts_by_uniquename":{"SJAG_01779.1":null},"uniprot_identifier":"B6JYV8","uniquename":"SJAG_01779"}


id: SJAG_01780
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98939],"is_not":false,"summary":null,"term":"GO:0045040"}],"cellular_component":[{"annotations":[62093],"is_not":false,"summary":null,"term":"GO:0001401"}],"mondo":[{"annotations":[86063],"is_not":false,"summary":null,"term":"MONDO:0030880"}]},"dbxrefs":["InterPro:IPR033468","UniProtKB/TrEMBL:B6JYV9","EnsemblGenomes-Tr:EEB06727","EnsemblGenomes-Gn:SJAG_01780","GOA:B6JYV9","InterPro:IPR019564"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dad1","uniquename":"SJAG_01775"},{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"}],"genes_by_uniquename":{"HGNC:7506":null,"SJAG_01780":null,"SPAC589.04":null,"YHR083W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glutathione S-transferase, C-terminal domain","id":"PF17171","interpro_description":"Metaxin, glutathione S-transferase domain","interpro_id":"IPR033468","interpro_name":"Metaxin_GST","locations":[{"end":251,"start":189}],"match_end":251,"match_start":189,"name":"GST_C_6"},{"dbname":"PFAM","description":"Outer mitochondrial membrane transport complex protein","id":"PF10568","interpro_description":"Mitochondrial outer membrane transport complex Sam37/metaxin, N-terminal domain","interpro_id":"IPR019564","interpro_name":"Sam37/metaxin_N","locations":[{"end":165,"start":61}],"match_end":165,"match_start":61,"name":"Tom37"},{"dbname":"PANTHER","id":"PTHR12289","interpro_description":"Mitochondrial Protein Transport Metaxin","interpro_id":"IPR050931","interpro_name":"Mito_Protein_Transport_Metaxin","locations":[{"end":251,"start":57}],"match_end":251,"match_start":57,"name":"METAXIN RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2345045,"start_pos":2344153,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":240,"start":228}}],"name":"mtx2","ortholog_annotations":[{"gene_uniquename":"SJAG_01780","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7506","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01780","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01780","ortholog_taxonid":4932,"ortholog_uniquename":"YHR083W","reference_uniquename":"PMID:29761456"}],"product":"metaxin 2 (Sam35)","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0061024","GO:0007005","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001401":null,"GO:0045040":null,"MONDO:0030880":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01780.1"],"transcripts_by_uniquename":{"SJAG_01780.1":null},"uniprot_identifier":"B6JYV9","uniquename":"SJAG_01780"}


id: SJAG_01781
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98943],"is_not":false,"summary":null,"term":"GO:0043174"},{"annotations":[98945],"is_not":false,"summary":null,"term":"GO:0002099"}],"cellular_component":[{"annotations":[98941],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[98947],"is_not":false,"summary":null,"term":"GO:0106432"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06728","InterPro:IPR019438","GOA:B6JYW0","UniProtKB/TrEMBL:B6JYW0","EnsemblGenomes-Gn:SJAG_01781"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nse2","uniquename":"SJAG_01776"},{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"}],"genes_by_uniquename":{"HGNC:28144":null,"SJAG_01781":null,"SPAC589.05c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Queuosine salvage protein","id":"PF10343","interpro_description":"Queuosine salvage protein family","interpro_id":"IPR019438","interpro_name":"Q_salvage","locations":[{"end":346,"start":51}],"match_end":346,"match_start":51,"name":"Q_salvage"},{"dbname":"PANTHER","id":"PTHR21314","interpro_description":"Queuosine salvage protein family","interpro_id":"IPR019438","interpro_name":"Q_salvage","locations":[{"end":346,"start":4}],"match_end":346,"match_start":4,"name":"QUEUOSINE 5'-PHOSPHATE N-GLYCOSYLASE_HYDROLASE-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2346364,"start_pos":2345133,"strand":"reverse"},"name":"qtr3","ortholog_annotations":[{"gene_uniquename":"SJAG_01781","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28144","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01781","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.05c","reference_uniquename":"PMID:21511999"}],"product":"RNA queuosine modification protein Qtr3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0106432"]}},"subset_termids":["GO:0006399","GO:0055086","GO:0016798","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002099":null,"GO:0005829":null,"GO:0043174":null,"GO:0106432":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01781.1"],"transcripts_by_uniquename":{"SJAG_01781.1":null},"uniprot_identifier":"B6JYW0","uniquename":"SJAG_01781"}


id: SJAG_01782
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98950],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[70083],"is_not":false,"summary":null,"term":"GO:0045047"}],"cellular_component":[{"annotations":[98949],"is_not":false,"summary":null,"term":"GO:0005789"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01782","EnsemblGenomes-Tr:EEB06729","GOA:B6JYW1","InterPro:IPR012098","UniProtKB/TrEMBL:B6JYW1"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":199,"start":171}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"taz1","uniquename":"SJAG_01777"},{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"}],"genes_by_uniquename":{"SJAG_01782":null,"SPAC589.06c":null,"YBR106W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphate transport (Pho88)","id":"PF10032","interpro_description":"SRP-independent targeting protein 3","interpro_id":"IPR012098","interpro_name":"SND3_fun","locations":[{"end":176,"start":1}],"match_end":176,"match_start":1,"name":"Pho88"},{"dbname":"PANTHER","id":"PTHR28112","interpro_description":"SRP-independent targeting protein 3","interpro_id":"IPR012098","interpro_name":"SND3_fun","locations":[{"end":196,"start":1}],"match_end":196,"match_start":1,"name":"SRP-INDEPENDENT TARGETING PROTEIN 3"},{"dbname":"PIRSF","id":"PIRSF008756","interpro_description":"SRP-independent targeting protein 3","interpro_id":"IPR012098","interpro_name":"SND3_fun","locations":[{"end":188,"start":1}],"match_end":188,"match_start":1,"name":"P_tr_PHO88"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":199,"start":171}],"match_end":199,"match_start":171,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":181,"start":171}],"match_end":181,"match_start":171,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":192,"start":182}],"match_end":192,"match_start":182,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2347246,"start_pos":2346560,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":193,"start":167}}],"name":"snd302","ortholog_annotations":[{"gene_uniquename":"SJAG_01782","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01782","ortholog_taxonid":4932,"ortholog_uniquename":"YBR106W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01782","ortholog_taxonid":4932,"ortholog_uniquename":"YBR106W","reference_uniquename":"PMID:26896847"}],"product":"SRP-independent ER targeting protein Snd3b","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0061024","GO:0005789","GO:0006605","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0045047":null,"GO:0045048":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":50,"start":28}},{"assigned_by":"TMHMM","range":{"end":116,"start":99}},{"assigned_by":"TMHMM","range":{"end":142,"start":120}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01782.1"],"transcripts_by_uniquename":{"SJAG_01782.1":null},"uniprot_identifier":"B6JYW1","uniquename":"SJAG_01782"}


id: SJAG_01783
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73826],"is_not":false,"summary":null,"term":"GO:0000422"},{"annotations":[73828],"is_not":false,"summary":null,"term":"GO:0061723"},{"annotations":[73822],"is_not":false,"summary":null,"term":"GO:0044804"},{"annotations":[73827],"is_not":false,"summary":null,"term":"GO:0000425"}],"cellular_component":[{"annotations":[73823],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98954],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[73821],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[98956],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[73820],"is_not":false,"summary":null,"term":"GO:0034045"}],"molecular_function":[{"annotations":[73825],"is_not":false,"summary":null,"term":"GO:0080025"},{"annotations":[73819],"is_not":false,"summary":null,"term":"GO:0032266"},{"annotations":[73824],"is_not":false,"summary":null,"term":"GO:0030674"}],"mondo":[{"annotations":[87501],"is_not":false,"summary":null,"term":"MONDO:0032759"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06730","InterPro:IPR001680","EnsemblGenomes-Gn:SJAG_01783","InterPro:IPR015943","InterPro:IPR036322","UniProtKB/TrEMBL:B6JYW2","GOA:B6JYW2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"med13","uniquename":"SJAG_01778"},{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"}],"genes_by_uniquename":{"HGNC:25471":null,"HGNC:32225":null,"SJAG_01783":null,"SPAC589.07c":null,"YFR021W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PROPPIN","id":"PF21032","interpro_description":"PROPPIN","interpro_id":"IPR048720","interpro_name":"PROPPIN","locations":[{"end":150,"start":9},{"end":364,"start":166}],"match_end":364,"match_start":9,"name":"PROPPIN"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":225,"start":185},{"end":269,"start":228}],"match_end":269,"match_start":185,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":283,"start":4},{"end":348,"start":318}],"match_end":348,"match_start":4,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":353,"start":63}],"match_end":353,"match_start":63},{"dbname":"PANTHER","id":"PTHR11227","interpro_description":"PROPPIN","interpro_id":"IPR048720","interpro_name":"PROPPIN","locations":[{"end":363,"start":3}],"match_end":363,"match_start":3,"name":"WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES  WIPI -RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2349087,"start_pos":2347720,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":178,"start":159}}],"name":"atg1801","ortholog_annotations":[{"gene_uniquename":"SJAG_01783","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25471","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01783","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32225","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01783","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.07c"},{"gene_uniquename":"SJAG_01783","ortholog_taxonid":4932,"ortholog_uniquename":"YFR021W","reference_uniquename":"PMID:29761456"}],"product":"autophagy associated WD repeat protein Atg18a","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0032266","GO:0080025"],"not-binding":["GO:0030674"]}},"subset_termids":["GO:0006091","GO:0031410","GO:0005829","GO:0005773","GO:0006914","GO:0005975","GO:0008289","GO:0060090","GO:0000407","GO:0005794","GO:0005768"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0000422":null,"GO:0000425":null,"GO:0005768":null,"GO:0005794":null,"GO:0005829":null,"GO:0030674":null,"GO:0032266":null,"GO:0034045":null,"GO:0044804":null,"GO:0061723":null,"GO:0080025":null,"MONDO:0032759":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01783.1"],"transcripts_by_uniquename":{"SJAG_01783.1":null},"uniprot_identifier":"B6JYW2","uniquename":"SJAG_01783"}


id: SJAG_01784
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61859],"is_not":false,"summary":null,"term":"GO:0006012"},{"annotations":[109971],"is_not":false,"summary":null,"term":"GO:0052574"}],"cellular_component":[{"annotations":[74218],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[74219],"is_not":false,"summary":null,"term":"GO:0003978"}],"mondo":[{"annotations":[86395],"is_not":false,"summary":null,"term":"MONDO:0009257"},{"annotations":[87511],"is_not":false,"summary":null,"term":"MONDO:0958333"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYW3","EnsemblGenomes-Tr:EEB06731","EnsemblGenomes-Gn:SJAG_01784","InterPro:IPR036291","InterPro:IPR005886","InterPro:IPR016040","GOA:B6JYW3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"noc12","uniquename":"SJAG_01779"},{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"}],"genes_by_uniquename":{"HGNC:4116":null,"SJAG_01784":null,"SPBC365.14c":null,"YBR019C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GDP-mannose 4,6 dehydratase","id":"PF16363","interpro_description":"NAD(P)-binding domain","interpro_id":"IPR016040","interpro_name":"NAD(P)-bd_dom","locations":[{"end":371,"start":46}],"match_end":371,"match_start":46,"name":"GDP_Man_Dehyd"},{"dbname":"CDD","description":"UDP_G4E_1_SDR_e","id":"cd05247","interpro_description":"UDP-glucose 4-epimerase","interpro_id":"IPR005886","interpro_name":"UDP_G4E","locations":[{"end":376,"start":45}],"match_end":376,"match_start":45,"name":"UDP_G4E_1_SDR_e"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":381,"start":43}],"match_end":381,"match_start":43,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":233,"start":45},{"end":315,"start":284}],"match_end":315,"match_start":45},{"dbname":"GENE3D","id":"G3DSA:3.90.25.10","locations":[{"end":283,"start":234},{"end":375,"start":316}],"match_end":375,"match_start":234},{"dbname":"PANTHER","id":"PTHR43725","locations":[{"end":385,"start":40}],"match_end":385,"match_start":40,"name":"UDP-GLUCOSE 4-EPIMERASE"},{"dbname":"NCBIFAM","description":"UDP-glucose 4-epimerase GalE","id":"TIGR01179","interpro_description":"UDP-glucose 4-epimerase","interpro_id":"IPR005886","interpro_name":"UDP_G4E","locations":[{"end":379,"start":45}],"match_end":379,"match_start":45,"name":"galE"},{"dbname":"NCBIFAM","description":"UDP-glucose 4-epimerase","id":"NF007956","locations":[{"end":383,"start":45}],"match_end":383,"match_start":45,"name":"PRK10675.1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2350829,"start_pos":2349580,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":107,"start":99}}],"name":"uge1","ortholog_annotations":[{"gene_uniquename":"SJAG_01784","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4116","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01784","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC365.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01784","ortholog_taxonid":4932,"ortholog_uniquename":"YBR019C","reference_uniquename":"PMID:29761456"}],"product":"UDP-glucose 4-epimerase Uge1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003978"]}},"subset_termids":["MONDO:0005570","GO:0005829","MONDO:0037792","GO:0016853","GO:0005975","MONDO:0005328","GO:0055086","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003978":null,"GO:0005829":null,"GO:0006012":null,"GO:0052574":null,"MONDO:0009257":null,"MONDO:0958333":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01784.1"],"transcripts_by_uniquename":{"SJAG_01784.1":null},"uniprot_identifier":"B6JYW3","uniquename":"SJAG_01784"}


id: SJAG_01785
data:
  {"coiled_coil_coords":[{"range":{"end":376,"start":356}}],"cv_annotations":{"biological_process":[{"annotations":[98162],"is_not":false,"summary":null,"term":"GO:0007052"}],"cellular_component":[{"annotations":[98160],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[98161],"is_not":false,"summary":null,"term":"GO:1990578"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYW4","GOA:B6JYW4","EnsemblGenomes-Gn:SJAG_01785","EnsemblGenomes-Tr:EEB06732"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":24,"start":1}},{"range":{"end":99,"start":40}},{"range":{"end":153,"start":114}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtx2","uniquename":"SJAG_01780"},{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"}],"genes_by_uniquename":{"SJAG_01785":null,"SPAC4D7.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"GENE3D","id":"G3DSA:2.60.120.260","locations":[{"end":607,"start":491}],"match_end":607,"match_start":491},{"dbname":"COILS","id":"Coil","locations":[{"end":376,"start":356}],"match_end":376,"match_start":356,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":24,"start":1},{"end":99,"start":40},{"end":153,"start":114}],"match_end":153,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":54,"start":44}],"match_end":54,"match_start":44,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":67,"start":55}],"match_end":67,"match_start":55,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":145,"start":126}],"match_end":145,"match_start":126,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2353010,"start_pos":2351109,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":19,"start":2}},{"range":{"end":53,"start":43}},{"range":{"end":166,"start":131}},{"range":{"end":242,"start":227}},{"range":{"end":290,"start":273}},{"range":{"end":390,"start":381}}],"name":"csi2","ortholog_annotations":[{"gene_uniquename":"SJAG_01785","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4D7.07c","reference_uniquename":"PMID:21511999"}],"product":"mitotic chromosome segregation protein Csi2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0000226","GO:0005789","GO:0015630","GO:0005816","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0007052":null,"GO:0044732":null,"GO:1990578":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":215,"start":193}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01785.1"],"transcripts_by_uniquename":{"SJAG_01785.1":null},"uniprot_identifier":"B6JYW4","uniquename":"SJAG_01785"}


id: SJAG_01786
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77161],"is_not":false,"summary":null,"term":"GO:0019354"},{"annotations":[98157],"is_not":false,"summary":null,"term":"GO:0000103"}],"cellular_component":[{"annotations":[98154],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98155],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[77162],"is_not":false,"summary":null,"term":"GO:0043115"},{"annotations":[98159],"is_not":false,"summary":null,"term":"GO:0051266"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYW5","InterPro:IPR028281","EnsemblGenomes-Tr:EEB06733","InterPro:IPR028161","InterPro:IPR028162","InterPro:IPR036291","GOA:B6JYW5","EnsemblGenomes-Gn:SJAG_01786"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"qtr3","uniquename":"SJAG_01781"},{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"}],"genes_by_uniquename":{"SJAG_01786":null,"SPAC4D7.06c":null,"YBR213W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sirohaem biosynthesis protein C-terminal","id":"PF14823","interpro_description":"Siroheme biosynthesis protein Met8, C-terminal","interpro_id":"IPR028162","interpro_name":"Met8_C","locations":[{"end":207,"start":145}],"match_end":207,"match_start":145,"name":"Sirohm_synth_C"},{"dbname":"PFAM","description":"Sirohaem biosynthesis protein central","id":"PF14824","interpro_description":"Siroheme synthase, central domain","interpro_id":"IPR028281","interpro_name":"Sirohaem_synthase_central","locations":[{"end":142,"start":116}],"match_end":142,"match_start":116,"name":"Sirohm_synth_M"},{"dbname":"PFAM","description":"Putative NAD(P)-binding","id":"PF13241","locations":[{"end":112,"start":19}],"match_end":112,"match_start":19,"name":"NAD_binding_7"},{"dbname":"SUPERFAMILY","id":"SSF75615","locations":[{"end":209,"start":105}],"match_end":209,"match_start":105,"name":"Siroheme synthase middle domains-like"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":110,"start":17}],"match_end":110,"match_start":17,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:1.10.3280.10","locations":[{"end":227,"start":147}],"match_end":227,"match_start":147,"name":"Siroheme synthase; domain 3"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":97,"start":14}],"match_end":97,"match_start":14},{"dbname":"GENE3D","id":"G3DSA:3.30.160.110","locations":[{"end":143,"start":111}],"match_end":143,"match_start":111,"name":"Siroheme synthase; domain 2"},{"dbname":"PANTHER","id":"PTHR35330","interpro_description":"Siroheme biosynthesis protein Met8-like","interpro_id":"IPR028161","interpro_name":"Met8-like","locations":[{"end":214,"start":9}],"match_end":214,"match_start":9,"name":"SIROHEME BIOSYNTHESIS PROTEIN MET8"}],"location":{"chromosome_name":"supercont5.3","end_pos":2354642,"start_pos":2353720,"strand":"forward"},"name":"met8","ortholog_annotations":[{"gene_uniquename":"SJAG_01786","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4D7.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01786","ortholog_taxonid":4932,"ortholog_uniquename":"YBR213W","reference_uniquename":"PMID:29761456"}],"product":"siroheme synthase Met8","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0051266","GO:0043115"]}},"subset_termids":["GO:0033013","GO:0005829","GO:0006790","GO:0005634","GO:0016829","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000103":null,"GO:0005634":null,"GO:0005829":null,"GO:0019354":null,"GO:0043115":null,"GO:0051266":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":249,"start":230}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01786.1"],"transcripts_by_uniquename":{"SJAG_01786.1":null},"uniprot_identifier":"B6JYW5","uniquename":"SJAG_01786"}


id: SJAG_01787
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":775,"start":775}}],"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":688,"start":688}},{"assigned_by":"UniProtKB","ligand":"Mg(2+)","range":{"end":780,"start":780}},{"assigned_by":"UniProtKB","ligand":"Mg(2+)","range":{"end":793,"start":793}}],"coiled_coil_coords":[{"range":{"end":28,"start":8}},{"range":{"end":65,"start":38}},{"range":{"end":161,"start":141}}],"cv_annotations":{"biological_process":[{"annotations":[91125],"is_not":false,"summary":null,"term":"GO:1903139"},{"annotations":[91126],"is_not":false,"summary":null,"term":"GO:1903617"},{"annotations":[91127],"is_not":false,"summary":null,"term":"GO:0090334"}],"cellular_component":[{"annotations":[91118],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[91120],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91121],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[91123],"is_not":false,"summary":null,"term":"GO:0120105"},{"annotations":[75581],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[63614],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[91129],"is_not":false,"summary":null,"term":"GO:0004699"},{"annotations":[91130],"is_not":false,"summary":null,"term":"GO:0008289"},{"annotations":[63617],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[86181],"is_not":false,"summary":null,"term":"MONDO:8000024"}],"multi_locus_phenotype":[{"annotations":[119791],"is_not":false,"summary":null,"term":"FYPO:0007780"}],"single_locus_phenotype":[{"annotations":[119783],"is_not":false,"summary":null,"term":"FYPO:0007775"},{"annotations":[119784],"is_not":false,"summary":null,"term":"FYPO:0007779"},{"annotations":[119782],"is_not":false,"summary":null,"term":"FYPO:0001038"},{"annotations":[119780],"is_not":false,"summary":null,"term":"FYPO:0005152"},{"annotations":[119781],"is_not":false,"summary":null,"term":"FYPO:0007522"}]},"dbxrefs":["InterPro:IPR000008","InterPro:IPR035892","InterPro:IPR011072","InterPro:IPR000719","InterPro:IPR008271","EnsemblGenomes-Tr:EEB06734","InterPro:IPR036274","InterPro:IPR000961","EnsemblGenomes-Gn:SJAG_01787","GOA:B6JYW6","InterPro:IPR002219","InterPro:IPR017441","UniProtKB/TrEMBL:B6JYW6","InterPro:IPR011009","InterPro:IPR017892"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":344,"start":316}}],"feature_publications":[{"reference_uniquename":"PMID:34198697","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"snd302","uniquename":"SJAG_01782"},{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"}],"genes_by_uniquename":{"HGNC:9393":null,"HGNC:9395":null,"HGNC:9399":null,"HGNC:9401":null,"HGNC:9403":null,"HGNC:9410":null,"SJAG_01787":null,"SJAG_04551":null,"SPAC17G8.14c":null,"YBL105C":null},"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck1delta__pmk1delta":{"display_name":"pck1delta pmk1delta","display_uniquename":"pck1delta__pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":909,"start":652}],"match_end":909,"match_start":652,"name":"Pkinase"},{"dbname":"PFAM","description":"Phorbol esters/diacylglycerol binding domain (C1 domain)","id":"PF00130","interpro_description":"Protein kinase C-like, phorbol ester/diacylglycerol-binding domain","interpro_id":"IPR002219","interpro_name":"PE/DAG-bd","locations":[{"end":452,"start":404},{"end":525,"start":474}],"match_end":525,"match_start":404,"name":"C1_1"},{"dbname":"PFAM","description":"Hr1 repeat","id":"PF02185","interpro_description":"HR1 rho-binding domain","interpro_id":"IPR011072","interpro_name":"HR1_rho-bd","locations":[{"end":65,"start":8}],"match_end":65,"match_start":8,"name":"HR1"},{"dbname":"PFAM","description":"Protein kinase C terminal domain","id":"PF00433","interpro_description":"Protein kinase, C-terminal","interpro_id":"IPR017892","interpro_name":"Pkinase_C","locations":[{"end":969,"start":931}],"match_end":969,"match_start":931,"name":"Pkinase_C"},{"dbname":"CDD","description":"C1_ScPKC1-like_rpt1","id":"cd20822","locations":[{"end":454,"start":403}],"match_end":454,"match_start":403,"name":"C1_ScPKC1-like_rpt1"},{"dbname":"CDD","description":"C1_ScPKC1-like_rpt2","id":"cd20823","locations":[{"end":528,"start":470}],"match_end":528,"match_start":470,"name":"C1_ScPKC1-like_rpt2"},{"dbname":"CDD","description":"STKc_PKC","id":"cd05570","locations":[{"end":969,"start":654}],"match_end":969,"match_start":654,"name":"STKc_PKC"},{"dbname":"CDD","description":"HR1_PKC-like_1_fungi","id":"cd11621","locations":[{"end":73,"start":2}],"match_end":73,"match_start":2,"name":"HR1_PKC-like_1_fungi"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":783,"start":771}],"match_end":783,"match_start":771,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger phorbol-ester/DAG-type signature.","id":"PS00479","interpro_description":"Protein kinase C-like, phorbol ester/diacylglycerol-binding domain","interpro_id":"IPR002219","interpro_name":"PE/DAG-bd","locations":[{"end":523,"start":474}],"match_end":523,"match_start":474,"name":"ZF_DAG_PE_1"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":688,"start":656}],"match_end":688,"match_start":656,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger phorbol-ester/DAG-type profile.","id":"PS50081","interpro_description":"Protein kinase C-like, phorbol ester/diacylglycerol-binding domain","interpro_id":"IPR002219","interpro_name":"PE/DAG-bd","locations":[{"end":451,"start":403},{"end":523,"start":473}],"match_end":523,"match_start":403,"name":"ZF_DAG_PE_2"},{"dbname":"PROSITE_PROFILES","description":"AGC-kinase C-terminal domain profile.","id":"PS51285","interpro_description":"AGC-kinase, C-terminal","interpro_id":"IPR000961","interpro_name":"AGC-kinase_C","locations":[{"end":976,"start":910}],"match_end":976,"match_start":910,"name":"AGC_KINASE_CTER"},{"dbname":"PROSITE_PROFILES","description":"REM-1 domain profile.","id":"PS51860","interpro_description":"HR1 rho-binding domain","interpro_id":"IPR011072","interpro_name":"HR1_rho-bd","locations":[{"end":68,"start":1}],"match_end":68,"match_start":1,"name":"REM_1"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":909,"start":650}],"match_end":909,"match_start":650,"name":"PROTEIN_KINASE_DOM"},{"dbname":"PROSITE_PROFILES","description":"C2 domain profile.","id":"PS50004","interpro_description":"C2 domain","interpro_id":"IPR000008","interpro_name":"C2_dom","locations":[{"end":306,"start":178}],"match_end":306,"match_start":178,"name":"C2"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":909,"start":650}],"match_end":909,"match_start":650,"name":"serkin_6"},{"dbname":"SMART","id":"SM00109","interpro_description":"Protein kinase C-like, phorbol ester/diacylglycerol-binding domain","interpro_id":"IPR002219","interpro_name":"PE/DAG-bd","locations":[{"end":451,"start":404},{"end":523,"start":474}],"match_end":523,"match_start":404,"name":"c1_12"},{"dbname":"SMART","id":"SM00239","interpro_description":"C2 domain","interpro_id":"IPR000008","interpro_name":"C2_dom","locations":[{"end":298,"start":202}],"match_end":298,"match_start":202,"name":"C2_3c"},{"dbname":"SMART","id":"SM00742","interpro_description":"HR1 rho-binding domain","interpro_id":"IPR011072","interpro_name":"HR1_rho-bd","locations":[{"end":69,"start":6},{"end":179,"start":115}],"match_end":179,"match_start":6,"name":"hr1_7"},{"dbname":"SMART","id":"SM00133","interpro_description":"AGC-kinase, C-terminal","interpro_id":"IPR000961","interpro_name":"AGC-kinase_C","locations":[{"end":972,"start":910}],"match_end":972,"match_start":910,"name":"pkinase_C_6"},{"dbname":"FUNFAM","description":"Serine/threonine-protein kinase N2-like","id":"G3DSA:3.30.200.20:FF:000474","locations":[{"end":739,"start":647}],"match_end":739,"match_start":647},{"dbname":"FUNFAM","description":"Protein kinase C, theta","id":"G3DSA:1.10.510.10:FF:000150","locations":[{"end":940,"start":736}],"match_end":940,"match_start":736},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":964,"start":646}],"match_end":964,"match_start":646,"name":"Protein kinase-like (PK-like)"},{"dbname":"SUPERFAMILY","id":"SSF49562","interpro_description":"C2 domain superfamily","interpro_id":"IPR035892","interpro_name":"C2_domain_sf","locations":[{"end":291,"start":197},{"end":370,"start":346}],"match_end":370,"match_start":197,"name":"C2 domain (Calcium/lipid-binding domain, CaLB)"},{"dbname":"SUPERFAMILY","id":"SSF57889","interpro_description":"C1-like domain superfamily","interpro_id":"IPR046349","interpro_name":"C1-like_sf","locations":[{"end":453,"start":399},{"end":526,"start":466}],"match_end":526,"match_start":399,"name":"Cysteine-rich domain"},{"dbname":"SUPERFAMILY","id":"SSF46585","interpro_description":"HR1 repeat superfamily","interpro_id":"IPR036274","interpro_name":"HR1_rpt_sf","locations":[{"end":180,"start":117}],"match_end":180,"match_start":117,"name":"HR1 repeat"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":940,"start":736}],"match_end":940,"match_start":736,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.150","interpro_description":"C2 domain superfamily","interpro_id":"IPR035892","interpro_name":"C2_domain_sf","locations":[{"end":296,"start":197},{"end":373,"start":351}],"match_end":373,"match_start":197,"name":"C2 domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":735,"start":647},{"end":966,"start":941}],"match_end":966,"match_start":647,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.60.20","locations":[{"end":454,"start":385},{"end":541,"start":465}],"match_end":541,"match_start":385},{"dbname":"PANTHER","id":"PTHR24351","locations":[{"end":970,"start":642}],"match_end":970,"match_start":642,"name":"RIBOSOMAL PROTEIN S6 KINASE"},{"dbname":"PIRSF","id":"PIRSF000615","locations":[{"end":260,"start":42},{"end":893,"start":642}],"match_end":893,"match_start":42,"name":"TyrPK_CSF1-R"},{"dbname":"COILS","id":"Coil","locations":[{"end":28,"start":8},{"end":65,"start":38},{"end":161,"start":141}],"match_end":161,"match_start":8,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":344,"start":316}],"match_end":344,"match_start":316,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":334,"start":322}],"match_end":334,"match_start":322,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2357770,"start_pos":2354840,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":96,"start":80}},{"range":{"end":559,"start":548}},{"range":{"end":613,"start":591}}],"name":"pck1","ortholog_annotations":[{"gene_uniquename":"SJAG_01787","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9393","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9395","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9399","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9401","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9403","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9410","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G8.14c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":4932,"ortholog_uniquename":"YBL105C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01787","ortholog_taxonid":4932,"ortholog_uniquename":"YBL105C","reference_uniquename":"PMID:26896847"}],"product":"protein kinase C (PKC)-like Pck1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:34198697":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0005524","GO:0008289"],"not-binding":["GO:0004699"]},"multi_locus_phenotype":{"cell_phenotype":["FYPO:0007780"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0001038","FYPO:0007775","FYPO:0007779"],"population_phenotype":["FYPO:0005152","FYPO:0007522"]}},"subset_termids":["FYPO:0001320","GO:0005829","MONDO:0005046","FYPO:0002274","FYPO:0002682","GO:0000935","GO:0140096","FYPO:0002683","GO:0070938","GO:0071554","GO:0005634","GO:0005938","GO:0016301","GO:0000281","GO:0005975","FYPO:0002494","GO:0004672","GO:0008289","FYPO:0000139","GO:0023052","GO:0015629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000314":null,"FYPO:0001038":null,"FYPO:0005152":null,"FYPO:0007522":null,"FYPO:0007775":null,"FYPO:0007779":null,"FYPO:0007780":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000935":null,"GO:0004699":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0008270":null,"GO:0008289":null,"GO:0051285":null,"GO:0090334":null,"GO:0120105":null,"GO:1903139":null,"GO:1903617":null,"MONDO:8000024":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01787.1"],"transcripts_by_uniquename":{"SJAG_01787.1":null},"uniprot_identifier":"B6JYW6","uniquename":"SJAG_01787"}


id: SJAG_01788
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[93809],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93810],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01788","EnsemblGenomes-Tr:EEB06735","UniProtKB/TrEMBL:B6JYW7","InterPro:IPR027915"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atg1801","uniquename":"SJAG_01783"},{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"}],"genes_by_uniquename":{"SJAG_01788":null,"SPAC22H10.02":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Domain of unknown function (DUF4452)","id":"PF14618","interpro_description":"Protein of unknown function DUF4452","interpro_id":"IPR027915","interpro_name":"DUF4452","locations":[{"end":136,"start":20}],"match_end":136,"match_start":20,"name":"DUF4452"},{"dbname":"PANTHER","id":"PTHR39615","interpro_description":"Protein of unknown function DUF4452","interpro_id":"IPR027915","interpro_name":"DUF4452","locations":[{"end":140,"start":8}],"match_end":140,"match_start":8,"name":"YALI0E17897P"}],"location":{"chromosome_name":"supercont5.3","end_pos":2358987,"start_pos":2358431,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":15,"start":6}},{"range":{"end":74,"start":57}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01788","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22H10.02","reference_uniquename":"PMID:21511999"}],"product":"DUF4452 family conserved fungal protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01788.1"],"transcripts_by_uniquename":{"SJAG_01788.1":null},"uniprot_identifier":"B6JYW7","uniquename":"SJAG_01788"}


id: SJAG_01789
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78840],"is_not":false,"summary":null,"term":"GO:0006606"}],"cellular_component":[{"annotations":[78839],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[78838],"is_not":false,"summary":null,"term":"GO:0005635"}],"molecular_function":[{"annotations":[93815],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[93816],"is_not":false,"summary":null,"term":"GO:0061608"},{"annotations":[67827],"is_not":false,"summary":null,"term":"GO:0031267"}]},"dbxrefs":["InterPro:IPR001494","UniProtKB/TrEMBL:B6JYW8","InterPro:IPR011989","InterPro:IPR016024","EnsemblGenomes-Tr:EEB06736","EnsemblGenomes-Gn:SJAG_01789","GOA:B6JYW8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"uge1","uniquename":"SJAG_01784"},{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"}],"genes_by_uniquename":{"HGNC:19425":null,"SJAG_01789":null,"SPAC22H10.03c":null,"YGL241W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Importin-9 central HEAT repeats","id":"PF25018","interpro_description":"Importin-9, central HEAT repeats","interpro_id":"IPR056840","interpro_name":"HEAT_IPO9_central","locations":[{"end":588,"start":350}],"match_end":588,"match_start":350,"name":"HEAT_IPO9_c"},{"dbname":"PFAM","description":"Importin-beta N-terminal domain","id":"PF03810","interpro_description":"Importin-beta, N-terminal domain","interpro_id":"IPR001494","interpro_name":"Importin-beta_N","locations":[{"end":92,"start":20}],"match_end":92,"match_start":20,"name":"IBN_N"},{"dbname":"PROSITE_PROFILES","description":"Importin-beta N-terminal domain profile.","id":"PS50166","interpro_description":"Importin-beta, N-terminal domain","interpro_id":"IPR001494","interpro_name":"Importin-beta_N","locations":[{"end":94,"start":19}],"match_end":94,"match_start":19,"name":"IMPORTIN_B_NT"},{"dbname":"SMART","id":"SM00913","interpro_description":"Importin-beta, N-terminal domain","interpro_id":"IPR001494","interpro_name":"Importin-beta_N","locations":[{"end":94,"start":19}],"match_end":94,"match_start":19,"name":"IBN_N_2"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":839,"start":4},{"end":984,"start":872}],"match_end":984,"match_start":4,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":985,"start":1}],"match_end":985,"match_start":1},{"dbname":"PANTHER","id":"PTHR10997","locations":[{"end":978,"start":1}],"match_end":978,"match_start":1,"name":"IMPORTIN-7, 8, 11"}],"location":{"chromosome_name":"supercont5.3","end_pos":2363411,"start_pos":2359941,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":156,"start":145}},{"range":{"end":235,"start":215}},{"range":{"end":864,"start":851}}],"name":"kap114","ortholog_annotations":[{"gene_uniquename":"SJAG_01789","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19425","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01789","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22H10.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01789","ortholog_taxonid":4932,"ortholog_uniquename":"YGL241W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01789","ortholog_taxonid":4932,"ortholog_uniquename":"YGL241W","reference_uniquename":"PMID:26896847"}],"product":"karyopherin/importin beta family nuclear import signal receptor Kap14","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525","GO:0031267"],"not-binding":["GO:0061608"]}},"subset_termids":["GO:0140104","GO:0140142","GO:0005634","GO:0006913","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005525":null,"GO:0005635":null,"GO:0005829":null,"GO:0006606":null,"GO:0031267":null,"GO:0061608":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01789.1"],"transcripts_by_uniquename":{"SJAG_01789.1":null},"uniprot_identifier":"B6JYW8","uniquename":"SJAG_01789"}


id: SJAG_01790
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75009],"is_not":false,"summary":null,"term":"GO:0061509"},{"annotations":[93820],"is_not":false,"summary":null,"term":"GO:0031030"}],"cellular_component":[{"annotations":[75008],"is_not":false,"summary":null,"term":"GO:0090443"},{"annotations":[93818],"is_not":false,"summary":null,"term":"GO:0044732"}],"molecular_function":[{"annotations":[75007],"is_not":false,"summary":null,"term":"GO:0004722"}],"mondo":[{"annotations":[86621],"is_not":false,"summary":null,"term":"MONDO:0032642"},{"annotations":[85581],"is_not":false,"summary":null,"term":"MONDO:0020630"}]},"dbxrefs":["InterPro:IPR006186","EnsemblGenomes-Tr:EEB06737","GOA:B6JYW9","EnsemblGenomes-Gn:SJAG_01790","InterPro:IPR004843","InterPro:IPR029052","UniProtKB/TrEMBL:B6JYW9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"csi2","uniquename":"SJAG_01785"},{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"}],"genes_by_uniquename":{"HGNC:9314":null,"HGNC:9315":null,"HGNC:9316":null,"SJAG_01790":null,"SPAC22H10.04":null,"YNR032W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Calcineurin-like phosphoesterase","id":"PF00149","interpro_description":"Calcineurin-like phosphoesterase domain, ApaH type","interpro_id":"IPR004843","interpro_name":"Calcineurin-like_PHP_ApaH","locations":[{"end":238,"start":45}],"match_end":238,"match_start":45,"name":"Metallophos"},{"dbname":"CDD","description":"MPP_PP2A_PP4_PP6","id":"cd07415","locations":[{"end":288,"start":3}],"match_end":288,"match_start":3,"name":"MPP_PP2A_PP4_PP6"},{"dbname":"PROSITE_PATTERNS","description":"Serine/threonine specific protein phosphatases signature.","id":"PS00125","interpro_description":"Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase","interpro_id":"IPR006186","interpro_name":"Ser/Thr-sp_prot-phosphatase","locations":[{"end":113,"start":108}],"match_end":113,"match_start":108,"name":"SER_THR_PHOSPHATASE"},{"dbname":"SMART","id":"SM00156","interpro_description":"Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase","interpro_id":"IPR006186","interpro_name":"Ser/Thr-sp_prot-phosphatase","locations":[{"end":288,"start":17}],"match_end":288,"match_start":17,"name":"pp2a_7"},{"dbname":"PRINTS","description":"Serine/threonine phosphatase family signature","id":"PR00114","interpro_description":"Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase","interpro_id":"IPR006186","interpro_name":"Ser/Thr-sp_prot-phosphatase","locations":[{"end":72,"start":45},{"end":101,"start":74},{"end":131,"start":107},{"end":168,"start":142},{"end":198,"start":171},{"end":248,"start":228},{"end":266,"start":250}],"match_end":266,"match_start":45,"name":"STPHPHTASE"},{"dbname":"SUPERFAMILY","id":"SSF56300","interpro_description":"Metallo-dependent phosphatase-like","interpro_id":"IPR029052","interpro_name":"Metallo-depent_PP-like","locations":[{"end":291,"start":2}],"match_end":291,"match_start":2,"name":"Metallo-dependent phosphatases"},{"dbname":"GENE3D","id":"G3DSA:3.60.21.10","interpro_description":"Metallo-dependent phosphatase-like","interpro_id":"IPR029052","interpro_name":"Metallo-depent_PP-like","locations":[{"end":301,"start":1}],"match_end":301,"match_start":1},{"dbname":"PANTHER","id":"PTHR45619","interpro_description":"Serine/Threonine protein phosphatase PP2A-like","interpro_id":"IPR047129","interpro_name":"PPA2-like","locations":[{"end":313,"start":2}],"match_end":313,"match_start":2,"name":"SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2365018,"start_pos":2363762,"strand":"forward"},"name":"ppa3","ortholog_annotations":[{"gene_uniquename":"SJAG_01790","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9314","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01790","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9315","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01790","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9316","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01790","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22H10.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01790","ortholog_taxonid":4932,"ortholog_uniquename":"YNR032W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01790","ortholog_taxonid":4932,"ortholog_uniquename":"YNR032W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004722"]}},"subset_termids":["GO:0140096","GO:0005816","GO:0016788","GO:0015630","MONDO:0700092","GO:0023052","MONDO:0005027","GO:0004721"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004722":null,"GO:0031030":null,"GO:0044732":null,"GO:0061509":null,"GO:0090443":null,"MONDO:0020630":null,"MONDO:0032642":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01790.1"],"transcripts_by_uniquename":{"SJAG_01790.1":null},"uniprot_identifier":"B6JYW9","uniquename":"SJAG_01790"}


id: SJAG_01791
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":11,"start":11}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":49,"start":49}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":123,"start":118}}],"cv_annotations":{"biological_process":[{"annotations":[93826],"is_not":false,"summary":null,"term":"GO:0180010"},{"annotations":[78291],"is_not":false,"summary":null,"term":"GO:0006388"}],"cellular_component":[{"annotations":[93823],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93824],"is_not":false,"summary":null,"term":"GO:0005848"}],"molecular_function":[{"annotations":[67040],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[93829],"is_not":false,"summary":null,"term":"GO:0051736"}],"mondo":[{"annotations":[86760],"is_not":false,"summary":null,"term":"MONDO:0014349"}]},"dbxrefs":["InterPro:IPR038239","EnsemblGenomes-Tr:EEB06738","InterPro:IPR010655","InterPro:IPR028606","UniProtKB/TrEMBL:B6JYX0","GOA:B6JYX0","EnsemblGenomes-Gn:SJAG_01791","InterPro:IPR038238","InterPro:IPR032319","InterPro:IPR027417","InterPro:IPR032324"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"met8","uniquename":"SJAG_01786"},{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"}],"genes_by_uniquename":{"HGNC:16999":null,"SJAG_01791":null,"SPAC22H10.05c":null,"YOR250C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"N-terminal beta-sandwich domain of polyadenylation factor","id":"PF16573","interpro_description":"Clp1, N-terminal beta-sandwich domain","interpro_id":"IPR032324","interpro_name":"Clp1_N","locations":[{"end":94,"start":5}],"match_end":94,"match_start":5,"name":"CLP1_N"},{"dbname":"PFAM","description":"Pre-mRNA cleavage complex II protein Clp1","id":"PF06807","interpro_description":"Pre-mRNA cleavage complex subunit Clp1, C-terminal","interpro_id":"IPR010655","interpro_name":"Clp1_C","locations":[{"end":465,"start":323}],"match_end":465,"match_start":323,"name":"Clp1"},{"dbname":"PFAM","description":"mRNA cleavage and polyadenylation factor CLP1 P-loop","id":"PF16575","interpro_description":"Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain","interpro_id":"IPR032319","interpro_name":"CLP1_P","locations":[{"end":317,"start":115}],"match_end":317,"match_start":115,"name":"CLP1_P"},{"dbname":"FUNFAM","description":"Protein CLP1 homolog 5","id":"G3DSA:2.60.120.1030:FF:000001","locations":[{"end":75,"start":1}],"match_end":75,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":155,"start":107},{"end":271,"start":230}],"match_end":271,"match_start":107,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:2.60.120.1030","interpro_description":"Clp1, N-terminal beta-sandwich domain superfamily","interpro_id":"IPR038239","interpro_name":"Clp1_N_sf","locations":[{"end":75,"start":1}],"match_end":75,"match_start":1,"name":"Clp1, DNA binding domain"},{"dbname":"GENE3D","id":"G3DSA:2.40.30.330","interpro_description":"Clp1, C-terminal domain superfamily","interpro_id":"IPR038238","interpro_name":"Clp1_C_sf","locations":[{"end":466,"start":325}],"match_end":466,"match_start":325},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":323,"start":78}],"match_end":323,"match_start":78},{"dbname":"PANTHER","id":"PTHR12755","interpro_description":"Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3","interpro_id":"IPR045116","interpro_name":"Clp1/Grc3","locations":[{"end":466,"start":8}],"match_end":466,"match_start":8,"name":"CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P"},{"dbname":"HAMAP","description":"Polyribonucleotide 5'-hydroxyl-kinase Clp1 [CLP1].","id":"MF_03035","interpro_description":"Polyribonucleotide 5-hydroxyl-kinase Clp1","interpro_id":"IPR028606","interpro_name":"Clp1","locations":[{"end":465,"start":1}],"match_end":465,"match_start":1,"name":"Clp1"}],"location":{"chromosome_name":"supercont5.3","end_pos":2366542,"start_pos":2365078,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01791","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16999","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01791","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22H10.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01791","ortholog_taxonid":4932,"ortholog_uniquename":"YOR250C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01791","ortholog_taxonid":4932,"ortholog_uniquename":"YOR250C","reference_uniquename":"PMID:26896847"}],"product":"mRNA cleavage and polyadenylation specificity factor complex polyribonucleotide 5'-hydroxyl-kinase subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0051736"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0006399","GO:0016301","GO:0016071","MONDO:0020022"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005829":null,"GO:0005848":null,"GO:0006388":null,"GO:0051736":null,"GO:0180010":null,"MONDO:0014349":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01791.1"],"transcripts_by_uniquename":{"SJAG_01791.1":null},"uniprot_identifier":"B6JYX0","uniquename":"SJAG_01791"}


id: SJAG_01794
data:
  {"alleles_by_uniquename":{"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"cv_annotations":{"biological_process":[{"annotations":[93838],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[93839],"is_not":false,"summary":null,"term":"GO:1902917"},{"annotations":[93841],"is_not":false,"summary":null,"term":"GO:0032878"}],"cellular_component":[{"annotations":[93830],"is_not":false,"summary":null,"term":"GO:0071521"},{"annotations":[93831],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[93833],"is_not":false,"summary":null,"term":"GO:0090726"},{"annotations":[93834],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[79055],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[93836],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[93837],"is_not":false,"summary":null,"term":"GO:0031520"}],"molecular_function":[{"annotations":[68043],"is_not":false,"summary":null,"term":"GO:0035091"},{"annotations":[79057],"is_not":false,"summary":null,"term":"GO:0030674"}],"mondo":[{"annotations":[85818],"is_not":false,"summary":null,"term":"MONDO:0009579"}],"single_locus_phenotype":[{"annotations":[119811],"is_not":false,"summary":null,"term":"FYPO:0007789"},{"annotations":[119810],"is_not":false,"summary":null,"term":"FYPO:0001355"},{"annotations":[119809],"is_not":false,"summary":null,"term":"FYPO:0000280"},{"annotations":[119808],"is_not":false,"summary":null,"term":"FYPO:0002380"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYX1","InterPro:IPR030507","InterPro:IPR000270","InterPro:IPR035549","EnsemblGenomes-Gn:SJAG_01794","InterPro:IPR036871","EnsemblGenomes-Tr:EEB06739","InterPro:IPR001452","GOA:B6JYX1","InterPro:IPR001683","InterPro:IPR035548","InterPro:IPR035550","InterPro:IPR036028"],"deletion_viability":"viable","disordered_region_coords":[{"range":{"end":116,"start":96}},{"range":{"end":255,"start":225}}],"feature_publications":[{"reference_uniquename":"PMID:29566183","source":"canto"},{"reference_uniquename":"PMID:30664646","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pck1","uniquename":"SJAG_01787"},{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"}],"genes_by_uniquename":{"HGNC:23664":null,"HGNC:29242":null,"SJAG_01794":null,"SJAG_04280":null,"SPAC22H10.07":null,"YBR200W":null},"genotypes_by_uniquename":{"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SH3 domain","id":"PF00018","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":78,"start":30},{"end":172,"start":125}],"match_end":172,"match_start":30,"name":"SH3_1"},{"dbname":"PFAM","description":"PX domain","id":"PF00787","interpro_description":"Phox homology","interpro_id":"IPR001683","interpro_name":"PX_dom","locations":[{"end":400,"start":315}],"match_end":400,"match_start":315,"name":"PX"},{"dbname":"CDD","description":"PX_Bem1p","id":"cd06890","interpro_description":"Bem1/Scd2, PX domain","interpro_id":"IPR035550","interpro_name":"Bem1/Scd2_PX","locations":[{"end":403,"start":295}],"match_end":403,"match_start":295,"name":"PX_Bem1p"},{"dbname":"CDD","description":"SH3_Bem1p_2","id":"cd11879","interpro_description":"Bem1/Scd2, SH3 domain 2","interpro_id":"IPR035549","interpro_name":"Bem1/Scd2_SH3_2","locations":[{"end":178,"start":123}],"match_end":178,"match_start":123,"name":"SH3_Bem1p_2"},{"dbname":"CDD","description":"SH3_Bem1p_1","id":"cd11878","interpro_description":"Bem1/Scd2, SH3 domain 1","interpro_id":"IPR035548","interpro_name":"Bem1/Scd2_SH3_1","locations":[{"end":81,"start":28}],"match_end":81,"match_start":28,"name":"SH3_Bem1p_1"},{"dbname":"CDD","description":"PB1","id":"cd05992","locations":[{"end":522,"start":452}],"match_end":522,"match_start":452,"name":"PB1"},{"dbname":"PROSITE_PROFILES","description":"Src homology 3 (SH3) domain profile.","id":"PS50002","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":86,"start":24},{"end":181,"start":119}],"match_end":181,"match_start":24,"name":"SH3"},{"dbname":"PROSITE_PROFILES","description":"PX domain profile.","id":"PS50195","interpro_description":"Phox homology","interpro_id":"IPR001683","interpro_name":"PX_dom","locations":[{"end":407,"start":287}],"match_end":407,"match_start":287,"name":"PX"},{"dbname":"PROSITE_PROFILES","description":"PB1 domain profile.","id":"PS51745","interpro_description":"PB1-like domain","interpro_id":"IPR053793","interpro_name":"PB1-like","locations":[{"end":529,"start":451}],"match_end":529,"match_start":451,"name":"PB1"},{"dbname":"SMART","id":"SM00312","interpro_description":"Phox homology","interpro_id":"IPR001683","interpro_name":"PX_dom","locations":[{"end":403,"start":289}],"match_end":403,"match_start":289,"name":"PX_2"},{"dbname":"SMART","id":"SM00326","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":85,"start":27},{"end":180,"start":122}],"match_end":180,"match_start":27,"name":"SH3_2"},{"dbname":"SMART","id":"SM00666","interpro_description":"PB1 domain","interpro_id":"IPR000270","interpro_name":"PB1_dom","locations":[{"end":526,"start":451}],"match_end":526,"match_start":451,"name":"PB1_new"},{"dbname":"PRINTS","description":"SH3 domain signature","id":"PR00452","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":37,"start":27},{"end":56,"start":41},{"end":84,"start":72}],"match_end":84,"match_start":27,"name":"SH3DOMAIN"},{"dbname":"FUNFAM","description":"Protein kinase activator Bem1","id":"G3DSA:2.30.30.40:FF:000093","locations":[{"end":208,"start":122}],"match_end":208,"match_start":122},{"dbname":"SUPERFAMILY","id":"SSF54277","locations":[{"end":521,"start":442}],"match_end":521,"match_start":442,"name":"CAD & PB1 domains"},{"dbname":"SUPERFAMILY","id":"SSF50044","interpro_description":"SH3-like domain superfamily","interpro_id":"IPR036028","interpro_name":"SH3-like_dom_sf","locations":[{"end":86,"start":19},{"end":179,"start":94}],"match_end":179,"match_start":19,"name":"SH3-domain"},{"dbname":"SUPERFAMILY","id":"SSF64268","interpro_description":"PX domain superfamily","interpro_id":"IPR036871","interpro_name":"PX_dom_sf","locations":[{"end":408,"start":295}],"match_end":408,"match_start":295,"name":"PX domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.1520.10","interpro_description":"PX domain superfamily","interpro_id":"IPR036871","interpro_name":"PX_dom_sf","locations":[{"end":415,"start":278}],"match_end":415,"match_start":278},{"dbname":"GENE3D","id":"G3DSA:2.30.30.40","locations":[{"end":97,"start":19},{"end":208,"start":122}],"match_end":208,"match_start":19,"name":"SH3 Domains"},{"dbname":"GENE3D","id":"G3DSA:3.10.20.90","locations":[{"end":523,"start":440}],"match_end":523,"match_start":440},{"dbname":"PANTHER","id":"PTHR15706","interpro_description":"NADPH Oxidase and PX Domain-Containing","interpro_id":"IPR051228","interpro_name":"NADPH_Oxidase/PX-Domain","locations":[{"end":226,"start":29}],"match_end":226,"match_start":29,"name":"SH3 MULTIPLE DOMAIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":116,"start":96},{"end":255,"start":225}],"match_end":255,"match_start":96,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":115,"start":104},{"end":255,"start":230}],"match_end":255,"match_start":104,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2371219,"start_pos":2369630,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":172,"start":160}}],"name":"scd2","ortholog_annotations":[{"gene_uniquename":"SJAG_01794","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23664","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01794","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29242","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01794","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22H10.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01794","ortholog_taxonid":4932,"ortholog_uniquename":"YBR200W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01794","ortholog_taxonid":4932,"ortholog_uniquename":"YBR200W","reference_uniquename":"PMID:26896847"}],"product":"Cdc42 GTPase complex scaffold subunit Scd2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29566183":null,"PMID:29761456":null,"PMID:30664646":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0035091"],"not-binding":["GO:0030674"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0002380","FYPO:0007789","FYPO:0000280"],"population_phenotype":["FYPO:0001355"]}},"subset_termids":["FYPO:0000005","FYPO:0000139","FYPO:0000301","GO:0060090","FYPO:0001320","GO:0008289","GO:0005634","FYPO:0002058","GO:0005938","GO:0005886","GO:0007163","GO:0005829"],"target_of_annotations":[{"assigned_by":"JaponicusDB","date":"2021-06-30","evidence":"Microscopy","ext_rel_display_name":"affected by mutation in","gene":"SJAG_04280","genotype_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:30664646","show_in_summary":true}],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000280":null,"FYPO:0001355":null,"FYPO:0002380":null,"FYPO:0007789":null,"GO:0005634":null,"GO:0005829":null,"GO:0030010":null,"GO:0030674":null,"GO:0031520":null,"GO:0032153":null,"GO:0032878":null,"GO:0035091":null,"GO:0043332":null,"GO:0071521":null,"GO:0090726":null,"GO:1902917":null,"MONDO:0009579":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01794.1"],"transcripts_by_uniquename":{"SJAG_01794.1":null},"uniprot_identifier":"B6JYX1","uniquename":"SJAG_01794"}


id: SJAG_01795
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[94069],"is_not":false,"summary":null,"term":"GO:0000329"}],"molecular_function":[{"annotations":[94070],"is_not":false,"summary":null,"term":"GO:0016787"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01795","UniProtKB/TrEMBL:B6JYX2","GOA:B6JYX2","InterPro:IPR000073","InterPro:IPR029058","InterPro:IPR019431","EnsemblGenomes-Tr:EEB06740"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01788"},{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"}],"genes_by_uniquename":{"SJAG_01795":null,"SPAC23C11.06c":null,"YNL115C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Alpha/beta hydrolase family","id":"PF12697","interpro_description":"Alpha/beta hydrolase fold-1","interpro_id":"IPR000073","interpro_name":"AB_hydrolase_1","locations":[{"end":505,"start":296}],"match_end":505,"match_start":296,"name":"Abhydrolase_6"},{"dbname":"PFAM","description":"Region of unknown function (DUF2417)","id":"PF10329","interpro_description":"Protein of unknown function DUF2417","interpro_id":"IPR019431","interpro_name":"DUF2417","locations":[{"end":235,"start":13}],"match_end":235,"match_start":13,"name":"DUF2417"},{"dbname":"SUPERFAMILY","id":"SSF53474","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":267,"start":229},{"end":505,"start":294}],"match_end":505,"match_start":229,"name":"alpha/beta-Hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1820","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":519,"start":216}],"match_end":519,"match_start":216,"name":"alpha/beta hydrolase"}],"location":{"chromosome_name":"supercont5.3","end_pos":2373505,"start_pos":2371943,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":97,"start":84}},{"range":{"end":124,"start":110}},{"range":{"end":153,"start":142}},{"range":{"end":207,"start":200}},{"range":{"end":350,"start":333}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01795","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01795","ortholog_taxonid":4932,"ortholog_uniquename":"YNL115C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01795","ortholog_taxonid":4932,"ortholog_uniquename":"YNL115C","reference_uniquename":"PMID:26896847"}],"product":"vacuolar membrane hydrolase, implicted in protein catabolism or lipid metabolism","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016787"]}},"subset_termids":["GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0016787":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":68,"start":46}},{"assigned_by":"TMHMM","range":{"end":97,"start":75}},{"assigned_by":"TMHMM","range":{"end":129,"start":107}},{"assigned_by":"TMHMM","range":{"end":158,"start":136}},{"assigned_by":"TMHMM","range":{"end":207,"start":185}},{"assigned_by":"TMHMM","range":{"end":406,"start":388}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01795.1"],"transcripts_by_uniquename":{"SJAG_01795.1":null},"uniprot_identifier":"B6JYX2","uniquename":"SJAG_01795"}


id: SJAG_01797
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":605,"start":605}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":609,"start":609}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":724,"start":724}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":728,"start":728}}],"cv_annotations":{"biological_process":[{"annotations":[64423],"is_not":false,"summary":null,"term":"GO:0106074"},{"annotations":[94080],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[94081],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[94078],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94079],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[76226],"is_not":false,"summary":null,"term":"GO:0004813"},{"annotations":[76228],"is_not":false,"summary":null,"term":"GO:0002161"},{"annotations":[64413],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[64414],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[64420],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[86838],"is_not":false,"summary":null,"term":"MONDO:0013212"},{"annotations":[86330],"is_not":false,"summary":null,"term":"MONDO:0013570"},{"annotations":[85620],"is_not":false,"summary":null,"term":"MONDO:0014593"},{"annotations":[86428],"is_not":false,"summary":null,"term":"MONDO:0030634"},{"annotations":[86806],"is_not":false,"summary":null,"term":"MONDO:0014387"},{"annotations":[86461],"is_not":false,"summary":null,"term":"MONDO:0030517"}]},"dbxrefs":["InterPro:IPR002318","InterPro:IPR023033","InterPro:IPR018164","EnsemblGenomes-Tr:EEB06743","InterPro:IPR012947","InterPro:IPR009000","InterPro:IPR003156","UniProtKB/TrEMBL:B6JYX5","InterPro:IPR018162","EnsemblGenomes-Gn:SJAG_01797","GOA:B6JYX5","InterPro:IPR018163","InterPro:IPR018165"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"}],"genes_by_uniquename":{"HGNC:20":null,"HGNC:21022":null,"SJAG_01797":null,"SPAC23C11.09":null,"YOR335C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA synthetases class II (A)","id":"PF01411","interpro_description":"Alanyl-tRNA synthetase, class IIc, N-terminal","interpro_id":"IPR018164","interpro_name":"Ala-tRNA-synth_IIc_N","locations":[{"end":595,"start":13}],"match_end":595,"match_start":13,"name":"tRNA-synt_2c"},{"dbname":"PFAM","description":"DHHA1 domain","id":"PF02272","interpro_description":"DHHA1 domain","interpro_id":"IPR003156","interpro_name":"DHHA1_dom","locations":[{"end":956,"start":852}],"match_end":956,"match_start":852,"name":"DHHA1"},{"dbname":"PFAM","description":"Threonyl and Alanyl tRNA synthetase second additional domain","id":"PF07973","interpro_description":"Threonyl/alanyl tRNA synthetase, SAD","interpro_id":"IPR012947","interpro_name":"tRNA_SAD","locations":[{"end":753,"start":695}],"match_end":753,"match_start":695,"name":"tRNA_SAD"},{"dbname":"CDD","description":"AlaRS_core","id":"cd00673","locations":[{"end":258,"start":11}],"match_end":258,"match_start":11,"name":"AlaRS_core"},{"dbname":"PROSITE_PROFILES","description":"Alanyl-transfer RNA synthetases family profile.","id":"PS50860","interpro_description":"Alanyl-tRNA synthetase, class IIc, core domain","interpro_id":"IPR018165","interpro_name":"Ala-tRNA-synth_IIc_core","locations":[{"end":767,"start":9}],"match_end":767,"match_start":9,"name":"AA_TRNA_LIGASE_II_ALA"},{"dbname":"SMART","id":"SM00863","interpro_description":"Threonyl/alanyl tRNA synthetase, SAD","interpro_id":"IPR012947","interpro_name":"tRNA_SAD","locations":[{"end":754,"start":695}],"match_end":754,"match_start":695,"name":"tRNA_SAD_4"},{"dbname":"PRINTS","description":"Alanyl-tRNA synthetase signature","id":"PR00980","interpro_description":"Alanine-tRNA ligase, class IIc","interpro_id":"IPR002318","interpro_name":"Ala-tRNA-lgiase_IIc","locations":[{"end":98,"start":87},{"end":227,"start":216},{"end":256,"start":243},{"end":316,"start":300},{"end":337,"start":324}],"match_end":337,"match_start":87,"name":"TRNASYNTHALA"},{"dbname":"FUNFAM","description":"Alanine--tRNA ligase, cytoplasmic","id":"G3DSA:3.30.930.10:FF:000011","locations":[{"end":259,"start":8}],"match_end":259,"match_start":8},{"dbname":"FUNFAM","description":"Alanine--tRNA ligase","id":"G3DSA:3.10.310.40:FF:000003","locations":[{"end":955,"start":848}],"match_end":955,"match_start":848},{"dbname":"FUNFAM","description":"Alanine--tRNA ligase, cytoplasmic","id":"G3DSA:3.30.980.10:FF:000004","locations":[{"end":769,"start":594}],"match_end":769,"match_start":594},{"dbname":"FUNFAM","description":"Alanine--tRNA ligase","id":"G3DSA:2.40.30.130:FF:000004","locations":[{"end":592,"start":491}],"match_end":592,"match_start":491},{"dbname":"SUPERFAMILY","id":"SSF55186","interpro_description":"Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily","interpro_id":"IPR018163","interpro_name":"Thr/Ala-tRNA-synth_IIc_edit","locations":[{"end":761,"start":597}],"match_end":761,"match_start":597,"name":"ThrRS/AlaRS common domain"},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":591,"start":506}],"match_end":591,"match_start":506,"name":"Translation proteins"},{"dbname":"SUPERFAMILY","id":"SSF101353","interpro_description":"Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily","interpro_id":"IPR018162","interpro_name":"Ala-tRNA-ligase_IIc_anticod-bd","locations":[{"end":476,"start":263}],"match_end":476,"match_start":263,"name":"Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)"},{"dbname":"SUPERFAMILY","id":"SSF55681","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":262,"start":10}],"match_end":262,"match_start":10,"name":"Class II aaRS and biotin synthetases"},{"dbname":"GENE3D","id":"G3DSA:3.30.980.10","locations":[{"end":767,"start":594}],"match_end":767,"match_start":594},{"dbname":"GENE3D","id":"G3DSA:2.40.30.130","locations":[{"end":592,"start":484}],"match_end":592,"match_start":484},{"dbname":"GENE3D","id":"G3DSA:3.30.930.10","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":259,"start":10}],"match_end":259,"match_start":10,"name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"GENE3D","id":"G3DSA:3.10.310.40","locations":[{"end":955,"start":846}],"match_end":955,"match_start":846},{"dbname":"PANTHER","id":"PTHR11777","interpro_description":"Alanine--tRNA ligase","interpro_id":"IPR050058","interpro_name":"Ala-tRNA_ligase","locations":[{"end":955,"start":3}],"match_end":955,"match_start":3,"name":"ALANYL-TRNA SYNTHETASE"},{"dbname":"HAMAP","description":"Alanine--tRNA ligase [alaS].","id":"MF_00036_B","interpro_description":"Alanine-tRNA ligase, eukaryota/bacteria","interpro_id":"IPR023033","interpro_name":"Ala_tRNA_ligase_euk/bac","locations":[{"end":959,"start":1}],"match_end":959,"match_start":1,"name":"Ala_tRNA_synth_B"},{"dbname":"NCBIFAM","description":"alanine--tRNA ligase","id":"TIGR00344","interpro_description":"Alanine-tRNA ligase, class IIc","interpro_id":"IPR002318","interpro_name":"Ala-tRNA-lgiase_IIc","locations":[{"end":937,"start":13}],"match_end":937,"match_start":13,"name":"alaS"}],"location":{"chromosome_name":"supercont5.3","end_pos":2379334,"start_pos":2376381,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":384,"start":371}}],"name":"ala1","ortholog_annotations":[{"gene_uniquename":"SJAG_01797","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01797","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21022","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01797","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01797","ortholog_taxonid":4932,"ortholog_uniquename":"YOR335C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01797","ortholog_taxonid":4932,"ortholog_uniquename":"YOR335C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0000049","GO:0008270"],"not-binding":["GO:0002161","GO:0004813"]}},"subset_termids":["MONDO:0004736","MONDO:0700092","GO:0006399","GO:0016874","MONDO:0005559","MONDO:0005027","GO:0005739","MONDO:0005244","MONDO:0004069","GO:0002181","MONDO:0005093","GO:0005829","GO:0140098","GO:0140053","MONDO:0005066","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0002161":null,"GO:0002181":null,"GO:0004813":null,"GO:0005524":null,"GO:0005759":null,"GO:0005829":null,"GO:0008270":null,"GO:0032543":null,"GO:0106074":null,"MONDO:0013212":null,"MONDO:0013570":null,"MONDO:0014387":null,"MONDO:0014593":null,"MONDO:0030517":null,"MONDO:0030634":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01797.1"],"transcripts_by_uniquename":{"SJAG_01797.1":null},"uniprot_identifier":"B6JYX5","uniquename":"SJAG_01797"}


id: SJAG_01798
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":123,"start":123}},{"assigned_by":"UniProtKB","range":{"end":213,"start":213}}],"cv_annotations":{"biological_process":[{"annotations":[79695],"is_not":false,"summary":null,"term":"GO:0034477"}],"cellular_component":[{"annotations":[79694],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[68814],"is_not":false,"summary":null,"term":"GO:1990838"}],"mondo":[{"annotations":[87144],"is_not":false,"summary":null,"term":"MONDO:0011405"}]},"dbxrefs":["InterPro:IPR027521","InterPro:IPR009097","UniProtKB/TrEMBL:B6JYX6","EnsemblGenomes-Gn:SJAG_01798","EnsemblGenomes-Tr:EEB06744","GOA:B6JYX6"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":35,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"}],"genes_by_uniquename":{"HGNC:25792":null,"SJAG_01798":null,"SPAC23C11.10":null,"YLR132C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Uncharacterised conserved protein","id":"PF09749","interpro_description":"U6 snRNA phosphodiesterase 1","interpro_id":"IPR027521","interpro_name":"Usb1","locations":[{"end":275,"start":31}],"match_end":275,"match_start":31,"name":"HVSL"},{"dbname":"SUPERFAMILY","id":"SSF55144","interpro_description":"Cyclic phosphodiesterase","interpro_id":"IPR009097","interpro_name":"Cyclic_Pdiesterase","locations":[{"end":226,"start":120}],"match_end":226,"match_start":120,"name":"LigT-like"},{"dbname":"GENE3D","id":"G3DSA:3.90.1140.10","locations":[{"end":279,"start":59}],"match_end":279,"match_start":59,"name":"Cyclic phosphodiesterase"},{"dbname":"PANTHER","id":"PTHR13522","interpro_description":"U6 snRNA phosphodiesterase 1","interpro_id":"IPR027521","interpro_name":"Usb1","locations":[{"end":238,"start":1}],"match_end":238,"match_start":1,"name":"U6 SNRNA PHOSPHODIESTERASE 1"},{"dbname":"HAMAP","description":"U6 snRNA phosphodiesterase [USB1].","id":"MF_03040","interpro_description":"U6 snRNA phosphodiesterase 1","interpro_id":"IPR027521","interpro_name":"Usb1","locations":[{"end":279,"start":3}],"match_end":279,"match_start":3,"name":"USB1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":35,"start":1}],"match_end":35,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":18,"start":8}],"match_end":18,"match_start":8,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2380678,"start_pos":2379590,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":17,"start":7}},{"range":{"end":88,"start":79}}],"name":"mpn1","ortholog_annotations":[{"gene_uniquename":"SJAG_01798","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25792","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01798","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01798","ortholog_taxonid":4932,"ortholog_uniquename":"YLR132C","reference_uniquename":"PMID:29761456"}],"product":"poly(U)-specific exoribonuclease, producing 3' uridine cyclic phosphate ends Mpn1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:1990838"]}},"subset_termids":["MONDO:0005046","GO:0140098","MONDO:0005093","GO:0016073","MONDO:0005570","GO:0004527","GO:0016788","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0034477":null,"GO:1990838":null,"MONDO:0011405":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01798.1"],"transcripts_by_uniquename":{"SJAG_01798.1":null},"uniprot_identifier":"B6JYX6","uniquename":"SJAG_01798"}


id: SJAG_01799
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":72,"start":72}}],"cv_annotations":{"biological_process":[{"annotations":[74431],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[94101],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[94102],"is_not":false,"summary":null,"term":"GO:2000247"},{"annotations":[94104],"is_not":false,"summary":null,"term":"GO:0048024"},{"annotations":[94105],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[94090],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[94091],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[74430],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94093],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[94094],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[74432],"is_not":false,"summary":null,"term":"GO:0005956"},{"annotations":[94098],"is_not":false,"summary":null,"term":"GO:0034456"}],"molecular_function":[{"annotations":[62087],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[74428],"is_not":false,"summary":null,"term":"GO:0004674"}],"mondo":[{"annotations":[86490],"is_not":false,"summary":null,"term":"MONDO:0014893"}]},"dbxrefs":["InterPro:IPR008271","EnsemblGenomes-Gn:SJAG_01799","InterPro:IPR011009","EnsemblGenomes-Tr:EEB06745","InterPro:IPR017441","UniProtKB/TrEMBL:B6JYX7","InterPro:IPR000719","GOA:B6JYX7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"}],"genes_by_uniquename":{"HGNC:2457":null,"HGNC:2459":null,"SJAG_01799":null,"SPAC23C11.11":null,"YIL035C":null,"YOR061W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":328,"start":43}],"match_end":328,"match_start":43,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_CK2_alpha","id":"cd14132","interpro_description":"Casein Kinase 2, subunit alpha","interpro_id":"IPR045216","interpro_name":"CK2_alpha","locations":[{"end":329,"start":24}],"match_end":329,"match_start":24,"name":"STKc_CK2_alpha"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":72,"start":49}],"match_end":72,"match_start":49,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":168,"start":156}],"match_end":168,"match_start":156,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":328,"start":43}],"match_end":328,"match_start":43,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":328,"start":43}],"match_end":328,"match_start":43,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Casein kinase II subunit alpha","id":"G3DSA:1.10.510.10:FF:000059","locations":[{"end":331,"start":120}],"match_end":331,"match_start":120},{"dbname":"FUNFAM","description":"Casein kinase II subunit alpha","id":"G3DSA:3.30.200.20:FF:000088","locations":[{"end":119,"start":29}],"match_end":119,"match_start":29},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":330,"start":14}],"match_end":330,"match_start":14,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":114,"start":29}],"match_end":114,"match_start":29,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":334,"start":115}],"match_end":334,"match_start":115,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PANTHER","id":"PTHR24054","interpro_description":"Casein Kinase 2, subunit alpha","interpro_id":"IPR045216","interpro_name":"CK2_alpha","locations":[{"end":332,"start":11}],"match_end":332,"match_start":11,"name":"CASEIN KINASE II SUBUNIT ALPHA"}],"location":{"chromosome_name":"supercont5.3","end_pos":2382459,"start_pos":2381236,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":82,"start":69}}],"name":"cka1","ortholog_annotations":[{"gene_uniquename":"SJAG_01799","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2457","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01799","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2459","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01799","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01799","ortholog_taxonid":4932,"ortholog_uniquename":"YIL035C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01799","ortholog_taxonid":4932,"ortholog_uniquename":"YIL035C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01799","ortholog_taxonid":4932,"ortholog_uniquename":"YOR061W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01799","ortholog_taxonid":4932,"ortholog_uniquename":"YOR061W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein kinase Cka1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004674"]}},"subset_termids":["GO:0016301","GO:0000935","GO:0006355","GO:0004672","GO:0006351","GO:0140096","GO:0023052","GO:0015630","GO:0005816","GO:0005694","GO:0030684","GO:0005829","GO:0005634","GO:0005730","GO:0007163","MONDO:0700092","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0000785":null,"GO:0000935":null,"GO:0004674":null,"GO:0005524":null,"GO:0005829":null,"GO:0005956":null,"GO:0006974":null,"GO:0023052":null,"GO:0034456":null,"GO:0044732":null,"GO:0048024":null,"GO:0051286":null,"GO:2000247":null,"MONDO:0014893":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01799.1"],"transcripts_by_uniquename":{"SJAG_01799.1":null},"uniprot_identifier":"B6JYX7","uniquename":"SJAG_01799"}


id: SJAG_01800
data:
  {"coiled_coil_coords":[{"range":{"end":34,"start":14}}],"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01800","UniProtKB/TrEMBL:B6JYX8","EnsemblGenomes-Tr:EEB06746"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"}],"genes_by_uniquename":{"SJAG_01800":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":34,"start":14}],"match_end":34,"match_start":14,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2383319,"start_pos":2383016,"strand":"reverse"},"product":"dubious, SPNCRNA.800  syntenic position","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01800.1"],"transcripts_by_uniquename":{"SJAG_01800.1":null},"uniprot_identifier":"B6JYX8","uniquename":"SJAG_01800"}


id: SJAG_01801
data:
  {"cv_annotations":{"biological_process":[{"annotations":[66502],"is_not":false,"summary":null,"term":"GO:0031145"},{"annotations":[94112],"is_not":false,"summary":null,"term":"GO:0031536"}],"cellular_component":[{"annotations":[66501],"is_not":false,"summary":null,"term":"GO:0005680"},{"annotations":[94109],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06747","EnsemblGenomes-Gn:SJAG_01801","GOA:B6JYX9","UniProtKB/TrEMBL:B6JYX9","InterPro:IPR018860"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":74,"start":26}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"}],"genes_by_uniquename":{"HGNC:17839":null,"SJAG_01801":null,"SPAC23C11.12":null,"YFR036W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Anaphase-promoting complex APC subunit CDC26","id":"PF10471","interpro_description":"Anaphase-promoting complex, subunit CDC26","interpro_id":"IPR018860","interpro_name":"APC_suCDC26","locations":[{"end":52,"start":1}],"match_end":52,"match_start":1,"name":"ANAPC_CDC26"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":74,"start":26}],"match_end":74,"match_start":26,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":53,"start":40}],"match_end":53,"match_start":40,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":39,"start":26}],"match_end":39,"match_start":26,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2383972,"start_pos":2383748,"strand":"forward"},"name":"hcn1","ortholog_annotations":[{"gene_uniquename":"SJAG_01801","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17839","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01801","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01801","ortholog_taxonid":4932,"ortholog_uniquename":"YFR036W","reference_uniquename":"PMID:29761456"}],"product":"anaphase-promoting complex TPR lobe accessory factor subunit Hcn1/Apc12","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0044772","GO:0005634","GO:0030163","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005680":null,"GO:0005829":null,"GO:0031145":null,"GO:0031536":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01801.1"],"transcripts_by_uniquename":{"SJAG_01801.1":null},"uniprot_identifier":"B6JYX9","uniquename":"SJAG_01801"}


id: SJAG_01803
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94128],"is_not":false,"summary":null,"term":"GO:0010312"},{"annotations":[77481],"is_not":false,"summary":null,"term":"GO:0006882"},{"annotations":[94132],"is_not":false,"summary":null,"term":"GO:0140209"}],"cellular_component":[{"annotations":[94124],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[94126],"is_not":false,"summary":null,"term":"GO:0000329"}],"molecular_function":[{"annotations":[94134],"is_not":false,"summary":null,"term":"GO:0140486"},{"annotations":[77479],"is_not":false,"summary":null,"term":"GO:0005385"}]},"dbxrefs":["InterPro:IPR036837","UniProtKB/TrEMBL:B6JYY0","InterPro:IPR002524","GOA:B6JYY0","EnsemblGenomes-Tr:EEB06748","EnsemblGenomes-Gn:SJAG_01803","InterPro:IPR027469"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":227,"start":177}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"}],"genes_by_uniquename":{"HGNC:11012":null,"SJAG_01803":null,"SPAC23C11.14":null,"YMR243C":null,"YOR316C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cation efflux family","id":"PF01545","interpro_description":"Cation efflux protein","interpro_id":"IPR002524","interpro_name":"Cation_efflux","locations":[{"end":297,"start":13}],"match_end":297,"match_start":13,"name":"Cation_efflux"},{"dbname":"SUPERFAMILY","id":"SSF160240","interpro_description":"Cation efflux protein, cytoplasmic domain superfamily","interpro_id":"IPR036837","interpro_name":"Cation_efflux_CTD_sf","locations":[{"end":378,"start":301}],"match_end":378,"match_start":301,"name":"Cation efflux protein cytoplasmic domain-like"},{"dbname":"SUPERFAMILY","id":"SSF161111","interpro_description":"Cation efflux transmembrane domain superfamily","interpro_id":"IPR027469","interpro_name":"Cation_efflux_TMD_sf","locations":[{"end":136,"start":9},{"end":298,"start":227}],"match_end":298,"match_start":9,"name":"Cation efflux protein transmembrane domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.1510.10","interpro_description":"Cation efflux transmembrane domain superfamily","interpro_id":"IPR027469","interpro_name":"Cation_efflux_TMD_sf","locations":[{"end":177,"start":6},{"end":296,"start":190}],"match_end":296,"match_start":6,"name":"Cation efflux protein transmembrane domain"},{"dbname":"PANTHER","id":"PTHR45820","locations":[{"end":413,"start":4}],"match_end":413,"match_start":4,"name":"FI23527P1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":227,"start":177}],"match_end":227,"match_start":177,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":222,"start":209}],"match_end":222,"match_start":209,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":197,"start":178}],"match_end":197,"match_start":178,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"cation diffusion facilitator family transporter","id":"TIGR01297","interpro_description":"Cation efflux protein","interpro_id":"IPR002524","interpro_name":"Cation_efflux","locations":[{"end":377,"start":9}],"match_end":377,"match_start":9,"name":"CDF"}],"location":{"chromosome_name":"supercont5.3","end_pos":2388741,"start_pos":2387497,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":143,"start":132}},{"range":{"end":223,"start":208}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01803","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11012","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01803","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01803","ortholog_taxonid":4932,"ortholog_uniquename":"YMR243C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01803","ortholog_taxonid":4932,"ortholog_uniquename":"YMR243C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01803","ortholog_taxonid":4932,"ortholog_uniquename":"YOR316C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01803","ortholog_taxonid":4932,"ortholog_uniquename":"YOR316C","reference_uniquename":"PMID:26896847"}],"product":"cation efflux protein family","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140486","GO:0005385"]}},"subset_termids":["GO:0098771","GO:0098754","GO:0005783","GO:0005789","GO:0055085","GO:0022857","GO:0005773","GO:0140313"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005385":null,"GO:0005789":null,"GO:0006882":null,"GO:0010312":null,"GO:0140209":null,"GO:0140486":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":29,"start":7}},{"assigned_by":"TMHMM","range":{"end":56,"start":34}},{"assigned_by":"TMHMM","range":{"end":96,"start":77}},{"assigned_by":"TMHMM","range":{"end":133,"start":111}},{"assigned_by":"TMHMM","range":{"end":258,"start":236}},{"assigned_by":"TMHMM","range":{"end":295,"start":273}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01803.1"],"transcripts_by_uniquename":{"SJAG_01803.1":null},"uniprot_identifier":"B6JYY0","uniquename":"SJAG_01803"}


id: SJAG_01804
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70528],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[94141],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[94139],"is_not":false,"summary":null,"term":"GO:0032221"}],"molecular_function":[{"annotations":[70527],"is_not":false,"summary":null,"term":"GO:0003714"}],"mondo":[{"annotations":[86519],"is_not":false,"summary":null,"term":"MONDO:0013256"}]},"dbxrefs":["GOA:B6JYY1","InterPro:IPR036600","EnsemblGenomes-Tr:EEB06749","InterPro:IPR013194","InterPro:IPR003822","UniProtKB/TrEMBL:B6JYY1","InterPro:IPR039774","InterPro:IPR031693","EnsemblGenomes-Gn:SJAG_01804"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":748,"start":689}},{"range":{"end":812,"start":777}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"}],"genes_by_uniquename":{"HGNC:19353":null,"HGNC:19354":null,"SJAG_01804":null,"SPAC23C11.15":null,"YOL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sin3 family co-repressor","id":"PF08295","interpro_description":"Histone deacetylase interacting domain","interpro_id":"IPR013194","interpro_name":"HDAC_interact_dom","locations":[{"end":497,"start":403}],"match_end":497,"match_start":403,"name":"Sin3_corepress"},{"dbname":"PFAM","description":"C-terminal domain of Sin3a protein","id":"PF16879","interpro_description":"Sin3, C-terminal","interpro_id":"IPR031693","interpro_name":"Sin3_C","locations":[{"end":1099,"start":823}],"match_end":1099,"match_start":823,"name":"Sin3a_C"},{"dbname":"PROSITE_PROFILES","description":"PAH domain profile.","id":"PS51477","interpro_description":"Paired amphipathic helix","interpro_id":"IPR003822","interpro_name":"PAH","locations":[{"end":168,"start":96}],"match_end":168,"match_start":96,"name":"PAH"},{"dbname":"SMART","id":"SM00761","interpro_description":"Histone deacetylase interacting domain","interpro_id":"IPR013194","interpro_name":"HDAC_interact_dom","locations":[{"end":500,"start":399}],"match_end":500,"match_start":399,"name":"hdac_interact2seq4b"},{"dbname":"SUPERFAMILY","id":"SSF47762","interpro_description":"Paired amphipathic helix superfamily","interpro_id":"IPR036600","interpro_name":"PAH_sf","locations":[{"end":167,"start":98},{"end":273,"start":207},{"end":381,"start":320}],"match_end":381,"match_start":98,"name":"PAH2 domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.1160.11","interpro_description":"Paired amphipathic helix superfamily","interpro_id":"IPR036600","interpro_name":"PAH_sf","locations":[{"end":166,"start":106},{"end":385,"start":318}],"match_end":385,"match_start":106,"name":"Paired amphipathic helix"},{"dbname":"PANTHER","id":"PTHR12346","interpro_description":"Transcriptional regulatory protein Sin3-like","interpro_id":"IPR039774","interpro_name":"Sin3-like","locations":[{"end":939,"start":101}],"match_end":939,"match_start":101,"name":"SIN3B-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":748,"start":689},{"end":812,"start":777}],"match_end":812,"match_start":689,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":803,"start":777}],"match_end":803,"match_start":777,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":748,"start":737}],"match_end":748,"match_start":737,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2393445,"start_pos":2389923,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":838,"start":827}}],"name":"pst2","ortholog_annotations":[{"gene_uniquename":"SJAG_01804","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19353","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01804","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19354","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01804","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01804","ortholog_taxonid":4932,"ortholog_uniquename":"YOL004W","reference_uniquename":"PMID:29761456"}],"product":"Clr6 histone deacetylase complex subunit Pst2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003714"]}},"subset_termids":["GO:0003712","GO:0060090","GO:0005694","GO:0006325","GO:0006355","GO:0005634","GO:0006351","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0003714":null,"GO:0032221":null,"GO:0045815":null,"MONDO:0013256":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01804.1"],"transcripts_by_uniquename":{"SJAG_01804.1":null},"uniprot_identifier":"B6JYY1","uniquename":"SJAG_01804"}


id: SJAG_01805
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":73,"start":73}}],"cv_annotations":{"biological_process":[{"annotations":[94155],"is_not":false,"summary":null,"term":"GO:0031619"},{"annotations":[94158],"is_not":false,"summary":null,"term":"GO:1990571"},{"annotations":[94159],"is_not":false,"summary":null,"term":"GO:1990813"},{"annotations":[94160],"is_not":false,"summary":null,"term":"GO:1990395"},{"annotations":[76444],"is_not":false,"summary":null,"term":"GO:0007052"},{"annotations":[94162],"is_not":false,"summary":null,"term":"GO:0045793"},{"annotations":[94163],"is_not":false,"summary":null,"term":"GO:0010971"},{"annotations":[94165],"is_not":false,"summary":null,"term":"GO:0140281"},{"annotations":[94166],"is_not":false,"summary":null,"term":"GO:0045842"},{"annotations":[94167],"is_not":false,"summary":null,"term":"GO:0140429"},{"annotations":[94168],"is_not":false,"summary":null,"term":"GO:0046827"},{"annotations":[94169],"is_not":false,"summary":null,"term":"GO:0031031"},{"annotations":[94170],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[94171],"is_not":false,"summary":null,"term":"GO:1903499"},{"annotations":[94172],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[94145],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76441],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[94148],"is_not":false,"summary":null,"term":"GO:0090619"},{"annotations":[94149],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[94151],"is_not":false,"summary":null,"term":"GO:1990023"},{"annotations":[94152],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[94153],"is_not":false,"summary":null,"term":"GO:0140602"}],"molecular_function":[{"annotations":[64712],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[76440],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["InterPro:IPR033701","InterPro:IPR036947","UniProtKB/TrEMBL:B6JYY2","InterPro:IPR000959","InterPro:IPR011009","EnsemblGenomes-Gn:SJAG_01805","InterPro:IPR008271","GOA:B6JYY2","EnsemblGenomes-Tr:EEB06750","InterPro:IPR000719","InterPro:IPR017441","InterPro:IPR033695"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":20,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"}],"genes_by_uniquename":{"HGNC:19699":null,"HGNC:2154":null,"HGNC:9077":null,"SJAG_01805":null,"SPAC23C11.16":null,"YMR001C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":296,"start":41}],"match_end":296,"match_start":41,"name":"Pkinase"},{"dbname":"PFAM","description":"POLO box duplicated region","id":"PF00659","interpro_description":"POLO box domain","interpro_id":"IPR000959","interpro_name":"POLO_box_dom","locations":[{"end":572,"start":511},{"end":674,"start":614}],"match_end":674,"match_start":511,"name":"POLO_box"},{"dbname":"CDD","description":"POLO_box_2","id":"cd13117","interpro_description":"Second polo-box domain","interpro_id":"IPR033695","interpro_name":"POLO_box_2","locations":[{"end":682,"start":607}],"match_end":682,"match_start":607,"name":"POLO_box_2"},{"dbname":"CDD","description":"STKc_PLK","id":"cd14099","locations":[{"end":296,"start":40}],"match_end":296,"match_start":40,"name":"STKc_PLK"},{"dbname":"CDD","description":"POLO_box_1","id":"cd13118","interpro_description":"First polo-box domain","interpro_id":"IPR033701","interpro_name":"POLO_box_1","locations":[{"end":590,"start":499}],"match_end":590,"match_start":499,"name":"POLO_box_1"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":73,"start":47}],"match_end":73,"match_start":47,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":171,"start":159}],"match_end":171,"match_start":159,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"POLO box domain profile.","id":"PS50078","interpro_description":"POLO box domain","interpro_id":"IPR000959","interpro_name":"POLO_box_dom","locations":[{"end":584,"start":502},{"end":686,"start":604}],"match_end":686,"match_start":502,"name":"POLO_BOX"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":296,"start":41}],"match_end":296,"match_start":41,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":296,"start":41}],"match_end":296,"match_start":41,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Aurora kinase A","id":"G3DSA:3.30.200.20:FF:000042","locations":[{"end":123,"start":34}],"match_end":123,"match_start":34},{"dbname":"FUNFAM","description":"Serine/threonine-protein kinase","id":"G3DSA:1.10.510.10:FF:001669","locations":[{"end":334,"start":33}],"match_end":334,"match_start":33},{"dbname":"SUPERFAMILY","id":"SSF82615","locations":[{"end":590,"start":476},{"end":683,"start":603}],"match_end":683,"match_start":476,"name":"Polo-box domain"},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":326,"start":41}],"match_end":326,"match_start":41,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":330,"start":124}],"match_end":330,"match_start":124,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.1120.30","interpro_description":"POLO box domain superfamily","interpro_id":"IPR036947","interpro_name":"POLO_box_dom_sf","locations":[{"end":679,"start":498}],"match_end":679,"match_start":498,"name":"POLO box domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":123,"start":36}],"match_end":123,"match_start":36,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"PANTHER","id":"PTHR24345","locations":[{"end":682,"start":12}],"match_end":682,"match_start":12,"name":"SERINE/THREONINE-PROTEIN KINASE PLK"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":20,"start":1}],"match_end":20,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2396057,"start_pos":2393789,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":19,"start":6}}],"name":"plo1","ortholog_annotations":[{"gene_uniquename":"SJAG_01805","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19699","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01805","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2154","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01805","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9077","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01805","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01805","ortholog_taxonid":4932,"ortholog_uniquename":"YMR001C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01805","ortholog_taxonid":4932,"ortholog_uniquename":"YMR001C","reference_uniquename":"PMID:26896847"}],"product":"Polo kinase Plo1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004674"]}},"subset_termids":["GO:0016301","GO:0015630","GO:0000070","GO:0140096","GO:0000776","GO:0140013","GO:0005694","GO:0005634","GO:0072686","GO:0044772","GO:0006351","GO:0006913","GO:0006355","GO:0000281","GO:0005829","GO:0030036","GO:0005816","GO:0004672","GO:0023052","GO:0000226"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000776":null,"GO:0004674":null,"GO:0005524":null,"GO:0005829":null,"GO:0007052":null,"GO:0010971":null,"GO:0031031":null,"GO:0031619":null,"GO:0035974":null,"GO:0044732":null,"GO:0045793":null,"GO:0045842":null,"GO:0045944":null,"GO:0046827":null,"GO:0051455":null,"GO:0090619":null,"GO:0140281":null,"GO:0140429":null,"GO:0140602":null,"GO:1903499":null,"GO:1990023":null,"GO:1990395":null,"GO:1990571":null,"GO:1990813":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01805.1"],"transcripts_by_uniquename":{"SJAG_01805.1":null},"uniprot_identifier":"B6JYY2","uniquename":"SJAG_01805"}


id: SJAG_01806
data:
  {"coiled_coil_coords":[{"range":{"end":438,"start":415}}],"cv_annotations":{"biological_process":[{"annotations":[94177],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[94175],"is_not":false,"summary":null,"term":"GO:0099617"}],"molecular_function":[{"annotations":[63000],"is_not":false,"summary":null,"term":"GO:0043022"}],"mondo":[{"annotations":[86147],"is_not":false,"summary":null,"term":"MONDO:0859304"},{"annotations":[85968],"is_not":false,"summary":null,"term":"MONDO:0008684"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01806","InterPro:IPR011685","GOA:B6JYY3","InterPro:IPR033122","EnsemblGenomes-Tr:EEB06751","UniProtKB/TrEMBL:B6JYY3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":99,"start":69}},{"range":{"end":461,"start":425}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hcn1","uniquename":"SJAG_01801"},{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"}],"genes_by_uniquename":{"HGNC:14648":null,"HGNC:6556":null,"SJAG_01806":null,"SPAC23C11.17":null,"YOL027C":null,"YPR125W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LETM1-like, RBD","id":"PF07766","interpro_description":"LETM1-like, ribosome-binding domain","interpro_id":"IPR033122","interpro_name":"LETM1-like_RBD","locations":[{"end":372,"start":143}],"match_end":372,"match_start":143,"name":"LETM1_RBD"},{"dbname":"PROSITE_PROFILES","description":"Letm1 ribosome-binding (RBD) domain profile.","id":"PS51758","interpro_description":"LETM1-like, ribosome-binding domain","interpro_id":"IPR033122","interpro_name":"LETM1-like_RBD","locations":[{"end":397,"start":204}],"match_end":397,"match_start":204,"name":"LETM1_RBD"},{"dbname":"PANTHER","id":"PTHR14009","interpro_description":"LETM1/MDM38-like","interpro_id":"IPR044202","interpro_name":"LETM1/MDM38-like","locations":[{"end":445,"start":69}],"match_end":445,"match_start":69,"name":"LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":438,"start":415}],"match_end":438,"match_start":415,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":99,"start":69},{"end":461,"start":425}],"match_end":461,"match_start":69,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":94,"start":83},{"end":461,"start":441}],"match_end":461,"match_start":83,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2398567,"start_pos":2397137,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":434,"start":417}},{"range":{"end":451,"start":439}}],"name":"mdm38","ortholog_annotations":[{"gene_uniquename":"SJAG_01806","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14648","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01806","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6556","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01806","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.17","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01806","ortholog_taxonid":4932,"ortholog_uniquename":"YOL027C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01806","ortholog_taxonid":4932,"ortholog_uniquename":"YOL027C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01806","ortholog_taxonid":4932,"ortholog_uniquename":"YPR125W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial membrane-associated ribosome receptor Mdm38","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043022"]}},"subset_termids":["MONDO:0005559","GO:0005739","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0032543":null,"GO:0043022":null,"GO:0099617":null,"MONDO:0008684":null,"MONDO:0859304":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":181,"start":159}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01806.1"],"transcripts_by_uniquename":{"SJAG_01806.1":null},"uniprot_identifier":"B6JYY3","uniquename":"SJAG_01806"}


id: SJAG_01807
data:
  {"coiled_coil_coords":[{"range":{"end":504,"start":484}}],"cv_annotations":{"biological_process":[{"annotations":[65005],"is_not":false,"summary":null,"term":"GO:0006298"},{"annotations":[76722],"is_not":false,"summary":null,"term":"GO:0043504"}],"cellular_component":[{"annotations":[88943],"is_not":false,"summary":null,"term":"GO:0000262"},{"annotations":[76723],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[65002],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[88949],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[65004],"is_not":false,"summary":null,"term":"GO:0140664"},{"annotations":[65003],"is_not":false,"summary":null,"term":"GO:0030983"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06752","GOA:B6JYY4","InterPro:IPR016151","EnsemblGenomes-Gn:SJAG_01807","InterPro:IPR017261","InterPro:IPR007696","InterPro:IPR027417","InterPro:IPR036187","InterPro:IPR007695","InterPro:IPR000432","InterPro:IPR036678","UniProtKB/TrEMBL:B6JYY4","InterPro:IPR007860"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hpt1","uniquename":"SJAG_06634"},{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"}],"genes_by_uniquename":{"SJAG_01807":null,"SPAC13F5.01c":null,"YHR120W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MutS domain I","id":"PF01624","interpro_description":"DNA mismatch repair protein MutS-like, N-terminal","interpro_id":"IPR007695","interpro_name":"DNA_mismatch_repair_MutS-lik_N","locations":[{"end":173,"start":69}],"match_end":173,"match_start":69,"name":"MutS_I"},{"dbname":"PFAM","description":"MutS domain V","id":"PF00488","interpro_description":"DNA mismatch repair protein MutS, C-terminal","interpro_id":"IPR000432","interpro_name":"DNA_mismatch_repair_MutS_C","locations":[{"end":918,"start":733}],"match_end":918,"match_start":733,"name":"MutS_V"},{"dbname":"PFAM","description":"MutS domain II","id":"PF05188","interpro_description":"DNA mismatch repair protein MutS, connector domain","interpro_id":"IPR007860","interpro_name":"DNA_mmatch_repair_MutS_con_dom","locations":[{"end":312,"start":182}],"match_end":312,"match_start":182,"name":"MutS_II"},{"dbname":"PFAM","description":"MutS domain III","id":"PF05192","interpro_description":"DNA mismatch repair protein MutS, core","interpro_id":"IPR007696","interpro_name":"DNA_mismatch_repair_MutS_core","locations":[{"end":679,"start":335}],"match_end":679,"match_start":335,"name":"MutS_III"},{"dbname":"PROSITE_PATTERNS","description":"DNA mismatch repair proteins mutS family signature.","id":"PS00486","interpro_description":"DNA mismatch repair protein MutS, C-terminal","interpro_id":"IPR000432","interpro_name":"DNA_mismatch_repair_MutS_C","locations":[{"end":827,"start":811}],"match_end":827,"match_start":811,"name":"DNA_MISMATCH_REPAIR_2"},{"dbname":"SMART","id":"SM00534","interpro_description":"DNA mismatch repair protein MutS, C-terminal","interpro_id":"IPR000432","interpro_name":"DNA_mismatch_repair_MutS_C","locations":[{"end":918,"start":730}],"match_end":918,"match_start":730,"name":"mutATP5"},{"dbname":"SMART","id":"SM00533","interpro_description":"DNA mismatch repair protein MutS, core","interpro_id":"IPR007696","interpro_name":"DNA_mismatch_repair_MutS_core","locations":[{"end":711,"start":349}],"match_end":711,"match_start":349,"name":"DNAend"},{"dbname":"FUNFAM","description":"DNA mismatch repair protein","id":"G3DSA:3.40.50.300:FF:001238","locations":[{"end":921,"start":688}],"match_end":921,"match_start":688},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":918,"start":687}],"match_end":918,"match_start":687,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF53150","interpro_description":"MutS, connector domain superfamily","interpro_id":"IPR036678","interpro_name":"MutS_con_dom_sf","locations":[{"end":331,"start":168}],"match_end":331,"match_start":168,"name":"DNA repair protein MutS, domain II"},{"dbname":"SUPERFAMILY","id":"SSF48334","interpro_description":"DNA mismatch repair protein MutS, core domain superfamily","interpro_id":"IPR036187","interpro_name":"DNA_mismatch_repair_MutS_sf","locations":[{"end":481,"start":334},{"end":684,"start":530}],"match_end":684,"match_start":334,"name":"DNA repair protein MutS, domain III"},{"dbname":"SUPERFAMILY","id":"SSF55271","interpro_description":"DNA mismatch repair protein MutS, N-terminal","interpro_id":"IPR016151","interpro_name":"DNA_mismatch_repair_MutS_N","locations":[{"end":169,"start":54}],"match_end":169,"match_start":54,"name":"DNA repair protein MutS, domain I"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.110","interpro_description":"MutS, connector domain superfamily","interpro_id":"IPR036678","interpro_name":"MutS_con_dom_sf","locations":[{"end":324,"start":181}],"match_end":324,"match_start":181,"name":"MutS, connector domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":920,"start":687}],"match_end":920,"match_start":687},{"dbname":"GENE3D","id":"G3DSA:3.40.1170.10","interpro_description":"DNA mismatch repair protein MutS, N-terminal","interpro_id":"IPR016151","interpro_name":"DNA_mismatch_repair_MutS_N","locations":[{"end":175,"start":51}],"match_end":175,"match_start":51,"name":"DNA repair protein MutS, domain I"},{"dbname":"GENE3D","id":"G3DSA:1.10.1420.10","locations":[{"end":513,"start":329}],"match_end":513,"match_start":329},{"dbname":"PANTHER","id":"PTHR11361","interpro_description":"DNA mismatch repair MutS","interpro_id":"IPR045076","interpro_name":"MutS","locations":[{"end":918,"start":74}],"match_end":918,"match_start":74,"name":"DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF037677","interpro_description":"DNA mismatch repair protein MutS/MSH","interpro_id":"IPR017261","interpro_name":"DNA_mismatch_repair_MutS/MSH","locations":[{"end":919,"start":66}],"match_end":919,"match_start":66,"name":"Msh6"},{"dbname":"COILS","id":"Coil","locations":[{"end":504,"start":484}],"match_end":504,"match_start":484,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":2401696,"start_pos":2398931,"strand":"reverse"},"name":"msh1","ortholog_annotations":[{"gene_uniquename":"SJAG_01807","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC13F5.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01807","ortholog_taxonid":4932,"ortholog_uniquename":"YHR120W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01807","ortholog_taxonid":4932,"ortholog_uniquename":"YHR120W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial MutS protein Msh1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0030983"],"not-binding":["GO:0016887","GO:0140664"]}},"subset_termids":["GO:0140097","GO:0098772","GO:0005739","GO:0006281","GO:0007005","GO:0005694","GO:0005634","GO:0140299","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000262":null,"GO:0005524":null,"GO:0005634":null,"GO:0006298":null,"GO:0016887":null,"GO:0030983":null,"GO:0043504":null,"GO:0140664":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01807.1"],"transcripts_by_uniquename":{"SJAG_01807.1":null},"uniprot_identifier":"B6JYY4","uniquename":"SJAG_01807"}


id: SJAG_01808
data:
  {"coiled_coil_coords":[{"range":{"end":392,"start":372}}],"cv_annotations":{"biological_process":[{"annotations":[74862],"is_not":false,"summary":null,"term":"GO:0051123"}],"cellular_component":[{"annotations":[88952],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74861],"is_not":false,"summary":null,"term":"GO:0005669"}],"molecular_function":[{"annotations":[74860],"is_not":false,"summary":null,"term":"GO:0016251"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01808","InterPro:IPR037817","GOA:B6JYY5","EnsemblGenomes-Tr:EEB06753","UniProtKB/TrEMBL:B6JYY5","InterPro:IPR006751"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":29,"start":1}},{"range":{"end":275,"start":245}},{"range":{"end":341,"start":296}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01803"},{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"}],"genes_by_uniquename":{"HGNC:11541":null,"HGNC:11548":null,"SJAG_01808":null,"SPAC13F5.02c":null,"YMR227C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TAFII55 protein conserved region","id":"PF04658","interpro_description":"TAFII55 protein, conserved region","interpro_id":"IPR006751","interpro_name":"TAFII55_prot_cons_reg","locations":[{"end":224,"start":74}],"match_end":224,"match_start":74,"name":"TAFII55_N"},{"dbname":"CDD","description":"TAF7","id":"cd08047","interpro_description":"TAFII55 protein, conserved region","interpro_id":"IPR006751","interpro_name":"TAFII55_prot_cons_reg","locations":[{"end":231,"start":75}],"match_end":231,"match_start":75,"name":"TAF7"},{"dbname":"SMART","id":"SM01370","interpro_description":"TAFII55 protein, conserved region","interpro_id":"IPR006751","interpro_name":"TAFII55_prot_cons_reg","locations":[{"end":225,"start":74}],"match_end":225,"match_start":74,"name":"TAFII55_N_2"},{"dbname":"PANTHER","id":"PTHR12228","interpro_description":"Transcription initiation factor TFIID subunit 7","interpro_id":"IPR037817","interpro_name":"TAF7","locations":[{"end":390,"start":68}],"match_end":390,"match_start":68,"name":"TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":392,"start":372}],"match_end":392,"match_start":372,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":29,"start":1},{"end":275,"start":245},{"end":341,"start":296}],"match_end":341,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":331,"start":311}],"match_end":331,"match_start":311,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":266,"start":256},{"end":341,"start":332}],"match_end":341,"match_start":256,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2403663,"start_pos":2402317,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":329,"start":306}}],"name":"taf7","ortholog_annotations":[{"gene_uniquename":"SJAG_01808","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11541","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01808","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11548","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01808","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC13F5.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01808","ortholog_taxonid":4932,"ortholog_uniquename":"YMR227C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01808","ortholog_taxonid":4932,"ortholog_uniquename":"YMR227C","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIID complex subunit Taf7","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016251"]}},"subset_termids":["GO:0005829","GO:0065003","GO:0005634","GO:0005654","GO:0006351","GO:0140223"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005669":null,"GO:0005829":null,"GO:0016251":null,"GO:0051123":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01808.1"],"transcripts_by_uniquename":{"SJAG_01808.1":null},"uniprot_identifier":"B6JYY5","uniquename":"SJAG_01808"}


id: SJAG_01809
data:
  {"cv_annotations":{"biological_process":[{"annotations":[119280],"is_not":false,"summary":null,"term":"GO:0099638"},{"annotations":[78126],"is_not":false,"summary":null,"term":"GO:0006896"},{"annotations":[119282],"is_not":false,"summary":null,"term":"GO:0042147"}],"cellular_component":[{"annotations":[78127],"is_not":false,"summary":null,"term":"GO:0030121"},{"annotations":[66791],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[119278],"is_not":false,"summary":null,"term":"GO:0005768"}],"molecular_function":[{"annotations":[78125],"is_not":false,"summary":null,"term":"GO:0035615"}],"mondo":[{"annotations":[86719],"is_not":false,"summary":null,"term":"MONDO:0859174"},{"annotations":[86596],"is_not":false,"summary":null,"term":"MONDO:0859196"}]},"dbxrefs":["GOA:B6JYY6","InterPro:IPR002553","EnsemblGenomes-Tr:EEB06754","InterPro:IPR008152","UniProtKB/TrEMBL:B6JYY6","InterPro:IPR011989","InterPro:IPR016024","InterPro:IPR013041","InterPro:IPR017107","InterPro:IPR008153","EnsemblGenomes-Gn:SJAG_01809"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pst2","uniquename":"SJAG_01804"},{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"}],"genes_by_uniquename":{"HGNC:555":null,"HGNC:556":null,"SJAG_01809":null,"SPCP1E11.06":null,"YPR029C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Adaptin N terminal region","id":"PF01602","interpro_description":"Clathrin/coatomer adaptor, adaptin-like, N-terminal","interpro_id":"IPR002553","interpro_name":"Clathrin/coatomer_adapt-like_N","locations":[{"end":576,"start":22}],"match_end":576,"match_start":22,"name":"Adaptin_N"},{"dbname":"PFAM","description":"Adaptin C-terminal domain","id":"PF02883","interpro_description":"Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain","interpro_id":"IPR008152","interpro_name":"Clathrin_a/b/g-adaptin_app_Ig","locations":[{"end":831,"start":724}],"match_end":831,"match_start":724,"name":"Alpha_adaptinC2"},{"dbname":"PROSITE_PROFILES","description":"Gamma-adaptin ear (GAE) domain profile.","id":"PS50180","interpro_description":"Gamma-adaptin ear (GAE) domain","interpro_id":"IPR008153","interpro_name":"GAE_dom","locations":[{"end":831,"start":717}],"match_end":831,"match_start":717,"name":"GAE"},{"dbname":"SMART","id":"SM00809","interpro_description":"Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain","interpro_id":"IPR008152","interpro_name":"Clathrin_a/b/g-adaptin_app_Ig","locations":[{"end":831,"start":714}],"match_end":831,"match_start":714,"name":"alpha_adaptinc2"},{"dbname":"SUPERFAMILY","id":"SSF49348","interpro_description":"Clathrin adaptor, appendage, Ig-like subdomain superfamily","interpro_id":"IPR013041","interpro_name":"Clathrin_app_Ig-like_sf","locations":[{"end":684,"start":666},{"end":834,"start":722}],"match_end":834,"match_start":666,"name":"Clathrin adaptor appendage domain"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":575,"start":22}],"match_end":575,"match_start":22,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1230","locations":[{"end":834,"start":704}],"match_end":834,"match_start":704},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":591,"start":1}],"match_end":591,"match_start":1},{"dbname":"PANTHER","id":"PTHR22780","interpro_description":"Adaptor Complexes Large Subunit","interpro_id":"IPR050840","interpro_name":"Adaptor_Complx_Large_Subunit","locations":[{"end":812,"start":6}],"match_end":812,"match_start":6,"name":"ADAPTIN, ALPHA/GAMMA/EPSILON"},{"dbname":"PIRSF","id":"PIRSF037094","interpro_description":"Adaptor protein complex AP-1, gamma subunit","interpro_id":"IPR017107","interpro_name":"AP1_complex_gsu","locations":[{"end":834,"start":1}],"match_end":834,"match_start":1,"name":"AP1_gamma"}],"location":{"chromosome_name":"supercont5.3","end_pos":2406709,"start_pos":2404199,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":720,"start":697}}],"name":"apl4","ortholog_annotations":[{"gene_uniquename":"SJAG_01809","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:555","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01809","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:556","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01809","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP1E11.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01809","ortholog_taxonid":4932,"ortholog_uniquename":"YPR029C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01809","ortholog_taxonid":4932,"ortholog_uniquename":"YPR029C","reference_uniquename":"PMID:26896847"}],"product":"AP-1 adaptor complex gamma subunit Apl4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0035615"]}},"subset_termids":["GO:0005768","GO:0016192","GO:0060090","GO:0005794","GO:0031410","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005768":null,"GO:0005829":null,"GO:0006896":null,"GO:0030121":null,"GO:0035615":null,"GO:0042147":null,"GO:0099638":null,"MONDO:0859174":null,"MONDO:0859196":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01809.1"],"transcripts_by_uniquename":{"SJAG_01809.1":null},"uniprot_identifier":"B6JYY6","uniquename":"SJAG_01809"}


id: SJAG_01810
data:
  {"coiled_coil_coords":[{"range":{"end":27,"start":7}},{"range":{"end":92,"start":72}}],"cv_annotations":{"biological_process":[{"annotations":[119290],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[119284],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[119286],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[119287],"is_not":false,"summary":null,"term":"GO:0000974"},{"annotations":[119289],"is_not":false,"summary":null,"term":"GO:0005684"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06755","InterPro:IPR013169","UniProtKB/TrEMBL:B6JYY7","EnsemblGenomes-Gn:SJAG_01810","GOA:B6JYY7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":44,"start":21}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"plo1","uniquename":"SJAG_01805"},{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"}],"genes_by_uniquename":{"HGNC:28332":null,"SJAG_01810":null,"SPCP1E11.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"cwf18 pre-mRNA splicing factor","id":"PF08315","interpro_description":"mRNA splicing factor Cwf18-like","interpro_id":"IPR013169","interpro_name":"mRNA_splic_Cwf18-like","locations":[{"end":138,"start":4}],"match_end":138,"match_start":4,"name":"cwf18"},{"dbname":"PANTHER","id":"PTHR31551","interpro_description":"mRNA splicing factor Cwf18-like","interpro_id":"IPR013169","interpro_name":"mRNA_splic_Cwf18-like","locations":[{"end":147,"start":4}],"match_end":147,"match_start":4,"name":"PRE-MRNA-SPLICING FACTOR CWF18"},{"dbname":"COILS","id":"Coil","locations":[{"end":27,"start":7},{"end":92,"start":72}],"match_end":92,"match_start":7,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":44,"start":21}],"match_end":44,"match_start":21,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2407360,"start_pos":2406902,"strand":"reverse"},"name":"cwf18","ortholog_annotations":[{"gene_uniquename":"SJAG_01810","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28332","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01810","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP1E11.07c","reference_uniquename":"PMID:21511999"}],"product":"complexed with Cdc5 protein Cwf18","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000974":null,"GO:0005684":null,"GO:0005829":null,"GO:0045292":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01810.1"],"transcripts_by_uniquename":{"SJAG_01810.1":null},"uniprot_identifier":"B6JYY7","uniquename":"SJAG_01810"}


id: SJAG_01811
data:
  {"cv_annotations":{"biological_process":[{"annotations":[119294],"is_not":false,"summary":null,"term":"GO:1902626"},{"annotations":[79750],"is_not":false,"summary":null,"term":"GO:0000460"},{"annotations":[79751],"is_not":false,"summary":null,"term":"GO:0000470"}],"cellular_component":[{"annotations":[68913],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[79749],"is_not":false,"summary":null,"term":"GO:0030687"}]},"dbxrefs":["InterPro:IPR022309","EnsemblGenomes-Gn:SJAG_01811","InterPro:IPR039411","UniProtKB/TrEMBL:B6JYY8","EnsemblGenomes-Tr:EEB06756"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":84,"start":54}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mdm38","uniquename":"SJAG_01806"},{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"}],"genes_by_uniquename":{"HGNC:30728":null,"SJAG_01811":null,"SPCP1E11.08":null,"YER126C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S8e","id":"PF01201","interpro_description":"Ribosomal protein eS8/ribosomal biogenesis NSA2","interpro_id":"IPR022309","interpro_name":"Ribosomal_Se8/biogenesis_NSA2","locations":[{"end":259,"start":35}],"match_end":259,"match_start":35,"name":"Ribosomal_S8e"},{"dbname":"CDD","description":"NSA2","id":"cd11381","interpro_description":"Ribosomal biogenesis NSA2 family","interpro_id":"IPR039411","interpro_name":"NSA2_fam","locations":[{"end":259,"start":4}],"match_end":259,"match_start":4,"name":"NSA2"},{"dbname":"FUNFAM","description":"NSA2, ribosome biogenesis homolog","id":"G3DSA:2.40.10.310:FF:000001","locations":[{"end":260,"start":177}],"match_end":260,"match_start":177},{"dbname":"GENE3D","id":"G3DSA:2.40.10.310","locations":[{"end":260,"start":177}],"match_end":260,"match_start":177},{"dbname":"PANTHER","id":"PTHR12642","interpro_description":"Ribosomal biogenesis NSA2 family","interpro_id":"IPR039411","interpro_name":"NSA2_fam","locations":[{"end":259,"start":1}],"match_end":259,"match_start":1,"name":"RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":84,"start":54}],"match_end":84,"match_start":54,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":73,"start":54}],"match_end":73,"match_start":54,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2408569,"start_pos":2407685,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":30,"start":20}}],"name":"nsa2","ortholog_annotations":[{"gene_uniquename":"SJAG_01811","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30728","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01811","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP1E11.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01811","ortholog_taxonid":4932,"ortholog_uniquename":"YER126C","reference_uniquename":"PMID:29761456"}],"product":"ribosome biogenesis protein Nsa2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0030684","GO:0042254","GO:0005634","GO:0005730","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000460":null,"GO:0000470":null,"GO:0005730":null,"GO:0030687":null,"GO:1902626":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01811.1"],"transcripts_by_uniquename":{"SJAG_01811.1":null},"uniprot_identifier":"B6JYY8","uniquename":"SJAG_01811"}


id: SJAG_01812
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[119307],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[119308],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01812","EnsemblGenomes-Tr:EEB06757","InterPro:IPR002110","InterPro:IPR020683","InterPro:IPR036770","UniProtKB/TrEMBL:B6JYY9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"msh1","uniquename":"SJAG_01807"},{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"}],"genes_by_uniquename":{"HGNC:14941":null,"SJAG_01812":null,"SPCP1E11.10":null,"YCR051W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ankyrin repeats (3 copies)","id":"PF12796","interpro_description":"Ankyrin repeat","interpro_id":"IPR002110","interpro_name":"Ankyrin_rpt","locations":[{"end":97,"start":10}],"match_end":97,"match_start":10,"name":"Ank_2"},{"dbname":"PROSITE_PROFILES","description":"Ankyrin repeat profile.","id":"PS50088","interpro_description":"Ankyrin repeat","interpro_id":"IPR002110","interpro_name":"Ankyrin_rpt","locations":[{"end":68,"start":36}],"match_end":68,"match_start":36,"name":"ANK_REPEAT"},{"dbname":"PROSITE_PROFILES","description":"Ankyrin repeat region circular profile.","id":"PS50297","locations":[{"end":68,"start":36}],"match_end":68,"match_start":36,"name":"ANK_REP_REGION"},{"dbname":"SMART","id":"SM00248","interpro_description":"Ankyrin repeat","interpro_id":"IPR002110","interpro_name":"Ankyrin_rpt","locations":[{"end":65,"start":36}],"match_end":65,"match_start":36,"name":"ANK_2a"},{"dbname":"SUPERFAMILY","id":"SSF48403","interpro_description":"Ankyrin repeat-containing domain superfamily","interpro_id":"IPR036770","interpro_name":"Ankyrin_rpt-contain_sf","locations":[{"end":123,"start":9}],"match_end":123,"match_start":9,"name":"Ankyrin repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.20","interpro_description":"Ankyrin repeat-containing domain superfamily","interpro_id":"IPR036770","interpro_name":"Ankyrin_rpt-contain_sf","locations":[{"end":198,"start":5}],"match_end":198,"match_start":5},{"dbname":"PANTHER","id":"PTHR24171","locations":[{"end":160,"start":9}],"match_end":160,"match_start":9,"name":"ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":2409657,"start_pos":2408918,"strand":"forward"},"name":"dhm1","ortholog_annotations":[{"gene_uniquename":"SJAG_01812","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14941","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01812","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP1E11.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01812","ortholog_taxonid":4932,"ortholog_uniquename":"YCR051W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01812","ortholog_taxonid":4932,"ortholog_uniquename":"YCR051W","reference_uniquename":"PMID:26896847"}],"product":"ankyrin repeat protein, unknown biological role","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01812.1"],"transcripts_by_uniquename":{"SJAG_01812.1":null},"uniprot_identifier":"B6JYY9","uniquename":"SJAG_01812"}


id: SJAG_01813
data:
  {"coiled_coil_coords":[{"range":{"end":52,"start":32}},{"range":{"end":98,"start":78}}],"cv_annotations":{"biological_process":[{"annotations":[119311],"is_not":false,"summary":null,"term":"GO:0042273"}],"cellular_component":[{"annotations":[73310],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[119312],"is_not":false,"summary":null,"term":"GO:0003730"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYZ0","EnsemblGenomes-Gn:SJAG_01813","EnsemblGenomes-Tr:EEB06758","InterPro:IPR011989","InterPro:IPR040059","GOA:B6JYZ0","InterPro:IPR033133","InterPro:IPR001313","InterPro:IPR012959","InterPro:IPR016024"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":116,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"taf7","uniquename":"SJAG_01808"},{"name":"apl4","uniquename":"SJAG_01809"},{"name":"cwf18","uniquename":"SJAG_01810"},{"name":"nsa2","uniquename":"SJAG_01811"},{"name":"dhm1","uniquename":"SJAG_01812"},{"name":"puf6","uniquename":"SJAG_01813"},{"name":"ade5","uniquename":"SJAG_01814"},{"uniquename":"SJAG_01815"},{"name":"yme1","uniquename":"SJAG_01816"},{"name":"vma8","uniquename":"SJAG_01817"},{"name":"csl4","uniquename":"SJAG_01818"}],"genes_by_uniquename":{"HGNC:29676":null,"SJAG_01813":null,"SPCP1E11.11":null,"YDR496C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CPL (NUC119) domain","id":"PF08144","interpro_description":"CPL domain","interpro_id":"IPR012959","interpro_name":"CPL_dom","locations":[{"end":563,"start":430}],"match_end":563,"match_start":430,"name":"CPL"},{"dbname":"PROSITE_PROFILES","description":"Pumilio homology domain (PUM-HD) profile.","id":"PS50303","interpro_description":"Pumilio homology domain","interpro_id":"IPR033133","interpro_name":"PUM-HD","locations":[{"end":508,"start":131}],"match_end":508,"match_start":131,"name":"PUM_HD"},{"dbname":"SMART","id":"SM00025","interpro_description":"Pumilio RNA-binding repeat","interpro_id":"IPR001313","interpro_name":"Pumilio_RNA-bd_rpt","locations":[{"end":268,"start":160},{"end":417,"start":345}],"match_end":417,"match_start":160,"name":"pum_5"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":464,"start":146}],"match_end":464,"match_start":146,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":640,"start":130}],"match_end":640,"match_start":130},{"dbname":"PANTHER","id":"PTHR13389","interpro_description":"Pumilio homologue 3","interpro_id":"IPR040059","interpro_name":"PUM3","locations":[{"end":630,"start":4}],"match_end":630,"match_start":4,"name":"PUMILIO HOMOLOG 3"},{"dbname":"COILS","id":"Coil","locations":[{"end":52,"start":32},{"end":98,"start":78}],"match_end":98,"match_start":32,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":116,"start":1}],"match_end":116,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":97,"start":41}],"match_end":97,"match_start":41,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":40,"start":25},{"end":110,"start":98}],"match_end":110,"match_start":25,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":24,"start":15}],"match_end":24,"match_start":15,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":2411868,"start_pos":2409940,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":98,"start":43}},{"range":{"end":629,"start":611}}],"name":"puf6","ortholog_annotations":[{"gene_uniquename":"SJAG_01813","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29676","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01813","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP1E11.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01813","ortholog_taxonid":4932,"ortholog_uniquename":"YDR496C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01813","ortholog_taxonid":4932,"ortholog_uniquename":"YDR496C","reference_uniquename":"PMID:26896847"}],"product":"pumilio family RNA-binding protein Puf6","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003730"]}},"subset_termids":["GO:0005634","GO:0042254","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003730":null,"GO:0005730":null,"GO:0042273":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01813.1"],"transcripts_by_uniquename":{"SJAG_01813.1":null},"uniprot_identifier":"B6JYZ0","uniquename":"SJAG_01813"}


