# genes

id: SJAG_02178
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"UTP","range":{"end":126,"start":126}},{"assigned_by":"UniProtKB","ligand":"UTP","range":{"end":189,"start":189}},{"assigned_by":"UniProtKB","ligand":"UTP","range":{"end":218,"start":218}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":219,"start":219}},{"assigned_by":"UniProtKB","ligand":"UTP","range":{"end":249,"start":249}},{"assigned_by":"UniProtKB","ligand":"UTP","range":{"end":391,"start":391}}],"cv_annotations":{"biological_process":[{"annotations":[72938],"is_not":false,"summary":null,"term":"GO:0005977"},{"annotations":[72939],"is_not":false,"summary":null,"term":"GO:0006011"}],"cellular_component":[{"annotations":[118880],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[118881],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[72937],"is_not":false,"summary":null,"term":"GO:0003983"}],"mondo":[{"annotations":[87047],"is_not":false,"summary":null,"term":"MONDO:0032895"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07097","EnsemblGenomes-Gn:SJAG_02178","InterPro:IPR016267","InterPro:IPR029044","UniProtKB/TrEMBL:B6K1R6","InterPro:IPR002618","GOA:B6K1R6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spb70","uniquename":"SJAG_02172"},{"name":"knh3","uniquename":"SJAG_02173"},{"name":"toa2","uniquename":"SJAG_02174"},{"name":"mae2","uniquename":"SJAG_02176"},{"name":"ent3","uniquename":"SJAG_02177"},{"name":"ugp1","uniquename":"SJAG_02178"},{"name":"qtr3b","uniquename":"SJAG_02179"},{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"}],"genes_by_uniquename":{"HGNC:12527":null,"SJAG_02178":null,"SPCC794.10":null,"YHL012W":null,"YKL035W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"UTP--glucose-1-phosphate uridylyltransferase","id":"PF01704","interpro_description":"UDPGP family","interpro_id":"IPR002618","interpro_name":"UDPGP_fam","locations":[{"end":468,"start":55}],"match_end":468,"match_start":55,"name":"UDPGP"},{"dbname":"CDD","description":"UGPase_euk","id":"cd00897","interpro_description":"UTP--glucose-1-phosphate uridylyltransferase","interpro_id":"IPR016267","interpro_name":"UDPGP_trans","locations":[{"end":405,"start":105}],"match_end":405,"match_start":105,"name":"UGPase_euk"},{"dbname":"FUNFAM","description":"UTP--glucose-1-phosphate uridylyltransferase","id":"G3DSA:3.90.550.10:FF:000002","locations":[{"end":390,"start":28}],"match_end":390,"match_start":28},{"dbname":"FUNFAM","description":"UTP--glucose-1-phosphate uridylyltransferase","id":"G3DSA:2.160.10.10:FF:000001","locations":[{"end":502,"start":391}],"match_end":502,"match_start":391},{"dbname":"SUPERFAMILY","id":"SSF53448","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":474,"start":48}],"match_end":474,"match_start":48,"name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"GENE3D","id":"G3DSA:2.160.10.10","locations":[{"end":502,"start":391}],"match_end":502,"match_start":391,"name":"Hexapeptide repeat proteins"},{"dbname":"GENE3D","id":"G3DSA:3.90.550.10","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":390,"start":17}],"match_end":390,"match_start":17,"name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PANTHER","id":"PTHR43511","interpro_description":"UTP--glucose-1-phosphate uridylyltransferase","interpro_id":"IPR016267","interpro_name":"UDPGP_trans","locations":[{"end":501,"start":50}],"match_end":501,"match_start":50},{"dbname":"PIRSF","id":"PIRSF000806","interpro_description":"UTP--glucose-1-phosphate uridylyltransferase","interpro_id":"IPR016267","interpro_name":"UDPGP_trans","locations":[{"end":502,"start":11}],"match_end":502,"match_start":11,"name":"UDPGP"}],"location":{"chromosome_name":"supercont5.1","end_pos":170644,"start_pos":169136,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":209,"start":200}},{"range":{"end":402,"start":391}}],"name":"ugp1","ortholog_annotations":[{"gene_uniquename":"SJAG_02178","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12527","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02178","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC794.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02178","ortholog_taxonid":4932,"ortholog_uniquename":"YHL012W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02178","ortholog_taxonid":4932,"ortholog_uniquename":"YHL012W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02178","ortholog_taxonid":4932,"ortholog_uniquename":"YKL035W","reference_uniquename":"PMID:29761456"}],"product":"UTP-glucose-1-phosphate uridylyltransferase-like Ugp1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003983"]}},"subset_termids":["GO:0005829","MONDO:0700092","GO:0005975","GO:0016779","MONDO:0005027","GO:0005634","GO:0006091","GO:0055086"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003983":null,"GO:0005634":null,"GO:0005829":null,"GO:0005977":null,"GO:0006011":null,"MONDO:0032895":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02178.1"],"transcripts_by_uniquename":{"SJAG_02178.1":null},"uniprot_identifier":"B6K1R6","uniquename":"SJAG_02178"}


id: SJAG_02179
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98942],"is_not":false,"summary":null,"term":"GO:0043174"},{"annotations":[98944],"is_not":false,"summary":null,"term":"GO:0002099"}],"cellular_component":[{"annotations":[98940],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[98946],"is_not":false,"summary":null,"term":"GO:0106432"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02179","InterPro:IPR019438","EnsemblGenomes-Tr:EEB07098","UniProtKB/TrEMBL:B6K1R7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"knh3","uniquename":"SJAG_02173"},{"name":"toa2","uniquename":"SJAG_02174"},{"name":"mae2","uniquename":"SJAG_02176"},{"name":"ent3","uniquename":"SJAG_02177"},{"name":"ugp1","uniquename":"SJAG_02178"},{"name":"qtr3b","uniquename":"SJAG_02179"},{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"}],"genes_by_uniquename":{"HGNC:28144":null,"SJAG_02179":null,"SPAC589.05c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Queuosine salvage protein","id":"PF10343","interpro_description":"Queuosine salvage protein family","interpro_id":"IPR019438","interpro_name":"Q_salvage","locations":[{"end":316,"start":140}],"match_end":316,"match_start":140,"name":"Q_salvage"},{"dbname":"PANTHER","id":"PTHR21314","interpro_description":"Queuosine salvage protein family","interpro_id":"IPR019438","interpro_name":"Q_salvage","locations":[{"end":317,"start":1}],"match_end":317,"match_start":1,"name":"QUEUOSINE 5'-PHOSPHATE N-GLYCOSYLASE_HYDROLASE-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":172002,"start_pos":170946,"strand":"reverse"},"name":"qtr3b","ortholog_annotations":[{"gene_uniquename":"SJAG_02179","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28144","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02179","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.05c"}],"product":"tRNA queuosine modification protein Qtr3-like","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0106432"]}},"subset_termids":["GO:0005829","GO:0055086","GO:0016798","GO:0006399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002099":null,"GO:0005829":null,"GO:0043174":null,"GO:0106432":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02179.1"],"transcripts_by_uniquename":{"SJAG_02179.1":null},"uniprot_identifier":"B6K1R7","uniquename":"SJAG_02179"}


id: SJAG_02180
data:
  {"cv_annotations":{"biological_process":[{"annotations":[118870],"is_not":false,"summary":null,"term":"GO:0002182"}],"cellular_component":[{"annotations":[118864],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[118867],"is_not":false,"summary":null,"term":"GO:0005853"}],"molecular_function":[{"annotations":[66279],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[77718],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[77717],"is_not":false,"summary":null,"term":"GO:0003746"}],"mondo":[{"annotations":[85594],"is_not":false,"summary":null,"term":"MONDO:0014625"},{"annotations":[85659],"is_not":false,"summary":null,"term":"MONDO:0014617"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K628","GOA:B6K628","InterPro:IPR004539","EnsemblGenomes-Tr:EEB07099","InterPro:IPR009000","InterPro:IPR000795","InterPro:IPR004160","InterPro:IPR004161","InterPro:IPR009001","InterPro:IPR027417","EnsemblGenomes-Gn:SJAG_02180","InterPro:IPR031157"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"toa2","uniquename":"SJAG_02174"},{"name":"mae2","uniquename":"SJAG_02176"},{"name":"ent3","uniquename":"SJAG_02177"},{"name":"ugp1","uniquename":"SJAG_02178"},{"name":"qtr3b","uniquename":"SJAG_02179"},{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"}],"genes_by_uniquename":{"HGNC:3189":null,"HGNC:3192":null,"SJAG_02180":null,"SPAC23A1.10":null,"SPBC839.15c":null,"SPCC794.09c":null,"YBR118W":null,"YPR080W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GTP-eEF1A C-terminal domain-like","id":"PF22594","interpro_description":"GTP-eEF1A, C-terminal domain","interpro_id":"IPR054696","interpro_name":"GTP-eEF1A_C","locations":[{"end":437,"start":337}],"match_end":437,"match_start":337,"name":"GTP-eEF1A_C"},{"dbname":"PFAM","description":"Elongation factor Tu GTP binding domain","id":"PF00009","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":234,"start":6}],"match_end":234,"match_start":6,"name":"GTP_EFTU"},{"dbname":"PFAM","description":"Elongation factor Tu domain 2","id":"PF03144","interpro_description":"Translation elongation factor EFTu-like, domain 2","interpro_id":"IPR004161","interpro_name":"EFTu-like_2","locations":[{"end":323,"start":258}],"match_end":323,"match_start":258,"name":"GTP_EFTU_D2"},{"dbname":"CDD","description":"EF1_alpha","id":"cd01883","locations":[{"end":236,"start":9}],"match_end":236,"match_start":9,"name":"EF1_alpha"},{"dbname":"CDD","description":"EF1_alpha_II","id":"cd03693","locations":[{"end":330,"start":240}],"match_end":330,"match_start":240,"name":"EF1_alpha_II"},{"dbname":"CDD","description":"EF1_alpha_III","id":"cd03705","locations":[{"end":436,"start":333}],"match_end":436,"match_start":333,"name":"EF1_alpha_III"},{"dbname":"PROSITE_PATTERNS","description":"Translational (tr)-type guanine nucleotide-binding (G) domain signature.","id":"PS00301","interpro_description":"Tr-type G domain, conserved site","interpro_id":"IPR031157","interpro_name":"G_TR_CS","locations":[{"end":76,"start":61}],"match_end":76,"match_start":61,"name":"G_TR_1"},{"dbname":"PROSITE_PROFILES","description":"Translational (tr)-type guanine nucleotide-binding (G) domain profile.","id":"PS51722","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":240,"start":5}],"match_end":240,"match_start":5,"name":"G_TR_2"},{"dbname":"PRINTS","description":"GTP-binding elongation factor signature","id":"PR00315","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":22,"start":9},{"end":76,"start":68},{"end":98,"start":88},{"end":115,"start":104},{"end":157,"start":148}],"match_end":157,"match_start":9,"name":"ELONGATNFCT"},{"dbname":"FUNFAM","description":"Elongation factor 1-alpha","id":"G3DSA:2.40.30.10:FF:000005","locations":[{"end":440,"start":333}],"match_end":440,"match_start":333},{"dbname":"FUNFAM","description":"Elongation factor 1-alpha","id":"G3DSA:3.40.50.300:FF:000211","locations":[{"end":236,"start":1}],"match_end":236,"match_start":1},{"dbname":"FUNFAM","description":"Elongation factor 1-alpha","id":"G3DSA:2.40.30.10:FF:000003","locations":[{"end":326,"start":239}],"match_end":326,"match_start":239},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":259,"start":3}],"match_end":259,"match_start":3,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF50465","interpro_description":"Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal","interpro_id":"IPR009001","interpro_name":"Transl_elong_EF1A/Init_IF2_C","locations":[{"end":439,"start":335}],"match_end":439,"match_start":335,"name":"EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":333,"start":241}],"match_end":333,"match_start":241,"name":"Translation proteins"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":236,"start":1}],"match_end":236,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:2.40.30.10","locations":[{"end":326,"start":239},{"end":440,"start":334}],"match_end":440,"match_start":239,"name":"Translation factors"},{"dbname":"PANTHER","id":"PTHR23115","interpro_description":"Translation factor GTPase superfamily members","interpro_id":"IPR050100","interpro_name":"TRAFAC_GTPase_members","locations":[{"end":441,"start":1}],"match_end":441,"match_start":1,"name":"TRANSLATION FACTOR"},{"dbname":"HAMAP","description":"Elongation factor Tu [tuf].","id":"MF_00118_A","interpro_description":"Translation elongation factor EF1A, eukaryotic/archaeal","interpro_id":"IPR004539","interpro_name":"Transl_elong_EF1A_euk/arc","locations":[{"end":442,"start":2}],"match_end":442,"match_start":2,"name":"EF_Tu_A"},{"dbname":"NCBIFAM","description":"translation elongation factor EF-1 subunit alpha","id":"TIGR00483","interpro_description":"Translation elongation factor EF1A, eukaryotic/archaeal","interpro_id":"IPR004539","interpro_name":"Transl_elong_EF1A_euk/arc","locations":[{"end":441,"start":1}],"match_end":441,"match_start":1,"name":"EF-1_alpha"},{"dbname":"NCBIFAM","description":"elongation factor 1-alpha","id":"NF008969","locations":[{"end":441,"start":2}],"match_end":441,"match_start":2,"name":"PRK12317.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":173804,"start_pos":172425,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":458,"start":445}}],"name":"tef101","ortholog_annotations":[{"gene_uniquename":"SJAG_02180","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3189","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3189","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3189","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3192","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3192","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3192","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.10","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC839.15c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC794.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4932,"ortholog_uniquename":"YBR118W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4932,"ortholog_uniquename":"YBR118W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4932,"ortholog_uniquename":"YBR118W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4932,"ortholog_uniquename":"YPR080W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4932,"ortholog_uniquename":"YPR080W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02180","ortholog_taxonid":4932,"ortholog_uniquename":"YPR080W","reference_uniquename":"PMID:29761456"}],"product":"translation elongation factor EF-1 alpha Ef1a","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0003924","GO:0003746"]}},"subset_termids":["MONDO:0005066","GO:0003924","MONDO:0005027","MONDO:0004736","MONDO:0000426","GO:0002181","GO:0005829","MONDO:0700092"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002182":null,"GO:0003746":null,"GO:0003924":null,"GO:0005525":null,"GO:0005829":null,"GO:0005853":null,"MONDO:0014617":null,"MONDO:0014625":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02180.1"],"transcripts_by_uniquename":{"SJAG_02180.1":null},"uniprot_identifier":"B6K628","uniquename":"SJAG_02180"}


id: SJAG_02181
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91163],"is_not":false,"summary":null,"term":"GO:0007131"},{"annotations":[91164],"is_not":false,"summary":null,"term":"GO:0000725"}],"cellular_component":[{"annotations":[91160],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91161],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[91162],"is_not":false,"summary":null,"term":"GO:0097196"}],"mondo":[{"annotations":[87654],"is_not":false,"summary":null,"term":"MONDO:0013669"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1R9","EnsemblGenomes-Gn:SJAG_02181","EnsemblGenomes-Tr:EEB07100","GOA:B6K1R9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mae2","uniquename":"SJAG_02176"},{"name":"ent3","uniquename":"SJAG_02177"},{"name":"ugp1","uniquename":"SJAG_02178"},{"name":"qtr3b","uniquename":"SJAG_02179"},{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"}],"genes_by_uniquename":{"HGNC:9823":null,"SJAG_02181":null,"SPAC17H9.03c":null,"YLR376C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":195,"start":4}],"match_end":195,"match_start":4},{"dbname":"PANTHER","id":"PTHR46457","interpro_description":"Homologous Recombination Repair RAD51 Paralog","interpro_id":"IPR051988","interpro_name":"HRR_RAD51_Paralog","locations":[{"end":189,"start":44}],"match_end":189,"match_start":44,"name":"DNA REPAIR PROTEIN RAD51 HOMOLOG 4"}],"location":{"chromosome_name":"supercont5.1","end_pos":174703,"start_pos":174062,"strand":"reverse"},"name":"rdl1","ortholog_annotations":[{"gene_uniquename":"SJAG_02181","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9823","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02181","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02181","ortholog_taxonid":4932,"ortholog_uniquename":"YLR376C","reference_uniquename":"PMID:29761456"}],"product":"RAD51D-like protein 1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0006281","GO:0006310","GO:0140013","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000725":null,"GO:0005634":null,"GO:0005829":null,"GO:0007131":null,"GO:0097196":null,"MONDO:0013669":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02181.1"],"transcripts_by_uniquename":{"SJAG_02181.1":null},"uniprot_identifier":"B6K1R9","uniquename":"SJAG_02181"}


id: SJAG_02182
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95633],"is_not":false,"summary":null,"term":"GO:1903460"},{"annotations":[60338],"is_not":false,"summary":null,"term":"GO:0070914"}],"cellular_component":[{"annotations":[95625],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[72977],"is_not":false,"summary":null,"term":"GO:0031390"},{"annotations":[95627],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72978],"is_not":false,"summary":null,"term":"GO:0031391"},{"annotations":[72975],"is_not":false,"summary":null,"term":"GO:0043599"},{"annotations":[72976],"is_not":false,"summary":null,"term":"GO:0031389"}],"molecular_function":[{"annotations":[60332],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[60334],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[60333],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[72974],"is_not":false,"summary":null,"term":"GO:0003689"},{"annotations":[95639],"is_not":false,"summary":null,"term":"GO:0061860"}]},"dbxrefs":["GOA:B6K1S0","EnsemblGenomes-Gn:SJAG_02182","InterPro:IPR027417","UniProtKB/TrEMBL:B6K1S0","InterPro:IPR008921","InterPro:IPR003593","InterPro:IPR003959","EnsemblGenomes-Tr:EEB07101","InterPro:IPR013748"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ent3","uniquename":"SJAG_02177"},{"name":"ugp1","uniquename":"SJAG_02178"},{"name":"qtr3b","uniquename":"SJAG_02179"},{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"}],"genes_by_uniquename":{"HGNC:9973":null,"SJAG_02182":null,"SPAC27E2.10c":null,"YNL290W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Replication factor C C-terminal domain","id":"PF08542","interpro_description":"Replication factor C, C-terminal","interpro_id":"IPR013748","interpro_name":"Rep_factorC_C","locations":[{"end":326,"start":241}],"match_end":326,"match_start":241,"name":"Rep_fac_C"},{"dbname":"PFAM","description":"ATPase family associated with various cellular activities (AAA)","id":"PF00004","interpro_description":"ATPase, AAA-type, core","interpro_id":"IPR003959","interpro_name":"ATPase_AAA_core","locations":[{"end":175,"start":56}],"match_end":175,"match_start":56,"name":"AAA"},{"dbname":"CDD","description":"AAA","id":"cd00009","locations":[{"end":175,"start":35}],"match_end":175,"match_start":35,"name":"AAA"},{"dbname":"CDD","description":"HLD_clamp_RFC","id":"cd18140","interpro_description":"Replication factor C, lid domain","interpro_id":"IPR047854","interpro_name":"RFC_lid","locations":[{"end":238,"start":176}],"match_end":238,"match_start":176,"name":"HLD_clamp_RFC"},{"dbname":"SMART","id":"SM00382","interpro_description":"AAA+ ATPase domain","interpro_id":"IPR003593","interpro_name":"AAA+_ATPase","locations":[{"end":179,"start":52}],"match_end":179,"match_start":52,"name":"AAA_5"},{"dbname":"FUNFAM","description":"Replication factor C subunit 5","id":"G3DSA:3.40.50.300:FF:000129","locations":[{"end":176,"start":14}],"match_end":176,"match_start":14},{"dbname":"FUNFAM","description":"Replication factor C subunit 5","id":"G3DSA:1.20.272.10:FF:000004","locations":[{"end":338,"start":241}],"match_end":338,"match_start":241},{"dbname":"FUNFAM","description":"Replication factor C subunit 5","id":"G3DSA:1.10.8.60:FF:000028","locations":[{"end":240,"start":178}],"match_end":240,"match_start":178},{"dbname":"SUPERFAMILY","id":"SSF48019","interpro_description":"DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal","interpro_id":"IPR008921","interpro_name":"DNA_pol3_clamp-load_cplx_C","locations":[{"end":330,"start":241}],"match_end":330,"match_start":241,"name":"post-AAA+ oligomerization domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":238,"start":19}],"match_end":238,"match_start":19,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:1.10.8.60","locations":[{"end":240,"start":177}],"match_end":240,"match_start":177},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":176,"start":10}],"match_end":176,"match_start":10},{"dbname":"GENE3D","id":"G3DSA:1.20.272.10","locations":[{"end":337,"start":241}],"match_end":337,"match_start":241},{"dbname":"PANTHER","id":"PTHR11669","interpro_description":"DNA Replication and Repair Clamp Loader Complex","interpro_id":"IPR050238","interpro_name":"DNA_Rep/Repair_Clamp_Loader","locations":[{"end":324,"start":20}],"match_end":324,"match_start":20,"name":"REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT"},{"dbname":"NCBIFAM","description":"replication factor C small subunit","id":"NF001679","locations":[{"end":330,"start":18}],"match_end":330,"match_start":18,"name":"PRK00440.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":176313,"start_pos":175065,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":234,"start":223}}],"name":"rfc3","ortholog_annotations":[{"gene_uniquename":"SJAG_02182","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9973","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02182","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27E2.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02182","ortholog_taxonid":4932,"ortholog_uniquename":"YNL290W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02182","ortholog_taxonid":4932,"ortholog_uniquename":"YNL290W","reference_uniquename":"PMID:26896847"}],"product":"DNA replication factor C complex subunit Rfc3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0003677"],"not-binding":["GO:0003689","GO:0016887","GO:0061860"]}},"subset_termids":["GO:0005634","GO:0005829","GO:0140097","GO:0006260","GO:0016887","GO:0005694","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003677":null,"GO:0003689":null,"GO:0005524":null,"GO:0005829":null,"GO:0016887":null,"GO:0031389":null,"GO:0031390":null,"GO:0031391":null,"GO:0043599":null,"GO:0061860":null,"GO:0070914":null,"GO:1903460":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02182.1"],"transcripts_by_uniquename":{"SJAG_02182.1":null},"uniprot_identifier":"B6K1S0","uniquename":"SJAG_02182"}


id: SJAG_02183
data:
  {"cv_annotations":{"PSI-MOD":[{"annotations":[80808],"is_not":false,"summary":null,"term":"MOD:00042"}],"biological_process":[{"annotations":[58126],"is_not":false,"summary":null,"term":"GO:0000160"},{"annotations":[95621],"is_not":false,"summary":null,"term":"GO:1900745"}],"cellular_component":[{"annotations":[95618],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[95619],"is_not":false,"summary":null,"term":"GO:0009365"}],"molecular_function":[{"annotations":[58124],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[95623],"is_not":false,"summary":null,"term":"GO:0140442"},{"annotations":[58122],"is_not":false,"summary":null,"term":"GO:0000155"}]},"dbxrefs":["InterPro:IPR000719","InterPro:IPR004358","InterPro:IPR011006","InterPro:IPR029016","InterPro:IPR003594","EnsemblGenomes-Tr:EEB07102","InterPro:IPR000014","InterPro:IPR036097","InterPro:IPR005467","InterPro:IPR001789","InterPro:IPR003018","InterPro:IPR027417","InterPro:IPR003661","InterPro:IPR011009","EnsemblGenomes-Gn:SJAG_02183","InterPro:IPR035965","InterPro:IPR036890","UniProtKB/TrEMBL:B6K1S1","GOA:B6K1S1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ugp1","uniquename":"SJAG_02178"},{"name":"qtr3b","uniquename":"SJAG_02179"},{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"}],"genes_by_uniquename":{"SJAG_02183":null,"SPAC27E2.09":null,"YIL147C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PAS domain","id":"PF13426","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":1741,"start":1640}],"match_end":1741,"match_start":1640,"name":"PAS_9"},{"dbname":"PFAM","description":"Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase","id":"PF02518","interpro_description":"Histidine kinase/HSP90-like ATPase domain","interpro_id":"IPR003594","interpro_name":"HATPase_dom","locations":[{"end":1985,"start":1869}],"match_end":1985,"match_start":1869,"name":"HATPase_c"},{"dbname":"PFAM","description":"Response regulator receiver domain","id":"PF00072","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":2298,"start":2180}],"match_end":2298,"match_start":2180,"name":"Response_reg"},{"dbname":"PFAM","description":"His Kinase A (phospho-acceptor) domain","id":"PF00512","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain","interpro_id":"IPR003661","interpro_name":"HisK_dim/P_dom","locations":[{"end":1820,"start":1756}],"match_end":1820,"match_start":1756,"name":"HisKA"},{"dbname":"CDD","description":"REC_hyHK_CKI1_RcsC-like","id":"cd17546","locations":[{"end":2298,"start":2180}],"match_end":2298,"match_start":2180,"name":"REC_hyHK_CKI1_RcsC-like"},{"dbname":"CDD","description":"PAS","id":"cd00130","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":1739,"start":1642}],"match_end":1739,"match_start":1642,"name":"PAS"},{"dbname":"CDD","description":"HATPase_EvgS-ArcB-TorS-like","id":"cd16922","locations":[{"end":1984,"start":1873}],"match_end":1984,"match_start":1873,"name":"HATPase_EvgS-ArcB-TorS-like"},{"dbname":"CDD","description":"HisKA","id":"cd00082","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain","interpro_id":"IPR003661","interpro_name":"HisK_dim/P_dom","locations":[{"end":1815,"start":1753}],"match_end":1815,"match_start":1753,"name":"HisKA"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":292,"start":1}],"match_end":292,"match_start":1,"name":"PROTEIN_KINASE_DOM"},{"dbname":"PROSITE_PROFILES","description":"PAS repeat profile.","id":"PS50112","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":1699,"start":1626}],"match_end":1699,"match_start":1626,"name":"PAS"},{"dbname":"PROSITE_PROFILES","description":"Response regulatory domain profile.","id":"PS50110","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":2302,"start":2179}],"match_end":2302,"match_start":2179,"name":"RESPONSE_REGULATORY"},{"dbname":"PROSITE_PROFILES","description":"Histidine kinase domain profile.","id":"PS50109","interpro_description":"Histidine kinase domain","interpro_id":"IPR005467","interpro_name":"His_kinase_dom","locations":[{"end":1986,"start":1762}],"match_end":1986,"match_start":1762,"name":"HIS_KIN"},{"dbname":"SMART","id":"SM00065","interpro_description":"GAF domain","interpro_id":"IPR003018","interpro_name":"GAF","locations":[{"end":1603,"start":1451}],"match_end":1603,"match_start":1451,"name":"gaf_1"},{"dbname":"SMART","id":"SM00448","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":2298,"start":2178}],"match_end":2298,"match_start":2178,"name":"REC_2"},{"dbname":"SMART","id":"SM00388","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain","interpro_id":"IPR003661","interpro_name":"HisK_dim/P_dom","locations":[{"end":1820,"start":1755}],"match_end":1820,"match_start":1755,"name":"HisKA_10"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":292,"start":39}],"match_end":292,"match_start":39,"name":"serkin_6"},{"dbname":"SMART","id":"SM00091","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":1695,"start":1628}],"match_end":1695,"match_start":1628,"name":"pas_2"},{"dbname":"SMART","id":"SM00387","interpro_description":"Histidine kinase/HSP90-like ATPase domain","interpro_id":"IPR003594","interpro_name":"HATPase_dom","locations":[{"end":1986,"start":1868}],"match_end":1986,"match_start":1868,"name":"HKATPase_4"},{"dbname":"PRINTS","description":"Bacterial sensor protein C-terminal signature","id":"PR00344","interpro_description":"Signal transduction histidine kinase-related protein, C-terminal","interpro_id":"IPR004358","interpro_name":"Sig_transdc_His_kin-like_C","locations":[{"end":1925,"start":1911},{"end":1939,"start":1929},{"end":1964,"start":1946},{"end":1983,"start":1970}],"match_end":1983,"match_start":1911,"name":"BCTRLSENSOR"},{"dbname":"FUNFAM","description":"Sensor histidine kinase RcsC","id":"G3DSA:3.30.565.10:FF:000010","locations":[{"end":1988,"start":1819}],"match_end":1988,"match_start":1819},{"dbname":"FUNFAM","description":"Two-component osmosensing histidine kinase","id":"G3DSA:1.10.287.130:FF:000002","locations":[{"end":1821,"start":1742}],"match_end":1821,"match_start":1742},{"dbname":"SUPERFAMILY","id":"SSF55785","interpro_description":"PAS domain superfamily","interpro_id":"IPR035965","interpro_name":"PAS-like_dom_sf","locations":[{"end":1745,"start":1633}],"match_end":1745,"match_start":1633,"name":"PYP-like sensor domain (PAS domain)"},{"dbname":"SUPERFAMILY","id":"SSF47384","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily","interpro_id":"IPR036097","interpro_name":"HisK_dim/P_sf","locations":[{"end":1822,"start":1743}],"match_end":1822,"match_start":1743,"name":"Homodimeric domain of signal transducing histidine kinase"},{"dbname":"SUPERFAMILY","id":"SSF55781","locations":[{"end":1618,"start":1440}],"match_end":1618,"match_start":1440,"name":"GAF domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":345,"start":332},{"end":483,"start":382},{"end":641,"start":530}],"match_end":641,"match_start":332,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF52172","interpro_description":"CheY-like superfamily","interpro_id":"IPR011006","interpro_name":"CheY-like_superfamily","locations":[{"end":2301,"start":2176}],"match_end":2301,"match_start":2176,"name":"CheY-like"},{"dbname":"SUPERFAMILY","id":"SSF55874","interpro_description":"Histidine kinase/HSP90-like ATPase superfamily","interpro_id":"IPR036890","interpro_name":"HATPase_C_sf","locations":[{"end":1982,"start":1809}],"match_end":1982,"match_start":1809,"name":"ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":295,"start":44}],"match_end":295,"match_start":44,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":306,"start":109}],"match_end":306,"match_start":109,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.450.20","locations":[{"end":1738,"start":1621}],"match_end":1738,"match_start":1621,"name":"PAS domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2300","locations":[{"end":2301,"start":2160}],"match_end":2301,"match_start":2160},{"dbname":"GENE3D","id":"G3DSA:3.30.450.40","interpro_description":"GAF-like domain superfamily","interpro_id":"IPR029016","interpro_name":"GAF-like_dom_sf","locations":[{"end":1618,"start":1429}],"match_end":1618,"match_start":1429},{"dbname":"GENE3D","id":"G3DSA:1.10.287.130","locations":[{"end":1818,"start":1739}],"match_end":1818,"match_start":1739},{"dbname":"GENE3D","id":"G3DSA:3.30.565.10","interpro_description":"Histidine kinase/HSP90-like ATPase superfamily","interpro_id":"IPR036890","interpro_name":"HATPase_C_sf","locations":[{"end":1989,"start":1819}],"match_end":1989,"match_start":1819},{"dbname":"PANTHER","id":"PTHR43719","interpro_description":"Two-component system histidine kinase","interpro_id":"IPR050956","interpro_name":"2C_system_His_kinase","locations":[{"end":2300,"start":1597}],"match_end":2300,"match_start":1597,"name":"TWO-COMPONENT HISTIDINE KINASE"},{"dbname":"NCBIFAM","description":"PAS domain S-box protein","id":"TIGR00229","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":1748,"start":1629}],"match_end":1748,"match_start":1629,"name":"sensory_box"}],"location":{"chromosome_name":"supercont5.1","end_pos":183544,"start_pos":176633,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":395,"start":383}},{"range":{"end":2140,"start":2128}}],"name":"mak2","ortholog_annotations":[{"gene_uniquename":"SJAG_02183","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27E2.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02183","ortholog_taxonid":4932,"ortholog_uniquename":"YIL147C","reference_uniquename":"PMID:29761456"}],"product":"phosphorelay sensor kinase Mak2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0140442","GO:0000155"]}},"subset_termids":["GO:0023052","GO:0098772","GO:0004672","GO:0140299","GO:0016301","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000155":null,"GO:0000160":null,"GO:0005524":null,"GO:0005737":null,"GO:0009365":null,"GO:0140442":null,"GO:1900745":null,"MOD:00042":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02183.1"],"transcripts_by_uniquename":{"SJAG_02183.1":null},"uniprot_identifier":"B6K1S1","uniquename":"SJAG_02183"}


id: SJAG_02184
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":283,"start":1}}],"cv_annotations":{"biological_process":[{"annotations":[76955],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[76953],"is_not":false,"summary":null,"term":"GO:0000028"}],"cellular_component":[{"annotations":[76954],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[111997],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[76952],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[86739],"is_not":false,"summary":null,"term":"MONDO:0010066"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02184","InterPro:IPR001865","InterPro:IPR005707","InterPro:IPR027498","InterPro:IPR023591","EnsemblGenomes-Tr:EEB07103","GOA:B6K1S2","UniProtKB/Swiss-Prot:B6K1S2","InterPro:IPR018130"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":283,"start":254}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"qtr3b","uniquename":"SJAG_02179"},{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"}],"genes_by_uniquename":{"HGNC:6502":null,"SJAG_02184":null,"SPAPJ698.02c":null,"SPBC685.06":null,"YGR214W":null,"YLR048W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S2","id":"PF00318","interpro_description":"Small ribosomal subunit protein uS2","interpro_id":"IPR001865","interpro_name":"Ribosomal_uS2","locations":[{"end":184,"start":115}],"match_end":184,"match_start":115,"name":"Ribosomal_S2"},{"dbname":"CDD","description":"RPS2","id":"cd01425","interpro_description":"Small ribosomal subunit protein uS2","interpro_id":"IPR001865","interpro_name":"Ribosomal_uS2","locations":[{"end":187,"start":21}],"match_end":187,"match_start":21,"name":"RPS2"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein S2 signature 2.","id":"PS00963","interpro_description":"Small ribosomal subunit protein uS2, conserved site","interpro_id":"IPR018130","interpro_name":"Ribosomal_uS2_CS","locations":[{"end":146,"start":122}],"match_end":146,"match_start":122,"name":"RIBOSOMAL_S2_2"},{"dbname":"PRINTS","description":"Ribosomal protein S2 signature","id":"PR00395","interpro_description":"Small ribosomal subunit protein uS2","interpro_id":"IPR001865","interpro_name":"Ribosomal_uS2","locations":[{"end":36,"start":18},{"end":57,"start":48},{"end":114,"start":97},{"end":150,"start":122},{"end":174,"start":160}],"match_end":174,"match_start":18,"name":"RIBOSOMALS2"},{"dbname":"FUNFAM","description":"40S ribosomal protein S0","id":"G3DSA:3.40.50.10490:FF:000010","locations":[{"end":223,"start":17}],"match_end":223,"match_start":17},{"dbname":"SUPERFAMILY","id":"SSF52313","interpro_description":"Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily","interpro_id":"IPR023591","interpro_name":"Ribosomal_uS2_flav_dom_sf","locations":[{"end":203,"start":14}],"match_end":203,"match_start":14,"name":"Ribosomal protein S2"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10490","locations":[{"end":223,"start":17}],"match_end":223,"match_start":17},{"dbname":"PANTHER","id":"PTHR11489","interpro_description":"Small ribosomal subunit protein uS2, eukaryotic/archaeal","interpro_id":"IPR005707","interpro_name":"Ribosomal_uS2_euk/arc","locations":[{"end":281,"start":9}],"match_end":281,"match_start":9,"name":"40S RIBOSOMAL PROTEIN SA"},{"dbname":"HAMAP","description":"Small ribosomal subunit protein uS2 [rps-0].","id":"MF_03015","interpro_description":"Small ribosomal subunit protein uS2, eukaryotic","interpro_id":"IPR027498","interpro_name":"Ribosomal_uS2_euk","locations":[{"end":264,"start":5}],"match_end":264,"match_start":5,"name":"Ribosomal_S2_euk"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":283,"start":254}],"match_end":283,"match_start":254,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":283,"start":267}],"match_end":283,"match_start":267,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"30S ribosomal protein S2","id":"TIGR01012","interpro_description":"Small ribosomal subunit protein uS2, eukaryotic/archaeal","interpro_id":"IPR005707","interpro_name":"Ribosomal_uS2_euk/arc","locations":[{"end":208,"start":14}],"match_end":208,"match_start":14,"name":"uS2_euk_arch"}],"location":{"chromosome_name":"supercont5.1","end_pos":185265,"start_pos":184414,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":239,"start":210}}],"name":"rps002","ortholog_annotations":[{"gene_uniquename":"SJAG_02184","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6502","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02184","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6502","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02184","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPJ698.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02184","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC685.06","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02184","ortholog_taxonid":4932,"ortholog_uniquename":"YGR214W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02184","ortholog_taxonid":4932,"ortholog_uniquename":"YGR214W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02184","ortholog_taxonid":4932,"ortholog_uniquename":"YLR048W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02184","ortholog_taxonid":4932,"ortholog_uniquename":"YLR048W","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S0B","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0022626","MONDO:0005046","GO:0065003","GO:0002181","GO:0005829","GO:0042254","GO:0005198","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000028":null,"GO:0002181":null,"GO:0003735":null,"GO:0005634":null,"GO:0022627":null,"MONDO:0010066":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02184.1"],"transcripts_by_uniquename":{"SJAG_02184.1":null},"uniprot_identifier":"B6K1S2","uniquename":"SJAG_02184"}


id: SJAG_02185
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74468],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[102104],"is_not":false,"summary":null,"term":"GO:0000245"}],"cellular_component":[{"annotations":[74469],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[102102],"is_not":false,"summary":null,"term":"GO:0071004"}],"molecular_function":[{"annotations":[74467],"is_not":false,"summary":null,"term":"GO:0030620"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07104","GOA:B6K1S3","InterPro:IPR015943","InterPro:IPR036322","UniProtKB/TrEMBL:B6K1S3","EnsemblGenomes-Gn:SJAG_02185","InterPro:IPR004871"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tef101","uniquename":"SJAG_02180"},{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"}],"genes_by_uniquename":{"HGNC:10770":null,"SJAG_02185":null,"SPAPJ698.03c":null,"YML049C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RSE1/DDB1/CPSF1 second beta-propeller","id":"PF23726","locations":[{"end":769,"start":451}],"match_end":769,"match_start":451,"name":"Beta-prop_RSE1_2nd"},{"dbname":"PFAM","description":"CPSF A subunit region","id":"PF03178","interpro_description":"Cleavage/polyadenylation specificity factor, A subunit, C-terminal","interpro_id":"IPR004871","interpro_name":"Cleavage/polyA-sp_fac_asu_C","locations":[{"end":1133,"start":819}],"match_end":1133,"match_start":819,"name":"CPSF_A"},{"dbname":"PFAM","description":"RSE1/DDB1/CPSF1 first beta-propeller","id":"PF10433","interpro_description":"RSE1/DDB1/CPSF1, first beta-propeller domain","interpro_id":"IPR018846","interpro_name":"Beta-prop_RSE1/DDB1/CPSF1_1st","locations":[{"end":411,"start":20}],"match_end":411,"match_start":20,"name":"Beta-prop_RSE1_1st"},{"dbname":"FUNFAM","description":"Splicing factor 3b subunit 3","id":"G3DSA:2.130.10.10:FF:000031","locations":[{"end":774,"start":453}],"match_end":774,"match_start":453},{"dbname":"FUNFAM","description":"Pre-mRNA-splicing factor rse-1, putative","id":"G3DSA:2.130.10.10:FF:001143","locations":[{"end":414,"start":19}],"match_end":414,"match_start":19},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":176,"start":33},{"end":368,"start":346},{"end":646,"start":530},{"end":968,"start":819}],"match_end":968,"match_start":33,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":376,"start":10},{"end":774,"start":402},{"end":1077,"start":776}],"match_end":1077,"match_start":10},{"dbname":"GENE3D","id":"G3DSA:1.10.150.910","locations":[{"end":1163,"start":1085}],"match_end":1163,"match_start":1085},{"dbname":"PANTHER","id":"PTHR10644","interpro_description":"RSE1/DDB1/CFT1/CPSF1","interpro_id":"IPR050358","interpro_name":"RSE1/DDB1/CFT1/CPSF1","locations":[{"end":1154,"start":9}],"match_end":1154,"match_start":9,"name":"DNA REPAIR/RNA PROCESSING CPSF FAMILY"}],"location":{"chromosome_name":"supercont5.1","end_pos":189172,"start_pos":185672,"strand":"reverse"},"name":"prp12","ortholog_annotations":[{"gene_uniquename":"SJAG_02185","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10770","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02185","ortholog_taxonid":4896,"ortholog_uniquename":"SPAPJ698.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02185","ortholog_taxonid":4932,"ortholog_uniquename":"YML049C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02185","ortholog_taxonid":4932,"ortholog_uniquename":"YML049C","reference_uniquename":"PMID:26896847"}],"product":"U2 snRNP-associated protein, WD repeat protein Sap130","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030620"]}},"subset_termids":["GO:0065003","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000245":null,"GO:0005686":null,"GO:0030620":null,"GO:0045292":null,"GO:0071004":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02185.1"],"transcripts_by_uniquename":{"SJAG_02185.1":null},"uniprot_identifier":"B6K1S3","uniquename":"SJAG_02185"}


id: SJAG_02186
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74294],"is_not":false,"summary":null,"term":"GO:0031145"},{"annotations":[92114],"is_not":false,"summary":null,"term":"GO:0051306"}],"cellular_component":[{"annotations":[74293],"is_not":false,"summary":null,"term":"GO:0005680"},{"annotations":[92108],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[92109],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92110],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[74292],"is_not":false,"summary":null,"term":"GO:0034399"}]},"dbxrefs":["InterPro:IPR036322","InterPro:IPR015943","GOA:B6K1S4","UniProtKB/TrEMBL:B6K1S4","InterPro:IPR024790","EnsemblGenomes-Tr:EEB07105","EnsemblGenomes-Gn:SJAG_02186","InterPro:IPR024977","InterPro:IPR024789"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rdl1","uniquename":"SJAG_02181"},{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"}],"genes_by_uniquename":{"HGNC:19990":null,"SJAG_02186":null,"SPAC19G12.01c":null,"YDR118W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Apc4 WD40 domain C-terminal half, fungal","id":"PF23407","interpro_description":"Apc4, C-terminal half WD40 domain, schizosaccharomycetes","interpro_id":"IPR056357","interpro_name":"Apc4_C_schizosaccharomycetes","locations":[{"end":722,"start":566}],"match_end":722,"match_start":566,"name":"WD40_Apc4_C_fungal"},{"dbname":"PFAM","description":"Anaphase-promoting complex, cyclosome, subunit 4","id":"PF12896","interpro_description":"Anaphase-promoting complex subunit 4, long domain","interpro_id":"IPR024790","interpro_name":"APC4_long_dom","locations":[{"end":441,"start":239}],"match_end":441,"match_start":239,"name":"ANAPC4"},{"dbname":"PFAM","description":"Anaphase-promoting complex subunit 4 WD40 domain","id":"PF12894","interpro_description":"Anaphase-promoting complex subunit 4-like, WD40 domain","interpro_id":"IPR024977","interpro_name":"Apc4-like_WD40_dom","locations":[{"end":120,"start":33}],"match_end":120,"match_start":33,"name":"ANAPC4_WD40"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":120,"start":23}],"match_end":120,"match_start":23,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":140,"start":3}],"match_end":140,"match_start":3},{"dbname":"PANTHER","id":"PTHR13260","interpro_description":"Anaphase-promoting complex subunit 4","interpro_id":"IPR024789","interpro_name":"APC4","locations":[{"end":721,"start":8}],"match_end":721,"match_start":8,"name":"ANAPHASE PROMOTING COMPLEX SUBUNIT 4  APC4"}],"location":{"chromosome_name":"supercont5.1","end_pos":191735,"start_pos":189376,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":150,"start":139}}],"name":"cut20","ortholog_annotations":[{"gene_uniquename":"SJAG_02186","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19990","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02186","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02186","ortholog_taxonid":4932,"ortholog_uniquename":"YDR118W","reference_uniquename":"PMID:29761456"}],"product":"anaphase-promoting complex platform subcomplex scaffold WD repeat subunit Apc4/Cut20","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0000070","GO:0015630","GO:0005816","GO:0005634","GO:0030163","GO:0034399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005680":null,"GO:0005829":null,"GO:0031145":null,"GO:0032153":null,"GO:0034399":null,"GO:0044732":null,"GO:0051306":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02186.1"],"transcripts_by_uniquename":{"SJAG_02186.1":null},"uniprot_identifier":"B6K1S4","uniquename":"SJAG_02186"}


id: SJAG_02187
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92118],"is_not":false,"summary":null,"term":"GO:0043570"},{"annotations":[92119],"is_not":false,"summary":null,"term":"GO:0000710"}],"cellular_component":[{"annotations":[71109],"is_not":false,"summary":null,"term":"GO:0032389"},{"annotations":[92116],"is_not":false,"summary":null,"term":"GO:0000228"}],"molecular_function":[{"annotations":[58082],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[71108],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[58085],"is_not":false,"summary":null,"term":"GO:0140664"},{"annotations":[58083],"is_not":false,"summary":null,"term":"GO:0030983"}],"mondo":[{"annotations":[86003],"is_not":false,"summary":null,"term":"MONDO:0013699"},{"annotations":[86057],"is_not":false,"summary":null,"term":"MONDO:0030843"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02187","InterPro:IPR037198","GOA:B6K1S5","InterPro:IPR002099","InterPro:IPR038973","InterPro:IPR014762","InterPro:IPR042121","InterPro:IPR014790","InterPro:IPR013507","InterPro:IPR036890","UniProtKB/TrEMBL:B6K1S5","InterPro:IPR020568","EnsemblGenomes-Tr:EEB07106","InterPro:IPR014721","InterPro:IPR042120"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rfc3","uniquename":"SJAG_02182"},{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"}],"genes_by_uniquename":{"HGNC:9122":null,"SJAG_02187":null,"SPAC19G12.02c":null,"YNL082W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MutL C terminal dimerisation domain","id":"PF08676","interpro_description":"MutL, C-terminal, dimerisation","interpro_id":"IPR014790","interpro_name":"MutL_C","locations":[{"end":734,"start":591}],"match_end":734,"match_start":591,"name":"MutL_C"},{"dbname":"PFAM","description":"Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase","id":"PF13589","locations":[{"end":118,"start":23}],"match_end":118,"match_start":23,"name":"HATPase_c_3"},{"dbname":"PFAM","description":"DNA mismatch repair protein, C-terminal domain","id":"PF01119","interpro_description":"DNA mismatch repair protein, S5 domain 2-like","interpro_id":"IPR013507","interpro_name":"DNA_mismatch_S5_2-like","locations":[{"end":296,"start":217}],"match_end":296,"match_start":217,"name":"DNA_mis_repair"},{"dbname":"CDD","description":"HATPase_MutL-MLH-PMS-like","id":"cd16926","locations":[{"end":196,"start":10}],"match_end":196,"match_start":10,"name":"HATPase_MutL-MLH-PMS-like"},{"dbname":"PROSITE_PATTERNS","description":"DNA mismatch repair proteins mutL / hexB / PMS1 signature.","id":"PS00058","interpro_description":"DNA mismatch repair, conserved site","interpro_id":"IPR014762","interpro_name":"DNA_mismatch_repair_CS","locations":[{"end":99,"start":93}],"match_end":99,"match_start":93,"name":"DNA_MISMATCH_REPAIR_1"},{"dbname":"SMART","id":"SM01340","interpro_description":"DNA mismatch repair protein, S5 domain 2-like","interpro_id":"IPR013507","interpro_name":"DNA_mismatch_S5_2-like","locations":[{"end":309,"start":216}],"match_end":309,"match_start":216,"name":"DNA_mis_repair_2"},{"dbname":"SMART","id":"SM00853","interpro_description":"MutL, C-terminal, dimerisation","interpro_id":"IPR014790","interpro_name":"MutL_C","locations":[{"end":734,"start":590}],"match_end":734,"match_start":590,"name":"MutL_C_2"},{"dbname":"FUNFAM","description":"Mismatch repair endonuclease pms1, putative","id":"G3DSA:3.30.565.10:FF:000014","locations":[{"end":220,"start":1}],"match_end":220,"match_start":1},{"dbname":"FUNFAM","description":"Mismatch repair endonuclease pms1, putative","id":"G3DSA:3.30.1370.100:FF:000001","locations":[{"end":729,"start":630}],"match_end":729,"match_start":630},{"dbname":"SUPERFAMILY","id":"SSF55874","interpro_description":"Histidine kinase/HSP90-like ATPase superfamily","interpro_id":"IPR036890","interpro_name":"HATPase_C_sf","locations":[{"end":218,"start":17}],"match_end":218,"match_start":17,"name":"ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"},{"dbname":"SUPERFAMILY","id":"SSF118116","interpro_description":"MutL, C-terminal domain superfamily","interpro_id":"IPR037198","interpro_name":"MutL_C_sf","locations":[{"end":765,"start":588}],"match_end":765,"match_start":588,"name":"DNA mismatch repair protein MutL"},{"dbname":"SUPERFAMILY","id":"SSF54211","interpro_description":"Ribosomal protein uS5 domain 2-type superfamily","interpro_id":"IPR020568","interpro_name":"Ribosomal_Su5_D2-typ_SF","locations":[{"end":298,"start":199}],"match_end":298,"match_start":199,"name":"Ribosomal protein S5 domain 2-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.1540.20","interpro_description":"MutL, C-terminal domain, dimerisation subdomain","interpro_id":"IPR042120","interpro_name":"MutL_C_dimsub","locations":[{"end":629,"start":593},{"end":765,"start":730}],"match_end":765,"match_start":593},{"dbname":"GENE3D","id":"G3DSA:3.30.230.10","interpro_description":"Small ribosomal subunit protein uS5 domain 2-type fold, subgroup","interpro_id":"IPR014721","interpro_name":"Ribsml_uS5_D2-typ_fold_subgr","locations":[{"end":299,"start":224}],"match_end":299,"match_start":224},{"dbname":"GENE3D","id":"G3DSA:3.30.1370.100","interpro_description":"MutL, C-terminal domain, regulatory subdomain","interpro_id":"IPR042121","interpro_name":"MutL_C_regsub","locations":[{"end":729,"start":630}],"match_end":729,"match_start":630},{"dbname":"GENE3D","id":"G3DSA:3.30.565.10","interpro_description":"Histidine kinase/HSP90-like ATPase superfamily","interpro_id":"IPR036890","interpro_name":"HATPase_C_sf","locations":[{"end":220,"start":1}],"match_end":220,"match_start":1},{"dbname":"PANTHER","id":"PTHR10073","interpro_description":"DNA mismatch repair protein MutL/Mlh/Pms-like","interpro_id":"IPR038973","interpro_name":"MutL/Mlh/Pms-like","locations":[{"end":769,"start":1}],"match_end":769,"match_start":1,"name":"DNA MISMATCH REPAIR PROTEIN  MLH, PMS, MUTL"},{"dbname":"NCBIFAM","description":"DNA mismatch repair endonuclease MutL","id":"TIGR00585","interpro_description":"DNA mismatch repair protein MutL/Mlh/PMS","interpro_id":"IPR002099","interpro_name":"MutL/Mlh/PMS","locations":[{"end":297,"start":3}],"match_end":297,"match_start":3,"name":"mutl"}],"location":{"chromosome_name":"supercont5.1","end_pos":194684,"start_pos":191967,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":570,"start":561}},{"range":{"end":651,"start":640}}],"name":"pms1","ortholog_annotations":[{"gene_uniquename":"SJAG_02187","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9122","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02187","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02187","ortholog_taxonid":4932,"ortholog_uniquename":"YNL082W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02187","ortholog_taxonid":4932,"ortholog_uniquename":"YNL082W","reference_uniquename":"PMID:26896847"}],"product":"MutL family mismatch-repair protein Pms1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030983","GO:0005524"],"not-binding":["GO:0016887","GO:0140664"]}},"subset_termids":["GO:0005694","MONDO:0000426","GO:0140097","GO:0098772","GO:0140299","MONDO:0021190","MONDO:0004992","GO:0016887","MONDO:0004335","MONDO:0005066","GO:0006281","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000228":null,"GO:0000710":null,"GO:0005524":null,"GO:0016887":null,"GO:0030983":null,"GO:0032389":null,"GO:0043570":null,"GO:0140664":null,"MONDO:0013699":null,"MONDO:0030843":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02187.1"],"transcripts_by_uniquename":{"SJAG_02187.1":null},"uniprot_identifier":"B6K1S5","uniquename":"SJAG_02187"}


id: SJAG_02189
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109540],"is_not":false,"summary":null,"term":"GO:0002182"},{"annotations":[109542],"is_not":false,"summary":null,"term":"GO:0002184"},{"annotations":[66637],"is_not":false,"summary":null,"term":"GO:0045901"},{"annotations":[66638],"is_not":false,"summary":null,"term":"GO:0045905"}],"cellular_component":[{"annotations":[109536],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95480],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[66636],"is_not":false,"summary":null,"term":"GO:0043022"},{"annotations":[109550],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[77998],"is_not":false,"summary":null,"term":"GO:0003746"},{"annotations":[109554],"is_not":false,"summary":null,"term":"GO:0008079"}],"mondo":[{"annotations":[86920],"is_not":false,"summary":null,"term":"MONDO:0859163"}]},"dbxrefs":["InterPro:IPR012340","InterPro:IPR014722","InterPro:IPR001884","EnsemblGenomes-Gn:SJAG_02189","InterPro:IPR020189","InterPro:IPR019769","UniProtKB/TrEMBL:B6K1S7","GOA:B6K1S7","InterPro:IPR008991","EnsemblGenomes-Tr:EEB07108"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mak2","uniquename":"SJAG_02183"},{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"}],"genes_by_uniquename":{"HGNC:3300":null,"HGNC:3301":null,"SJAG_02189":null,"SPAC26H5.10c":null,"SPBC336.10c":null,"YEL034W":null,"YJR047C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Translation initiation factor 5A-like, N-terminal","id":"PF21485","interpro_description":"Translation initiation factor 5A-like, N-terminal","interpro_id":"IPR048670","interpro_name":"IF5A-like_N","locations":[{"end":78,"start":16}],"match_end":78,"match_start":16,"name":"IF5A-like_N"},{"dbname":"PFAM","description":"Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold","id":"PF01287","interpro_description":"Translation elongation factor, IF5A C-terminal","interpro_id":"IPR020189","interpro_name":"Transl_elong_IF5A_C","locations":[{"end":151,"start":84}],"match_end":151,"match_start":84,"name":"eIF-5a"},{"dbname":"CDD","description":"S1_eIF5A","id":"cd04468","locations":[{"end":153,"start":85}],"match_end":153,"match_start":85,"name":"S1_eIF5A"},{"dbname":"PROSITE_PATTERNS","description":"Eukaryotic initiation factor 5A hypusine signature.","id":"PS00302","interpro_description":"Translation elongation factor, IF5A, hypusine site","interpro_id":"IPR019769","interpro_name":"Trans_elong_IF5A_hypusine_site","locations":[{"end":56,"start":49}],"match_end":56,"match_start":49,"name":"IF5A_HYPUSINE"},{"dbname":"SMART","id":"SM01376","interpro_description":"Translation elongation factor, IF5A C-terminal","interpro_id":"IPR020189","interpro_name":"Transl_elong_IF5A_C","locations":[{"end":151,"start":84}],"match_end":151,"match_start":84,"name":"eIF_5a_2"},{"dbname":"FUNFAM","description":"Eukaryotic translation initiation factor 5A","id":"G3DSA:2.40.50.140:FF:000034","locations":[{"end":154,"start":85}],"match_end":154,"match_start":85},{"dbname":"FUNFAM","description":"Eukaryotic translation initiation factor 5A","id":"G3DSA:2.30.30.30:FF:000007","locations":[{"end":84,"start":1}],"match_end":84,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50104","interpro_description":"Translation protein SH3-like domain superfamily","interpro_id":"IPR008991","interpro_name":"Translation_prot_SH3-like_sf","locations":[{"end":92,"start":14}],"match_end":92,"match_start":14,"name":"Translation proteins SH3-like domain"},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":154,"start":85}],"match_end":154,"match_start":85,"name":"Nucleic acid-binding proteins"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.30","interpro_description":"Large ribosomal subunit protein uL2, domain 2","interpro_id":"IPR014722","interpro_name":"Rib_uL2_dom2","locations":[{"end":83,"start":1}],"match_end":83,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":156,"start":85}],"match_end":156,"match_start":85},{"dbname":"PANTHER","id":"PTHR11673","interpro_description":"Translation elongation factor IF5A-like","interpro_id":"IPR001884","interpro_name":"IF5A-like","locations":[{"end":154,"start":1}],"match_end":154,"match_start":1,"name":"TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF003025","interpro_description":"Translation elongation factor IF5A-like","interpro_id":"IPR001884","interpro_name":"IF5A-like","locations":[{"end":155,"start":1}],"match_end":155,"match_start":1,"name":"Transl_init_eIF5A"},{"dbname":"NCBIFAM","description":"translation initiation factor IF-5A","id":"TIGR00037","interpro_description":"Translation elongation factor IF5A-like","interpro_id":"IPR001884","interpro_name":"IF5A-like","locations":[{"end":147,"start":16}],"match_end":147,"match_start":16,"name":"eIF_5A"}],"location":{"chromosome_name":"supercont5.1","end_pos":199473,"start_pos":199003,"strand":"forward"},"name":"tif51","ortholog_annotations":[{"gene_uniquename":"SJAG_02189","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3300","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3300","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3301","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3301","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC336.10c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4932,"ortholog_uniquename":"YEL034W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4932,"ortholog_uniquename":"YEL034W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4932,"ortholog_uniquename":"YEL034W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4932,"ortholog_uniquename":"YJR047C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4932,"ortholog_uniquename":"YJR047C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02189","ortholog_taxonid":4932,"ortholog_uniquename":"YJR047C","reference_uniquename":"PMID:26896847"}],"product":"translation elongation and termination factor eIF5A (predicted)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043022","GO:0003723"],"not-binding":["GO:0003746","GO:0008079"]}},"subset_termids":["GO:0005634","GO:0002181","GO:0005829","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002182":null,"GO:0002184":null,"GO:0003723":null,"GO:0003746":null,"GO:0005730":null,"GO:0005829":null,"GO:0008079":null,"GO:0043022":null,"GO:0045901":null,"GO:0045905":null,"MONDO:0859163":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02189.1"],"transcripts_by_uniquename":{"SJAG_02189.1":null},"uniprot_identifier":"B6K1S7","uniquename":"SJAG_02189"}


id: SJAG_02190
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":400,"start":19}}],"cv_annotations":{"sequence":[{"annotations":[81122],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["GOA:B6K1S8","EnsemblGenomes-Gn:SJAG_02190","EnsemblGenomes-Tr:EEB07109","UniProtKB/TrEMBL:B6K1S8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps002","uniquename":"SJAG_02184"},{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"}],"genes_by_uniquename":{"SJAG_02190":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":201662,"start_pos":200460,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":140,"start":129}}],"product":"Schizosaccharomyces japonicus specific 6/7 TM domain protein family","references_by_uniquename":{"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":18,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":202,"start":180}},{"assigned_by":"TMHMM","range":{"end":274,"start":252}},{"assigned_by":"TMHMM","range":{"end":311,"start":289}},{"assigned_by":"TMHMM","range":{"end":354,"start":332}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02190.1"],"transcripts_by_uniquename":{"SJAG_02190.1":null},"uniprot_identifier":"B6K1S8","uniquename":"SJAG_02190"}


id: SJAG_02191
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":369,"start":25}}],"cv_annotations":{"biological_process":[{"annotations":[95474],"is_not":false,"summary":null,"term":"GO:0006735"}],"cellular_component":[{"annotations":[102457],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77272],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[95476],"is_not":false,"summary":null,"term":"GO:0016651"}],"sequence":[{"annotations":[80827],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR000683","InterPro:IPR036291","UniProtKB/TrEMBL:B6K1S9","EnsemblGenomes-Tr:EEB07110","GOA:B6K1S9","EnsemblGenomes-Gn:SJAG_02191","InterPro:IPR004104"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"prp12","uniquename":"SJAG_02185"},{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"}],"genes_by_uniquename":{"HGNC:21096":null,"HGNC:28159":null,"SJAG_02191":null,"SPAC26H5.09c":null,"SPBC115.03":null,"YMR315W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Oxidoreductase family, C-terminal alpha/beta domain","id":"PF02894","interpro_description":"Gfo/Idh/MocA-like oxidoreductase, C-terminal","interpro_id":"IPR004104","interpro_name":"Gfo/Idh/MocA-like_OxRdtase_C","locations":[{"end":362,"start":138}],"match_end":362,"match_start":138,"name":"GFO_IDH_MocA_C"},{"dbname":"PFAM","description":"Oxidoreductase family, NAD-binding Rossmann fold","id":"PF01408","interpro_description":"Gfo/Idh/MocA-like oxidoreductase, N-terminal","interpro_id":"IPR000683","interpro_name":"Gfo/Idh/MocA-like_OxRdtase_N","locations":[{"end":125,"start":4}],"match_end":125,"match_start":4,"name":"GFO_IDH_MocA"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":207,"start":3}],"match_end":207,"match_start":3,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":126,"start":5},{"end":338,"start":320}],"match_end":338,"match_start":5},{"dbname":"GENE3D","id":"G3DSA:3.30.360.10","locations":[{"end":319,"start":127},{"end":361,"start":339}],"match_end":361,"match_start":127,"name":"Dihydrodipicolinate Reductase; domain 2"},{"dbname":"PANTHER","id":"PTHR43708","interpro_description":"Gfo/Idh/MocA family oxidoreductases","interpro_id":"IPR051317","interpro_name":"Gfo/Idh/MocA_oxidoreduct","locations":[{"end":367,"start":1}],"match_end":367,"match_start":1,"name":"CONSERVED EXPRESSED OXIDOREDUCTASE (EUROFUNG)"}],"location":{"chromosome_name":"supercont5.1","end_pos":203312,"start_pos":202203,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":71,"start":59}},{"range":{"end":307,"start":296}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_02191","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21096","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02191","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21096","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02191","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28159","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02191","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28159","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02191","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02191","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC115.03","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02191","ortholog_taxonid":4932,"ortholog_uniquename":"YMR315W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02191","ortholog_taxonid":4932,"ortholog_uniquename":"YMR315W","reference_uniquename":"PMID:29761456"}],"product":"Gfo/Idh/MocA-like oxidoreductase, N-terminal","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":24,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016651"]}},"subset_termids":["GO:0005634","GO:0055086","GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006735":null,"GO:0016651":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02191.1"],"transcripts_by_uniquename":{"SJAG_02191.1":null},"uniprot_identifier":"B6K1S9","uniquename":"SJAG_02191"}


id: SJAG_02192
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":303,"start":25}}],"cv_annotations":{"biological_process":[{"annotations":[95468],"is_not":false,"summary":null,"term":"GO:0070879"},{"annotations":[78185],"is_not":false,"summary":null,"term":"GO:0031505"}],"cellular_component":[{"annotations":[78184],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[78182],"is_not":false,"summary":null,"term":"GO:0005576"},{"annotations":[78183],"is_not":false,"summary":null,"term":"GO:0009277"}],"molecular_function":[{"annotations":[78181],"is_not":false,"summary":null,"term":"GO:0042973"},{"annotations":[95471],"is_not":false,"summary":null,"term":"GO:0004338"}],"sequence":[{"annotations":[80906],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02192","EnsemblGenomes-Tr:EEB07111","InterPro:IPR017853","UniProtKB/TrEMBL:B6K1T0","GOA:B6K1T0","InterPro:IPR000490"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cut20","uniquename":"SJAG_02186"},{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"}],"genes_by_uniquename":{"SJAG_02192":null,"SPAC26H5.08c":null,"YGR282C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyl hydrolases family 17","id":"PF00332","interpro_description":"Glycoside hydrolase family 17","interpro_id":"IPR000490","interpro_name":"Glyco_hydro_17","locations":[{"end":303,"start":29}],"match_end":303,"match_start":29,"name":"Glyco_hydro_17"},{"dbname":"PROSITE_PATTERNS","description":"Glycosyl hydrolases family 17 signature.","id":"PS00587","interpro_description":"Glycoside hydrolase family 17","interpro_id":"IPR000490","interpro_name":"Glyco_hydro_17","locations":[{"end":236,"start":223}],"match_end":236,"match_start":223,"name":"GLYCOSYL_HYDROL_F17"},{"dbname":"SUPERFAMILY","id":"SSF51445","interpro_description":"Glycoside hydrolase superfamily","interpro_id":"IPR017853","interpro_name":"Glycoside_hydrolase_SF","locations":[{"end":303,"start":34}],"match_end":303,"match_start":34,"name":"(Trans)glycosidases"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":303,"start":57}],"match_end":303,"match_start":57,"name":"Glycosidases"},{"dbname":"PANTHER","id":"PTHR16631","interpro_description":"Beta-glucan modifying enzymes","interpro_id":"IPR050732","interpro_name":"Beta-glucan_modifiers","locations":[{"end":303,"start":11}],"match_end":303,"match_start":11,"name":"GLUCAN 1,3-BETA-GLUCOSIDASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":204626,"start_pos":203715,"strand":"forward"},"name":"bgl2","ortholog_annotations":[{"gene_uniquename":"SJAG_02192","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02192","ortholog_taxonid":4932,"ortholog_uniquename":"YGR282C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02192","ortholog_taxonid":4932,"ortholog_uniquename":"YGR282C","reference_uniquename":"PMID:26896847"}],"product":"cell wall glucan beta-glucosidase Bgl2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":24,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0042973","GO:0004338"]}},"subset_termids":["GO:0005576","GO:0005618","GO:0005975","GO:0016798","GO:0071554","GO:0009986"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004338":null,"GO:0005576":null,"GO:0009277":null,"GO:0009986":null,"GO:0031505":null,"GO:0042973":null,"GO:0070879":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02192.1"],"transcripts_by_uniquename":{"SJAG_02192.1":null},"uniprot_identifier":"B6K1T0","uniquename":"SJAG_02192"}


id: SJAG_02193
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":512,"start":23}}],"cv_annotations":{"biological_process":[{"annotations":[72041],"is_not":false,"summary":null,"term":"GO:0042147"}],"cellular_component":[{"annotations":[59227],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72039],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[72040],"is_not":false,"summary":null,"term":"GO:0016020"}],"sequence":[{"annotations":[80872],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["GOA:B6K1T1","UniProtKB/TrEMBL:B6K1T1","EnsemblGenomes-Gn:SJAG_02193","EnsemblGenomes-Tr:EEB07112","InterPro:IPR009637"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":512,"start":491}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pms1","uniquename":"SJAG_02187"},{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"}],"genes_by_uniquename":{"HGNC:24522":null,"HGNC:25913":null,"SJAG_02193":null,"SPAC26H5.07c":null,"YHL017W":null,"YKL039W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GOST, seven transmembrane domain","id":"PF06814","interpro_description":"GOST, seven transmembrane domain","interpro_id":"IPR053937","interpro_name":"GOST_TM","locations":[{"end":433,"start":181}],"match_end":433,"match_start":181,"name":"GOST_TM"},{"dbname":"PFAM","description":"PTM1-like, N-terminal domain","id":"PF21902","interpro_description":"PTM1-like, N-terminal domain","interpro_id":"IPR053938","interpro_name":"PTM1-like_N","locations":[{"end":170,"start":38}],"match_end":170,"match_start":38,"name":"PTM1-like_N"},{"dbname":"PANTHER","id":"PTHR21229","interpro_description":"Transmembrane protein GPR107/GPR108-like","interpro_id":"IPR009637","interpro_name":"GPR107/GPR108-like","locations":[{"end":473,"start":18}],"match_end":473,"match_start":18,"name":"LUNG SEVEN TRANSMEMBRANE RECEPTOR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":512,"start":491}],"match_end":512,"match_start":491,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":207175,"start_pos":205372,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_02193","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24522","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02193","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25913","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02193","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02193","ortholog_taxonid":4932,"ortholog_uniquename":"YHL017W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02193","ortholog_taxonid":4932,"ortholog_uniquename":"YHL017W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02193","ortholog_taxonid":4932,"ortholog_uniquename":"YKL039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02193","ortholog_taxonid":4932,"ortholog_uniquename":"YKL039W","reference_uniquename":"PMID:26896847"}],"product":"seven transmembrane receptor protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":22,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005794","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0005829":null,"GO:0016020":null,"GO:0042147":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":205,"start":183}},{"assigned_by":"TMHMM","range":{"end":239,"start":217}},{"assigned_by":"TMHMM","range":{"end":286,"start":264}},{"assigned_by":"TMHMM","range":{"end":315,"start":293}},{"assigned_by":"TMHMM","range":{"end":347,"start":325}},{"assigned_by":"TMHMM","range":{"end":390,"start":368}},{"assigned_by":"TMHMM","range":{"end":427,"start":405}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02193.1"],"transcripts_by_uniquename":{"SJAG_02193.1":null},"uniprot_identifier":"B6K1T1","uniquename":"SJAG_02193"}


id: SJAG_02194
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77260],"is_not":false,"summary":null,"term":"GO:0032210"},{"annotations":[77256],"is_not":false,"summary":null,"term":"GO:0016233"}],"cellular_component":[{"annotations":[95451],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95453],"is_not":false,"summary":null,"term":"GO:0070187"}],"molecular_function":[{"annotations":[77257],"is_not":false,"summary":null,"term":"GO:0098505"},{"annotations":[77259],"is_not":false,"summary":null,"term":"GO:0010521"}],"mondo":[{"annotations":[86921],"is_not":false,"summary":null,"term":"MONDO:0957264"},{"annotations":[86923],"is_not":false,"summary":null,"term":"MONDO:0957263"},{"annotations":[86789],"is_not":false,"summary":null,"term":"MONDO:0014368"}]},"dbxrefs":["InterPro:IPR032042","EnsemblGenomes-Gn:SJAG_02194","GOA:B6K1T2","InterPro:IPR028389","InterPro:IPR011564","EnsemblGenomes-Tr:EEB07113","InterPro:IPR012340","UniProtKB/TrEMBL:B6K1T2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":373,"start":343}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tif51","uniquename":"SJAG_02189"},{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"}],"genes_by_uniquename":{"HGNC:17284":null,"SJAG_02194":null,"SPAC26H5.06":null,"YDL220C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Telomeric single stranded DNA binding POT1/CDC13","id":"PF02765","interpro_description":"Telomeric single stranded DNA binding POT1/Cdc13","interpro_id":"IPR011564","interpro_name":"Telomer_end-bd_POT1/Cdc13","locations":[{"end":164,"start":35}],"match_end":164,"match_start":35,"name":"POT1"},{"dbname":"PFAM","description":"ssDNA-binding domain of telomere protection protein","id":"PF16686","interpro_description":"Protection of telomeres protein 1, ssDNA-binding domain","interpro_id":"IPR032042","interpro_name":"POT1PC","locations":[{"end":332,"start":198}],"match_end":332,"match_start":198,"name":"POT1PC"},{"dbname":"SMART","id":"SM00976","interpro_description":"Telomeric single stranded DNA binding POT1/Cdc13","interpro_id":"IPR011564","interpro_name":"Telomer_end-bd_POT1/Cdc13","locations":[{"end":168,"start":24}],"match_end":168,"match_start":24,"name":"Telo_bind_a_2"},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":167,"start":32},{"end":330,"start":198}],"match_end":330,"match_start":32,"name":"Nucleic acid-binding proteins"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":176,"start":2},{"end":333,"start":196},{"end":524,"start":373}],"match_end":524,"match_start":2},{"dbname":"PANTHER","id":"PTHR14513","interpro_description":"Protection of telomeres protein 1","interpro_id":"IPR028389","interpro_name":"POT1","locations":[{"end":549,"start":23}],"match_end":549,"match_start":23,"name":"PROTECTION OF TELOMERES 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":373,"start":343}],"match_end":373,"match_start":343,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":352,"start":343}],"match_end":352,"match_start":343,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":209469,"start_pos":207612,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":47,"start":36}},{"range":{"end":328,"start":313}}],"name":"pot1","ortholog_annotations":[{"gene_uniquename":"SJAG_02194","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17284","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02194","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02194","ortholog_taxonid":4932,"ortholog_uniquename":"YDL220C","reference_uniquename":"PMID:29761456"}],"product":"shelterin complex subunit Pot1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0098505"],"not-binding":["GO:0010521"]}},"subset_termids":["MONDO:0002320","GO:0032200","GO:0005829","GO:0098772","GO:0005694","GO:0030234","GO:0005634","MONDO:0005328","MONDO:0019303"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0010521":null,"GO:0016233":null,"GO:0032210":null,"GO:0070187":null,"GO:0098505":null,"MONDO:0014368":null,"MONDO:0957263":null,"MONDO:0957264":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02194.1"],"transcripts_by_uniquename":{"SJAG_02194.1":null},"uniprot_identifier":"B6K1T2","uniquename":"SJAG_02194"}


id: SJAG_02195
data:
  {"coiled_coil_coords":[{"range":{"end":114,"start":80}},{"range":{"end":201,"start":181}}],"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB07114","UniProtKB/TrEMBL:B6K1T3","EnsemblGenomes-Gn:SJAG_02195"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":23,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02190"},{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"}],"genes_by_uniquename":{"SJAG_02195":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":114,"start":80},{"end":201,"start":181}],"match_end":201,"match_start":80,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":23,"start":1}],"match_end":23,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":211178,"start_pos":210205,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":136,"start":124}}],"product":"Schizosaccharomyces japonicus specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_02195.1"],"transcripts_by_uniquename":{"SJAG_02195.1":null},"uniprot_identifier":"B6K1T3","uniquename":"SJAG_02195"}


id: SJAG_02196
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95446],"is_not":false,"summary":null,"term":"GO:0045834"},{"annotations":[95447],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[95443],"is_not":false,"summary":null,"term":"GO:0098554"},{"annotations":[95444],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[95445],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[95448],"is_not":false,"summary":null,"term":"GO:0003690"},{"annotations":[95449],"is_not":false,"summary":null,"term":"GO:0003713"}],"mondo":[{"annotations":[86531],"is_not":false,"summary":null,"term":"MONDO:0013886"}]},"dbxrefs":["InterPro:IPR020683","EnsemblGenomes-Gn:SJAG_02196","InterPro:IPR002110","InterPro:IPR036770","InterPro:IPR014756","InterPro:IPR013783","EnsemblGenomes-Tr:EEB07115","InterPro:IPR002909","UniProtKB/TrEMBL:B6K1T4"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":49,"start":16}},{"range":{"end":454,"start":434}},{"range":{"end":1048,"start":1014}},{"range":{"end":1090,"start":1065}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02191"},{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"}],"genes_by_uniquename":{"HGNC:18806":null,"HGNC:18807":null,"SJAG_02196":null,"SPAC26H5.05":null,"YIR033W":null,"YKL020C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ankyrin repeats (3 copies)","id":"PF12796","interpro_description":"Ankyrin repeat","interpro_id":"IPR002110","interpro_name":"Ankyrin_rpt","locations":[{"end":898,"start":839}],"match_end":898,"match_start":839,"name":"Ank_2"},{"dbname":"PFAM","description":"IPT/TIG domain","id":"PF01833","interpro_description":"IPT domain","interpro_id":"IPR002909","interpro_name":"IPT_dom","locations":[{"end":720,"start":637}],"match_end":720,"match_start":637,"name":"TIG"},{"dbname":"CDD","description":"IPT","id":"cd00102","locations":[{"end":720,"start":643}],"match_end":720,"match_start":643,"name":"IPT"},{"dbname":"PROSITE_PROFILES","description":"Ankyrin repeat profile.","id":"PS50088","interpro_description":"Ankyrin repeat","interpro_id":"IPR002110","interpro_name":"Ankyrin_rpt","locations":[{"end":902,"start":837}],"match_end":902,"match_start":837,"name":"ANK_REPEAT"},{"dbname":"PROSITE_PROFILES","description":"Ankyrin repeat region circular profile.","id":"PS50297","locations":[{"end":868,"start":837},{"end":898,"start":870}],"match_end":898,"match_start":837,"name":"ANK_REP_REGION"},{"dbname":"SMART","id":"SM00429","interpro_description":"IPT domain","interpro_id":"IPR002909","interpro_name":"IPT_dom","locations":[{"end":721,"start":636}],"match_end":721,"match_start":636,"name":"iptmega2"},{"dbname":"SMART","id":"SM00248","interpro_description":"Ankyrin repeat","interpro_id":"IPR002110","interpro_name":"Ankyrin_rpt","locations":[{"end":866,"start":837},{"end":899,"start":870}],"match_end":899,"match_start":837,"name":"ANK_2a"},{"dbname":"SUPERFAMILY","id":"SSF48403","interpro_description":"Ankyrin repeat-containing domain superfamily","interpro_id":"IPR036770","interpro_name":"Ankyrin_rpt-contain_sf","locations":[{"end":916,"start":831}],"match_end":916,"match_start":831,"name":"Ankyrin repeat"},{"dbname":"SUPERFAMILY","id":"SSF81296","interpro_description":"Immunoglobulin E-set","interpro_id":"IPR014756","interpro_name":"Ig_E-set","locations":[{"end":740,"start":623}],"match_end":740,"match_start":623,"name":"E set domains"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.20","interpro_description":"Ankyrin repeat-containing domain superfamily","interpro_id":"IPR036770","interpro_name":"Ankyrin_rpt-contain_sf","locations":[{"end":933,"start":793}],"match_end":933,"match_start":793},{"dbname":"GENE3D","id":"G3DSA:2.60.40.10","interpro_description":"Immunoglobulin-like fold","interpro_id":"IPR013783","interpro_name":"Ig-like_fold","locations":[{"end":761,"start":625}],"match_end":761,"match_start":625,"name":"Immunoglobulins"},{"dbname":"PANTHER","id":"PTHR24123","interpro_description":"Multifunctional Ankyrin Repeat Domain-Containing Protein","interpro_id":"IPR051165","interpro_name":"Multifunctional_ANK_Repeat","locations":[{"end":926,"start":833}],"match_end":926,"match_start":833,"name":"ANKYRIN REPEAT-CONTAINING"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":49,"start":16},{"end":454,"start":434},{"end":1048,"start":1014},{"end":1090,"start":1065}],"match_end":1090,"match_start":16,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":454,"start":441},{"end":1048,"start":1030}],"match_end":1048,"match_start":441,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":37,"start":21}],"match_end":37,"match_start":21,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":214919,"start_pos":211478,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":45,"start":36}},{"range":{"end":175,"start":161}},{"range":{"end":207,"start":191}},{"range":{"end":527,"start":510}},{"range":{"end":643,"start":633}},{"range":{"end":789,"start":782}}],"name":"mga2","ortholog_annotations":[{"gene_uniquename":"SJAG_02196","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18806","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02196","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18807","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02196","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02196","ortholog_taxonid":4932,"ortholog_uniquename":"YIR033W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02196","ortholog_taxonid":4932,"ortholog_uniquename":"YIR033W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02196","ortholog_taxonid":4932,"ortholog_uniquename":"YKL020C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02196","ortholog_taxonid":4932,"ortholog_uniquename":"YKL020C","reference_uniquename":"PMID:26896847"}],"product":"membrane sensing transcription coactivator, ankyrin repeat containing Mga2","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003690"],"not-binding":["GO:0003713"]}},"subset_termids":["GO:0006629","MONDO:0000426","MONDO:0005559","MONDO:0002039","GO:0005783","GO:0006351","GO:0003712","GO:0006355","GO:0005634","GO:0005773","GO:0003713","GO:0060090","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0003690":null,"GO:0003713":null,"GO:0005634":null,"GO:0045834":null,"GO:0045944":null,"GO:0098554":null,"MONDO:0013886":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02196.1"],"transcripts_by_uniquename":{"SJAG_02196.1":null},"uniprot_identifier":"B6K1T4","uniquename":"SJAG_02196"}


id: SJAG_02197
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77737],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[95439],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77738],"is_not":false,"summary":null,"term":"GO:0034657"},{"annotations":[95441],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["InterPro:IPR011989","InterPro:IPR000225","EnsemblGenomes-Gn:SJAG_02197","UniProtKB/TrEMBL:B6K1T5","EnsemblGenomes-Tr:EEB07116","InterPro:IPR038739","InterPro:IPR016024"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bgl2","uniquename":"SJAG_02192"},{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"}],"genes_by_uniquename":{"HGNC:24999":null,"SJAG_02197":null,"SPAC26H5.04":null,"YIL017C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SMART","id":"SM00185","interpro_description":"Armadillo","interpro_id":"IPR000225","interpro_name":"Armadillo","locations":[{"end":83,"start":38},{"end":482,"start":400}],"match_end":482,"match_start":38,"name":"arm_5"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":148,"start":31},{"end":343,"start":192},{"end":737,"start":385}],"match_end":737,"match_start":31,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":141,"start":18},{"end":734,"start":193}],"match_end":734,"match_start":18},{"dbname":"PANTHER","id":"PTHR15651","interpro_description":"Armadillo-type fold containing protein ARMC8/Vid28","interpro_id":"IPR038739","interpro_name":"ARMC8/Vid28","locations":[{"end":735,"start":16}],"match_end":735,"match_start":16,"name":"ARMADILLO REPEAT-CONTAINING PROTEIN 8"}],"location":{"chromosome_name":"supercont5.1","end_pos":217748,"start_pos":215426,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":238,"start":222}}],"name":"gid5","ortholog_annotations":[{"gene_uniquename":"SJAG_02197","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24999","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02197","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02197","ortholog_taxonid":4932,"ortholog_uniquename":"YIL017C","reference_uniquename":"PMID:29761456"}],"product":"GID complex armadillo repeat subunit Gid5","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0034657":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02197.1"],"transcripts_by_uniquename":{"SJAG_02197.1":null},"uniprot_identifier":"B6K1T5","uniquename":"SJAG_02197"}


id: SJAG_02198
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95434],"is_not":false,"summary":null,"term":"GO:0140861"},{"annotations":[60893],"is_not":false,"summary":null,"term":"GO:0006335"},{"annotations":[95436],"is_not":false,"summary":null,"term":"GO:1990426"},{"annotations":[73444],"is_not":false,"summary":null,"term":"GO:0006334"}],"cellular_component":[{"annotations":[73443],"is_not":false,"summary":null,"term":"GO:0033186"},{"annotations":[95431],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95432],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[95438],"is_not":false,"summary":null,"term":"GO:0000510"}]},"dbxrefs":["GOA:B6K1T6","InterPro:IPR017986","EnsemblGenomes-Tr:EEB07117","InterPro:IPR015943","UniProtKB/TrEMBL:B6K1T6","InterPro:IPR036322","InterPro:IPR001680","EnsemblGenomes-Gn:SJAG_02198"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":252,"start":223}},{"range":{"end":472,"start":452}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02193"},{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"}],"genes_by_uniquename":{"HGNC:1911":null,"SJAG_02198":null,"SPAC26H5.03":null,"YML102W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CAF1B/HIR1 beta-propeller domain","id":"PF24105","interpro_description":"CAF1B/HIR1, beta-propeller domain","interpro_id":"IPR055410","interpro_name":"CAF1B_HIR1_beta-prop","locations":[{"end":412,"start":5}],"match_end":412,"match_start":5,"name":"Beta-prop_CAF1B_HIR1"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":94,"start":63}],"match_end":94,"match_start":63,"name":"WD_REPEATS_REGION"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":94,"start":63},{"end":165,"start":134}],"match_end":165,"match_start":63,"name":"WD_REPEATS_2"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":45,"start":1},{"end":95,"start":56},{"end":156,"start":117},{"end":198,"start":159},{"end":363,"start":306},{"end":408,"start":367}],"match_end":408,"match_start":1,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":216,"start":20},{"end":413,"start":248}],"match_end":413,"match_start":20,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":407,"start":3}],"match_end":407,"match_start":3},{"dbname":"PANTHER","id":"PTHR15271","interpro_description":"Chromatin assembly factor 1 subunit Cac2/CHAF1B/FAS2","interpro_id":"IPR045145","interpro_name":"PTHR15271","locations":[{"end":457,"start":1}],"match_end":457,"match_start":1,"name":"CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":252,"start":223},{"end":472,"start":452}],"match_end":472,"match_start":223,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":219753,"start_pos":218161,"strand":"reverse"},"name":"pcf2","ortholog_annotations":[{"gene_uniquename":"SJAG_02198","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1911","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02198","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02198","ortholog_taxonid":4932,"ortholog_uniquename":"YML102W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02198","ortholog_taxonid":4932,"ortholog_uniquename":"YML102W","reference_uniquename":"PMID:26896847"}],"product":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex WD repeat subunit, Pcf2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0000510"]}},"subset_termids":["GO:0140104","GO:0065003","GO:0005634","GO:0006260","GO:0006325","GO:0005829","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000510":null,"GO:0005829":null,"GO:0006334":null,"GO:0006335":null,"GO:0033186":null,"GO:0043596":null,"GO:0140861":null,"GO:1990426":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02198.1"],"transcripts_by_uniquename":{"SJAG_02198.1":null},"uniprot_identifier":"B6K1T6","uniquename":"SJAG_02198"}


id: SJAG_02199
data:
  {"coiled_coil_coords":[{"range":{"end":518,"start":498}}],"cv_annotations":{"biological_process":[{"annotations":[78941],"is_not":false,"summary":null,"term":"GO:0000731"},{"annotations":[95422],"is_not":false,"summary":null,"term":"GO:1903461"},{"annotations":[67919],"is_not":false,"summary":null,"term":"GO:0070914"}],"cellular_component":[{"annotations":[78939],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[67911],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[67913],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[67912],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[78938],"is_not":false,"summary":null,"term":"GO:0008047"},{"annotations":[78940],"is_not":false,"summary":null,"term":"GO:0017116"},{"annotations":[67917],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR032423","EnsemblGenomes-Gn:SJAG_02199","EnsemblGenomes-Tr:EEB07118","UniProtKB/TrEMBL:B6K1T7","InterPro:IPR003593","InterPro:IPR006642","GOA:B6K1T7","InterPro:IPR027417","InterPro:IPR003959","InterPro:IPR021886","InterPro:IPR008921"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":520,"start":493}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pot1","uniquename":"SJAG_02194"},{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"}],"genes_by_uniquename":{"HGNC:20876":null,"SJAG_02199":null,"SPAC26H5.02c":null,"YNL218W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"AAA C-terminal domain","id":"PF16193","interpro_description":"AAA C-terminal domain","interpro_id":"IPR032423","interpro_name":"AAA_assoc_2","locations":[{"end":335,"start":260}],"match_end":335,"match_start":260,"name":"AAA_assoc_2"},{"dbname":"PFAM","description":"MgsA AAA+ ATPase C terminal","id":"PF12002","interpro_description":"MgsA AAA+ ATPase C-terminal","interpro_id":"IPR021886","interpro_name":"MgsA_C","locations":[{"end":487,"start":336}],"match_end":487,"match_start":336,"name":"MgsA_C"},{"dbname":"PFAM","description":"ATPase family associated with various cellular activities (AAA)","id":"PF00004","interpro_description":"ATPase, AAA-type, core","interpro_id":"IPR003959","interpro_name":"ATPase_AAA_core","locations":[{"end":234,"start":126}],"match_end":234,"match_start":126,"name":"AAA"},{"dbname":"CDD","description":"AAA","id":"cd00009","locations":[{"end":232,"start":102}],"match_end":232,"match_start":102,"name":"AAA"},{"dbname":"CDD","description":"HLD_clamp_RarA","id":"cd18139","locations":[{"end":307,"start":239}],"match_end":307,"match_start":239,"name":"HLD_clamp_RarA"},{"dbname":"SMART","id":"SM00382","interpro_description":"AAA+ ATPase domain","interpro_id":"IPR003593","interpro_name":"AAA+_ATPase","locations":[{"end":239,"start":122}],"match_end":239,"match_start":122,"name":"AAA_5"},{"dbname":"SMART","id":"SM00734","interpro_description":"Rad18, zinc finger UBZ4-type","interpro_id":"IPR006642","interpro_name":"Rad18_UBZ4","locations":[{"end":29,"start":6}],"match_end":29,"match_start":6,"name":"c2hc_5"},{"dbname":"FUNFAM","description":"Replication-associated recombination protein A","id":"G3DSA:3.40.50.300:FF:000137","locations":[{"end":238,"start":79}],"match_end":238,"match_start":79},{"dbname":"FUNFAM","description":"Putative AAA family ATPase","id":"G3DSA:1.20.272.10:FF:000001","locations":[{"end":413,"start":310}],"match_end":413,"match_start":310},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":307,"start":81}],"match_end":307,"match_start":81,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF48019","interpro_description":"DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal","interpro_id":"IPR008921","interpro_name":"DNA_pol3_clamp-load_cplx_C","locations":[{"end":487,"start":320}],"match_end":487,"match_start":320,"name":"post-AAA+ oligomerization domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":238,"start":77}],"match_end":238,"match_start":77},{"dbname":"GENE3D","id":"G3DSA:1.20.272.10","locations":[{"end":413,"start":310}],"match_end":413,"match_start":310},{"dbname":"GENE3D","id":"G3DSA:1.10.3710.10","locations":[{"end":517,"start":415}],"match_end":517,"match_start":415},{"dbname":"GENE3D","id":"G3DSA:1.10.8.60","locations":[{"end":304,"start":239}],"match_end":304,"match_start":239},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":30,"start":3}],"match_end":30,"match_start":3,"name":"Classic Zinc Finger"},{"dbname":"PANTHER","id":"PTHR13779","interpro_description":"AAA ATPase RarA/MGS1/WRNIP1","interpro_id":"IPR051314","interpro_name":"AAA_ATPase_RarA/MGS1/WRNIP1","locations":[{"end":487,"start":8}],"match_end":487,"match_start":8,"name":"WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER"},{"dbname":"COILS","id":"Coil","locations":[{"end":518,"start":498}],"match_end":518,"match_start":498,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":520,"start":493}],"match_end":520,"match_start":493,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":504,"start":494}],"match_end":504,"match_start":494,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":520,"start":509}],"match_end":520,"match_start":509,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":223395,"start_pos":221670,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":410,"start":400}}],"name":"mgs1","ortholog_annotations":[{"gene_uniquename":"SJAG_02199","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20876","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02199","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26H5.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02199","ortholog_taxonid":4932,"ortholog_uniquename":"YNL218W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02199","ortholog_taxonid":4932,"ortholog_uniquename":"YNL218W","reference_uniquename":"PMID:26896847"}],"product":"DNA replication ATPase Mgs1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677","GO:0005524","GO:0008270"],"not-binding":["GO:0008047","GO:0017116","GO:0016887"]}},"subset_termids":["GO:0016887","GO:0030234","GO:0006281","GO:0005634","GO:0016853","GO:0140097","GO:0006260","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000731":null,"GO:0003677":null,"GO:0005524":null,"GO:0005634":null,"GO:0008047":null,"GO:0008270":null,"GO:0016887":null,"GO:0017116":null,"GO:0070914":null,"GO:1903461":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02199.1"],"transcripts_by_uniquename":{"SJAG_02199.1":null},"uniprot_identifier":"B6K1T7","uniquename":"SJAG_02199"}


id: SJAG_02200
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94023],"is_not":false,"summary":null,"term":"GO:1901255"},{"annotations":[94024],"is_not":false,"summary":null,"term":"GO:0070914"}],"cellular_component":[{"annotations":[75124],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[94021],"is_not":false,"summary":null,"term":"GO:0035861"}],"molecular_function":[{"annotations":[75123],"is_not":false,"summary":null,"term":"GO:0043138"},{"annotations":[63022],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[94027],"is_not":false,"summary":null,"term":"GO:0000405"}],"mondo":[{"annotations":[85903],"is_not":false,"summary":null,"term":"MONDO:0009039"},{"annotations":[85926],"is_not":false,"summary":null,"term":"MONDO:0009955"},{"annotations":[85428],"is_not":false,"summary":null,"term":"MONDO:0016369"}]},"dbxrefs":["InterPro:IPR018973","InterPro:IPR014001","GOA:B6K1T8","InterPro:IPR001650","EnsemblGenomes-Tr:EEB07119","EnsemblGenomes-Gn:SJAG_02200","InterPro:IPR027417","InterPro:IPR011545","UniProtKB/TrEMBL:B6K1T8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":29,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02195"},{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"}],"genes_by_uniquename":{"HGNC:9949":null,"SJAG_02200":null,"SPAC23A1.19c":null,"YDR291W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP-dependent helicase HRQ1, winged helix domain","id":"PF22982","interpro_description":"ATP-dependent helicase HRQ1, winged helix domain","interpro_id":"IPR055227","interpro_name":"HRQ1_WHD","locations":[{"end":749,"start":680}],"match_end":749,"match_start":680,"name":"WHD_HRQ1"},{"dbname":"PFAM","description":"MrfA Zn-binding domain","id":"PF09369","interpro_description":"MrfA-like Zn-binding domain","interpro_id":"IPR018973","interpro_name":"MZB","locations":[{"end":999,"start":908}],"match_end":999,"match_start":908,"name":"MZB"},{"dbname":"PFAM","description":"DEAD/DEAH box helicase","id":"PF00270","interpro_description":"DEAD/DEAH box helicase domain","interpro_id":"IPR011545","interpro_name":"DEAD/DEAH_box_helicase_dom","locations":[{"end":477,"start":304}],"match_end":477,"match_start":304,"name":"DEAD"},{"dbname":"PFAM","description":"Helicase conserved C-terminal domain","id":"PF00271","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":644,"start":537}],"match_end":644,"match_start":537,"name":"Helicase_C"},{"dbname":"CDD","description":"DEXHc_Hrq1-like","id":"cd17923","locations":[{"end":485,"start":303}],"match_end":485,"match_start":303,"name":"DEXHc_Hrq1-like"},{"dbname":"CDD","description":"SF2_C_Hrq","id":"cd18797","locations":[{"end":654,"start":507}],"match_end":654,"match_start":507,"name":"SF2_C_Hrq"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.","id":"PS51192","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":493,"start":310}],"match_end":493,"match_start":310,"name":"HELICASE_ATP_BIND_1"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase C-terminal domain profile.","id":"PS51194","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":687,"start":529}],"match_end":687,"match_start":529,"name":"HELICASE_CTER"},{"dbname":"SMART","id":"SM00490","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":645,"start":567}],"match_end":645,"match_start":567,"name":"helicmild6"},{"dbname":"SMART","id":"SM00487","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":507,"start":298}],"match_end":507,"match_start":298,"name":"ultradead3"},{"dbname":"FUNFAM","description":"DEAD/DEAH box helicase","id":"G3DSA:3.40.50.300:FF:001137","locations":[{"end":672,"start":522}],"match_end":672,"match_start":522},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":478,"start":312},{"end":648,"start":508}],"match_end":648,"match_start":312,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":499,"start":268},{"end":680,"start":521}],"match_end":680,"match_start":268},{"dbname":"PANTHER","id":"PTHR47957","locations":[{"end":1030,"start":14}],"match_end":1030,"match_start":14,"name":"ATP-DEPENDENT HELICASE HRQ1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":29,"start":1}],"match_end":29,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":227119,"start_pos":223952,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":460,"start":450}},{"range":{"end":739,"start":728}},{"range":{"end":803,"start":792}}],"name":"hrq1","ortholog_annotations":[{"gene_uniquename":"SJAG_02200","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9949","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02200","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.19c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02200","ortholog_taxonid":4932,"ortholog_uniquename":"YDR291W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02200","ortholog_taxonid":4932,"ortholog_uniquename":"YDR291W","reference_uniquename":"PMID:26896847"}],"product":"RecQ type DNA helicase Hrq1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0000405"],"not-binding":["GO:0043138"]}},"subset_termids":["MONDO:0005328","GO:0016853","MONDO:0005497","MONDO:0005093","GO:0005694","MONDO:0006025","GO:0140097","GO:0006281","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000405":null,"GO:0005524":null,"GO:0005634":null,"GO:0035861":null,"GO:0043138":null,"GO:0070914":null,"GO:1901255":null,"MONDO:0009039":null,"MONDO:0009955":null,"MONDO:0016369":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02200.1"],"transcripts_by_uniquename":{"SJAG_02200.1":null},"uniprot_identifier":"B6K1T8","uniquename":"SJAG_02200"}


id: SJAG_02201
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74495],"is_not":false,"summary":null,"term":"GO:0070124"}],"cellular_component":[{"annotations":[74494],"is_not":false,"summary":null,"term":"GO:0005763"}],"molecular_function":[{"annotations":[74493],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[85731],"is_not":false,"summary":null,"term":"MONDO:0033537"}]},"dbxrefs":["InterPro:IPR016712","UniProtKB/TrEMBL:B6K1T9","EnsemblGenomes-Tr:EEB07120","EnsemblGenomes-Gn:SJAG_02201","GOA:B6K1T9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":250,"start":225}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mga2","uniquename":"SJAG_02196"},{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"}],"genes_by_uniquename":{"HGNC:14513":null,"SJAG_02201":null,"SPAC23A1.18c":null,"YPL118W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial ribosomal protein subunit","id":"PF11709","interpro_description":"Small ribosomal subunit protein bS1m-like","interpro_id":"IPR016712","interpro_name":"Rbsml_bS1m-like","locations":[{"end":89,"start":4}],"match_end":89,"match_start":4,"name":"Mit_ribos_Mrp51"},{"dbname":"PANTHER","id":"PTHR28058","interpro_description":"Small ribosomal subunit protein bS1m-like","interpro_id":"IPR016712","interpro_name":"Rbsml_bS1m-like","locations":[{"end":290,"start":171}],"match_end":290,"match_start":171,"name":"37S RIBOSOMAL PROTEIN MRP51, MITOCHONDRIAL"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":250,"start":225}],"match_end":250,"match_start":225,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":228303,"start_pos":227428,"strand":"forward"},"name":"mrp51","ortholog_annotations":[{"gene_uniquename":"SJAG_02201","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14513","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02201","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.18c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02201","ortholog_taxonid":4932,"ortholog_uniquename":"YPL118W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L51-bS1m","references_by_uniquename":{"GO_REF:0000033":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["MONDO:0004069","GO:0140053","GO:0005198","MONDO:0005066","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005763":null,"GO:0070124":null,"MONDO:0033537":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02201.1"],"transcripts_by_uniquename":{"SJAG_02201.1":null},"uniprot_identifier":"B6K1T9","uniquename":"SJAG_02201"}


id: SJAG_02202
data:
  {"coiled_coil_coords":[{"range":{"end":338,"start":275}},{"range":{"end":457,"start":437}}],"cv_annotations":{"biological_process":[{"annotations":[94014],"is_not":false,"summary":null,"term":"GO:0030036"}],"cellular_component":[{"annotations":[94010],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[94011],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[94012],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[94013],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02202","InterPro:IPR035552","InterPro:IPR001452","InterPro:IPR036028","UniProtKB/TrEMBL:B6K1U0","EnsemblGenomes-Tr:EEB07121"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":123,"start":78}},{"range":{"end":249,"start":224}},{"range":{"end":627,"start":342}},{"range":{"end":745,"start":639}},{"range":{"end":798,"start":778}},{"range":{"end":1152,"start":852}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gid5","uniquename":"SJAG_02197"},{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"}],"genes_by_uniquename":{"SJAG_02202":null,"SPAC23A1.17":null,"YJL020C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SH3 domain","id":"PF00018","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":57,"start":9}],"match_end":57,"match_start":9,"name":"SH3_1"},{"dbname":"CDD","description":"SH3_Bbc1","id":"cd11887","interpro_description":"Mti1, SH3 domain","interpro_id":"IPR035552","interpro_name":"Mti1_SH3","locations":[{"end":63,"start":5}],"match_end":63,"match_start":5,"name":"SH3_Bbc1"},{"dbname":"PROSITE_PROFILES","description":"Src homology 3 (SH3) domain profile.","id":"PS50002","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":66,"start":3}],"match_end":66,"match_start":3,"name":"SH3"},{"dbname":"SMART","id":"SM00326","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":65,"start":6}],"match_end":65,"match_start":6,"name":"SH3_2"},{"dbname":"SUPERFAMILY","id":"SSF50044","interpro_description":"SH3-like domain superfamily","interpro_id":"IPR036028","interpro_name":"SH3-like_dom_sf","locations":[{"end":67,"start":6}],"match_end":67,"match_start":6,"name":"SH3-domain"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.40","locations":[{"end":72,"start":2}],"match_end":72,"match_start":2,"name":"SH3 Domains"},{"dbname":"PANTHER","id":"PTHR46026","locations":[{"end":98,"start":1}],"match_end":98,"match_start":1,"name":"RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F"},{"dbname":"COILS","id":"Coil","locations":[{"end":338,"start":275},{"end":457,"start":437}],"match_end":457,"match_start":275,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":123,"start":78},{"end":249,"start":224},{"end":627,"start":342},{"end":745,"start":639},{"end":798,"start":778},{"end":1152,"start":852}],"match_end":1152,"match_start":78,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":372,"start":356},{"end":559,"start":547}],"match_end":559,"match_start":356,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":461,"start":444},{"end":958,"start":939}],"match_end":958,"match_start":444,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":624,"start":613},{"end":650,"start":639},{"end":1054,"start":1044}],"match_end":1054,"match_start":613,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":96,"start":78},{"end":123,"start":111},{"end":473,"start":462},{"end":607,"start":586},{"end":680,"start":669},{"end":1014,"start":1005}],"match_end":1014,"match_start":78,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":505,"start":495},{"end":697,"start":687}],"match_end":697,"match_start":495,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":242,"start":233},{"end":529,"start":518},{"end":910,"start":901},{"end":1067,"start":1058},{"end":1101,"start":1090},{"end":1127,"start":1118}],"match_end":1127,"match_start":233,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":233194,"start_pos":228962,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":122,"start":113}},{"range":{"end":138,"start":124}},{"range":{"end":244,"start":234}},{"range":{"end":371,"start":355}},{"range":{"end":432,"start":421}},{"range":{"end":470,"start":440}},{"range":{"end":504,"start":492}},{"range":{"end":527,"start":517}},{"range":{"end":564,"start":546}},{"range":{"end":799,"start":785}},{"range":{"end":910,"start":885}},{"range":{"end":989,"start":977}},{"range":{"end":1065,"start":1056}},{"range":{"end":1105,"start":1080}},{"range":{"end":1128,"start":1115}},{"range":{"end":1144,"start":1133}},{"range":{"end":1248,"start":1236}}],"name":"bbc1","ortholog_annotations":[{"gene_uniquename":"SJAG_02202","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.17","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02202","ortholog_taxonid":4932,"ortholog_uniquename":"YJL020C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02202","ortholog_taxonid":4932,"ortholog_uniquename":"YJL020C","reference_uniquename":"PMID:26896847"}],"product":"WIP family cytoskeletal protein Bbc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0015629","GO:0030036","GO:0030479","GO:0005938","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0030036":null,"GO:0030479":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02202.1"],"transcripts_by_uniquename":{"SJAG_02202.1":null},"uniprot_identifier":"B6K1U0","uniquename":"SJAG_02202"}


id: SJAG_02203
data:
  {"coiled_coil_coords":[{"range":{"end":161,"start":141}}],"cv_annotations":{"biological_process":[{"annotations":[67682],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[94006],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[94004],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[67680],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[67675],"is_not":false,"summary":null,"term":"GO:0043175"},{"annotations":[67676],"is_not":false,"summary":null,"term":"GO:0008420"},{"annotations":[67677],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1U1","EnsemblGenomes-Gn:SJAG_02203","InterPro:IPR007308","GOA:B6K1U1","InterPro:IPR038534","EnsemblGenomes-Tr:EEB07122","InterPro:IPR039693"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":24,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pcf2","uniquename":"SJAG_02198"},{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"}],"genes_by_uniquename":{"HGNC:25791":null,"SJAG_02203":null,"SPAC23A1.16c":null,"YER139C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Rtr1/RPAP2 family","id":"PF04181","interpro_description":"Rtr1/RPAP2 domain","interpro_id":"IPR007308","interpro_name":"Rtr1/RPAP2_dom","locations":[{"end":135,"start":67}],"match_end":135,"match_start":67,"name":"RPAP2_Rtr1"},{"dbname":"PROSITE_PROFILES","description":"RTR1-type zinc finger.","id":"PS51479","interpro_description":"Rtr1/RPAP2 domain","interpro_id":"IPR007308","interpro_name":"Rtr1/RPAP2_dom","locations":[{"end":143,"start":64}],"match_end":143,"match_start":64,"name":"ZF_RTR1"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.820","interpro_description":"Rtr1/RPAP2 domain superfamily","interpro_id":"IPR038534","interpro_name":"Rtr1/RPAP2_sf","locations":[{"end":182,"start":11}],"match_end":182,"match_start":11},{"dbname":"PANTHER","id":"PTHR14732","interpro_description":"Rtr1/RPAP2","interpro_id":"IPR039693","interpro_name":"Rtr1/RPAP2","locations":[{"end":163,"start":10}],"match_end":163,"match_start":10,"name":"RNA POLYMERASE II SUBUNIT B1 CTD PHOSPHATASE RPAP2-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":161,"start":141}],"match_end":161,"match_start":141,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":24,"start":1}],"match_end":24,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":234327,"start_pos":233719,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":30,"start":8}}],"name":"rtr1","ortholog_annotations":[{"gene_uniquename":"SJAG_02203","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02203","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02203","ortholog_taxonid":4932,"ortholog_uniquename":"YER139C","reference_uniquename":"PMID:29761456"}],"product":"RNA polymerase II CTD phosphatase Rtr1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043175","GO:0008270"],"not-binding":["GO:0008420"]}},"subset_termids":["GO:0005829","GO:0140096","GO:0006351","GO:0016788","GO:0004721","GO:0005634","GO:0023052","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006357":null,"GO:0008270":null,"GO:0008420":null,"GO:0023052":null,"GO:0043175":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02203.1"],"transcripts_by_uniquename":{"SJAG_02203.1":null},"uniprot_identifier":"B6K1U1","uniquename":"SJAG_02203"}


id: SJAG_02204
data:
  {"coiled_coil_coords":[{"range":{"end":72,"start":52}}],"cv_annotations":{"biological_process":[{"annotations":[94001],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[69333],"is_not":false,"summary":null,"term":"GO:0061025"},{"annotations":[69332],"is_not":false,"summary":null,"term":"GO:0006890"}],"cellular_component":[{"annotations":[93998],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[93999],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[94000],"is_not":false,"summary":null,"term":"GO:0031201"}],"molecular_function":[{"annotations":[69331],"is_not":false,"summary":null,"term":"GO:0005484"}]},"dbxrefs":["GOA:B6K1U2","EnsemblGenomes-Gn:SJAG_02204","UniProtKB/TrEMBL:B6K1U2","EnsemblGenomes-Tr:EEB07123","InterPro:IPR005606"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mgs1","uniquename":"SJAG_02199"},{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"}],"genes_by_uniquename":{"HGNC:1082":null,"SJAG_02204":null,"SPAC23A1.15c":null,"YDR498C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sec20","id":"PF03908","interpro_description":"Sec20, C-terminal","interpro_id":"IPR056173","interpro_name":"Sec20_C","locations":[{"end":215,"start":124}],"match_end":215,"match_start":124,"name":"Sec20"},{"dbname":"PANTHER","id":"PTHR12825","interpro_description":"Sec20","interpro_id":"IPR005606","interpro_name":"Sec20","locations":[{"end":220,"start":44}],"match_end":220,"match_start":44,"name":"BNIP1-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":72,"start":52}],"match_end":72,"match_start":52,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":235207,"start_pos":234524,"strand":"forward"},"name":"sec20","ortholog_annotations":[{"gene_uniquename":"SJAG_02204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1082","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02204","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02204","ortholog_taxonid":4932,"ortholog_uniquename":"YDR498C","reference_uniquename":"PMID:29761456"}],"product":"SNARE Sec20","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005484"]}},"subset_termids":["GO:0005794","GO:0005789","GO:0005783","GO:0061024","GO:0060090","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005484":null,"GO:0005789":null,"GO:0005794":null,"GO:0006886":null,"GO:0006890":null,"GO:0031201":null,"GO:0061025":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":212,"start":193}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02204.1"],"transcripts_by_uniquename":{"SJAG_02204.1":null},"uniprot_identifier":"B6K1U2","uniquename":"SJAG_02204"}


id: SJAG_02205
data:
  {"cv_annotations":{"PSI-MOD":[{"annotations":[80988],"is_not":false,"summary":null,"term":"MOD:00128"}],"cellular_component":[{"annotations":[70844],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[70846],"is_not":false,"summary":null,"term":"GO:0016846"},{"annotations":[70845],"is_not":false,"summary":null,"term":"GO:0030170"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1U3","InterPro:IPR000277","EnsemblGenomes-Gn:SJAG_02205","InterPro:IPR015422","InterPro:IPR015421","InterPro:IPR015424","GOA:B6K1U3","EnsemblGenomes-Tr:EEB07124"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hrq1","uniquename":"SJAG_02200"},{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"}],"genes_by_uniquename":{"SJAG_02205":null,"SPAC23A1.14c":null,"YHR112C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cys/Met metabolism PLP-dependent enzyme","id":"PF01053","interpro_description":"Cys/Met metabolism, pyridoxal phosphate-dependent enzyme","interpro_id":"IPR000277","interpro_name":"Cys/Met-Metab_PyrdxlP-dep_enz","locations":[{"end":386,"start":12}],"match_end":386,"match_start":12,"name":"Cys_Met_Meta_PP"},{"dbname":"PROSITE_PATTERNS","description":"Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.","id":"PS00868","interpro_description":"Cys/Met metabolism enzyme, pyridoxal-phosphate attachment site","interpro_id":"IPR054542","interpro_name":"Cys_met_metab_PP","locations":[{"end":210,"start":196}],"match_end":210,"match_start":196,"name":"CYS_MET_METAB_PP"},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":388,"start":52}],"match_end":388,"match_start":52,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":254,"start":10}],"match_end":254,"match_start":10},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.10","interpro_description":"Pyridoxal phosphate-dependent transferase, small domain","interpro_id":"IPR015422","interpro_name":"PyrdxlP-dep_Trfase_small","locations":[{"end":397,"start":255}],"match_end":397,"match_start":255,"name":"Aspartate Aminotransferase, domain 1"},{"dbname":"PANTHER","id":"PTHR11808","interpro_description":"Cys/Met metabolism, pyridoxal phosphate-dependent enzyme","interpro_id":"IPR000277","interpro_name":"Cys/Met-Metab_PyrdxlP-dep_enz","locations":[{"end":389,"start":12}],"match_end":389,"match_start":12,"name":"TRANS-SULFURATION ENZYME FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF001434","interpro_description":"Cys/Met metabolism, pyridoxal phosphate-dependent enzyme","interpro_id":"IPR000277","interpro_name":"Cys/Met-Metab_PyrdxlP-dep_enz","locations":[{"end":390,"start":2}],"match_end":390,"match_start":2,"name":"CGS"}],"location":{"chromosome_name":"supercont5.1","end_pos":236945,"start_pos":235728,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":81,"start":68}},{"range":{"end":256,"start":242}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_02205","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02205","ortholog_taxonid":4932,"ortholog_uniquename":"YHR112C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02205","ortholog_taxonid":4932,"ortholog_uniquename":"YHR112C","reference_uniquename":"PMID:26896847"}],"product":"pyridoxal phosphate-dependent transferase, possible cystathionine beta-lyase implicated in sulfur metabolism","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030170"],"not-binding":["GO:0016846"]}},"subset_termids":["GO:0016829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0016846":null,"GO:0030170":null,"MOD:00128":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":98,"start":76}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02205.1"],"transcripts_by_uniquename":{"SJAG_02205.1":null},"uniprot_identifier":"B6K1U3","uniquename":"SJAG_02205"}


id: SJAG_02206
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93989],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[93986],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93987],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[77935],"is_not":false,"summary":null,"term":"GO:0009328"}],"molecular_function":[{"annotations":[66580],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[66577],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[77934],"is_not":false,"summary":null,"term":"GO:0004826"},{"annotations":[66581],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[87409],"is_not":false,"summary":null,"term":"MONDO:0100215"}]},"dbxrefs":["GOA:B6K1U5","EnsemblGenomes-Gn:SJAG_02206","EnsemblGenomes-Tr:EEB07126","InterPro:IPR004531","InterPro:IPR040659","InterPro:IPR005146","InterPro:IPR009061","InterPro:IPR020825","UniProtKB/TrEMBL:B6K1U5","InterPro:IPR005147","InterPro:IPR041616"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"}],"genes_by_uniquename":{"HGNC:17800":null,"SJAG_02206":null,"SPAC23A1.12c":null,"YLR060W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA synthetase B5 domain","id":"PF03484","interpro_description":"tRNA synthetase, B5-domain","interpro_id":"IPR005147","interpro_name":"tRNA_synthase_B5-dom","locations":[{"end":363,"start":296}],"match_end":363,"match_start":296,"name":"B5"},{"dbname":"PFAM","description":"Phenylalanyl tRNA synthetase beta chain CLM domain","id":"PF17759","interpro_description":"Phenylalanyl tRNA synthetase beta chain, core domain","interpro_id":"IPR041616","interpro_name":"PheRS_beta_core","locations":[{"end":585,"start":367}],"match_end":585,"match_start":367,"name":"tRNA_synthFbeta"},{"dbname":"PFAM","description":"Phe-tRNA synthetase beta subunit B1 domain","id":"PF18262","interpro_description":"Phenylalanine--tRNA ligase beta subunit, B1 domain","interpro_id":"IPR040659","interpro_name":"PhetRS_B1","locations":[{"end":79,"start":1}],"match_end":79,"match_start":1,"name":"PhetRS_B1"},{"dbname":"PFAM","description":"B3/4 domain","id":"PF03483","interpro_description":"B3/B4 tRNA-binding domain","interpro_id":"IPR005146","interpro_name":"B3/B4_tRNA-bd","locations":[{"end":248,"start":121}],"match_end":248,"match_start":121,"name":"B3_4"},{"dbname":"CDD","description":"PheRS_beta_core","id":"cd00769","interpro_description":"Phenylalanyl tRNA synthetase beta chain, core domain","interpro_id":"IPR041616","interpro_name":"PheRS_beta_core","locations":[{"end":585,"start":382}],"match_end":585,"match_start":382,"name":"PheRS_beta_core"},{"dbname":"PROSITE_PROFILES","description":"B5 domain profile.","id":"PS51483","interpro_description":"tRNA synthetase, B5-domain","interpro_id":"IPR005147","interpro_name":"tRNA_synthase_B5-dom","locations":[{"end":368,"start":290}],"match_end":368,"match_start":290,"name":"B5"},{"dbname":"SMART","id":"SM00874","interpro_description":"tRNA synthetase, B5-domain","interpro_id":"IPR005147","interpro_name":"tRNA_synthase_B5-dom","locations":[{"end":363,"start":292}],"match_end":363,"match_start":292,"name":"B5_2"},{"dbname":"SMART","id":"SM00873","interpro_description":"B3/B4 tRNA-binding domain","interpro_id":"IPR005146","interpro_name":"B3/B4_tRNA-bd","locations":[{"end":266,"start":104}],"match_end":266,"match_start":104,"name":"B3_4_2"},{"dbname":"FUNFAM","description":"phenylalanine--tRNA ligase beta subunit","id":"G3DSA:3.30.930.10:FF:000059","locations":[{"end":589,"start":381}],"match_end":589,"match_start":381},{"dbname":"FUNFAM","description":"Phenylalanyl-tRNA synthetase, beta subunit","id":"G3DSA:3.30.56.10:FF:000004","locations":[{"end":366,"start":294}],"match_end":366,"match_start":294},{"dbname":"FUNFAM","description":"Phenylalanyl-tRNA synthetase subunit beta","id":"G3DSA:3.30.56.10:FF:000006","locations":[{"end":78,"start":1}],"match_end":78,"match_start":1},{"dbname":"FUNFAM","description":"phenylalanine--tRNA ligase beta subunit","id":"G3DSA:3.50.40.10:FF:000002","locations":[{"end":291,"start":88}],"match_end":291,"match_start":88},{"dbname":"SUPERFAMILY","id":"SSF46955","interpro_description":"Putative DNA-binding domain superfamily","interpro_id":"IPR009061","interpro_name":"DNA-bd_dom_put_sf","locations":[{"end":74,"start":7},{"end":367,"start":294}],"match_end":367,"match_start":7,"name":"Putative DNA-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF56037","locations":[{"end":263,"start":98}],"match_end":263,"match_start":98,"name":"PheT/TilS domain"},{"dbname":"SUPERFAMILY","id":"SSF55681","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":585,"start":360}],"match_end":585,"match_start":360,"name":"Class II aaRS and biotin synthetases"},{"dbname":"GENE3D","id":"G3DSA:3.50.40.10","interpro_description":"Phenylalanyl-tRNA synthetase-like, B3/B4","interpro_id":"IPR020825","interpro_name":"Phe-tRNA_synthase-like_B3/B4","locations":[{"end":291,"start":88}],"match_end":291,"match_start":88},{"dbname":"GENE3D","id":"G3DSA:3.30.930.10","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":587,"start":381}],"match_end":587,"match_start":381,"name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"GENE3D","id":"G3DSA:3.30.56.10","locations":[{"end":79,"start":1},{"end":366,"start":295}],"match_end":366,"match_start":1},{"dbname":"PANTHER","id":"PTHR10947","interpro_description":"Phenylalanine-tRNA ligase, class IIc, beta subunit","interpro_id":"IPR045060","interpro_name":"Phe-tRNA-ligase_IIc_bsu","locations":[{"end":586,"start":1}],"match_end":586,"match_start":1,"name":"PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47"},{"dbname":"NCBIFAM","description":"phenylalanine--tRNA ligase subunit beta","id":"TIGR00471","interpro_description":"Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archaeal/eukaryotic type","interpro_id":"IPR004531","interpro_name":"Phe-tRNA-synth_IIc_bsu_arc_euk","locations":[{"end":585,"start":1}],"match_end":585,"match_start":1,"name":"pheT_arch"}],"location":{"chromosome_name":"supercont5.1","end_pos":239960,"start_pos":238142,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":103,"start":86}}],"name":"frs1","ortholog_annotations":[{"gene_uniquename":"SJAG_02206","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17800","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02206","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02206","ortholog_taxonid":4932,"ortholog_uniquename":"YLR060W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02206","ortholog_taxonid":4932,"ortholog_uniquename":"YLR060W","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic phenylalanine-tRNA ligase beta subunit Frs1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287","GO:0003723","GO:0005524"],"not-binding":["GO:0004826"]}},"subset_termids":["GO:0002181","MONDO:0006025","GO:0140101","GO:0005634","GO:0005829","GO:0140098","GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0002181":null,"GO:0003723":null,"GO:0004826":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0009328":null,"MONDO:0100215":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02206.1"],"transcripts_by_uniquename":{"SJAG_02206.1":null},"uniprot_identifier":"B6K1U5","uniquename":"SJAG_02206"}


id: SJAG_02207
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112779],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[76155],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[108703],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[112777],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[76153],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[76154],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02207","UniProtKB/TrEMBL:B6K1U6","InterPro:IPR036899","EnsemblGenomes-Tr:EEB07127","InterPro:IPR005822","InterPro:IPR005755","GOA:B6K1U6","InterPro:IPR023563"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"}],"genes_by_uniquename":{"HGNC:10304":null,"SJAG_02207":null,"SPAC23A1.11":null,"SPBC2G2.05":null,"SPBC839.13c":null,"YIL133C":null,"YNL069C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L13","id":"PF00572","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":111,"start":6}],"match_end":111,"match_start":6,"name":"Ribosomal_L13"},{"dbname":"CDD","description":"Ribosomal_L13","id":"cd00392","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":109,"start":8}],"match_end":109,"match_start":8,"name":"Ribosomal_L13"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L13 signature.","id":"PS00783","interpro_description":"Large ribosomal subunit protein uL13, conserved site","interpro_id":"IPR023563","interpro_name":"Ribosomal_uL13_CS","locations":[{"end":108,"start":85}],"match_end":108,"match_start":85,"name":"RIBOSOMAL_L13"},{"dbname":"FUNFAM","description":"60S ribosomal protein L16","id":"G3DSA:3.90.1180.10:FF:000002","locations":[{"end":150,"start":2}],"match_end":150,"match_start":2},{"dbname":"FUNFAM","description":"60S ribosomal protein L13a","id":"G3DSA:6.10.250.3250:FF:000001","locations":[{"end":197,"start":151}],"match_end":197,"match_start":151},{"dbname":"SUPERFAMILY","id":"SSF52161","interpro_description":"Large ribosomal subunit protein uL13 superfamily","interpro_id":"IPR036899","interpro_name":"Ribosomal_uL13_sf","locations":[{"end":150,"start":8}],"match_end":150,"match_start":8,"name":"Ribosomal protein L13"},{"dbname":"GENE3D","id":"G3DSA:6.10.250.3250","locations":[{"end":197,"start":151}],"match_end":197,"match_start":151},{"dbname":"GENE3D","id":"G3DSA:3.90.1180.10","interpro_description":"Large ribosomal subunit protein uL13 superfamily","interpro_id":"IPR036899","interpro_name":"Ribosomal_uL13_sf","locations":[{"end":150,"start":1}],"match_end":150,"match_start":1,"name":"Ribosomal protein L13"},{"dbname":"PANTHER","id":"PTHR11545","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":177,"start":5}],"match_end":177,"match_start":5,"name":"RIBOSOMAL PROTEIN L13"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL13 [rplM].","id":"MF_01366","interpro_description":"Large ribosomal subunit protein uL13","interpro_id":"IPR005822","interpro_name":"Ribosomal_uL13","locations":[{"end":131,"start":7}],"match_end":131,"match_start":7,"name":"Ribosomal_L13"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L13","id":"TIGR01077","interpro_description":"Large ribosomal subunit protein uL13, eukaryotic/archaeal","interpro_id":"IPR005755","interpro_name":"Ribosomal_uL13_euk/arc","locations":[{"end":150,"start":8}],"match_end":150,"match_start":8,"name":"L13_A_E"}],"location":{"chromosome_name":"supercont5.1","end_pos":240965,"start_pos":240310,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":129,"start":117}},{"range":{"end":186,"start":174}}],"name":"rpl16b","ortholog_annotations":[{"gene_uniquename":"SJAG_02207","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10304","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10304","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10304","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC2G2.05","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC839.13c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4932,"ortholog_uniquename":"YIL133C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4932,"ortholog_uniquename":"YIL133C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4932,"ortholog_uniquename":"YIL133C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4932,"ortholog_uniquename":"YNL069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4932,"ortholog_uniquename":"YNL069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02207","ortholog_taxonid":4932,"ortholog_uniquename":"YNL069C","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L13/L16","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0005634","GO:0005829","GO:0022626","GO:0002181","GO:0005730","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003729":null,"GO:0003735":null,"GO:0005730":null,"GO:0022625":null,"GO:0030684":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02207.1"],"transcripts_by_uniquename":{"SJAG_02207.1":null},"uniprot_identifier":"B6K1U6","uniquename":"SJAG_02207"}


id: SJAG_02208
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106545],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[73556],"is_not":false,"summary":null,"term":"GO:0006616"}],"cellular_component":[{"annotations":[106544],"is_not":false,"summary":null,"term":"GO:0005784"}],"molecular_function":[{"annotations":[73555],"is_not":false,"summary":null,"term":"GO:0008320"},{"annotations":[73554],"is_not":false,"summary":null,"term":"GO:0005048"}],"mondo":[{"annotations":[86486],"is_not":false,"summary":null,"term":"MONDO:0014891"},{"annotations":[86459],"is_not":false,"summary":null,"term":"MONDO:0958013"},{"annotations":[86456],"is_not":false,"summary":null,"term":"MONDO:0958017"}]},"dbxrefs":["GOA:B6K1U7","InterPro:IPR023201","UniProtKB/TrEMBL:B6K1U7","EnsemblGenomes-Gn:SJAG_02208","InterPro:IPR002208","EnsemblGenomes-Tr:EEB07128","InterPro:IPR019561"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"}],"genes_by_uniquename":{"HGNC:17702":null,"HGNC:18276":null,"SJAG_02208":null,"SPBC19G7.17":null,"YBR283C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SecY","id":"PF00344","interpro_description":"SecY/SEC61-alpha family","interpro_id":"IPR002208","interpro_name":"SecY/SEC61-alpha","locations":[{"end":448,"start":81}],"match_end":448,"match_start":81,"name":"SecY"},{"dbname":"PFAM","description":"Plug domain of Sec61p","id":"PF10559","interpro_description":"Translocon Sec61/SecY, plug domain","interpro_id":"IPR019561","interpro_name":"Translocon_Sec61/SecY_plug_dom","locations":[{"end":74,"start":42}],"match_end":74,"match_start":42,"name":"Plug_translocon"},{"dbname":"SUPERFAMILY","id":"SSF103491","interpro_description":"SecY domain superfamily","interpro_id":"IPR023201","interpro_name":"SecY_dom_sf","locations":[{"end":467,"start":12}],"match_end":467,"match_start":12,"name":"Preprotein translocase SecY subunit"},{"dbname":"GENE3D","id":"G3DSA:1.10.3370.10","interpro_description":"SecY domain superfamily","interpro_id":"IPR023201","interpro_name":"SecY_dom_sf","locations":[{"end":475,"start":9}],"match_end":475,"match_start":9,"name":"SecY subunit domain"},{"dbname":"PANTHER","id":"PTHR10906","interpro_description":"SecY/SEC61-alpha family","interpro_id":"IPR002208","interpro_name":"SecY/SEC61-alpha","locations":[{"end":442,"start":17}],"match_end":442,"match_start":17,"name":"SECY/SEC61-ALPHA FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF004557","interpro_description":"SecY/SEC61-alpha family","interpro_id":"IPR002208","interpro_name":"SecY/SEC61-alpha","locations":[{"end":466,"start":7}],"match_end":466,"match_start":7,"name":"SecY_Sec61alpha"}],"location":{"chromosome_name":"supercont5.1","end_pos":243403,"start_pos":241526,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":130,"start":119}},{"range":{"end":186,"start":173}}],"name":"ssh1","ortholog_annotations":[{"gene_uniquename":"SJAG_02208","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17702","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02208","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18276","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02208","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.17","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02208","ortholog_taxonid":4932,"ortholog_uniquename":"YBR283C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02208","ortholog_taxonid":4932,"ortholog_uniquename":"YBR283C","reference_uniquename":"PMID:26896847"}],"product":"Ssh1 translocon subunit Ssh1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005048"],"not-binding":["GO:0008320"]}},"subset_termids":["GO:0055085","GO:0005783","GO:0005048","GO:0006605","MONDO:0005240","GO:0140318","MONDO:0005046","GO:0061024","GO:0005789","GO:0022857","MONDO:0005570"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005048":null,"GO:0005784":null,"GO:0006616":null,"GO:0008320":null,"GO:0045048":null,"MONDO:0014891":null,"MONDO:0958013":null,"MONDO:0958017":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":54,"start":32}},{"assigned_by":"TMHMM","range":{"end":99,"start":77}},{"assigned_by":"TMHMM","range":{"end":142,"start":120}},{"assigned_by":"TMHMM","range":{"end":168,"start":146}},{"assigned_by":"TMHMM","range":{"end":197,"start":175}},{"assigned_by":"TMHMM","range":{"end":265,"start":243}},{"assigned_by":"TMHMM","range":{"end":307,"start":285}},{"assigned_by":"TMHMM","range":{"end":442,"start":420}},{"assigned_by":"TMHMM","range":{"end":466,"start":447}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02208.1"],"transcripts_by_uniquename":{"SJAG_02208.1":null},"uniprot_identifier":"B6K1U7","uniquename":"SJAG_02208"}


id: SJAG_02209
data:
  {"coiled_coil_coords":[{"range":{"end":200,"start":173}}],"cv_annotations":{"biological_process":[{"annotations":[77678],"is_not":false,"summary":null,"term":"GO:0016973"}],"cellular_component":[{"annotations":[106540],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[106541],"is_not":false,"summary":null,"term":"GO:0005730"}]},"dbxrefs":["InterPro:IPR017923","InterPro:IPR035441","UniProtKB/TrEMBL:B6K1U8","EnsemblGenomes-Gn:SJAG_02209","GOA:B6K1U8","EnsemblGenomes-Tr:EEB07129"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":139,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"}],"genes_by_uniquename":{"HGNC:25467":null,"SJAG_02209":null,"SPBC19G7.16":null,"YPR133C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TFIIS helical bundle-like domain","id":"PF08711","interpro_description":"Transcription factor IIS, N-terminal","interpro_id":"IPR017923","interpro_name":"TFIIS_N","locations":[{"end":308,"start":259}],"match_end":308,"match_start":259,"name":"Med26"},{"dbname":"PROSITE_PROFILES","description":"TFIIS N-terminal domain profile.","id":"PS51319","interpro_description":"Transcription factor IIS, N-terminal","interpro_id":"IPR017923","interpro_name":"TFIIS_N","locations":[{"end":311,"start":234}],"match_end":311,"match_start":234,"name":"TFIIS_N"},{"dbname":"FUNFAM","description":"Putative Transcription factor IWS1","id":"G3DSA:1.20.930.10:FF:000003","locations":[{"end":314,"start":172}],"match_end":314,"match_start":172},{"dbname":"SUPERFAMILY","id":"SSF47676","interpro_description":"TFIIS/LEDGF domain superfamily","interpro_id":"IPR035441","interpro_name":"TFIIS/LEDGF_dom_sf","locations":[{"end":310,"start":257}],"match_end":310,"match_start":257,"name":"Conserved domain common to transcription factors TFIIS, elongin A, CRSP70"},{"dbname":"GENE3D","id":"G3DSA:1.20.930.10","interpro_description":"TFIIS/LEDGF domain superfamily","interpro_id":"IPR035441","interpro_name":"TFIIS/LEDGF_dom_sf","locations":[{"end":314,"start":172}],"match_end":314,"match_start":172,"name":"Conserved domain common to transcription factors TFIIS, elongin A, CRSP70"},{"dbname":"PANTHER","id":"PTHR46010","interpro_description":"RNA Polymerase II Transcription Factor IWS1","interpro_id":"IPR051037","interpro_name":"RNAPII_TF_IWS1","locations":[{"end":413,"start":76}],"match_end":413,"match_start":76,"name":"PROTEIN IWS1 HOMOLOG"},{"dbname":"COILS","id":"Coil","locations":[{"end":200,"start":173}],"match_end":200,"match_start":173,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":139,"start":1}],"match_end":139,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":55,"start":40}],"match_end":55,"match_start":40,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":245025,"start_pos":243781,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":108,"start":90}}],"name":"iws1","ortholog_annotations":[{"gene_uniquename":"SJAG_02209","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25467","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02209","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02209","ortholog_taxonid":4932,"ortholog_uniquename":"YPR133C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02209","ortholog_taxonid":4932,"ortholog_uniquename":"YPR133C","reference_uniquename":"PMID:26896847"}],"product":"chromatin remodelling factor Iws1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0006913","GO:0015630","GO:0072686","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0016973":null,"GO:0072686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02209.1"],"transcripts_by_uniquename":{"SJAG_02209.1":null},"uniprot_identifier":"B6K1U8","uniquename":"SJAG_02209"}


id: SJAG_02210
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77345],"is_not":false,"summary":null,"term":"GO:0006607"},{"annotations":[77346],"is_not":false,"summary":null,"term":"GO:0006999"},{"annotations":[77343],"is_not":false,"summary":null,"term":"GO:0036228"},{"annotations":[106538],"is_not":false,"summary":null,"term":"GO:0000054"}],"cellular_component":[{"annotations":[106529],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106531],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[77347],"is_not":false,"summary":null,"term":"GO:0044613"}],"molecular_function":[{"annotations":[77344],"is_not":false,"summary":null,"term":"GO:0017056"}],"mondo":[{"annotations":[86704],"is_not":false,"summary":null,"term":"MONDO:0957385"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02210","InterPro:IPR024864","EnsemblGenomes-Tr:EEB07131","GOA:B6K1V0","UniProtKB/TrEMBL:B6K1V0","InterPro:IPR025712"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":106,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"}],"genes_by_uniquename":{"HGNC:17359":null,"SJAG_02210":null,"SPBC19G7.15":null,"YGR119C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleoporin complex subunit 54","id":"PF13874","interpro_description":"Nucleoporin Nup54, alpha-helical domain","interpro_id":"IPR025712","interpro_name":"Nup54_alpha-helical_dom","locations":[{"end":361,"start":224}],"match_end":361,"match_start":224,"name":"Nup54"},{"dbname":"GENE3D","id":"G3DSA:1.20.5.490","locations":[{"end":328,"start":264}],"match_end":328,"match_start":264,"name":"Single helix bin"},{"dbname":"PANTHER","id":"PTHR13000","interpro_description":"Nucleoporin Nup54/Nup57/Nup44","interpro_id":"IPR024864","interpro_name":"Nup54/Nup57/Nup44","locations":[{"end":428,"start":1}],"match_end":428,"match_start":1,"name":"NUCLEOPORIN P54"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":106,"start":1}],"match_end":106,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":57,"start":43}],"match_end":57,"match_start":43,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":35,"start":14},{"end":106,"start":67}],"match_end":106,"match_start":14,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":247546,"start_pos":246198,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":56,"start":42}},{"range":{"end":126,"start":107}},{"range":{"end":187,"start":170}},{"range":{"end":346,"start":329}}],"name":"nup44","ortholog_annotations":[{"gene_uniquename":"SJAG_02210","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17359","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02210","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02210","ortholog_taxonid":4932,"ortholog_uniquename":"YGR119C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02210","ortholog_taxonid":4932,"ortholog_uniquename":"YGR119C","reference_uniquename":"PMID:26896847"}],"product":"nucleoporin Nup44","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0017056"]}},"subset_termids":["GO:0034399","GO:0005198","GO:0005643","MONDO:0003441","GO:0006913","GO:0005829","GO:0042254","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000054":null,"GO:0005829":null,"GO:0006607":null,"GO:0006999":null,"GO:0017056":null,"GO:0034399":null,"GO:0036228":null,"GO:0044613":null,"MONDO:0957385":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02210.1"],"transcripts_by_uniquename":{"SJAG_02210.1":null},"uniprot_identifier":"B6K1V0","uniquename":"SJAG_02210"}


id: SJAG_02211
data:
  {"coiled_coil_coords":[{"range":{"end":94,"start":74}}],"cv_annotations":{"biological_process":[{"annotations":[70033],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[106528],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[106524],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[70032],"is_not":false,"summary":null,"term":"GO:0017119"}],"mondo":[{"annotations":[87392],"is_not":false,"summary":null,"term":"MONDO:0013325"}]},"dbxrefs":["GOA:B6K1V1","EnsemblGenomes-Tr:EEB07132","UniProtKB/TrEMBL:B6K1V1","EnsemblGenomes-Gn:SJAG_02211","InterPro:IPR019465"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"}],"genes_by_uniquename":{"HGNC:14857":null,"SJAG_02211":null,"SPBC19G7.14c":null,"YNL051W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Conserved oligomeric Golgi complex subunit 5, N-terminal","id":"PF10392","interpro_description":"Conserved oligomeric Golgi complex subunit 5, N-terminal","interpro_id":"IPR049176","interpro_name":"COG5_N","locations":[{"end":135,"start":9}],"match_end":135,"match_start":9,"name":"COG5_N"},{"dbname":"PFAM","description":"Conserved oligomeric Golgi complex subunit 5, C-terminal","id":"PF20649","interpro_description":"Conserved oligomeric Golgi complex subunit 5, helical domain","interpro_id":"IPR048485","interpro_name":"COG5_helical","locations":[{"end":379,"start":181}],"match_end":379,"match_start":181,"name":"COG5_C"},{"dbname":"PANTHER","id":"PTHR13228","interpro_description":"Conserved oligomeric Golgi complex subunit 5","interpro_id":"IPR019465","interpro_name":"Cog5","locations":[{"end":321,"start":5}],"match_end":321,"match_start":5,"name":"CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5"},{"dbname":"COILS","id":"Coil","locations":[{"end":94,"start":74}],"match_end":94,"match_start":74,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":249290,"start_pos":247796,"strand":"forward"},"name":"cog5","ortholog_annotations":[{"gene_uniquename":"SJAG_02211","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14857","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02211","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02211","ortholog_taxonid":4932,"ortholog_uniquename":"YNL051W","reference_uniquename":"PMID:29761456"}],"product":"Golgi transport complex subunit Cog5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["MONDO:0024322","MONDO:0005066","GO:0016192","GO:0005794","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0006886":null,"GO:0006891":null,"GO:0017119":null,"MONDO:0013325":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02211.1"],"transcripts_by_uniquename":{"SJAG_02211.1":null},"uniprot_identifier":"B6K1V1","uniquename":"SJAG_02211"}


id: SJAG_02212
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74533],"is_not":false,"summary":null,"term":"GO:0010833"}],"cellular_component":[{"annotations":[106518],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[106519],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[106520],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74534],"is_not":false,"summary":null,"term":"GO:0003691"}]},"dbxrefs":["GOA:B6K1V2","EnsemblGenomes-Tr:EEB07133","InterPro:IPR001005","EnsemblGenomes-Gn:SJAG_02212","UniProtKB/TrEMBL:B6K1V2","InterPro:IPR017930","InterPro:IPR009057","InterPro:IPR013867"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":29,"start":1}},{"range":{"end":377,"start":319}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ssh1","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"}],"genes_by_uniquename":{"SJAG_02212":null,"SPBC19G7.13":null,"YPL128C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Telomere repeat binding factor (TRF)","id":"PF08558","interpro_description":"Telomere repeat-binding factor, dimerisation domain","interpro_id":"IPR013867","interpro_name":"Telomere_rpt-bd_fac_dimer_dom","locations":[{"end":320,"start":99}],"match_end":320,"match_start":99,"name":"TRF"},{"dbname":"PFAM","description":"Myb-like DNA-binding domain","id":"PF00249","interpro_description":"SANT/Myb domain","interpro_id":"IPR001005","interpro_name":"SANT/Myb","locations":[{"end":444,"start":399}],"match_end":444,"match_start":399,"name":"Myb_DNA-binding"},{"dbname":"PROSITE_PROFILES","description":"Myb-type HTH DNA-binding domain profile.","id":"PS51294","interpro_description":"Myb domain","interpro_id":"IPR017930","interpro_name":"Myb_dom","locations":[{"end":451,"start":394}],"match_end":451,"match_start":394,"name":"HTH_MYB"},{"dbname":"PROSITE_PROFILES","description":"Myb-like domain profile.","id":"PS50090","interpro_description":"SANT/Myb domain","interpro_id":"IPR001005","interpro_name":"SANT/Myb","locations":[{"end":447,"start":394}],"match_end":447,"match_start":394,"name":"MYB_LIKE"},{"dbname":"SMART","id":"SM00717","interpro_description":"SANT/Myb domain","interpro_id":"IPR001005","interpro_name":"SANT/Myb","locations":[{"end":457,"start":398}],"match_end":457,"match_start":398,"name":"sant"},{"dbname":"FUNFAM","description":"MYB DNA binding protein","id":"G3DSA:1.10.10.60:FF:000137","locations":[{"end":456,"start":395}],"match_end":456,"match_start":395},{"dbname":"SUPERFAMILY","id":"SSF46689","interpro_description":"Homedomain-like superfamily","interpro_id":"IPR009057","interpro_name":"Homeodomain-like_sf","locations":[{"end":463,"start":395}],"match_end":463,"match_start":395,"name":"Homeodomain-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.60","locations":[{"end":456,"start":392}],"match_end":456,"match_start":392},{"dbname":"PANTHER","id":"PTHR47807","interpro_description":"Telomeric DNA-binding and transcriptional regulator","interpro_id":"IPR052833","interpro_name":"Telomeric_DNA-bd_trans-reg","locations":[{"end":479,"start":3}],"match_end":479,"match_start":3,"name":"PROTEIN TBF1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":29,"start":1},{"end":377,"start":319}],"match_end":377,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":377,"start":341}],"match_end":377,"match_start":341,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":250977,"start_pos":249487,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":339,"start":325}}],"name":"tbf1","ortholog_annotations":[{"gene_uniquename":"SJAG_02212","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02212","ortholog_taxonid":4932,"ortholog_uniquename":"YPL128C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02212","ortholog_taxonid":4932,"ortholog_uniquename":"YPL128C","reference_uniquename":"PMID:26896847"}],"product":"DNA binding factor Trf1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003691"]}},"subset_termids":["GO:0005694","GO:0032200","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003691":null,"GO:0005634":null,"GO:0010833":null,"GO:0140445":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":194,"start":172}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02212.1"],"transcripts_by_uniquename":{"SJAG_02212.1":null},"uniprot_identifier":"B6K1V2","uniquename":"SJAG_02212"}


id: SJAG_02213
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74698],"is_not":false,"summary":null,"term":"GO:0000290"},{"annotations":[74697],"is_not":false,"summary":null,"term":"GO:0033962"}],"cellular_component":[{"annotations":[106513],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74695],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[74696],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02213","GOA:B6K1V3","InterPro:IPR039900","EnsemblGenomes-Tr:EEB07134","UniProtKB/TrEMBL:B6K1V3","InterPro:IPR019167"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":107,"start":87}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"}],"genes_by_uniquename":{"HGNC:26721":null,"SJAG_02213":null,"SPBC19G7.10c":null,"YCR077C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Topoisomerase II-associated protein PAT1","id":"PF09770","interpro_description":"mRNA decay factor PAT1 domain","interpro_id":"IPR019167","interpro_name":"PAT1_dom","locations":[{"end":720,"start":243}],"match_end":720,"match_start":243,"name":"PAT1"},{"dbname":"PANTHER","id":"PTHR21551","interpro_description":"Pat1-like","interpro_id":"IPR039900","interpro_name":"Pat1-like","locations":[{"end":673,"start":114}],"match_end":673,"match_start":114,"name":"TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":107,"start":87}],"match_end":107,"match_start":87,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":254128,"start_pos":251789,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":352,"start":342}},{"range":{"end":523,"start":512}}],"name":"pdc2","ortholog_annotations":[{"gene_uniquename":"SJAG_02213","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26721","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02213","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02213","ortholog_taxonid":4932,"ortholog_uniquename":"YCR077C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02213","ortholog_taxonid":4932,"ortholog_uniquename":"YCR077C","reference_uniquename":"PMID:26896847"}],"product":"topoisomerase II-associated deadenylation-dependent mRNA-decapping factor Pdc2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005829","GO:0000932","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000290":null,"GO:0000932":null,"GO:0003723":null,"GO:0005829":null,"GO:0033962":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02213.1"],"transcripts_by_uniquename":{"SJAG_02213.1":null},"uniprot_identifier":"B6K1V3","uniquename":"SJAG_02213"}


id: SJAG_02214
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106508],"is_not":false,"summary":null,"term":"GO:0120292"},{"annotations":[106509],"is_not":false,"summary":null,"term":"GO:0016485"}],"cellular_component":[{"annotations":[106504],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106505],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[106506],"is_not":false,"summary":null,"term":"GO:0034399"}],"molecular_function":[{"annotations":[70409],"is_not":false,"summary":null,"term":"GO:0016929"},{"annotations":[106511],"is_not":false,"summary":null,"term":"GO:0070139"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02214","InterPro:IPR038765","EnsemblGenomes-Tr:EEB07135","GOA:B6K1V4","InterPro:IPR003653","UniProtKB/TrEMBL:B6K1V4"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":26,"start":1}},{"range":{"end":164,"start":116}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"}],"genes_by_uniquename":{"HGNC:17862":null,"HGNC:17927":null,"HGNC:23116":null,"HGNC:28407":null,"SJAG_02214":null,"SPBC19G7.09":null,"YPL020C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ulp1 protease family, C-terminal catalytic domain","id":"PF02902","interpro_description":"Ulp1 protease family, C-terminal catalytic domain","interpro_id":"IPR003653","interpro_name":"Peptidase_C48_C","locations":[{"end":504,"start":334}],"match_end":504,"match_start":334,"name":"Peptidase_C48"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin-like protease family profile.","id":"PS50600","interpro_description":"Ulp1 protease family, C-terminal catalytic domain","interpro_id":"IPR003653","interpro_name":"Peptidase_C48_C","locations":[{"end":481,"start":320}],"match_end":481,"match_start":320,"name":"ULP_PROTEASE"},{"dbname":"FUNFAM","description":"Sentrin-specific protease 1","id":"G3DSA:3.40.395.10:FF:000001","locations":[{"end":511,"start":285}],"match_end":511,"match_start":285},{"dbname":"SUPERFAMILY","id":"SSF54001","interpro_description":"Papain-like cysteine peptidase superfamily","interpro_id":"IPR038765","interpro_name":"Papain-like_cys_pep_sf","locations":[{"end":507,"start":290}],"match_end":507,"match_start":290,"name":"Cysteine proteinases"},{"dbname":"GENE3D","id":"G3DSA:3.40.395.10","locations":[{"end":511,"start":286}],"match_end":511,"match_start":286,"name":"Adenoviral Proteinase; Chain A"},{"dbname":"PANTHER","id":"PTHR12606","locations":[{"end":502,"start":147}],"match_end":502,"match_start":147,"name":"SENTRIN/SUMO-SPECIFIC PROTEASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":26,"start":1},{"end":164,"start":116}],"match_end":164,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":255846,"start_pos":254311,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":104,"start":92}},{"range":{"end":122,"start":113}},{"range":{"end":187,"start":175}}],"name":"ulp1","ortholog_annotations":[{"gene_uniquename":"SJAG_02214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17862","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17927","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23116","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28407","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02214","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02214","ortholog_taxonid":4932,"ortholog_uniquename":"YPL020C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02214","ortholog_taxonid":4932,"ortholog_uniquename":"YPL020C","reference_uniquename":"PMID:26896847"}],"product":"SUMO deconjugating enzyme Ulp1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016929","GO:0070139"]}},"subset_termids":["GO:0140096","GO:0008233","GO:0034399","GO:0005829","GO:0005634","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null,"GO:0005829":null,"GO:0016485":null,"GO:0016929":null,"GO:0034399":null,"GO:0070139":null,"GO:0120292":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02214.1"],"transcripts_by_uniquename":{"SJAG_02214.1":null},"uniprot_identifier":"B6K1V4","uniquename":"SJAG_02214"}


id: SJAG_02215
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106500],"is_not":false,"summary":null,"term":"GO:0140278"}],"cellular_component":[{"annotations":[106498],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72048],"is_not":false,"summary":null,"term":"GO:0000935"}],"molecular_function":[{"annotations":[106501],"is_not":false,"summary":null,"term":"GO:0005509"},{"annotations":[106502],"is_not":false,"summary":null,"term":"GO:0043495"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02215","GOA:B6K1V5","EnsemblGenomes-Tr:EEB07136","InterPro:IPR011022","UniProtKB/TrEMBL:B6K1V5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"}],"genes_by_uniquename":{"SJAG_02215":null,"SPBC19G7.08c":null,"YPL066W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Arrestin (or S-antigen), C-terminal domain","id":"PF02752","interpro_description":"Arrestin C-terminal-like domain","interpro_id":"IPR011022","interpro_name":"Arrestin_C-like","locations":[{"end":407,"start":271}],"match_end":407,"match_start":271,"name":"Arrestin_C"},{"dbname":"SMART","id":"SM01017","interpro_description":"Arrestin C-terminal-like domain","interpro_id":"IPR011022","interpro_name":"Arrestin_C-like","locations":[{"end":407,"start":271}],"match_end":407,"match_start":271,"name":"Arrestin_C_2"},{"dbname":"PANTHER","id":"PTHR36419","interpro_description":"Cytokinesis Signaling Regulator","interpro_id":"IPR053060","interpro_name":"Cytokinesis_Signaling_Reg","locations":[{"end":461,"start":10}],"match_end":461,"match_start":10,"name":"ARRESTIN FAMILY PROTEIN 1"}],"location":{"chromosome_name":"supercont5.1","end_pos":257749,"start_pos":256355,"strand":"forward"},"name":"art1","ortholog_annotations":[{"gene_uniquename":"SJAG_02215","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02215","ortholog_taxonid":4932,"ortholog_uniquename":"YPL066W","reference_uniquename":"PMID:29761456"}],"product":"arrestin-related substrate adaptor for RhoGEF, Art1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005509"],"not-binding":["GO:0043495"]}},"subset_termids":["GO:0000281","GO:0005829","GO:0060090","GO:0000935"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000935":null,"GO:0005509":null,"GO:0005829":null,"GO:0043495":null,"GO:0140278":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02215.1"],"transcripts_by_uniquename":{"SJAG_02215.1":null},"uniprot_identifier":"B6K1V5","uniquename":"SJAG_02215"}


id: SJAG_02216
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[88196],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[98506],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["InterPro:IPR013903","EnsemblGenomes-Gn:SJAG_02216","EnsemblGenomes-Tr:EEB07137","UniProtKB/TrEMBL:B6K1V6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"}],"genes_by_uniquename":{"SJAG_02216":null,"SPAC10F6.15":null,"SPAC11G7.06c":null,"SPAC4G9.07":null,"SPCC737.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Uncharacterised protein family (UPF0300)","id":"PF08594","interpro_description":"Meiotic expression up-regulated protein","interpro_id":"IPR013903","interpro_name":"Meiotic_expression","locations":[{"end":424,"start":245}],"match_end":424,"match_start":245,"name":"UPF0300"}],"location":{"chromosome_name":"supercont5.1","end_pos":259988,"start_pos":258447,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":142,"start":130}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_02216","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC10F6.15","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02216","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11G7.06c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02216","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4G9.07","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02216","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC737.04","reference_uniquename":"PMID:21511999"}],"product":"UPF0300 family protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0005938":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02216.1"],"transcripts_by_uniquename":{"SJAG_02216.1":null},"uniprot_identifier":"B6K1V6","uniquename":"SJAG_02216"}


id: SJAG_02217
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":677,"start":44}}],"coiled_coil_coords":[{"range":{"end":70,"start":43}}],"cv_annotations":{"biological_process":[{"annotations":[106495],"is_not":false,"summary":null,"term":"GO:0140053"}],"cellular_component":[{"annotations":[106493],"is_not":false,"summary":null,"term":"GO:0005759"}],"sequence":[{"annotations":[81126],"is_not":false,"summary":null,"term":"SO:0001808"}]},"dbxrefs":["InterPro:IPR011990","GOA:B6K1V7","InterPro:IPR002885","EnsemblGenomes-Gn:SJAG_02217","EnsemblGenomes-Tr:EEB07138","UniProtKB/Swiss-Prot:B6K1V7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"}],"genes_by_uniquename":{"SJAG_02217":null,"SPBC19G7.07c":null,"YGR150C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PPR repeat family","id":"PF13041","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":328,"start":280}],"match_end":328,"match_start":280,"name":"PPR_2"},{"dbname":"PFAM","description":"PPR repeat","id":"PF01535","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":276,"start":247}],"match_end":276,"match_start":247,"name":"PPR"},{"dbname":"PROSITE_PROFILES","description":"Pentatricopeptide (PPR) repeat profile.","id":"PS51375","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":279,"start":245},{"end":351,"start":317}],"match_end":351,"match_start":245,"name":"PPR"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":484,"start":157}],"match_end":484,"match_start":157,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR47447","locations":[{"end":441,"start":191}],"match_end":441,"match_start":191,"name":"OS03G0856100 PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":70,"start":43}],"match_end":70,"match_start":43,"name":"Coil"},{"dbname":"NCBIFAM","description":"pentatricopeptide repeat","id":"TIGR00756","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":280,"start":247},{"end":349,"start":320}],"match_end":349,"match_start":247,"name":"PPR"}],"location":{"chromosome_name":"supercont5.1","end_pos":262836,"start_pos":260803,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":116,"start":105}},{"range":{"end":485,"start":473}}],"name":"ppr3","ortholog_annotations":[{"gene_uniquename":"SJAG_02217","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02217","ortholog_taxonid":4932,"ortholog_uniquename":"YGR150C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial PPR repeat protein Ppr3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{},"subset_termids":["GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005759":null,"GO:0140053":null,"SO:0001808":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02217.1"],"transcripts_by_uniquename":{"SJAG_02217.1":null},"transit_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000255","feature_type":"transit peptide","range":{"end":43,"start":1},"reference":null,"termid":"SO:0001808"},"uniprot_identifier":"B6K1V7","uniquename":"SJAG_02217"}


id: SJAG_02218
data:
  {"cv_annotations":{"biological_process":[{"annotations":[67867],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[106487],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106488],"is_not":false,"summary":null,"term":"GO:0097221"}],"molecular_function":[{"annotations":[106490],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[106492],"is_not":false,"summary":null,"term":"GO:0000978"}],"mondo":[{"annotations":[87661],"is_not":false,"summary":null,"term":"MONDO:0012011"},{"annotations":[86536],"is_not":false,"summary":null,"term":"MONDO:0013266"}]},"dbxrefs":["InterPro:IPR002100","GOA:B6K1V8","InterPro:IPR033897","InterPro:IPR036879","EnsemblGenomes-Gn:SJAG_02218","UniProtKB/TrEMBL:B6K1V8","EnsemblGenomes-Tr:EEB07139"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":106,"start":84}},{"range":{"end":194,"start":146}},{"range":{"end":353,"start":274}},{"range":{"end":440,"start":418}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"},{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"}],"genes_by_uniquename":{"HGNC:6993":null,"HGNC:6995":null,"HGNC:6996":null,"HGNC:6997":null,"SJAG_02218":null,"SPBC19G7.06":null,"YBR182C":null,"YMR042W":null,"YMR043W":null,"YPL089C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SRF-type transcription factor (DNA-binding and dimerisation domain)","id":"PF00319","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":60,"start":13}],"match_end":60,"match_start":13,"name":"SRF-TF"},{"dbname":"CDD","description":"MADS_SRF_like","id":"cd00266","interpro_description":"SRF-like, MADS-box","interpro_id":"IPR033897","interpro_name":"SRF-like_MADS-box","locations":[{"end":94,"start":11}],"match_end":94,"match_start":11,"name":"MADS_SRF_like"},{"dbname":"PROSITE_PROFILES","description":"MADS-box domain profile.","id":"PS50066","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":64,"start":11}],"match_end":64,"match_start":11,"name":"MADS_BOX_2"},{"dbname":"SMART","id":"SM00432","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":63,"start":1}],"match_end":63,"match_start":1,"name":"madsneu2"},{"dbname":"PRINTS","description":"MADS domain signature","id":"PR00404","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":62,"start":6}],"match_end":62,"match_start":6,"name":"MADSDOMAIN"},{"dbname":"SUPERFAMILY","id":"SSF55455","interpro_description":"Transcription factor, MADS-box superfamily","interpro_id":"IPR036879","interpro_name":"TF_MADSbox_sf","locations":[{"end":77,"start":10}],"match_end":77,"match_start":10,"name":"SRF-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1810.10","interpro_description":"Transcription factor, MADS-box superfamily","interpro_id":"IPR036879","interpro_name":"TF_MADSbox_sf","locations":[{"end":81,"start":16}],"match_end":81,"match_start":16},{"dbname":"PANTHER","id":"PTHR11945","locations":[{"end":106,"start":10}],"match_end":106,"match_start":10,"name":"MADS BOX PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":106,"start":84},{"end":194,"start":146},{"end":353,"start":274},{"end":440,"start":418}],"match_end":440,"match_start":84,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":322,"start":309}],"match_end":322,"match_start":309,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":290,"start":277},{"end":338,"start":325}],"match_end":338,"match_start":277,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":155,"start":146}],"match_end":155,"match_start":146,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":265134,"start_pos":263420,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":321,"start":308}},{"range":{"end":383,"start":369}},{"range":{"end":438,"start":423}}],"name":"mbx1","ortholog_annotations":[{"gene_uniquename":"SJAG_02218","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6993","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6995","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6996","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6997","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":4932,"ortholog_uniquename":"YBR182C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":4932,"ortholog_uniquename":"YMR042W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":4932,"ortholog_uniquename":"YMR043W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02218","ortholog_taxonid":4932,"ortholog_uniquename":"YPL089C","reference_uniquename":"PMID:26896847"}],"product":"DNA-binding transcription factor, MADS-box Mbx1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978"],"not-binding":["GO:0001228"]}},"subset_termids":["MONDO:0005267","GO:0006351","GO:0005829","GO:0005634","GO:0003700","GO:0006355","MONDO:0000426"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0001228":null,"GO:0005829":null,"GO:0045944":null,"GO:0097221":null,"MONDO:0012011":null,"MONDO:0013266":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02218.1"],"transcripts_by_uniquename":{"SJAG_02218.1":null},"uniprot_identifier":"B6K1V8","uniquename":"SJAG_02218"}


id: SJAG_02222
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106479],"is_not":false,"summary":null,"term":"GO:0000747"},{"annotations":[106480],"is_not":false,"summary":null,"term":"GO:0071970"},{"annotations":[106484],"is_not":false,"summary":null,"term":"GO:0031671"},{"annotations":[106485],"is_not":false,"summary":null,"term":"GO:2000769"}],"cellular_component":[{"annotations":[62930],"is_not":false,"summary":null,"term":"GO:0000148"},{"annotations":[106471],"is_not":false,"summary":null,"term":"GO:1902716"},{"annotations":[106474],"is_not":false,"summary":null,"term":"GO:0032154"},{"annotations":[106475],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[106476],"is_not":false,"summary":null,"term":"GO:0009277"},{"annotations":[106477],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[106478],"is_not":false,"summary":null,"term":"GO:0035840"}],"molecular_function":[{"annotations":[75078],"is_not":false,"summary":null,"term":"GO:0003843"}]},"dbxrefs":["InterPro:IPR003440","UniProtKB/TrEMBL:B6K1V9","InterPro:IPR026899","EnsemblGenomes-Tr:EEB07140","GOA:B6K1V9","EnsemblGenomes-Gn:SJAG_02222"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"art1","uniquename":"SJAG_02215"},{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"}],"genes_by_uniquename":{"SJAG_02222":null,"SPBC19G7.05c":null,"YGR032W":null,"YLR342W":null,"YMR306W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"1,3-beta-glucan synthase component","id":"PF02364","interpro_description":"Glycosyl transferase 48 domain","interpro_id":"IPR003440","interpro_name":"Glyco_trans_48_dom","locations":[{"end":1347,"start":529}],"match_end":1347,"match_start":529,"name":"Glucan_synthase"},{"dbname":"PFAM","description":"1,3-beta-glucan synthase component FKS1, second domain","id":"PF23605","interpro_description":"1,3-beta-glucan synthase component FKS1-like, domain-2","interpro_id":"IPR056261","interpro_name":"FKS1-like_dom2","locations":[{"end":330,"start":160}],"match_end":330,"match_start":160,"name":"FKS1_dom2"},{"dbname":"PFAM","description":"1,3-beta-glucan synthase subunit FKS1, domain-1","id":"PF14288","interpro_description":"1,3-beta-glucan synthase component FKS1-like, domain-1","interpro_id":"IPR026899","interpro_name":"FKS1-like_dom1","locations":[{"end":129,"start":22}],"match_end":129,"match_start":22,"name":"FKS1_dom1"},{"dbname":"SMART","id":"SM01205","interpro_description":"1,3-beta-glucan synthase component FKS1-like, domain-1","interpro_id":"IPR026899","interpro_name":"FKS1-like_dom1","locations":[{"end":132,"start":20}],"match_end":132,"match_start":20,"name":"FKS1_dom1_2"},{"dbname":"PANTHER","id":"PTHR12741","locations":[{"end":1484,"start":527}],"match_end":1484,"match_start":527,"name":"LYST-INTERACTING PROTEIN LIP5  DOPAMINE RESPONSIVE PROTEIN DRG-1"}],"location":{"chromosome_name":"supercont5.1","end_pos":273378,"start_pos":268669,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":413,"start":395}},{"range":{"end":742,"start":729}},{"range":{"end":1334,"start":1319}},{"range":{"end":1533,"start":1519}}],"name":"bgs1","ortholog_annotations":[{"gene_uniquename":"SJAG_02222","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02222","ortholog_taxonid":4932,"ortholog_uniquename":"YGR032W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02222","ortholog_taxonid":4932,"ortholog_uniquename":"YLR342W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02222","ortholog_taxonid":4932,"ortholog_uniquename":"YMR306W","reference_uniquename":"PMID:29761456"}],"product":"primary septum and spore wall linear 1,3-beta-glucan synthase catalytic subunit Bgs1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003843"]}},"subset_termids":["GO:0005938","GO:0005618","GO:0005886","GO:0000935","GO:0007163","GO:0005975","GO:0016757","GO:0000747","GO:0000281","GO:0071554"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000148":null,"GO:0000747":null,"GO:0000935":null,"GO:0003843":null,"GO:0009277":null,"GO:0031671":null,"GO:0032154":null,"GO:0035840":null,"GO:0043332":null,"GO:0071970":null,"GO:1902716":null,"GO:2000769":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":195,"start":176}},{"assigned_by":"TMHMM","range":{"end":238,"start":216}},{"assigned_by":"TMHMM","range":{"end":272,"start":253}},{"assigned_by":"TMHMM","range":{"end":307,"start":285}},{"assigned_by":"TMHMM","range":{"end":360,"start":338}},{"assigned_by":"TMHMM","range":{"end":436,"start":414}},{"assigned_by":"TMHMM","range":{"end":1043,"start":1021}},{"assigned_by":"TMHMM","range":{"end":1096,"start":1077}},{"assigned_by":"TMHMM","range":{"end":1138,"start":1116}},{"assigned_by":"TMHMM","range":{"end":1180,"start":1158}},{"assigned_by":"TMHMM","range":{"end":1207,"start":1190}},{"assigned_by":"TMHMM","range":{"end":1300,"start":1278}},{"assigned_by":"TMHMM","range":{"end":1342,"start":1320}},{"assigned_by":"TMHMM","range":{"end":1373,"start":1355}},{"assigned_by":"TMHMM","range":{"end":1492,"start":1470}},{"assigned_by":"TMHMM","range":{"end":1535,"start":1513}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02222.1"],"transcripts_by_uniquename":{"SJAG_02222.1":null},"uniprot_identifier":"B6K1V9","uniquename":"SJAG_02222"}


id: SJAG_02223
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106468],"is_not":false,"summary":null,"term":"GO:0106300"}],"cellular_component":[{"annotations":[106467],"is_not":false,"summary":null,"term":"GO:0005634"}],"mondo":[{"annotations":[86329],"is_not":false,"summary":null,"term":"MONDO:0024773"}]},"dbxrefs":["InterPro:IPR006640","InterPro:IPR036910","UniProtKB/TrEMBL:B6K1W0","InterPro:IPR009071","GOA:B6K1W0","EnsemblGenomes-Tr:EEB07141","EnsemblGenomes-Gn:SJAG_02223"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":169,"start":26}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02216"},{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"}],"genes_by_uniquename":{"HGNC:15805":null,"SJAG_02223":null,"SPBC19G7.04":null,"YGR196C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"HMG (high mobility group) box","id":"PF00505","interpro_description":"High mobility group box domain","interpro_id":"IPR009071","interpro_name":"HMG_box_dom","locations":[{"end":398,"start":355}],"match_end":398,"match_start":355,"name":"HMG_box"},{"dbname":"PFAM","description":"SprT-like family","id":"PF10263","interpro_description":"SprT-like","interpro_id":"IPR006640","interpro_name":"SprT-like_domain","locations":[{"end":305,"start":189}],"match_end":305,"match_start":189,"name":"SprT-like"},{"dbname":"CDD","description":"HMG-box_SF","id":"cd00084","locations":[{"end":399,"start":355}],"match_end":399,"match_start":355,"name":"HMG-box_SF"},{"dbname":"SMART","id":"SM00731","interpro_description":"SprT-like","interpro_id":"IPR006640","interpro_name":"SprT-like_domain","locations":[{"end":350,"start":188}],"match_end":350,"match_start":188,"name":"sprt_6"},{"dbname":"SUPERFAMILY","id":"SSF47095","interpro_description":"High mobility group box domain superfamily","interpro_id":"IPR036910","interpro_name":"HMG_box_dom_sf","locations":[{"end":397,"start":355}],"match_end":397,"match_start":355,"name":"HMG-box"},{"dbname":"GENE3D","id":"G3DSA:1.10.30.10","interpro_description":"High mobility group box domain superfamily","interpro_id":"IPR036910","interpro_name":"HMG_box_dom_sf","locations":[{"end":410,"start":352}],"match_end":410,"match_start":352,"name":"High mobility group box domain"},{"dbname":"PANTHER","id":"PTHR23099","locations":[{"end":394,"start":45}],"match_end":394,"match_start":45,"name":"TRANSCRIPTIONAL REGULATOR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":169,"start":26}],"match_end":169,"match_start":26,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":114,"start":82},{"end":145,"start":135}],"match_end":145,"match_start":82,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":163,"start":146}],"match_end":163,"match_start":146,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":275092,"start_pos":273768,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":41,"start":24}},{"range":{"end":113,"start":81}},{"range":{"end":144,"start":128}},{"range":{"end":175,"start":163}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_02223","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15805","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02223","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02223","ortholog_taxonid":4932,"ortholog_uniquename":"YGR196C","reference_uniquename":"PMID:29761456"}],"product":"protein-DNA covalent cross-linking repair protein","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006281","MONDO:0005047","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0106300":null,"MONDO:0024773":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02223.1"],"transcripts_by_uniquename":{"SJAG_02223.1":null},"uniprot_identifier":"B6K1W0","uniquename":"SJAG_02223"}


id: SJAG_02224
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91960],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[91958],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[91959],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[91961],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07142","GOA:B6K095","EnsemblGenomes-Gn:SJAG_02224","InterPro:IPR006846","UniProtKB/TrEMBL:B6K095"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":34,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppr3","uniquename":"SJAG_02217"},{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"}],"genes_by_uniquename":{"HGNC:3597":null,"SJAG_02224":null,"SPAC19B12.04":null,"YLR287C-A":null,"YOR182C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S30","id":"PF04758","interpro_description":"Small ribosomal subunit protein eS30","interpro_id":"IPR006846","interpro_name":"Ribosomal_eS30","locations":[{"end":60,"start":3}],"match_end":60,"match_start":3,"name":"Ribosomal_S30"},{"dbname":"PANTHER","id":"PTHR12650","locations":[{"end":60,"start":1}],"match_end":60,"match_start":1,"name":"40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":34,"start":1}],"match_end":34,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":275662,"start_pos":275263,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":30,"start":18}}],"name":"rps3001","ortholog_annotations":[{"gene_uniquename":"SJAG_02224","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3597","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02224","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.04","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02224","ortholog_taxonid":4932,"ortholog_uniquename":"YLR287C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02224","ortholog_taxonid":4932,"ortholog_uniquename":"YLR287C-A","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02224","ortholog_taxonid":4932,"ortholog_uniquename":"YOR182C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02224","ortholog_taxonid":4932,"ortholog_uniquename":"YOR182C","reference_uniquename":"PMID:26896847"}],"product":"40S ribosomal protein S30","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005829","GO:0005198","GO:0002181","GO:0005634","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005634":null,"GO:0022627":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02224.1"],"transcripts_by_uniquename":{"SJAG_02224.1":null},"uniprot_identifier":"B6K095","uniquename":"SJAG_02224"}


id: SJAG_02225
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106459],"is_not":false,"summary":null,"term":"GO:0046656"},{"annotations":[106460],"is_not":false,"summary":null,"term":"GO:0046654"}],"cellular_component":[{"annotations":[106457],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106458],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[106461],"is_not":false,"summary":null,"term":"GO:0008696"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1W2","EnsemblGenomes-Tr:EEB07143","InterPro:IPR001544","GOA:B6K1W2","EnsemblGenomes-Gn:SJAG_02225","InterPro:IPR036038"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mbx1","uniquename":"SJAG_02218"},{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"}],"genes_by_uniquename":{"SJAG_02225":null,"SPBC19G7.02":null,"YMR289W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Amino-transferase class IV","id":"PF01063","interpro_description":"Aminotransferase class IV","interpro_id":"IPR001544","interpro_name":"Aminotrans_IV","locations":[{"end":203,"start":3}],"match_end":203,"match_start":3,"name":"Aminotran_4"},{"dbname":"SUPERFAMILY","id":"SSF56752","interpro_description":"Aminotransferase-like, PLP-dependent enzymes","interpro_id":"IPR036038","interpro_name":"Aminotransferase-like","locations":[{"end":204,"start":3}],"match_end":204,"match_start":3,"name":"D-aminoacid aminotransferase-like PLP-dependent enzymes"},{"dbname":"GENE3D","id":"G3DSA:3.30.470.10","interpro_description":"Branched-chain-amino-acid aminotransferase-like, N-terminal","interpro_id":"IPR043131","interpro_name":"BCAT-like_N","locations":[{"end":72,"start":1}],"match_end":72,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:3.20.10.10","interpro_description":"Branched-chain-amino-acid aminotransferase-like, C-terminal","interpro_id":"IPR043132","interpro_name":"BCAT-like_C","locations":[{"end":212,"start":74}],"match_end":212,"match_start":74},{"dbname":"PANTHER","id":"PTHR42743","interpro_description":"Class-IV Pyridoxal-Phosphate-Dependent Aminotransferase","interpro_id":"IPR050571","interpro_name":"Class-IV_PLP-Dep_Aminotrnsfr","locations":[{"end":205,"start":5}],"match_end":205,"match_start":5,"name":"AMINO-ACID AMINOTRANSFERASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":276426,"start_pos":275670,"strand":"reverse"},"name":"abz2","ortholog_annotations":[{"gene_uniquename":"SJAG_02225","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02225","ortholog_taxonid":4932,"ortholog_uniquename":"YMR289W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02225","ortholog_taxonid":4932,"ortholog_uniquename":"YMR289W","reference_uniquename":"PMID:26896847"}],"product":"4-amino-4-deoxychorismate lyase Abz2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008696"]}},"subset_termids":["GO:0005634","GO:0006766","GO:0016829","GO:0005829","GO:0042559"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008696":null,"GO:0046654":null,"GO:0046656":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02225.1"],"transcripts_by_uniquename":{"SJAG_02225.1":null},"uniprot_identifier":"B6K1W2","uniquename":"SJAG_02225"}


id: SJAG_02226
data:
  {"coiled_coil_coords":[{"range":{"end":518,"start":491}}],"cv_annotations":{"biological_process":[{"annotations":[106445],"is_not":false,"summary":null,"term":"GO:0007534"},{"annotations":[106446],"is_not":false,"summary":null,"term":"GO:0043570"},{"annotations":[73043],"is_not":false,"summary":null,"term":"GO:0006298"}],"cellular_component":[{"annotations":[106441],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73042],"is_not":false,"summary":null,"term":"GO:0032301"},{"annotations":[106443],"is_not":false,"summary":null,"term":"GO:0000228"}],"molecular_function":[{"annotations":[60407],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[106449],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[60409],"is_not":false,"summary":null,"term":"GO:0140664"},{"annotations":[106451],"is_not":false,"summary":null,"term":"GO:0000406"},{"annotations":[106452],"is_not":false,"summary":null,"term":"GO:0000400"},{"annotations":[106453],"is_not":false,"summary":null,"term":"GO:0032137"},{"annotations":[106454],"is_not":false,"summary":null,"term":"GO:0000404"},{"annotations":[106455],"is_not":false,"summary":null,"term":"GO:0032138"},{"annotations":[106456],"is_not":false,"summary":null,"term":"GO:0000403"}],"mondo":[{"annotations":[86731],"is_not":false,"summary":null,"term":"MONDO:0007356"},{"annotations":[86141],"is_not":false,"summary":null,"term":"MONDO:0030840"},{"annotations":[86015],"is_not":false,"summary":null,"term":"MONDO:0008018"}]},"dbxrefs":["InterPro:IPR007695","UniProtKB/TrEMBL:B6K1W3","InterPro:IPR011184","InterPro:IPR032642","GOA:B6K1W3","InterPro:IPR007861","InterPro:IPR016151","InterPro:IPR007696","InterPro:IPR007860","EnsemblGenomes-Gn:SJAG_02226","InterPro:IPR000432","InterPro:IPR027417","InterPro:IPR036187","InterPro:IPR036678","EnsemblGenomes-Tr:EEB07144"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":304,"start":283}},{"range":{"end":936,"start":916}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05872"},{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"}],"genes_by_uniquename":{"HGNC:7325":null,"SJAG_02226":null,"SPBC19G7.01c":null,"YOL090W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MutS domain II","id":"PF05188","interpro_description":"DNA mismatch repair protein MutS, connector domain","interpro_id":"IPR007860","interpro_name":"DNA_mmatch_repair_MutS_con_dom","locations":[{"end":276,"start":141}],"match_end":276,"match_start":141,"name":"MutS_II"},{"dbname":"PFAM","description":"MutS domain I","id":"PF01624","interpro_description":"DNA mismatch repair protein MutS-like, N-terminal","interpro_id":"IPR007695","interpro_name":"DNA_mismatch_repair_MutS-lik_N","locations":[{"end":118,"start":18}],"match_end":118,"match_start":18,"name":"MutS_I"},{"dbname":"PFAM","description":"MutS family domain IV","id":"PF05190","interpro_description":"DNA mismatch repair protein MutS, clamp","interpro_id":"IPR007861","interpro_name":"DNA_mismatch_repair_MutS_clamp","locations":[{"end":588,"start":493}],"match_end":588,"match_start":493,"name":"MutS_IV"},{"dbname":"PFAM","description":"MutS domain V","id":"PF00488","interpro_description":"DNA mismatch repair protein MutS, C-terminal","interpro_id":"IPR000432","interpro_name":"DNA_mismatch_repair_MutS_C","locations":[{"end":917,"start":727}],"match_end":917,"match_start":727,"name":"MutS_V"},{"dbname":"PFAM","description":"MutS domain III","id":"PF05192","interpro_description":"DNA mismatch repair protein MutS, core","interpro_id":"IPR007696","interpro_name":"DNA_mismatch_repair_MutS_core","locations":[{"end":492,"start":325},{"end":630,"start":589}],"match_end":630,"match_start":325,"name":"MutS_III"},{"dbname":"CDD","description":"ABC_MSH2_euk","id":"cd03285","interpro_description":"DNA mismatch repair protein Msh2, ATP-binding cassette domain","interpro_id":"IPR032642","interpro_name":"Msh2_ATP-bd","locations":[{"end":917,"start":695}],"match_end":917,"match_start":695,"name":"ABC_MSH2_euk"},{"dbname":"PROSITE_PATTERNS","description":"DNA mismatch repair proteins mutS family signature.","id":"PS00486","interpro_description":"DNA mismatch repair protein MutS, C-terminal","interpro_id":"IPR000432","interpro_name":"DNA_mismatch_repair_MutS_C","locations":[{"end":821,"start":805}],"match_end":821,"match_start":805,"name":"DNA_MISMATCH_REPAIR_2"},{"dbname":"SMART","id":"SM00534","interpro_description":"DNA mismatch repair protein MutS, C-terminal","interpro_id":"IPR000432","interpro_name":"DNA_mismatch_repair_MutS_C","locations":[{"end":914,"start":724}],"match_end":914,"match_start":724,"name":"mutATP5"},{"dbname":"SMART","id":"SM00533","interpro_description":"DNA mismatch repair protein MutS, core","interpro_id":"IPR007696","interpro_name":"DNA_mismatch_repair_MutS_core","locations":[{"end":707,"start":339}],"match_end":707,"match_start":339,"name":"DNAend"},{"dbname":"FUNFAM","description":"DNA mismatch repair protein","id":"G3DSA:3.40.50.300:FF:000523","locations":[{"end":988,"start":682}],"match_end":988,"match_start":682},{"dbname":"FUNFAM","description":"DNA mismatch repair protein","id":"G3DSA:1.10.1420.10:FF:000003","locations":[{"end":536,"start":318}],"match_end":536,"match_start":318},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":918,"start":693}],"match_end":918,"match_start":693,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF48334","interpro_description":"DNA mismatch repair protein MutS, core domain superfamily","interpro_id":"IPR036187","interpro_name":"DNA_mismatch_repair_MutS_sf","locations":[{"end":635,"start":321}],"match_end":635,"match_start":321,"name":"DNA repair protein MutS, domain III"},{"dbname":"GENE3D","id":"G3DSA:1.10.1420.10","locations":[{"end":488,"start":316},{"end":574,"start":491}],"match_end":574,"match_start":316},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":987,"start":688}],"match_end":987,"match_start":688},{"dbname":"GENE3D","id":"G3DSA:3.30.420.110","interpro_description":"MutS, connector domain superfamily","interpro_id":"IPR036678","interpro_name":"MutS_con_dom_sf","locations":[{"end":289,"start":113}],"match_end":289,"match_start":113,"name":"MutS, connector domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.1170.10","interpro_description":"DNA mismatch repair protein MutS, N-terminal","interpro_id":"IPR016151","interpro_name":"DNA_mismatch_repair_MutS_N","locations":[{"end":112,"start":1}],"match_end":112,"match_start":1,"name":"DNA repair protein MutS, domain I"},{"dbname":"PANTHER","id":"PTHR11361","interpro_description":"DNA mismatch repair MutS","interpro_id":"IPR045076","interpro_name":"MutS","locations":[{"end":946,"start":30}],"match_end":946,"match_start":30,"name":"DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF005813","interpro_description":"DNA mismatch repair Msh2-type","interpro_id":"IPR011184","interpro_name":"DNA_mismatch_repair_Msh2","locations":[{"end":989,"start":1}],"match_end":989,"match_start":1,"name":"MSH2"},{"dbname":"COILS","id":"Coil","locations":[{"end":518,"start":491}],"match_end":518,"match_start":491,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":304,"start":283},{"end":936,"start":916}],"match_end":936,"match_start":283,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":297,"start":288}],"match_end":297,"match_start":288,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":279881,"start_pos":276742,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":301,"start":282}},{"range":{"end":401,"start":390}},{"range":{"end":658,"start":647}},{"range":{"end":926,"start":914}}],"name":"msh2","ortholog_annotations":[{"gene_uniquename":"SJAG_02226","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7325","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02226","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02226","ortholog_taxonid":4932,"ortholog_uniquename":"YOL090W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02226","ortholog_taxonid":4932,"ortholog_uniquename":"YOL090W","reference_uniquename":"PMID:26896847"}],"product":"MutS protein homolog 2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0032138","GO:0000404","GO:0005524","GO:0032137","GO:0000403","GO:0000400","GO:0000406"],"not-binding":["GO:0140664","GO:0016887"]}},"subset_termids":["MONDO:0000426","MONDO:0004335","MONDO:0005066","GO:0005829","MONDO:0021190","GO:0016887","GO:0140097","GO:0005694","GO:0098772","GO:0140299","GO:0005634","GO:0006281","GO:0006310","MONDO:0004992"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000228":null,"GO:0000400":null,"GO:0000403":null,"GO:0000404":null,"GO:0000406":null,"GO:0005524":null,"GO:0005829":null,"GO:0006298":null,"GO:0007534":null,"GO:0016887":null,"GO:0032137":null,"GO:0032138":null,"GO:0032301":null,"GO:0043570":null,"GO:0140664":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0030840":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02226.1"],"transcripts_by_uniquename":{"SJAG_02226.1":null},"uniprot_identifier":"B6K1W3","uniquename":"SJAG_02226"}


id: SJAG_02227
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75034],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[107536],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[107537],"is_not":false,"summary":null,"term":"GO:0000974"},{"annotations":[107539],"is_not":false,"summary":null,"term":"GO:0005684"}]},"dbxrefs":["InterPro:IPR018230","GOA:B6K1W4","InterPro:IPR001748","UniProtKB/TrEMBL:B6K1W4","EnsemblGenomes-Tr:EEB07145","EnsemblGenomes-Gn:SJAG_02227"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bgs1","uniquename":"SJAG_02222"},{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"}],"genes_by_uniquename":{"HGNC:29629":null,"SJAG_02227":null,"SPBC24C6.11":null,"YCR063W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pre-mRNA-splicing factor BUD31","id":"PF01125","interpro_description":"Pre-mRNA-splicing factor BUD31","interpro_id":"IPR001748","interpro_name":"BUD31","locations":[{"end":144,"start":1}],"match_end":144,"match_start":1,"name":"BUD31"},{"dbname":"PROSITE_PATTERNS","description":"G10 protein signature 2.","id":"PS00998","interpro_description":"BUD31/G10-related, conserved site","interpro_id":"IPR018230","interpro_name":"BUD31/G10-rel_CS","locations":[{"end":143,"start":134}],"match_end":143,"match_start":134,"name":"G10_2"},{"dbname":"PRINTS","description":"G10 protein signature","id":"PR00322","interpro_description":"Pre-mRNA-splicing factor BUD31","interpro_id":"IPR001748","interpro_name":"BUD31","locations":[{"end":33,"start":13},{"end":122,"start":47},{"end":143,"start":134}],"match_end":143,"match_start":13,"name":"G10"},{"dbname":"PANTHER","id":"PTHR19411","interpro_description":"Pre-mRNA-splicing factor BUD31","interpro_id":"IPR001748","interpro_name":"BUD31","locations":[{"end":145,"start":1}],"match_end":145,"match_start":1,"name":"PROTEIN BUD31-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":280635,"start_pos":280048,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":141,"start":130}}],"name":"cwf14","ortholog_annotations":[{"gene_uniquename":"SJAG_02227","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29629","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02227","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02227","ortholog_taxonid":4932,"ortholog_uniquename":"YCR063W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02227","ortholog_taxonid":4932,"ortholog_uniquename":"YCR063W","reference_uniquename":"PMID:26896847"}],"product":"G10 protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000974":null,"GO:0005684":null,"GO:0045292":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02227.1"],"transcripts_by_uniquename":{"SJAG_02227.1":null},"uniprot_identifier":"B6K1W4","uniquename":"SJAG_02227"}


id: SJAG_02228
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75610],"is_not":false,"summary":null,"term":"GO:0000147"},{"annotations":[75611],"is_not":false,"summary":null,"term":"GO:0051666"},{"annotations":[107532],"is_not":false,"summary":null,"term":"GO:0034314"},{"annotations":[75609],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[107534],"is_not":false,"summary":null,"term":"GO:0044379"}],"cellular_component":[{"annotations":[75607],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[107527],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[107529],"is_not":false,"summary":null,"term":"GO:0043332"}],"molecular_function":[{"annotations":[75608],"is_not":false,"summary":null,"term":"GO:0071933"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02228","UniProtKB/TrEMBL:B6K1W5","InterPro:IPR018556","EnsemblGenomes-Tr:EEB07146","GOA:B6K1W5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02223"},{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"}],"genes_by_uniquename":{"HGNC:15486":null,"SJAG_02228":null,"SPBC24C6.10c":null,"YDL146W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SPIN90/Ldb17, leucine-rich domain","id":"PF09431","interpro_description":"SPIN90/Ldb17, leucine-rich domain","interpro_id":"IPR018556","interpro_name":"SPIN90/Ldb17_LRD","locations":[{"end":332,"start":195}],"match_end":332,"match_start":195,"name":"SPIN90_LRD"},{"dbname":"PANTHER","id":"PTHR13357","interpro_description":"SPIN90/Ldb17","interpro_id":"IPR030125","interpro_name":"SPIN90/Ldb17","locations":[{"end":371,"start":4}],"match_end":371,"match_start":4,"name":"SH3 ADAPTER PROTEIN SPIN90  NCK INTERACTING PROTEIN WITH SH3 DOMAIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":282363,"start_pos":281140,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":280,"start":258}}],"name":"dip1","ortholog_annotations":[{"gene_uniquename":"SJAG_02228","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15486","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02228","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02228","ortholog_taxonid":4932,"ortholog_uniquename":"YDL146W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02228","ortholog_taxonid":4932,"ortholog_uniquename":"YDL146W","reference_uniquename":"PMID:26896847"}],"product":"WISH/DIP/SPIN90 ortholog, endocytosis protein Dip1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0071933"]}},"subset_termids":["GO:0015629","GO:0016192","GO:0030036","GO:0005938","GO:0030479"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000147":null,"GO:0006897":null,"GO:0030479":null,"GO:0032153":null,"GO:0034314":null,"GO:0043332":null,"GO:0044379":null,"GO:0051666":null,"GO:0071933":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02228.1"],"transcripts_by_uniquename":{"SJAG_02228.1":null},"uniprot_identifier":"B6K1W5","uniquename":"SJAG_02228"}


id: SJAG_02229
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107542],"is_not":false,"summary":null,"term":"GO:0033617"}],"cellular_component":[{"annotations":[107541],"is_not":false,"summary":null,"term":"GO:0005758"}],"mondo":[{"annotations":[85452],"is_not":false,"summary":null,"term":"MONDO:0014668"}]},"dbxrefs":["InterPro:IPR036549","UniProtKB/TrEMBL:B6K1W6","EnsemblGenomes-Gn:SJAG_02229","InterPro:IPR003213","EnsemblGenomes-Tr:EEB07147","GOA:B6K1W6"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":30,"start":1}},{"range":{"end":113,"start":94}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps3001","uniquename":"SJAG_02224"},{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"}],"genes_by_uniquename":{"HGNC:18025":null,"SJAG_02229":null,"SPBC24C6.13":null,"YMR244C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytochrome oxidase c subunit VIb","id":"PF02297","interpro_description":"Cytochrome oxidase c subunit VIb-like","interpro_id":"IPR048280","interpro_name":"COX6B-like","locations":[{"end":93,"start":24}],"match_end":93,"match_start":24,"name":"COX6B"},{"dbname":"PROSITE_PROFILES","description":"Coiled coil-helix-coiled coil-helix (CHCH) domain profile.","id":"PS51808","locations":[{"end":83,"start":31}],"match_end":83,"match_start":31,"name":"CHCH"},{"dbname":"SUPERFAMILY","id":"SSF47694","interpro_description":"Cytochrome c oxidase subunit 6B/Cytochrome c oxidase assembly factor 6-like superfamily","interpro_id":"IPR036549","interpro_name":"CX6/COA6-like_sf","locations":[{"end":83,"start":17}],"match_end":83,"match_start":17,"name":"Cytochrome c oxidase subunit h"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.140","interpro_description":"Cytochrome c oxidase subunit 6B/Cytochrome c oxidase assembly factor 6-like superfamily","interpro_id":"IPR036549","interpro_name":"CX6/COA6-like_sf","locations":[{"end":96,"start":1}],"match_end":96,"match_start":1,"name":"Cytochrome c oxidase, subunit VIb"},{"dbname":"PANTHER","id":"PTHR47677","interpro_description":"Cytochrome c oxidase assembly factor 6, fungal","interpro_id":"IPR048281","interpro_name":"COA6_fun","locations":[{"end":99,"start":23}],"match_end":99,"match_start":23,"name":"CYTOCHROME C OXIDASE ASSEMBLY FACTOR 6"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":30,"start":1},{"end":113,"start":94}],"match_end":113,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":283101,"start_pos":282653,"strand":"reverse"},"name":"coa6","ortholog_annotations":[{"gene_uniquename":"SJAG_02229","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18025","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02229","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.13","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02229","ortholog_taxonid":4932,"ortholog_uniquename":"YMR244C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02229","ortholog_taxonid":4932,"ortholog_uniquename":"YMR244C-A","reference_uniquename":"PMID:26896847"}],"product":"cytochrome c oxidase assembly protein Coa6","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005739","MONDO:0005066","MONDO:0004069","MONDO:0005267","MONDO:0005336","GO:0007005","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005758":null,"GO:0033617":null,"MONDO:0014668":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02229.1"],"transcripts_by_uniquename":{"SJAG_02229.1":null},"uniprot_identifier":"B6K1W6","uniquename":"SJAG_02229"}


id: SJAG_02230
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[107523],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107524],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[61988],"is_not":false,"summary":null,"term":"GO:0016832"}]},"dbxrefs":["InterPro:IPR029061","EnsemblGenomes-Gn:SJAG_02230","EnsemblGenomes-Tr:EEB07148","InterPro:IPR009014","GOA:B6K1W7","InterPro:IPR018969","InterPro:IPR018970","UniProtKB/TrEMBL:B6K1W7","InterPro:IPR005593","InterPro:IPR019790","InterPro:IPR019789"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"abz2","uniquename":"SJAG_02225"},{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"}],"genes_by_uniquename":{"SJAG_02230":null,"SPBC24C6.09c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"XFP C-terminal domain","id":"PF09363","interpro_description":"Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal","interpro_id":"IPR018969","interpro_name":"Xul5P/Fru6P_PKetolase_C","locations":[{"end":812,"start":612}],"match_end":812,"match_start":612,"name":"XFP_C"},{"dbname":"PFAM","description":"D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase","id":"PF03894","interpro_description":"Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase","interpro_id":"IPR005593","interpro_name":"Xul5P/Fru6P_PKetolase","locations":[{"end":601,"start":432}],"match_end":601,"match_start":432,"name":"XFP"},{"dbname":"PFAM","description":"XFP N-terminal domain","id":"PF09364","interpro_description":"Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal","interpro_id":"IPR018970","interpro_name":"Xul5P/Fru6P_PKetolase_N","locations":[{"end":406,"start":46}],"match_end":406,"match_start":46,"name":"XFP_N"},{"dbname":"PROSITE_PATTERNS","description":"Phosphoketolase signature 2.","id":"PS60003","interpro_description":"Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site","interpro_id":"IPR019789","interpro_name":"Xul5P/Fru6P_PKetolase_ThDP_BS","locations":[{"end":212,"start":194}],"match_end":212,"match_start":194,"name":"PHOSPHOKETOLASE_2"},{"dbname":"PROSITE_PATTERNS","description":"Phosphoketolase signature 1.","id":"PS60002","interpro_description":"Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site","interpro_id":"IPR019790","interpro_name":"Xul5P/Fru6P_PKetolase_CS","locations":[{"end":187,"start":181}],"match_end":187,"match_start":181,"name":"PHOSPHOKETOLASE_1"},{"dbname":"SUPERFAMILY","id":"SSF52922","interpro_description":"Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II","interpro_id":"IPR009014","interpro_name":"Transketo_C/PFOR_II","locations":[{"end":764,"start":623}],"match_end":764,"match_start":623,"name":"TK C-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52518","interpro_description":"Thiamin diphosphate-binding fold","interpro_id":"IPR029061","interpro_name":"THDP-binding","locations":[{"end":380,"start":46},{"end":617,"start":425}],"match_end":617,"match_start":46,"name":"Thiamin diphosphate-binding fold (THDP-binding)"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.920","interpro_description":"Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II","interpro_id":"IPR009014","interpro_name":"Transketo_C/PFOR_II","locations":[{"end":818,"start":632}],"match_end":818,"match_start":632},{"dbname":"GENE3D","id":"G3DSA:3.40.50.970","locations":[{"end":631,"start":32}],"match_end":631,"match_start":32},{"dbname":"PANTHER","id":"PTHR31273","interpro_description":"Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase","interpro_id":"IPR005593","interpro_name":"Xul5P/Fru6P_PKetolase","locations":[{"end":813,"start":20}],"match_end":813,"match_start":20,"name":"PHOSPHOKETOLASE-RELATED"},{"dbname":"PIRSF","id":"PIRSF017245","interpro_description":"Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase","interpro_id":"IPR005593","interpro_name":"Xul5P/Fru6P_PKetolase","locations":[{"end":812,"start":19}],"match_end":812,"match_start":19,"name":"Phosphoketolase"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":19,"start":1}],"match_end":19,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":286440,"start_pos":283972,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_02230","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.09c","reference_uniquename":"PMID:21511999"}],"product":"phosphoketolase family protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016832"]}},"subset_termids":["GO:0005634","GO:0005829","GO:0016829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016832":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02230.1"],"transcripts_by_uniquename":{"SJAG_02230.1":null},"uniprot_identifier":"B6K1W7","uniquename":"SJAG_02230"}


id: SJAG_02231
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107520],"is_not":false,"summary":null,"term":"GO:1904262"},{"annotations":[77159],"is_not":false,"summary":null,"term":"GO:1904263"}],"cellular_component":[{"annotations":[77158],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107517],"is_not":false,"summary":null,"term":"GO:1990877"},{"annotations":[107518],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[107519],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[77157],"is_not":false,"summary":null,"term":"GO:0005096"}],"mondo":[{"annotations":[87446],"is_not":false,"summary":null,"term":"MONDO:0800445"},{"annotations":[86846],"is_not":false,"summary":null,"term":"MONDO:0005575"},{"annotations":[85378],"is_not":false,"summary":null,"term":"MONDO:0008259"},{"annotations":[87140],"is_not":false,"summary":null,"term":"MONDO:0007763"},{"annotations":[85916],"is_not":false,"summary":null,"term":"MONDO:0012574"}]},"dbxrefs":["InterPro:IPR021713","EnsemblGenomes-Gn:SJAG_02231","EnsemblGenomes-Tr:EEB07149","InterPro:IPR037520","InterPro:IPR037521","UniProtKB/TrEMBL:B6K1W8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":72,"start":37}},{"range":{"end":147,"start":103}},{"range":{"end":375,"start":311}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"msh2","uniquename":"SJAG_02226"},{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"}],"genes_by_uniquename":{"HGNC:27310":null,"SJAG_02231":null,"SPBC24C6.08c":null,"YGR057C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Vesicle coat protein involved in Golgi to plasma membrane transport","id":"PF11704","interpro_description":"Folliculin/SMCR8, longin domain","interpro_id":"IPR037520","interpro_name":"Folliculin/SMCR8_longin","locations":[{"end":423,"start":201}],"match_end":423,"match_start":201,"name":"Folliculin"},{"dbname":"PROSITE_PROFILES","description":"Tripartite DENN FLCN/SMCR8-type domain profile.","id":"PS51834","interpro_description":"Folliculin/SMCR8, tripartite DENN domain","interpro_id":"IPR037521","interpro_name":"FLCN/SMCR8_DENN","locations":[{"end":424,"start":161}],"match_end":424,"match_start":161,"name":"DENN_FLCN_SMCR8"},{"dbname":"PANTHER","id":"PTHR31441","interpro_description":"Folliculin","interpro_id":"IPR021713","interpro_name":"Folliculin","locations":[{"end":424,"start":1}],"match_end":424,"match_start":1,"name":"FOLLICULIN FAMILY MEMBER"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":72,"start":37},{"end":147,"start":103},{"end":375,"start":311}],"match_end":375,"match_start":37,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":336,"start":323}],"match_end":336,"match_start":323,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":72,"start":53}],"match_end":72,"match_start":53,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":288616,"start_pos":287342,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":134,"start":125}},{"range":{"end":171,"start":159}},{"range":{"end":335,"start":322}}],"name":"bhd1","ortholog_annotations":[{"gene_uniquename":"SJAG_02231","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:27310","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02231","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02231","ortholog_taxonid":4932,"ortholog_uniquename":"YGR057C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02231","ortholog_taxonid":4932,"ortholog_uniquename":"YGR057C","reference_uniquename":"PMID:26896847"}],"product":"folliculin, BFC/FNIP-Folliculin complex subunit Bhd1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005096"]}},"subset_termids":["GO:0005829","MONDO:0004335","GO:0030234","MONDO:0004992","GO:0098772","GO:0005634","MONDO:0005240","GO:0005773","GO:0023052","MONDO:0000426"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005096":null,"GO:0005634":null,"GO:0005829":null,"GO:1904262":null,"GO:1904263":null,"GO:1990877":null,"MONDO:0005575":null,"MONDO:0007763":null,"MONDO:0008259":null,"MONDO:0012574":null,"MONDO:0800445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02231.1"],"transcripts_by_uniquename":{"SJAG_02231.1":null},"uniprot_identifier":"B6K1W8","uniquename":"SJAG_02231"}


id: SJAG_02232
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107513],"is_not":false,"summary":null,"term":"GO:1902412"},{"annotations":[107514],"is_not":false,"summary":null,"term":"GO:0031028"}],"cellular_component":[{"annotations":[107512],"is_not":false,"summary":null,"term":"GO:0071958"}],"molecular_function":[{"annotations":[107515],"is_not":false,"summary":null,"term":"GO:0030295"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1W9","GOA:B6K1W9","InterPro:IPR012535","EnsemblGenomes-Tr:EEB07150","EnsemblGenomes-Gn:SJAG_02232"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf14","uniquename":"SJAG_02227"},{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"}],"genes_by_uniquename":{"SJAG_02232":null,"SPBC24C6.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cell division control protein 14, SIN component","id":"PF08045","interpro_description":"Cell division protein Cdc14","interpro_id":"IPR012535","interpro_name":"Cell_div_Cdc14","locations":[{"end":199,"start":47}],"match_end":199,"match_start":47,"name":"CDC14"},{"dbname":"PANTHER","id":"PTHR34065","interpro_description":"Cell division protein Cdc14","interpro_id":"IPR012535","interpro_name":"Cell_div_Cdc14","locations":[{"end":234,"start":2}],"match_end":234,"match_start":2,"name":"CELL DIVISION CONTROL PROTEIN 14"}],"location":{"chromosome_name":"supercont5.1","end_pos":289678,"start_pos":288950,"strand":"reverse"},"name":"cdc14","ortholog_annotations":[{"gene_uniquename":"SJAG_02232","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.07","reference_uniquename":"PMID:21511999"}],"product":"SIN component Cdc14","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0030295"]}},"subset_termids":["GO:0000281","GO:0023052","GO:0030234","GO:0015630","GO:0098772","GO:0005816"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0030295":null,"GO:0031028":null,"GO:0071958":null,"GO:1902412":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02232.1"],"transcripts_by_uniquename":{"SJAG_02232.1":null},"uniprot_identifier":"B6K1W9","uniquename":"SJAG_02232"}


id: SJAG_02233
data:
  {"cv_annotations":{"biological_process":[{"annotations":[62372],"is_not":false,"summary":null,"term":"GO:0007186"},{"annotations":[107508],"is_not":false,"summary":null,"term":"GO:0180040"},{"annotations":[107509],"is_not":false,"summary":null,"term":"GO:0031139"}],"cellular_component":[{"annotations":[107502],"is_not":false,"summary":null,"term":"GO:0090726"},{"annotations":[107503],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74656],"is_not":false,"summary":null,"term":"GO:0005834"}],"molecular_function":[{"annotations":[74654],"is_not":false,"summary":null,"term":"GO:0001664"},{"annotations":[62367],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[74655],"is_not":false,"summary":null,"term":"GO:0003924"}],"mondo":[{"annotations":[86198],"is_not":false,"summary":null,"term":"MONDO:0014199"},{"annotations":[87080],"is_not":false,"summary":null,"term":"MONDO:0060491"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07151","InterPro:IPR001019","UniProtKB/TrEMBL:B6K1X0","EnsemblGenomes-Gn:SJAG_02233","GOA:B6K1X0","InterPro:IPR011025","InterPro:IPR002975","InterPro:IPR027417"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":49,"start":14}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dip1","uniquename":"SJAG_02228"},{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"}],"genes_by_uniquename":{"HGNC:4389":null,"SJAG_02233":null,"SPBC24C6.06":null,"YHR005C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"G-protein alpha subunit","id":"PF00503","interpro_description":"Guanine nucleotide binding protein (G-protein), alpha subunit","interpro_id":"IPR001019","interpro_name":"Gprotein_alpha_su","locations":[{"end":380,"start":53}],"match_end":380,"match_start":53,"name":"G-alpha"},{"dbname":"CDD","description":"G-alpha","id":"cd00066","interpro_description":"Guanine nucleotide binding protein (G-protein), alpha subunit","interpro_id":"IPR001019","interpro_name":"Gprotein_alpha_su","locations":[{"end":385,"start":58}],"match_end":385,"match_start":58,"name":"G-alpha"},{"dbname":"PROSITE_PROFILES","description":"G-alpha domain profile.","id":"PS51882","interpro_description":"Guanine nucleotide binding protein (G-protein), alpha subunit","interpro_id":"IPR001019","interpro_name":"Gprotein_alpha_su","locations":[{"end":390,"start":56}],"match_end":390,"match_start":56,"name":"G_ALPHA"},{"dbname":"SMART","id":"SM00275","interpro_description":"Guanine nucleotide binding protein (G-protein), alpha subunit","interpro_id":"IPR001019","interpro_name":"Gprotein_alpha_su","locations":[{"end":390,"start":5}],"match_end":390,"match_start":5,"name":"galpha_1"},{"dbname":"PRINTS","description":"Alpha G protein (transducin) signature","id":"PR00318","interpro_description":"Guanine nucleotide binding protein (G-protein), alpha subunit","interpro_id":"IPR001019","interpro_name":"Gprotein_alpha_su","locations":[{"end":74,"start":59},{"end":212,"start":190},{"end":236,"start":219},{"end":269,"start":241},{"end":296,"start":287}],"match_end":296,"match_start":59,"name":"GPROTEINA"},{"dbname":"PRINTS","description":"Fungal G protein alpha subunit signature","id":"PR01241","interpro_description":"Fungal G-protein, alpha subunit","interpro_id":"IPR002975","interpro_name":"Fungi_Gprotein_alpha","locations":[{"end":95,"start":83},{"end":218,"start":208},{"end":310,"start":298},{"end":351,"start":340},{"end":377,"start":367}],"match_end":377,"match_start":83,"name":"GPROTEINAFNG"},{"dbname":"FUNFAM","description":"Guanine nucleotide-binding protein subunit alpha","id":"G3DSA:3.40.50.300:FF:000051","locations":[{"end":379,"start":194}],"match_end":379,"match_start":194},{"dbname":"SUPERFAMILY","id":"SSF47895","interpro_description":"G protein alpha subunit, helical insertion","interpro_id":"IPR011025","interpro_name":"GproteinA_insert","locations":[{"end":204,"start":85}],"match_end":204,"match_start":85,"name":"Transducin (alpha subunit), insertion domain"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":81,"start":56},{"end":386,"start":197}],"match_end":386,"match_start":56,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":85,"start":59},{"end":379,"start":204}],"match_end":379,"match_start":59},{"dbname":"GENE3D","id":"G3DSA:1.10.400.10","interpro_description":"G protein alpha subunit, helical insertion","interpro_id":"IPR011025","interpro_name":"GproteinA_insert","locations":[{"end":203,"start":86}],"match_end":203,"match_start":86},{"dbname":"PANTHER","id":"PTHR10218","interpro_description":"Guanine nucleotide binding protein (G-protein), alpha subunit","interpro_id":"IPR001019","interpro_name":"Gprotein_alpha_su","locations":[{"end":387,"start":27}],"match_end":387,"match_start":27,"name":"GTP-BINDING PROTEIN ALPHA SUBUNIT"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":49,"start":14}],"match_end":49,"match_start":14,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":48,"start":34}],"match_end":48,"match_start":34,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":27,"start":14}],"match_end":27,"match_start":14,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":291727,"start_pos":290555,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":48,"start":33}},{"range":{"end":108,"start":97}}],"name":"gpa1","ortholog_annotations":[{"gene_uniquename":"SJAG_02233","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4389","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02233","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02233","ortholog_taxonid":4932,"ortholog_uniquename":"YHR005C","reference_uniquename":"PMID:29761456"}],"product":"G-protein alpha subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525","GO:0001664"],"not-binding":["GO:0003924"]}},"subset_termids":["GO:0023052","GO:0005938","MONDO:0700092","GO:0005829","MONDO:0005027","GO:0000747","GO:0005886","GO:0003924"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001664":null,"GO:0003924":null,"GO:0005525":null,"GO:0005829":null,"GO:0005834":null,"GO:0007186":null,"GO:0031139":null,"GO:0090726":null,"GO:0180040":null,"MONDO:0014199":null,"MONDO:0060491":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02233.1"],"transcripts_by_uniquename":{"SJAG_02233.1":null},"uniprot_identifier":"B6K1X0","uniquename":"SJAG_02233"}


id: SJAG_02234
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107496],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[107497],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[107498],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[107499],"is_not":false,"summary":null,"term":"GO:0032511"},{"annotations":[67326],"is_not":false,"summary":null,"term":"GO:0006890"}],"cellular_component":[{"annotations":[107493],"is_not":false,"summary":null,"term":"GO:0030126"},{"annotations":[107495],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[67325],"is_not":false,"summary":null,"term":"GO:0005198"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1X1","EnsemblGenomes-Gn:SJAG_02234","InterPro:IPR006822","GOA:B6K1X1","EnsemblGenomes-Tr:EEB07152","InterPro:IPR011990"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"coa6","uniquename":"SJAG_02229"},{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"}],"genes_by_uniquename":{"HGNC:2234":null,"SJAG_02234":null,"SPBC24C6.05":null,"YIL076W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Coatomer epsilon subunit","id":"PF04733","locations":[{"end":274,"start":10}],"match_end":274,"match_start":10,"name":"Coatomer_E"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":282,"start":4}],"match_end":282,"match_start":4,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR10805","interpro_description":"Coatomer, epsilon subunit","interpro_id":"IPR006822","interpro_name":"Coatomer_esu","locations":[{"end":261,"start":10}],"match_end":261,"match_start":10,"name":"COATOMER SUBUNIT EPSILON"}],"location":{"chromosome_name":"supercont5.1","end_pos":293766,"start_pos":292866,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":195,"start":189}},{"range":{"end":243,"start":230}}],"name":"sec28","ortholog_annotations":[{"gene_uniquename":"SJAG_02234","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2234","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02234","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02234","ortholog_taxonid":4932,"ortholog_uniquename":"YIL076W","reference_uniquename":"PMID:29761456"}],"product":"coatomer epsilon subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005198"]}},"subset_termids":["GO:0031410","GO:0016192","GO:0005829","GO:0005198","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005198":null,"GO:0005829":null,"GO:0006886":null,"GO:0006888":null,"GO:0006890":null,"GO:0006891":null,"GO:0030126":null,"GO:0032511":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02234.1"],"transcripts_by_uniquename":{"SJAG_02234.1":null},"uniprot_identifier":"B6K1X1","uniquename":"SJAG_02234"}


id: SJAG_02235
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":298,"start":298}}],"cv_annotations":{"biological_process":[{"annotations":[78384],"is_not":false,"summary":null,"term":"GO:0010133"}],"cellular_component":[{"annotations":[107489],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[78382],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[78383],"is_not":false,"summary":null,"term":"GO:0003842"}],"mondo":[{"annotations":[87056],"is_not":false,"summary":null,"term":"MONDO:0009401"}]},"dbxrefs":["InterPro:IPR005931","InterPro:IPR016160","InterPro:IPR029510","InterPro:IPR016161","EnsemblGenomes-Gn:SJAG_02235","EnsemblGenomes-Tr:EEB07153","GOA:B6K1X2","InterPro:IPR016162","InterPro:IPR016163","UniProtKB/TrEMBL:B6K1X2","InterPro:IPR015590"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02230"},{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"}],"genes_by_uniquename":{"HGNC:406":null,"SJAG_02235":null,"SPBC24C6.04":null,"YHR037W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aldehyde dehydrogenase family","id":"PF00171","interpro_description":"Aldehyde dehydrogenase domain","interpro_id":"IPR015590","interpro_name":"Aldehyde_DH_dom","locations":[{"end":520,"start":60}],"match_end":520,"match_start":60,"name":"Aldedh"},{"dbname":"CDD","description":"ALDH_F4-17_P5CDH","id":"cd07123","interpro_description":"Delta-1-pyrroline-5-carboxylate dehydrogenase","interpro_id":"IPR005931","interpro_name":"P5CDH/ALDH4A1","locations":[{"end":536,"start":12}],"match_end":536,"match_start":12,"name":"ALDH_F4-17_P5CDH"},{"dbname":"PROSITE_PATTERNS","description":"Aldehyde dehydrogenases cysteine active site.","id":"PS00070","interpro_description":"Aldehyde dehydrogenase, cysteine active site","interpro_id":"IPR016160","interpro_name":"Ald_DH_CS_CYS","locations":[{"end":336,"start":325}],"match_end":336,"match_start":325,"name":"ALDEHYDE_DEHYDR_CYS"},{"dbname":"PROSITE_PATTERNS","description":"Aldehyde dehydrogenases glutamic acid active site.","id":"PS00687","interpro_description":"Aldehyde dehydrogenase, glutamic acid active site","interpro_id":"IPR029510","interpro_name":"Ald_DH_CS_GLU","locations":[{"end":304,"start":297}],"match_end":304,"match_start":297,"name":"ALDEHYDE_DEHYDR_GLU"},{"dbname":"FUNFAM","description":"1-pyrroline-5-carboxylate dehydrogenase","id":"G3DSA:3.40.605.10:FF:000006","locations":[{"end":309,"start":15}],"match_end":309,"match_start":15},{"dbname":"FUNFAM","description":"1-pyrroline-5-carboxylate dehydrogenase 1","id":"G3DSA:3.40.309.10:FF:000005","locations":[{"end":499,"start":300}],"match_end":499,"match_start":300},{"dbname":"SUPERFAMILY","id":"SSF53720","interpro_description":"Aldehyde/histidinol dehydrogenase","interpro_id":"IPR016161","interpro_name":"Ald_DH/histidinol_DH","locations":[{"end":532,"start":11}],"match_end":532,"match_start":11,"name":"ALDH-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.605.10","interpro_description":"Aldehyde dehydrogenase, N-terminal","interpro_id":"IPR016162","interpro_name":"Ald_DH_N","locations":[{"end":299,"start":18},{"end":533,"start":500}],"match_end":533,"match_start":18,"name":"Aldehyde Dehydrogenase; Chain A, domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.40.309.10","interpro_description":"Aldehyde dehydrogenase, C-terminal","interpro_id":"IPR016163","interpro_name":"Ald_DH_C","locations":[{"end":499,"start":300}],"match_end":499,"match_start":300,"name":"Aldehyde Dehydrogenase; Chain A, domain 2"},{"dbname":"PANTHER","id":"PTHR42862","interpro_description":"Proline metabolism enzyme","interpro_id":"IPR050485","interpro_name":"Proline_metab_enzyme","locations":[{"end":547,"start":10}],"match_end":547,"match_start":10,"name":"DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED"},{"dbname":"NCBIFAM","description":"L-glutamate gamma-semialdehyde dehydrogenase","id":"TIGR01236","interpro_description":"Delta-1-pyrroline-5-carboxylate dehydrogenase","interpro_id":"IPR005931","interpro_name":"P5CDH/ALDH4A1","locations":[{"end":547,"start":13}],"match_end":547,"match_start":13,"name":"D1pyr5carbox1"}],"location":{"chromosome_name":"supercont5.1","end_pos":296322,"start_pos":294673,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":40,"start":27}}],"name":"put2","ortholog_annotations":[{"gene_uniquename":"SJAG_02235","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:406","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02235","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02235","ortholog_taxonid":4932,"ortholog_uniquename":"YHR037W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02235","ortholog_taxonid":4932,"ortholog_uniquename":"YHR037W","reference_uniquename":"PMID:26896847"}],"product":"delta-1-pyrroline-5-carboxylate dehydrogenase Put2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003842"]}},"subset_termids":["GO:0006520","GO:0005739","MONDO:0005066","MONDO:0004736","GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003842":null,"GO:0005759":null,"GO:0005829":null,"GO:0010133":null,"MONDO:0009401":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02235.1"],"transcripts_by_uniquename":{"SJAG_02235.1":null},"uniprot_identifier":"B6K1X2","uniquename":"SJAG_02235"}


id: SJAG_02236
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107486],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[107484],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[66254],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[77688],"is_not":false,"summary":null,"term":"GO:0004827"}],"mondo":[{"annotations":[87489],"is_not":false,"summary":null,"term":"MONDO:0032752"}]},"dbxrefs":["GOA:B6K1X3","EnsemblGenomes-Tr:EEB07154","InterPro:IPR002316","EnsemblGenomes-Gn:SJAG_02236","InterPro:IPR002314","InterPro:IPR033730","InterPro:IPR006195","UniProtKB/TrEMBL:B6K1X3","InterPro:IPR036621","InterPro:IPR004154"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bhd1","uniquename":"SJAG_02231"},{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"}],"genes_by_uniquename":{"HGNC:30563":null,"SJAG_02236":null,"SPBC24C6.03":null,"YER087W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Anticodon binding domain","id":"PF03129","interpro_description":"Anticodon-binding","interpro_id":"IPR004154","interpro_name":"Anticodon-bd","locations":[{"end":414,"start":324}],"match_end":414,"match_start":324,"name":"HGTP_anticodon"},{"dbname":"PFAM","description":"tRNA synthetase class II core domain (G, H, P, S and T)","id":"PF00587","interpro_description":"Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)","interpro_id":"IPR002314","interpro_name":"aa-tRNA-synt_IIb","locations":[{"end":303,"start":102}],"match_end":303,"match_start":102,"name":"tRNA-synt_2b"},{"dbname":"CDD","description":"ProRS_core_prok","id":"cd00779","interpro_description":"Prokaryote proline-tRNA ligase core domain","interpro_id":"IPR033730","interpro_name":"ProRS_core_prok","locations":[{"end":305,"start":30}],"match_end":305,"match_start":30,"name":"ProRS_core_prok"},{"dbname":"PROSITE_PROFILES","description":"Aminoacyl-transfer RNA synthetases class-II family profile.","id":"PS50862","interpro_description":"Aminoacyl-tRNA synthetase, class II","interpro_id":"IPR006195","interpro_name":"aa-tRNA-synth_II","locations":[{"end":316,"start":38}],"match_end":316,"match_start":38,"name":"AA_TRNA_LIGASE_II"},{"dbname":"PRINTS","description":"Prolyl-tRNA synthetase signature","id":"PR01046","interpro_description":"Proline-tRNA ligase, class IIa","interpro_id":"IPR002316","interpro_name":"Pro-tRNA-ligase_IIa","locations":[{"end":91,"start":73},{"end":120,"start":109},{"end":147,"start":139},{"end":160,"start":149}],"match_end":160,"match_start":73,"name":"TRNASYNTHPRO"},{"dbname":"SUPERFAMILY","id":"SSF52954","locations":[{"end":414,"start":311}],"match_end":414,"match_start":311,"name":"Class II aaRS ABD-related"},{"dbname":"SUPERFAMILY","id":"SSF55681","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":326,"start":31}],"match_end":326,"match_start":31,"name":"Class II aaRS and biotin synthetases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.800","interpro_description":"Anticodon-binding domain superfamily","interpro_id":"IPR036621","interpro_name":"Anticodon-bd_dom_sf","locations":[{"end":416,"start":310}],"match_end":416,"match_start":310},{"dbname":"GENE3D","id":"G3DSA:3.30.930.10","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":309,"start":5}],"match_end":309,"match_start":5,"name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"PANTHER","id":"PTHR42753","interpro_description":"Proline-tRNA synthetase","interpro_id":"IPR050062","interpro_name":"Pro-tRNA_synthetase","locations":[{"end":412,"start":23}],"match_end":412,"match_start":23,"name":"MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.1","end_pos":298800,"start_pos":297544,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_02236","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30563","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02236","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC24C6.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02236","ortholog_taxonid":4932,"ortholog_uniquename":"YER087W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02236","ortholog_taxonid":4932,"ortholog_uniquename":"YER087W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial proline-tRNA ligase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004827"]}},"subset_termids":["GO:0140101","GO:0016874","GO:0140098","GO:0140053","MONDO:0005027","GO:0005739","MONDO:0700092"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004827":null,"GO:0005524":null,"GO:0005759":null,"GO:0032543":null,"MONDO:0032752":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02236.1"],"transcripts_by_uniquename":{"SJAG_02236.1":null},"uniprot_identifier":"B6K1X3","uniquename":"SJAG_02236"}


id: SJAG_02237
data:
  {"coiled_coil_coords":[{"range":{"end":157,"start":126}}],"cv_annotations":{"biological_process":[{"annotations":[100304],"is_not":false,"summary":null,"term":"GO:0006303"}],"cellular_component":[{"annotations":[100299],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[100301],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100302],"is_not":false,"summary":null,"term":"GO:0032807"}],"mondo":[{"annotations":[85467],"is_not":false,"summary":null,"term":"MONDO:0014686"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07155","EnsemblGenomes-Gn:SJAG_02237","UniProtKB/TrEMBL:B6K1X4"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":231,"start":179}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc14","uniquename":"SJAG_02232"},{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"}],"genes_by_uniquename":{"HGNC:12831":null,"SJAG_02237":null,"SPAC6G9.16c":null,"YGL090W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":157,"start":126}],"match_end":157,"match_start":126,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":231,"start":179}],"match_end":231,"match_start":179,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":208,"start":199},{"end":231,"start":221}],"match_end":231,"match_start":199,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":194,"start":180}],"match_end":194,"match_start":180,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":220,"start":209}],"match_end":220,"match_start":209,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":300046,"start_pos":299148,"strand":"forward"},"name":"xrc4","ortholog_annotations":[{"gene_uniquename":"SJAG_02237","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12831","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02237","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02237","ortholog_taxonid":4932,"ortholog_uniquename":"YGL090W","reference_uniquename":"PMID:29761456"}],"product":"XRCC4 nonhomologous end joining factor Xrc4","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0006281","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005829":null,"GO:0006303":null,"GO:0032807":null,"MONDO:0014686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02237.1"],"transcripts_by_uniquename":{"SJAG_02237.1":null},"uniprot_identifier":"B6K1X4","uniquename":"SJAG_02237"}


id: SJAG_02238
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100297],"is_not":false,"summary":null,"term":"GO:0006368"}],"cellular_component":[{"annotations":[100296],"is_not":false,"summary":null,"term":"GO:0032783"}],"molecular_function":[{"annotations":[100298],"is_not":false,"summary":null,"term":"GO:0003711"}],"mondo":[{"annotations":[85650],"is_not":false,"summary":null,"term":"MONDO:0014609"},{"annotations":[85409],"is_not":false,"summary":null,"term":"MONDO:0010659"},{"annotations":[86945],"is_not":false,"summary":null,"term":"MONDO:0851095"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02238","EnsemblGenomes-Tr:EEB07156","UniProtKB/TrEMBL:B6K1X5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":281,"start":18}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gpa1","uniquename":"SJAG_02233"},{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"}],"genes_by_uniquename":{"HGNC:17869":null,"HGNC:3776":null,"HGNC:6473":null,"HGNC:7135":null,"SJAG_02238":null,"SPAC6G9.15c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ell binding protein Ebp1, C-terminal","id":"PF21204","interpro_description":"Ell binding protein Ebp1, C-terminal","interpro_id":"IPR049403","interpro_name":"Ebp1_C","locations":[{"end":488,"start":235}],"match_end":488,"match_start":235,"name":"Ebp1_C"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":281,"start":18}],"match_end":281,"match_start":18,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":103,"start":92},{"end":279,"start":263}],"match_end":279,"match_start":92,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":91,"start":79},{"end":141,"start":126},{"end":167,"start":157},{"end":204,"start":190}],"match_end":204,"match_start":79,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":302003,"start_pos":300474,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":102,"start":91}},{"range":{"end":217,"start":204}},{"range":{"end":278,"start":262}}],"name":"ebp1","ortholog_annotations":[{"gene_uniquename":"SJAG_02238","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17869","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02238","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3776","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02238","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6473","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02238","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7135","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02238","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.15c","reference_uniquename":"PMID:21511999"}],"product":"Ell binding protein Ebp1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003711"]}},"subset_termids":["MONDO:0000426","GO:0005634","GO:0006351","GO:0005654","GO:0003711"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003711":null,"GO:0006368":null,"GO:0032783":null,"MONDO:0010659":null,"MONDO:0014609":null,"MONDO:0851095":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02238.1"],"transcripts_by_uniquename":{"SJAG_02238.1":null},"uniprot_identifier":"B6K1X5","uniquename":"SJAG_02238"}


id: SJAG_02239
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100293],"is_not":false,"summary":null,"term":"GO:0000288"}],"cellular_component":[{"annotations":[100290],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[100291],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100292],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[74364],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07157","EnsemblGenomes-Gn:SJAG_02239","InterPro:IPR033133","InterPro:IPR011989","InterPro:IPR016024","InterPro:IPR033712","GOA:B6K1X6","UniProtKB/TrEMBL:B6K1X6","InterPro:IPR001313"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec28","uniquename":"SJAG_02234"},{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"}],"genes_by_uniquename":{"SJAG_02239":null,"SPAC6G9.14":null,"YGL014W":null,"YGL178W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pumilio-family RNA binding repeat","id":"PF00806","interpro_description":"Pumilio RNA-binding repeat","interpro_id":"IPR001313","interpro_name":"Pumilio_RNA-bd_rpt","locations":[{"end":246,"start":216},{"end":285,"start":255},{"end":319,"start":290},{"end":359,"start":325},{"end":395,"start":361},{"end":416,"start":399},{"end":467,"start":436},{"end":504,"start":475}],"match_end":504,"match_start":216,"name":"PUF"},{"dbname":"CDD","description":"Pumilio","id":"cd07920","interpro_description":"Pumilio, RNA binding domain","interpro_id":"IPR033712","interpro_name":"Pumilio_RNA-bd","locations":[{"end":524,"start":207}],"match_end":524,"match_start":207,"name":"Pumilio"},{"dbname":"PROSITE_PROFILES","description":"Pumilio RNA-binding repeat profile.","id":"PS50302","interpro_description":"Pumilio RNA-binding repeat","interpro_id":"IPR001313","interpro_name":"Pumilio_RNA-bd_rpt","locations":[{"end":247,"start":211},{"end":502,"start":283}],"match_end":502,"match_start":211,"name":"PUM"},{"dbname":"PROSITE_PROFILES","description":"Pumilio homology domain (PUM-HD) profile.","id":"PS50303","interpro_description":"Pumilio homology domain","interpro_id":"IPR033133","interpro_name":"PUM-HD","locations":[{"end":528,"start":188}],"match_end":528,"match_start":188,"name":"PUM_HD"},{"dbname":"SMART","id":"SM00025","interpro_description":"Pumilio RNA-binding repeat","interpro_id":"IPR001313","interpro_name":"Pumilio_RNA-bd_rpt","locations":[{"end":464,"start":212},{"end":502,"start":467}],"match_end":502,"match_start":212,"name":"pum_5"},{"dbname":"FUNFAM","description":"Pumilio homolog 9","id":"G3DSA:1.25.10.10:FF:000237","locations":[{"end":528,"start":206}],"match_end":528,"match_start":206},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":525,"start":212}],"match_end":525,"match_start":212,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":531,"start":207}],"match_end":531,"match_start":207},{"dbname":"PANTHER","id":"PTHR12537","locations":[{"end":524,"start":175}],"match_end":524,"match_start":175,"name":"RNA BINDING PROTEIN PUMILIO-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":303993,"start_pos":302277,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":191,"start":169}}],"name":"puf4","ortholog_annotations":[{"gene_uniquename":"SJAG_02239","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02239","ortholog_taxonid":4932,"ortholog_uniquename":"YGL014W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02239","ortholog_taxonid":4932,"ortholog_uniquename":"YGL178W","reference_uniquename":"PMID:29761456"}],"product":"pumilio family RNA-binding protein Puf4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["GO:0005829","GO:0010494","GO:0016071","GO:0000932"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000288":null,"GO:0000932":null,"GO:0003729":null,"GO:0005829":null,"GO:0010494":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02239.1"],"transcripts_by_uniquename":{"SJAG_02239.1":null},"uniprot_identifier":"B6K1X6","uniquename":"SJAG_02239"}


id: SJAG_02240
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100275],"is_not":false,"summary":null,"term":"GO:0006895"},{"annotations":[72325],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[100277],"is_not":false,"summary":null,"term":"GO:0006896"},{"annotations":[100278],"is_not":false,"summary":null,"term":"GO:0006874"},{"annotations":[100279],"is_not":false,"summary":null,"term":"GO:0030007"}],"cellular_component":[{"annotations":[59543],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100271],"is_not":false,"summary":null,"term":"GO:0005769"},{"annotations":[72326],"is_not":false,"summary":null,"term":"GO:0034044"},{"annotations":[72324],"is_not":false,"summary":null,"term":"GO:0005802"}],"molecular_function":[{"annotations":[100280],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["InterPro:IPR031673","InterPro:IPR031669","InterPro:IPR036420","GOA:B6K1X8","InterPro:IPR001357","InterPro:IPR003961","UniProtKB/TrEMBL:B6K1X8","InterPro:IPR036116","EnsemblGenomes-Tr:EEB07159","InterPro:IPR013783","EnsemblGenomes-Gn:SJAG_02240"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":354,"start":287}},{"range":{"end":621,"start":400}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"}],"genes_by_uniquename":{"SJAG_02240":null,"SPAC6G9.12":null,"YLR330W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"BRCA1 C Terminus (BRCT) domain","id":"PF00533","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":242,"start":169}],"match_end":242,"match_start":169,"name":"BRCT"},{"dbname":"PFAM","description":"Chitin biosynthesis protein CHS5 N-terminus","id":"PF16892","interpro_description":"Chitin biosynthesis protein Chs5, N-terminal","interpro_id":"IPR031673","interpro_name":"Chs5_N","locations":[{"end":53,"start":7}],"match_end":53,"match_start":7,"name":"CHS5_N"},{"dbname":"PFAM","description":"Fibronectin type III domain","id":"PF16893","interpro_description":"Fibronectin type III domain, fungi","interpro_id":"IPR031669","interpro_name":"Fn3_2","locations":[{"end":166,"start":78}],"match_end":166,"match_start":78,"name":"fn3_2"},{"dbname":"CDD","description":"FN3","id":"cd00063","interpro_description":"Fibronectin type III","interpro_id":"IPR003961","interpro_name":"FN3_dom","locations":[{"end":166,"start":80}],"match_end":166,"match_start":80,"name":"FN3"},{"dbname":"PROSITE_PROFILES","description":"Fibronectin type-III domain profile.","id":"PS50853","interpro_description":"Fibronectin type III","interpro_id":"IPR003961","interpro_name":"FN3_dom","locations":[{"end":169,"start":79}],"match_end":169,"match_start":79,"name":"FN3"},{"dbname":"PROSITE_PROFILES","description":"BRCT domain profile.","id":"PS50172","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":256,"start":167}],"match_end":256,"match_start":167,"name":"BRCT"},{"dbname":"SMART","id":"SM00292","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":246,"start":169}],"match_end":246,"match_start":169,"name":"BRCT_7"},{"dbname":"SUPERFAMILY","id":"SSF52113","interpro_description":"BRCT domain superfamily","interpro_id":"IPR036420","interpro_name":"BRCT_dom_sf","locations":[{"end":256,"start":170}],"match_end":256,"match_start":170,"name":"BRCT domain"},{"dbname":"SUPERFAMILY","id":"SSF49265","interpro_description":"Fibronectin type III superfamily","interpro_id":"IPR036116","interpro_name":"FN3_sf","locations":[{"end":168,"start":71}],"match_end":168,"match_start":71,"name":"Fibronectin type III"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10190","interpro_description":"BRCT domain superfamily","interpro_id":"IPR036420","interpro_name":"BRCT_dom_sf","locations":[{"end":290,"start":168}],"match_end":290,"match_start":168,"name":"BRCT domain"},{"dbname":"GENE3D","id":"G3DSA:6.20.120.50","locations":[{"end":78,"start":2}],"match_end":78,"match_start":2},{"dbname":"GENE3D","id":"G3DSA:2.60.40.10","interpro_description":"Immunoglobulin-like fold","interpro_id":"IPR013783","interpro_name":"Ig-like_fold","locations":[{"end":167,"start":79}],"match_end":167,"match_start":79,"name":"Immunoglobulins"},{"dbname":"PANTHER","id":"PTHR47351","interpro_description":"Chitin Synthase Export/Cell Fusion Regulator","interpro_id":"IPR052827","interpro_name":"CHS_Export/Cell_Fusion_Reg","locations":[{"end":613,"start":3}],"match_end":613,"match_start":3,"name":"CHITIN BIOSYNTHESIS PROTEIN CHS5"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":354,"start":287},{"end":621,"start":400}],"match_end":621,"match_start":287,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":304,"start":295},{"end":350,"start":338}],"match_end":350,"match_start":295,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":424,"start":407},{"end":555,"start":457},{"end":601,"start":590},{"end":621,"start":611}],"match_end":621,"match_start":407,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":336,"start":325}],"match_end":336,"match_start":325,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":307060,"start_pos":305195,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":275,"start":258}},{"range":{"end":310,"start":294}},{"range":{"end":364,"start":337}},{"range":{"end":531,"start":445}},{"range":{"end":557,"start":539}},{"range":{"end":610,"start":577}}],"name":"cfr1","ortholog_annotations":[{"gene_uniquename":"SJAG_02240","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02240","ortholog_taxonid":4932,"ortholog_uniquename":"YLR330W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02240","ortholog_taxonid":4932,"ortholog_uniquename":"YLR330W","reference_uniquename":"PMID:26896847"}],"product":"exomer complex BRCT domain subunit Cfr1/Chs5","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0030674"]}},"subset_termids":["GO:0031410","GO:0098771","GO:0005794","GO:0060090","GO:0016192","GO:0005768","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005769":null,"GO:0005802":null,"GO:0005829":null,"GO:0006874":null,"GO:0006893":null,"GO:0006895":null,"GO:0006896":null,"GO:0030007":null,"GO:0030674":null,"GO:0034044":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02240.1"],"transcripts_by_uniquename":{"SJAG_02240.1":null},"uniprot_identifier":"B6K1X8","uniquename":"SJAG_02240"}


id: SJAG_02241
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100266],"is_not":false,"summary":null,"term":"GO:0032120"},{"annotations":[100267],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[76939],"is_not":false,"summary":null,"term":"GO:0006906"}],"cellular_component":[{"annotations":[100256],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[100260],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[100261],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[100262],"is_not":false,"summary":null,"term":"GO:0031097"},{"annotations":[100263],"is_not":false,"summary":null,"term":"GO:0090619"},{"annotations":[76938],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[76940],"is_not":false,"summary":null,"term":"GO:0031201"}],"molecular_function":[{"annotations":[76937],"is_not":false,"summary":null,"term":"GO:0005484"},{"annotations":[76941],"is_not":false,"summary":null,"term":"GO:0019905"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1X9","InterPro:IPR001388","InterPro:IPR016444","GOA:B6K1X9","EnsemblGenomes-Tr:EEB07160","EnsemblGenomes-Gn:SJAG_02241"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"}],"genes_by_uniquename":{"HGNC:12645":null,"SJAG_02241":null,"SPAC6G9.11":null,"YAL030W":null,"YOR327C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Synaptobrevin","id":"PF00957","interpro_description":"v-SNARE, coiled-coil homology domain","interpro_id":"IPR042855","interpro_name":"V_SNARE_CC","locations":[{"end":114,"start":28}],"match_end":114,"match_start":28,"name":"Synaptobrevin"},{"dbname":"CDD","description":"R-SNARE_Snc1","id":"cd15874","locations":[{"end":88,"start":29}],"match_end":88,"match_start":29,"name":"R-SNARE_Snc1"},{"dbname":"PROSITE_PATTERNS","description":"Synaptobrevin signature.","id":"PS00417","interpro_description":"Synaptobrevin-like","interpro_id":"IPR001388","interpro_name":"Synaptobrevin-like","locations":[{"end":67,"start":48}],"match_end":67,"match_start":48,"name":"SYNAPTOBREVIN"},{"dbname":"PROSITE_PROFILES","description":"v-SNARE coiled-coil homology domain profile.","id":"PS50892","interpro_description":"v-SNARE, coiled-coil homology domain","interpro_id":"IPR042855","interpro_name":"V_SNARE_CC","locations":[{"end":90,"start":30}],"match_end":90,"match_start":30,"name":"V_SNARE"},{"dbname":"PRINTS","description":"Synaptobrevin signature","id":"PR00219","interpro_description":"Synaptobrevin-like","interpro_id":"IPR001388","interpro_name":"Synaptobrevin-like","locations":[{"end":74,"start":35},{"end":112,"start":93}],"match_end":112,"match_start":35,"name":"SYNAPTOBREVN"},{"dbname":"FUNFAM","description":"Synaptobrevin 1","id":"G3DSA:1.20.5.110:FF:000063","locations":[{"end":114,"start":1}],"match_end":114,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF58038","locations":[{"end":92,"start":28}],"match_end":92,"match_start":28,"name":"SNARE fusion complex"},{"dbname":"GENE3D","id":"G3DSA:1.20.5.110","locations":[{"end":114,"start":2}],"match_end":114,"match_start":2},{"dbname":"PANTHER","id":"PTHR45701","interpro_description":"Synaptobrevin/Vesicle-associated membrane protein","interpro_id":"IPR016444","interpro_name":"Synaptobrevin/VAMP","locations":[{"end":115,"start":19}],"match_end":115,"match_start":19,"name":"SYNAPTOBREVIN FAMILY MEMBER"},{"dbname":"PIRSF","id":"PIRSF005409","interpro_description":"Synaptobrevin/Vesicle-associated membrane protein","interpro_id":"IPR016444","interpro_name":"Synaptobrevin/VAMP","locations":[{"end":120,"start":2}],"match_end":120,"match_start":2,"name":"VAMP-5_synaptobrevin"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":18,"start":1}],"match_end":18,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":308391,"start_pos":308029,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":17,"start":3}},{"range":{"end":113,"start":95}}],"name":"syb1","ortholog_annotations":[{"gene_uniquename":"SJAG_02241","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12645","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02241","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02241","ortholog_taxonid":4932,"ortholog_uniquename":"YAL030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02241","ortholog_taxonid":4932,"ortholog_uniquename":"YAL030W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02241","ortholog_taxonid":4932,"ortholog_uniquename":"YOR327C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02241","ortholog_taxonid":4932,"ortholog_uniquename":"YOR327C","reference_uniquename":"PMID:26896847"}],"product":"SNAP receptor, synaptobrevin family","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0019905"],"not-binding":["GO:0005484"]}},"subset_termids":["GO:0005886","GO:0016192","GO:0015630","GO:0060090","GO:0005794","GO:0031410","GO:0061024","GO:0005768","GO:0005938","GO:0030437"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005484":null,"GO:0005768":null,"GO:0005794":null,"GO:0005886":null,"GO:0006886":null,"GO:0006906":null,"GO:0019905":null,"GO:0031097":null,"GO:0031201":null,"GO:0032120":null,"GO:0051285":null,"GO:0090619":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":115,"start":96}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02241.1"],"transcripts_by_uniquename":{"SJAG_02241.1":null},"uniprot_identifier":"B6K1X9","uniquename":"SJAG_02241"}


id: SJAG_02242
data:
  {"coiled_coil_coords":[{"range":{"end":1313,"start":1293}},{"range":{"end":1337,"start":1317}}],"cv_annotations":{"biological_process":[{"annotations":[74716],"is_not":false,"summary":null,"term":"GO:0006369"},{"annotations":[100249],"is_not":false,"summary":null,"term":"GO:0006386"}],"cellular_component":[{"annotations":[100245],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[74715],"is_not":false,"summary":null,"term":"GO:0016604"}],"molecular_function":[{"annotations":[100250],"is_not":false,"summary":null,"term":"GO:0033678"},{"annotations":[100251],"is_not":false,"summary":null,"term":"GO:0032574"},{"annotations":[100252],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[100253],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[74714],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[74713],"is_not":false,"summary":null,"term":"GO:0001147"}],"mondo":[{"annotations":[86872],"is_not":false,"summary":null,"term":"MONDO:0011223"},{"annotations":[86975],"is_not":false,"summary":null,"term":"MONDO:0018996"}]},"dbxrefs":["GOA:B6K1Y0","InterPro:IPR016024","InterPro:IPR024481","EnsemblGenomes-Tr:EEB07161","InterPro:IPR041679","InterPro:IPR041677","UniProtKB/TrEMBL:B6K1Y0","EnsemblGenomes-Gn:SJAG_02242","InterPro:IPR027417"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":809,"start":775}},{"range":{"end":876,"start":842}},{"range":{"end":1719,"start":1681}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"}],"genes_by_uniquename":{"HGNC:445":null,"SJAG_02242":null,"SPAC6G9.10c":null,"YLR430W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"AAA domain","id":"PF13086","interpro_description":"DNA2/NAM7 helicase, helicase domain","interpro_id":"IPR041677","interpro_name":"DNA2/NAM7_AAA_11","locations":[{"end":1425,"start":1140}],"match_end":1425,"match_start":1140,"name":"AAA_11"},{"dbname":"PFAM","description":"AAA domain","id":"PF13087","interpro_description":"DNA2/NAM7 helicase-like, C-terminal","interpro_id":"IPR041679","interpro_name":"DNA2/NAM7-like_C","locations":[{"end":1627,"start":1432}],"match_end":1627,"match_start":1432,"name":"AAA_12"},{"dbname":"PFAM","description":"SEN1 N terminal","id":"PF12726","interpro_description":"Helicase Sen1, N-terminal","interpro_id":"IPR024481","interpro_name":"Helicase_Sen1_N","locations":[{"end":238,"start":58},{"end":701,"start":449}],"match_end":701,"match_start":58,"name":"SEN1_N"},{"dbname":"PFAM","description":"Helicase SEN1 beta-barrel domain","id":"PF23576","interpro_description":"Helicase SEN1, beta-barrel domain","interpro_id":"IPR056474","interpro_name":"SEN1_barrel","locations":[{"end":1088,"start":993}],"match_end":1088,"match_start":993,"name":"SEN1_barrel"},{"dbname":"CDD","description":"DEXXQc_SETX","id":"cd18042","locations":[{"end":1456,"start":1141}],"match_end":1456,"match_start":1141,"name":"DEXXQc_SETX"},{"dbname":"CDD","description":"SF1_C_Upf1","id":"cd18808","interpro_description":"Upf1-like, C-terminal helicase domain","interpro_id":"IPR047187","interpro_name":"SF1_C_Upf1","locations":[{"end":1644,"start":1457}],"match_end":1644,"match_start":1457,"name":"SF1_C_Upf1"},{"dbname":"FUNFAM","description":"P-loop containing nucleoside triphosphate hydrolase","id":"G3DSA:3.40.50.300:FF:000326","locations":[{"end":1659,"start":1455}],"match_end":1659,"match_start":1455},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":1298,"start":1139},{"end":1649,"start":1333}],"match_end":1649,"match_start":1139,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":588,"start":482},{"end":731,"start":679}],"match_end":731,"match_start":482,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":1454,"start":1071},{"end":1663,"start":1456}],"match_end":1663,"match_start":1071},{"dbname":"PANTHER","id":"PTHR10887","interpro_description":"DNA2/NAM7-like helicase","interpro_id":"IPR045055","interpro_name":"DNA2/NAM7-like","locations":[{"end":1672,"start":588}],"match_end":1672,"match_start":588,"name":"DNA2/NAM7 HELICASE FAMILY"},{"dbname":"COILS","id":"Coil","locations":[{"end":1313,"start":1293},{"end":1337,"start":1317}],"match_end":1337,"match_start":1293,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":809,"start":775},{"end":876,"start":842},{"end":1719,"start":1681}],"match_end":1719,"match_start":775,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":1705,"start":1688}],"match_end":1705,"match_start":1688,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":314044,"start_pos":308828,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":216,"start":205}},{"range":{"end":382,"start":367}},{"range":{"end":866,"start":850}}],"name":"sen1","ortholog_annotations":[{"gene_uniquename":"SJAG_02242","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:445","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02242","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02242","ortholog_taxonid":4932,"ortholog_uniquename":"YLR430W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02242","ortholog_taxonid":4932,"ortholog_uniquename":"YLR430W","reference_uniquename":"PMID:26896847"}],"product":"ATP-dependent 5' to 3' DNA/RNA helicase Sen1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0001147","GO:0003723","GO:0005524"],"not-binding":["GO:0033678","GO:0032574","GO:0016887"]}},"subset_termids":["GO:0140098","MONDO:0006025","GO:0005634","GO:0005654","GO:0140097","GO:0006351","GO:0005694","MONDO:0021190","GO:0016853","MONDO:0005559","MONDO:0005066","MONDO:0005244","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0001147":null,"GO:0003723":null,"GO:0005524":null,"GO:0006369":null,"GO:0006386":null,"GO:0016604":null,"GO:0016887":null,"GO:0032574":null,"GO:0033678":null,"MONDO:0011223":null,"MONDO:0018996":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02242.1"],"transcripts_by_uniquename":{"SJAG_02242.1":null},"uniprot_identifier":"B6K1Y0","uniquename":"SJAG_02242"}


id: SJAG_02243
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74116],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[74115],"is_not":false,"summary":null,"term":"GO:0022625"}],"molecular_function":[{"annotations":[74113],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[74114],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02243","UniProtKB/TrEMBL:B6K1Y1","InterPro:IPR038630","GOA:B6K1Y1","InterPro:IPR000988","InterPro:IPR023442","EnsemblGenomes-Tr:EEB07162"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":149,"start":111}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"}],"genes_by_uniquename":{"HGNC:10325":null,"SJAG_02243":null,"SPAC6G9.09c":null,"SPCC330.14c":null,"YGL031C":null,"YGR148C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L24e","id":"PF01246","interpro_description":"Large ribosomal subunit protein eL24-related, N-terminal","interpro_id":"IPR000988","interpro_name":"Ribosomal_eL24-rel_N","locations":[{"end":65,"start":1}],"match_end":65,"match_start":1,"name":"Ribosomal_L24e"},{"dbname":"CDD","description":"Ribosomal_L24e_L24","id":"cd00472","interpro_description":"Large ribosomal subunit protein eL24-related, N-terminal","interpro_id":"IPR000988","interpro_name":"Ribosomal_eL24-rel_N","locations":[{"end":54,"start":1}],"match_end":54,"match_start":1,"name":"Ribosomal_L24e_L24"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L24e signature.","id":"PS01073","interpro_description":"Large ribosomal subunit protein eL24, conserved site","interpro_id":"IPR023442","interpro_name":"Ribosomal_eL24_CS","locations":[{"end":25,"start":8}],"match_end":25,"match_start":8,"name":"RIBOSOMAL_L24E"},{"dbname":"FUNFAM","description":"60S ribosomal protein L24","id":"G3DSA:2.30.170.20:FF:000002","locations":[{"end":68,"start":1}],"match_end":68,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF57716","locations":[{"end":56,"start":4}],"match_end":56,"match_start":4,"name":"Glucocorticoid receptor-like (DNA-binding domain)"},{"dbname":"GENE3D","id":"G3DSA:6.10.250.1270","locations":[{"end":135,"start":69}],"match_end":135,"match_start":69},{"dbname":"GENE3D","id":"G3DSA:2.30.170.20","interpro_description":"Ribosomal protein L24e/L24 superfamily","interpro_id":"IPR038630","interpro_name":"L24e/L24_sf","locations":[{"end":68,"start":1}],"match_end":68,"match_start":1,"name":"Ribosomal protein L24e"},{"dbname":"PANTHER","id":"PTHR10792","interpro_description":"Large ribosomal subunit protein eL24","interpro_id":"IPR056366","interpro_name":"Ribosomal_eL24","locations":[{"end":144,"start":1}],"match_end":144,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L24"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":149,"start":111}],"match_end":149,"match_start":111,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":315182,"start_pos":314733,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":134,"start":101}}],"name":"rpl24a","ortholog_annotations":[{"gene_uniquename":"SJAG_02243","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10325","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10325","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC330.14c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4932,"ortholog_uniquename":"YGL031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4932,"ortholog_uniquename":"YGL031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4932,"ortholog_uniquename":"YGL031C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4932,"ortholog_uniquename":"YGR148C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4932,"ortholog_uniquename":"YGR148C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02243","ortholog_taxonid":4932,"ortholog_uniquename":"YGR148C","reference_uniquename":"PMID:26896847"}],"product":"60S ribosomal protein L24","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0002181","GO:0005829","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003729":null,"GO:0003735":null,"GO:0022625":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02243.1"],"transcripts_by_uniquename":{"SJAG_02243.1":null},"uniprot_identifier":"B6K1Y1","uniquename":"SJAG_02243"}


id: SJAG_02244
data:
  {"coiled_coil_coords":[{"range":{"end":365,"start":340}}],"cv_annotations":{"biological_process":[{"annotations":[78430],"is_not":false,"summary":null,"term":"GO:1904293"},{"annotations":[67219],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[100230],"is_not":false,"summary":null,"term":"GO:0005654"}],"molecular_function":[{"annotations":[78429],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[100235],"is_not":false,"summary":null,"term":"GO:0140492"},{"annotations":[78431],"is_not":false,"summary":null,"term":"GO:0070628"}]},"dbxrefs":["GOA:B6K1Y2","InterPro:IPR018200","UniProtKB/TrEMBL:B6K1Y2","InterPro:IPR038765","InterPro:IPR000626","InterPro:IPR001394","InterPro:IPR029071","InterPro:IPR028889","EnsemblGenomes-Tr:EEB07163","EnsemblGenomes-Gn:SJAG_02244"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"}],"genes_by_uniquename":{"HGNC:12612":null,"SJAG_02244":null,"SPAC6G9.08":null,"YFR010W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin family","id":"PF00240","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":71,"start":4}],"match_end":71,"match_start":4,"name":"ubiquitin"},{"dbname":"PFAM","description":"Ubiquitin carboxyl-terminal hydrolase","id":"PF00443","interpro_description":"Peptidase C19, ubiquitin carboxyl-terminal hydrolase","interpro_id":"IPR001394","interpro_name":"Peptidase_C19_UCH","locations":[{"end":457,"start":101}],"match_end":457,"match_start":101,"name":"UCH"},{"dbname":"CDD","description":"Peptidase_C19A","id":"cd02657","locations":[{"end":458,"start":101}],"match_end":458,"match_start":101,"name":"Peptidase_C19A"},{"dbname":"CDD","description":"Ubl_USP14_like","id":"cd16104","locations":[{"end":72,"start":1}],"match_end":72,"match_start":1,"name":"Ubl_USP14_like"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin specific protease (USP) domain signature 1.","id":"PS00972","interpro_description":"Ubiquitin specific protease, conserved site","interpro_id":"IPR018200","interpro_name":"USP_CS","locations":[{"end":116,"start":101}],"match_end":116,"match_start":101,"name":"USP_1"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin specific protease (USP) domain signature 2.","id":"PS00973","interpro_description":"Ubiquitin specific protease, conserved site","interpro_id":"IPR018200","interpro_name":"USP_CS","locations":[{"end":411,"start":393}],"match_end":411,"match_start":393,"name":"USP_2"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin specific protease (USP) domain profile.","id":"PS50235","interpro_description":"Ubiquitin specific protease domain","interpro_id":"IPR028889","interpro_name":"USP_dom","locations":[{"end":460,"start":100}],"match_end":460,"match_start":100,"name":"USP_3"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin domain profile.","id":"PS50053","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":70,"start":2}],"match_end":70,"match_start":2,"name":"UBIQUITIN_2"},{"dbname":"SMART","id":"SM00213","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":72,"start":2}],"match_end":72,"match_start":2,"name":"ubq_7"},{"dbname":"SUPERFAMILY","id":"SSF54236","interpro_description":"Ubiquitin-like domain superfamily","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like_domsf","locations":[{"end":75,"start":2}],"match_end":75,"match_start":2,"name":"Ubiquitin-like"},{"dbname":"SUPERFAMILY","id":"SSF54001","interpro_description":"Papain-like cysteine peptidase superfamily","interpro_id":"IPR038765","interpro_name":"Papain-like_cys_pep_sf","locations":[{"end":458,"start":97}],"match_end":458,"match_start":97,"name":"Cysteine proteinases"},{"dbname":"GENE3D","id":"G3DSA:3.90.70.10","locations":[{"end":463,"start":92}],"match_end":463,"match_start":92,"name":"Cysteine proteinases"},{"dbname":"GENE3D","id":"G3DSA:3.10.20.90","locations":[{"end":75,"start":2}],"match_end":75,"match_start":2},{"dbname":"PANTHER","id":"PTHR43982","interpro_description":"Ubiquitin carboxyl-terminal hydrolase 14-like","interpro_id":"IPR044635","interpro_name":"UBP14-like","locations":[{"end":461,"start":2}],"match_end":461,"match_start":2,"name":"UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":365,"start":340}],"match_end":365,"match_start":340,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":317040,"start_pos":315478,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":363,"start":355}}],"name":"ubp6","ortholog_annotations":[{"gene_uniquename":"SJAG_02244","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12612","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02244","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02244","ortholog_taxonid":4932,"ortholog_uniquename":"YFR010W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02244","ortholog_taxonid":4932,"ortholog_uniquename":"YFR010W","reference_uniquename":"PMID:26896847"}],"product":"ubiquitin C-terminal hydrolase Ubp6","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0070628"],"not-binding":["GO:0140492","GO:0004843"]}},"subset_termids":["GO:0005634","GO:0008233","GO:0005654","GO:0030163","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004843":null,"GO:0005654":null,"GO:0043161":null,"GO:0070628":null,"GO:0140492":null,"GO:1904293":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02244.1"],"transcripts_by_uniquename":{"SJAG_02244.1":null},"uniprot_identifier":"B6K1Y2","uniquename":"SJAG_02244"}


id: SJAG_02245
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100225],"is_not":false,"summary":null,"term":"GO:0000147"},{"annotations":[100226],"is_not":false,"summary":null,"term":"GO:0090135"},{"annotations":[65119],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[76799],"is_not":false,"summary":null,"term":"GO:0034314"},{"annotations":[100229],"is_not":false,"summary":null,"term":"GO:0006897"}],"cellular_component":[{"annotations":[65121],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[76800],"is_not":false,"summary":null,"term":"GO:0005885"},{"annotations":[100223],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100224],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[76801],"is_not":false,"summary":null,"term":"GO:0051015"}],"mondo":[{"annotations":[85946],"is_not":false,"summary":null,"term":"MONDO:0859324"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02245","GOA:B6K1Y3","InterPro:IPR034666","UniProtKB/TrEMBL:B6K1Y3","EnsemblGenomes-Tr:EEB07164","InterPro:IPR008384"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"}],"genes_by_uniquename":{"HGNC:707":null,"SJAG_02245":null,"SPAC6G9.07c":null,"YKL013C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ARP2/3 complex 20 kDa subunit (ARPC4)","id":"PF05856","interpro_description":"Actin-related protein 2/3 complex subunit 4","interpro_id":"IPR008384","interpro_name":"ARPC4","locations":[{"end":166,"start":1}],"match_end":166,"match_start":1,"name":"ARPC4"},{"dbname":"FUNFAM","description":"Actin-related protein 2/3 complex subunit 4","id":"G3DSA:3.30.1460.20:FF:000001","locations":[{"end":168,"start":1}],"match_end":168,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF69645","interpro_description":"Arp2/3 complex subunit 2/4","interpro_id":"IPR034666","interpro_name":"ARPC2/4","locations":[{"end":168,"start":3}],"match_end":168,"match_start":3,"name":"Arp2/3 complex subunits"},{"dbname":"GENE3D","id":"G3DSA:3.30.1460.20","interpro_description":"Arp2/3 complex subunit 2/4","interpro_id":"IPR034666","interpro_name":"ARPC2/4","locations":[{"end":168,"start":1}],"match_end":168,"match_start":1},{"dbname":"PANTHER","id":"PTHR22629","interpro_description":"Actin-related protein 2/3 complex subunit 4","interpro_id":"IPR008384","interpro_name":"ARPC4","locations":[{"end":168,"start":1}],"match_end":168,"match_start":1,"name":"ARP2/3 COMPLEX 20 KD SUBUNIT"},{"dbname":"PIRSF","id":"PIRSF039100","interpro_description":"Actin-related protein 2/3 complex subunit 4","interpro_id":"IPR008384","interpro_name":"ARPC4","locations":[{"end":169,"start":1}],"match_end":169,"match_start":1,"name":"ARPC4"}],"location":{"chromosome_name":"supercont5.1","end_pos":318031,"start_pos":317235,"strand":"forward"},"name":"arc4","ortholog_annotations":[{"gene_uniquename":"SJAG_02245","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:707","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02245","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02245","ortholog_taxonid":4932,"ortholog_uniquename":"YKL013C","reference_uniquename":"PMID:29761456"}],"product":"ARP2/3 actin-organizing complex subunit Arc4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051015"]}},"subset_termids":["GO:0003779","GO:0005829","GO:0030479","GO:0015629","GO:0065003","GO:0005938","GO:0030036","GO:0005634","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000147":null,"GO:0005634":null,"GO:0005829":null,"GO:0005885":null,"GO:0006897":null,"GO:0030041":null,"GO:0030479":null,"GO:0034314":null,"GO:0051015":null,"GO:0090135":null,"MONDO:0859324":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02245.1"],"transcripts_by_uniquename":{"SJAG_02245.1":null},"uniprot_identifier":"B6K1Y3","uniquename":"SJAG_02245"}


id: SJAG_02246
data:
  {"coiled_coil_coords":[{"range":{"end":219,"start":185}},{"range":{"end":260,"start":230}},{"range":{"end":313,"start":265}},{"range":{"end":356,"start":322}},{"range":{"end":481,"start":366}},{"range":{"end":573,"start":508}},{"range":{"end":602,"start":582}},{"range":{"end":644,"start":610}},{"range":{"end":722,"start":653}},{"range":{"end":802,"start":747}},{"range":{"end":875,"start":841}},{"range":{"end":926,"start":892}},{"range":{"end":982,"start":934}},{"range":{"end":1077,"start":1050}}],"cv_annotations":{"biological_process":[{"annotations":[100219],"is_not":false,"summary":null,"term":"GO:0061804"}],"cellular_component":[{"annotations":[100213],"is_not":false,"summary":null,"term":"GO:0061493"},{"annotations":[68419],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100215],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[100217],"is_not":false,"summary":null,"term":"GO:0071958"},{"annotations":[100218],"is_not":false,"summary":null,"term":"GO:0110092"}],"molecular_function":[{"annotations":[100220],"is_not":false,"summary":null,"term":"GO:0140475"}],"mondo":[{"annotations":[87610],"is_not":false,"summary":null,"term":"MONDO:0008872"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1Y4","GOA:B6K1Y4","InterPro:IPR012943","InterPro:IPR019528","EnsemblGenomes-Gn:SJAG_02246","EnsemblGenomes-Tr:EEB07165"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":894,"start":869}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"}],"genes_by_uniquename":{"HGNC:16068":null,"SJAG_02246":null,"SPAC6G9.06c":null,"YDR356W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Pericentrin-AKAP-450 domain of centrosomal targeting protein","id":"PF10495","interpro_description":"Pericentrin/AKAP-450 centrosomal targeting domain","interpro_id":"IPR019528","interpro_name":"PACT_domain","locations":[{"end":1184,"start":1110}],"match_end":1184,"match_start":1110,"name":"PACT_coil_coil"},{"dbname":"PFAM","description":"Centrosomin N-terminal motif 1","id":"PF07989","interpro_description":"Centrosomin, N-terminal motif 1","interpro_id":"IPR012943","interpro_name":"Cnn_1N","locations":[{"end":219,"start":148}],"match_end":219,"match_start":148,"name":"Cnn_1N"},{"dbname":"SUPERFAMILY","id":"SSF57997","locations":[{"end":976,"start":752}],"match_end":976,"match_start":752,"name":"Tropomyosin"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.1490","locations":[{"end":1126,"start":939}],"match_end":1126,"match_start":939},{"dbname":"GENE3D","id":"G3DSA:1.20.5.1160","locations":[{"end":421,"start":304}],"match_end":421,"match_start":304},{"dbname":"PANTHER","id":"PTHR47357","locations":[{"end":669,"start":183}],"match_end":669,"match_start":183,"name":"COP1-INTERACTIVE PROTEIN 1"},{"dbname":"COILS","id":"Coil","locations":[{"end":219,"start":185},{"end":260,"start":230},{"end":313,"start":265},{"end":356,"start":322},{"end":481,"start":366},{"end":573,"start":508},{"end":602,"start":582},{"end":644,"start":610},{"end":722,"start":653},{"end":802,"start":747},{"end":875,"start":841},{"end":926,"start":892},{"end":982,"start":934},{"end":1077,"start":1050}],"match_end":1077,"match_start":185,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":894,"start":869}],"match_end":894,"match_start":869,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":883,"start":871}],"match_end":883,"match_start":871,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":322410,"start_pos":318709,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":344,"start":329}},{"range":{"end":374,"start":355}},{"range":{"end":527,"start":516}},{"range":{"end":707,"start":686}},{"range":{"end":898,"start":883}}],"name":"pcp1","ortholog_annotations":[{"gene_uniquename":"SJAG_02246","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16068","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02246","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02246","ortholog_taxonid":4932,"ortholog_uniquename":"YDR356W","reference_uniquename":"PMID:29761456"}],"product":"gamma tubulin complex linker, pericentrin/kendrin Pcp1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140475"]}},"subset_termids":["GO:0000226","GO:0015630","MONDO:0005497","GO:0000070","GO:0005634","GO:0005816","GO:0060090","MONDO:0700092"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0035974":null,"GO:0061493":null,"GO:0061804":null,"GO:0071958":null,"GO:0110092":null,"GO:0140475":null,"MONDO:0008872":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02246.1"],"transcripts_by_uniquename":{"SJAG_02246.1":null},"uniprot_identifier":"B6K1Y4","uniquename":"SJAG_02246"}


id: SJAG_02247
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100207],"is_not":false,"summary":null,"term":"GO:1990748"},{"annotations":[78411],"is_not":false,"summary":null,"term":"GO:0015938"},{"annotations":[100209],"is_not":false,"summary":null,"term":"GO:0009132"}],"cellular_component":[{"annotations":[100205],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[100206],"is_not":false,"summary":null,"term":"GO:0005777"}],"molecular_function":[{"annotations":[67201],"is_not":false,"summary":null,"term":"GO:0010945"},{"annotations":[100211],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[100212],"is_not":false,"summary":null,"term":"GO:0030145"}]},"dbxrefs":["InterPro:IPR000086","InterPro:IPR015797","GOA:B6K1Y5","UniProtKB/TrEMBL:B6K1Y5","EnsemblGenomes-Tr:EEB07166","EnsemblGenomes-Gn:SJAG_02247"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"}],"genes_by_uniquename":{"HGNC:8055":null,"SJAG_02247":null,"SPAC6G9.05":null,"YLR151C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NUDIX domain","id":"PF00293","interpro_description":"NUDIX hydrolase domain","interpro_id":"IPR000086","interpro_name":"NUDIX_hydrolase_dom","locations":[{"end":176,"start":97}],"match_end":176,"match_start":97,"name":"NUDIX"},{"dbname":"CDD","description":"NUDIX_CoAse_Nudt7","id":"cd03426","interpro_description":"Coenzyme A pyrophosphatase","interpro_id":"IPR045121","interpro_name":"CoAse","locations":[{"end":246,"start":95}],"match_end":246,"match_start":95,"name":"NUDIX_CoAse_Nudt7"},{"dbname":"PROSITE_PROFILES","description":"Nudix hydrolase domain profile.","id":"PS51462","interpro_description":"NUDIX hydrolase domain","interpro_id":"IPR000086","interpro_name":"NUDIX_hydrolase_dom","locations":[{"end":259,"start":94}],"match_end":259,"match_start":94,"name":"NUDIX"},{"dbname":"SUPERFAMILY","id":"SSF55811","interpro_description":"NUDIX hydrolase-like domain superfamily","interpro_id":"IPR015797","interpro_name":"NUDIX_hydrolase-like_dom_sf","locations":[{"end":245,"start":96}],"match_end":245,"match_start":96,"name":"Nudix"},{"dbname":"GENE3D","id":"G3DSA:3.90.79.10","locations":[{"end":250,"start":70}],"match_end":250,"match_start":70,"name":"Nucleoside Triphosphate Pyrophosphohydrolase"},{"dbname":"PANTHER","id":"PTHR12992","interpro_description":"Coenzyme A pyrophosphatase","interpro_id":"IPR045121","interpro_name":"CoAse","locations":[{"end":253,"start":51}],"match_end":253,"match_start":51,"name":"NUDIX HYDROLASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":323355,"start_pos":322512,"strand":"reverse"},"name":"pcd1","ortholog_annotations":[{"gene_uniquename":"SJAG_02247","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8055","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02247","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02247","ortholog_taxonid":4932,"ortholog_uniquename":"YLR151C","reference_uniquename":"PMID:29761456"}],"product":"coenzyme A diphosphatase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287","GO:0030145"],"not-binding":["GO:0010945"]}},"subset_termids":["GO:0098754","GO:0005739","GO:0005777","GO:0055086","GO:0006790"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0005739":null,"GO:0005777":null,"GO:0009132":null,"GO:0010945":null,"GO:0015938":null,"GO:0030145":null,"GO:1990748":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02247.1"],"transcripts_by_uniquename":{"SJAG_02247.1":null},"uniprot_identifier":"B6K1Y5","uniquename":"SJAG_02247"}


id: SJAG_02248
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100197],"is_not":false,"summary":null,"term":"GO:0031322"},{"annotations":[100199],"is_not":false,"summary":null,"term":"GO:0070583"}],"cellular_component":[{"annotations":[100185],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100187],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[100189],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[100191],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[100193],"is_not":false,"summary":null,"term":"GO:0034399"}],"molecular_function":[{"annotations":[65393],"is_not":false,"summary":null,"term":"GO:0005085"},{"annotations":[100203],"is_not":false,"summary":null,"term":"GO:0032266"}]},"dbxrefs":["InterPro:IPR023394","GOA:B6K1Y6","EnsemblGenomes-Gn:SJAG_02248","UniProtKB/TrEMBL:B6K1Y6","EnsemblGenomes-Tr:EEB07167","InterPro:IPR035999","InterPro:IPR000904","InterPro:IPR011993"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":69,"start":46}},{"range":{"end":140,"start":87}},{"range":{"end":256,"start":236}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"}],"genes_by_uniquename":{"HGNC:19092":null,"HGNC:19093":null,"HGNC:19096":null,"HGNC:9507":null,"SJAG_02248":null,"SPAC6G9.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sec7 domain","id":"PF01369","interpro_description":"Sec7 domain","interpro_id":"IPR000904","interpro_name":"Sec7_dom","locations":[{"end":771,"start":653}],"match_end":771,"match_start":653,"name":"Sec7"},{"dbname":"PROSITE_PROFILES","description":"SEC7 domain profile.","id":"PS50190","interpro_description":"Sec7 domain","interpro_id":"IPR000904","interpro_name":"Sec7_dom","locations":[{"end":804,"start":620}],"match_end":804,"match_start":620,"name":"SEC7"},{"dbname":"SMART","id":"SM00222","interpro_description":"Sec7 domain","interpro_id":"IPR000904","interpro_name":"Sec7_dom","locations":[{"end":806,"start":606}],"match_end":806,"match_start":606,"name":"sec7_5"},{"dbname":"SUPERFAMILY","id":"SSF48425","interpro_description":"Sec7 domain superfamily","interpro_id":"IPR035999","interpro_name":"Sec7_dom_sf","locations":[{"end":792,"start":620},{"end":850,"start":835}],"match_end":850,"match_start":620,"name":"Sec7 domain"},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":1104,"start":964}],"match_end":1104,"match_start":964,"name":"PH domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.1000.11","interpro_description":"Sec7, C-terminal domain superfamily","interpro_id":"IPR023394","interpro_name":"Sec7_C_sf","locations":[{"end":857,"start":687}],"match_end":857,"match_start":687},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":69,"start":46},{"end":140,"start":87},{"end":256,"start":236}],"match_end":256,"match_start":46,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":133,"start":108},{"end":256,"start":243}],"match_end":256,"match_start":108,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":329704,"start_pos":326015,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":100,"start":89}},{"range":{"end":121,"start":112}},{"range":{"end":195,"start":181}},{"range":{"end":273,"start":259}},{"range":{"end":349,"start":334}},{"range":{"end":442,"start":429}},{"range":{"end":590,"start":574}}],"name":"spo7b","ortholog_annotations":[{"gene_uniquename":"SJAG_02248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19092","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19093","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19096","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9507","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02248","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.04","reference_uniquename":"PMID:21511999"}],"product":"Arf GEF Spo7","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0032266"],"not-binding":["GO:0005085"]}},"subset_termids":["GO:0008289","GO:0034399","GO:0061024","GO:0015630","GO:0098772","GO:0005634","GO:0072686","GO:0005085","GO:0000226","GO:0005816","GO:0030234","GO:0030437"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005085":null,"GO:0005635":null,"GO:0005737":null,"GO:0031322":null,"GO:0032266":null,"GO:0034399":null,"GO:0035974":null,"GO:0070583":null,"GO:0072686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02248.1"],"transcripts_by_uniquename":{"SJAG_02248.1":null},"uniprot_identifier":"B6K1Y6","uniquename":"SJAG_02248"}


id: SJAG_02249
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":56,"start":56}}],"cv_annotations":{"biological_process":[{"annotations":[75557],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[75558],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[75556],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[75555],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[63589],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[75553],"is_not":false,"summary":null,"term":"GO:0004683"},{"annotations":[75554],"is_not":false,"summary":null,"term":"GO:0005516"}]},"dbxrefs":["InterPro:IPR008271","InterPro:IPR000719","InterPro:IPR011009","EnsemblGenomes-Tr:EEB07168","EnsemblGenomes-Gn:SJAG_02249","UniProtKB/TrEMBL:B6K1Y7","GOA:B6K1Y7","InterPro:IPR017441"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubp6","uniquename":"SJAG_02244"},{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"}],"genes_by_uniquename":{"SJAG_02249":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":283,"start":23}],"match_end":283,"match_start":23,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_CAMK","id":"cd05117","locations":[{"end":282,"start":23}],"match_end":282,"match_start":23,"name":"STKc_CAMK"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":56,"start":29}],"match_end":56,"match_start":29,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":154,"start":142}],"match_end":154,"match_start":142,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":283,"start":23}],"match_end":283,"match_start":23,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":283,"start":23}],"match_end":283,"match_start":23,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Maternal embryonic leucine zipper kinase","id":"G3DSA:1.10.510.10:FF:000571","locations":[{"end":285,"start":14}],"match_end":285,"match_start":14},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":284,"start":13}],"match_end":284,"match_start":13,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":285,"start":13}],"match_end":285,"match_start":13,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PANTHER","id":"PTHR24347","locations":[{"end":283,"start":21}],"match_end":283,"match_start":21,"name":"SERINE/THREONINE-PROTEIN KINASE"},{"dbname":"PIRSF","id":"PIRSF000654","locations":[{"end":279,"start":2}],"match_end":279,"match_start":2,"name":"ILK"}],"location":{"chromosome_name":"supercont5.1","end_pos":331803,"start_pos":330755,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":46,"start":35}}],"product":"serine/threonine protein kinase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0005516"],"not-binding":["GO:0004683"]}},"subset_termids":["GO:0016301","GO:0023052","GO:0005634","GO:0004672","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004683":null,"GO:0005516":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0007165":null,"GO:0034599":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02249.1"],"transcripts_by_uniquename":{"SJAG_02249.1":null},"uniprot_identifier":"B6K1Y7","uniquename":"SJAG_02249"}


id: SJAG_02250
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":641,"start":1}}],"cv_annotations":{"biological_process":[{"annotations":[70786],"is_not":false,"summary":null,"term":"GO:0000480"},{"annotations":[70784],"is_not":false,"summary":null,"term":"GO:0000447"},{"annotations":[70785],"is_not":false,"summary":null,"term":"GO:0000472"},{"annotations":[70781],"is_not":false,"summary":null,"term":"GO:0000056"}],"cellular_component":[{"annotations":[70782],"is_not":false,"summary":null,"term":"GO:0030686"},{"annotations":[70779],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[70783],"is_not":false,"summary":null,"term":"GO:0030688"}],"molecular_function":[{"annotations":[70780],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["UniProtKB/Swiss-Prot:B6K1Y8","InterPro:IPR001313","InterPro:IPR033133","InterPro:IPR011989","EnsemblGenomes-Gn:SJAG_02250","InterPro:IPR040000","GOA:B6K1Y8","InterPro:IPR016024","EnsemblGenomes-Tr:EEB07169"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":39,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arc4","uniquename":"SJAG_02245"},{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"},{"name":"ldb1","uniquename":"SJAG_02255"}],"genes_by_uniquename":{"HGNC:19826":null,"SJAG_02250":null,"SPAC6G9.02c":null,"YJL010C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NOP9-like PUF repeat domain","id":"PF22493","interpro_description":"Pumilio RNA-binding repeat","interpro_id":"IPR001313","interpro_name":"Pumilio_RNA-bd_rpt","locations":[{"end":569,"start":92}],"match_end":569,"match_start":92,"name":"PUF_NOP9"},{"dbname":"PROSITE_PROFILES","description":"Pumilio homology domain (PUM-HD) profile.","id":"PS50303","interpro_description":"Pumilio homology domain","interpro_id":"IPR033133","interpro_name":"PUM-HD","locations":[{"end":454,"start":15}],"match_end":454,"match_start":15,"name":"PUM_HD"},{"dbname":"PROSITE_PROFILES","description":"Pumilio RNA-binding repeat profile.","id":"PS50302","interpro_description":"Pumilio RNA-binding repeat","interpro_id":"IPR001313","interpro_name":"Pumilio_RNA-bd_rpt","locations":[{"end":373,"start":337}],"match_end":373,"match_start":337,"name":"PUM"},{"dbname":"SMART","id":"SM00025","interpro_description":"Pumilio RNA-binding repeat","interpro_id":"IPR001313","interpro_name":"Pumilio_RNA-bd_rpt","locations":[{"end":159,"start":89},{"end":217,"start":185},{"end":285,"start":249},{"end":373,"start":302},{"end":553,"start":478}],"match_end":553,"match_start":89,"name":"pum_5"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":207,"start":73},{"end":273,"start":236},{"end":575,"start":309}],"match_end":575,"match_start":73,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":572,"start":56}],"match_end":572,"match_start":56},{"dbname":"PANTHER","id":"PTHR13102","interpro_description":"Nucleolar protein 9","interpro_id":"IPR040000","interpro_name":"NOP9","locations":[{"end":605,"start":4}],"match_end":605,"match_start":4,"name":"NUCLEOLAR PROTEIN 9"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":39,"start":1}],"match_end":39,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":30,"start":20}],"match_end":30,"match_start":20,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":14,"start":1}],"match_end":14,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":334182,"start_pos":332210,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":209,"start":195}},{"range":{"end":484,"start":462}}],"name":"nop9","ortholog_annotations":[{"gene_uniquename":"SJAG_02250","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19826","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02250","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02250","ortholog_taxonid":4932,"ortholog_uniquename":"YJL010C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02250","ortholog_taxonid":4932,"ortholog_uniquename":"YJL010C","reference_uniquename":"PMID:26896847"}],"product":"pumilio family RNA-binding protein Nop9","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0006913","GO:0030684","GO:0005634","GO:0042254","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000056":null,"GO:0000447":null,"GO:0000472":null,"GO:0000480":null,"GO:0003723":null,"GO:0005730":null,"GO:0030686":null,"GO:0030688":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02250.1"],"transcripts_by_uniquename":{"SJAG_02250.1":null},"uniprot_identifier":"B6K1Y8","uniquename":"SJAG_02250"}


id: SJAG_02251
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[100174],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100175],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["InterPro:IPR013885","EnsemblGenomes-Gn:SJAG_02251","EnsemblGenomes-Tr:EEB07170","UniProtKB/TrEMBL:B6K1Y9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":67,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pcp1","uniquename":"SJAG_02246"},{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"},{"name":"ldb1","uniquename":"SJAG_02255"},{"name":"sqs1","uniquename":"SJAG_02256"}],"genes_by_uniquename":{"SJAG_02251":null,"SPAC6G9.01c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Eukaryotic protein of unknown function (DUF1764)","id":"PF08576","interpro_description":"Protein of unknown function DUF1764, eukaryotic","interpro_id":"IPR013885","interpro_name":"DUF1764_euk","locations":[{"end":96,"start":2}],"match_end":96,"match_start":2,"name":"DUF1764"},{"dbname":"PANTHER","id":"PTHR34066","interpro_description":"Protein of unknown function DUF1764, eukaryotic","interpro_id":"IPR013885","interpro_name":"DUF1764_euk","locations":[{"end":97,"start":2}],"match_end":97,"match_start":2,"name":"GROWTH FACTOR 2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":67,"start":1}],"match_end":67,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":34,"start":13}],"match_end":34,"match_start":13,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":334982,"start_pos":334509,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":31,"start":8}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_02251","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.01c","reference_uniquename":"PMID:21511999"}],"product":"DUF1764 family conserved eukaryotic protein, fungi, plants, apicomplexa","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02251.1"],"transcripts_by_uniquename":{"SJAG_02251.1":null},"uniprot_identifier":"B6K1Y9","uniquename":"SJAG_02251"}


id: SJAG_02252
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[63151],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[75220],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[75222],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[75221],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[63150],"is_not":false,"summary":null,"term":"GO:0008270"}],"single_locus_phenotype":[{"annotations":[119899],"is_not":false,"summary":null,"term":"FYPO:0006557"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07171","InterPro:IPR036236","GOA:B6K1Z0","EnsemblGenomes-Gn:SJAG_02252","UniProtKB/TrEMBL:B6K1Z0","InterPro:IPR013087"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":175,"start":151}},{"range":{"end":298,"start":278}},{"range":{"end":547,"start":527}}],"feature_publications":[{"reference_uniquename":"PMID:22300943","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pcd1","uniquename":"SJAG_02247"},{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"},{"name":"ldb1","uniquename":"SJAG_02255"},{"name":"sqs1","uniquename":"SJAG_02256"},{"name":"wsc1","uniquename":"SJAG_02258"}],"genes_by_uniquename":{"SJAG_02252":null,"SPAC6G10.12c":null,"YDR146C":null,"YLR131C":null},"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc finger, C2H2 type","id":"PF00096","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":459,"start":435},{"end":487,"start":465}],"match_end":487,"match_start":435,"name":"zf-C2H2"},{"dbname":"PFAM","description":"C2H2-type zinc finger","id":"PF13912","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":511,"start":496}],"match_end":511,"match_start":496,"name":"zf-C2H2_6"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger C2H2 type domain signature.","id":"PS00028","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":459,"start":437},{"end":487,"start":467}],"match_end":487,"match_start":437,"name":"ZINC_FINGER_C2H2_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2H2 type domain profile.","id":"PS50157","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":492,"start":435}],"match_end":492,"match_start":435,"name":"ZINC_FINGER_C2H2_2"},{"dbname":"SMART","id":"SM00355","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":459,"start":435},{"end":487,"start":465}],"match_end":487,"match_start":435,"name":"c2h2final6"},{"dbname":"FUNFAM","description":"Wilms tumor 1-KTS isoform","id":"G3DSA:3.30.160.60:FF:000063","locations":[{"end":515,"start":428}],"match_end":515,"match_start":428},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":510,"start":435}],"match_end":510,"match_start":435,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":514,"start":418}],"match_end":514,"match_start":418,"name":"Classic Zinc Finger"},{"dbname":"PANTHER","id":"PTHR24388","interpro_description":"Snail/Krueppel C2H2-type Zinc-finger","interpro_id":"IPR050527","interpro_name":"Snail/Krueppel_Znf","locations":[{"end":531,"start":301}],"match_end":531,"match_start":301,"name":"ZINC FINGER PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":175,"start":151},{"end":298,"start":278},{"end":547,"start":527}],"match_end":547,"match_start":151,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":298,"start":285}],"match_end":298,"match_start":285,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":337141,"start_pos":335471,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":127,"start":105}},{"range":{"end":173,"start":161}},{"range":{"end":298,"start":281}}],"name":"ace2","ortholog_annotations":[{"gene_uniquename":"SJAG_02252","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G10.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02252","ortholog_taxonid":4932,"ortholog_uniquename":"YDR146C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02252","ortholog_taxonid":4932,"ortholog_uniquename":"YLR131C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02252","ortholog_taxonid":4932,"ortholog_uniquename":"YLR131C","reference_uniquename":"PMID:26896847"}],"product":"DNA-binding transcription factor Ace2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:22300943":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978","GO:0008270"],"not-binding":["GO:0001228"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0006557"]}},"subset_termids":["GO:0003700","GO:0006351","GO:0005634","GO:0006355","FYPO:0001320"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000137":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"GO:0000978":null,"GO:0001228":null,"GO:0005634":null,"GO:0008270":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02252.1"],"transcripts_by_uniquename":{"SJAG_02252.1":null},"uniprot_identifier":"B6K1Z0","uniquename":"SJAG_02252"}


id: SJAG_02253
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100155],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[80079],"is_not":false,"summary":null,"term":"GO:0019941"},{"annotations":[100159],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[100151],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[98991],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[80082],"is_not":false,"summary":null,"term":"GO:0031386"},{"annotations":[69320],"is_not":false,"summary":null,"term":"GO:0003735"},{"annotations":[80083],"is_not":false,"summary":null,"term":"GO:0031625"},{"annotations":[100165],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02253","InterPro:IPR002906","InterPro:IPR019954","EnsemblGenomes-Tr:EEB07172","InterPro:IPR019956","GOA:B6K1Z1","InterPro:IPR038582","InterPro:IPR011332","UniProtKB/TrEMBL:B6K1Z1","InterPro:IPR000626","InterPro:IPR029071"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spo7b","uniquename":"SJAG_02248"},{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"},{"name":"ldb1","uniquename":"SJAG_02255"},{"name":"sqs1","uniquename":"SJAG_02256"},{"name":"wsc1","uniquename":"SJAG_02258"},{"uniquename":"SJAG_02260"}],"genes_by_uniquename":{"HGNC:10417":null,"SJAG_02253":null,"SPAC589.10c":null,"SPAC6G10.11c":null,"YLR167W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S27a","id":"PF01599","interpro_description":"Small ribosomal subunit protein eS31","interpro_id":"IPR002906","interpro_name":"Ribosomal_eS31","locations":[{"end":145,"start":102}],"match_end":145,"match_start":102,"name":"Ribosomal_S27"},{"dbname":"PFAM","description":"Ubiquitin family","id":"PF00240","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":74,"start":3}],"match_end":74,"match_start":3,"name":"ubiquitin"},{"dbname":"CDD","description":"Ubl_ubiquitin","id":"cd01803","locations":[{"end":76,"start":1}],"match_end":76,"match_start":1,"name":"Ubl_ubiquitin"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin domain signature.","id":"PS00299","interpro_description":"Ubiquitin conserved site","interpro_id":"IPR019954","interpro_name":"Ubiquitin_CS","locations":[{"end":52,"start":27}],"match_end":52,"match_start":27,"name":"UBIQUITIN_1"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin domain profile.","id":"PS50053","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":76,"start":1}],"match_end":76,"match_start":1,"name":"UBIQUITIN_2"},{"dbname":"SMART","id":"SM01402","interpro_description":"Small ribosomal subunit protein eS31","interpro_id":"IPR002906","interpro_name":"Ribosomal_eS31","locations":[{"end":145,"start":102}],"match_end":145,"match_start":102,"name":"Ribosomal_S27_2"},{"dbname":"SMART","id":"SM00213","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":72,"start":1}],"match_end":72,"match_start":1,"name":"ubq_7"},{"dbname":"PRINTS","description":"Ubiquitin signature","id":"PR00348","interpro_description":"Ubiquitin domain","interpro_id":"IPR019956","interpro_name":"Ubiquitin_dom","locations":[{"end":74,"start":11}],"match_end":74,"match_start":11,"name":"UBIQUITIN"},{"dbname":"FUNFAM","description":"Ubiquitin-40S ribosomal protein S27a","id":"G3DSA:3.10.20.90:FF:000008","locations":[{"end":79,"start":1}],"match_end":79,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF54236","interpro_description":"Ubiquitin-like domain superfamily","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like_domsf","locations":[{"end":93,"start":1}],"match_end":93,"match_start":1,"name":"Ubiquitin-like"},{"dbname":"SUPERFAMILY","id":"SSF57829","interpro_description":"Zinc-binding ribosomal protein","interpro_id":"IPR011332","interpro_name":"Ribosomal_zn-bd","locations":[{"end":147,"start":100}],"match_end":147,"match_start":100,"name":"Zn-binding ribosomal proteins"},{"dbname":"GENE3D","id":"G3DSA:3.10.20.90","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:6.20.50.150","interpro_description":"Small ribosomal subunit protein eS31 eukaryotic-type superfamily","interpro_id":"IPR038582","interpro_name":"Ribosomal_eS31_euk-type_sf","locations":[{"end":149,"start":83}],"match_end":149,"match_start":83},{"dbname":"PANTHER","id":"PTHR10666","interpro_description":"Ubiquitin and ubiquitin-like","interpro_id":"IPR050158","interpro_name":"Ubiquitin_ubiquitin-like","locations":[{"end":86,"start":1}],"match_end":86,"match_start":1,"name":"UBIQUITIN"},{"dbname":"NCBIFAM","description":"30S ribosomal protein S27ae","id":"NF001669","locations":[{"end":143,"start":93}],"match_end":143,"match_start":93,"name":"PRK00432.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":338136,"start_pos":337684,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":96,"start":77}}],"name":"ubi3","ortholog_annotations":[{"gene_uniquename":"SJAG_02253","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10417","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02253","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10417","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02253","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.10c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_02253","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G10.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02253","ortholog_taxonid":4932,"ortholog_uniquename":"YLR167W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02253","ortholog_taxonid":4932,"ortholog_uniquename":"YLR167W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02253","ortholog_taxonid":4932,"ortholog_uniquename":"YLR167W","reference_uniquename":"PMID:26896847"}],"product":"ribosomal-ubiquitin fusion protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031625","GO:0008270"],"not-binding":["GO:0031386","GO:0003735"]}},"subset_termids":["GO:0005829","GO:0005730","GO:0005198","GO:0030163","GO:0022626","GO:0042254","GO:0002181","GO:0005634","GO:0031386"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0008270":null,"GO:0019941":null,"GO:0022627":null,"GO:0031386":null,"GO:0031625":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02253.1"],"transcripts_by_uniquename":{"SJAG_02253.1":null},"uniprot_identifier":"B6K1Z1","uniquename":"SJAG_02253"}


id: SJAG_02254
data:
  {"coiled_coil_coords":[{"range":{"end":142,"start":115}},{"range":{"end":313,"start":288}}],"cv_annotations":{"biological_process":[{"annotations":[108843],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[108844],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[77253],"is_not":false,"summary":null,"term":"GO:0016514"}],"molecular_function":[{"annotations":[77252],"is_not":false,"summary":null,"term":"GO:0000976"}],"mondo":[{"annotations":[86341],"is_not":false,"summary":null,"term":"MONDO:0007617"},{"annotations":[86643],"is_not":false,"summary":null,"term":"MONDO:0013819"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07173","GOA:B6K1Z2","EnsemblGenomes-Gn:SJAG_02254","InterPro:IPR001606","InterPro:IPR036431","UniProtKB/TrEMBL:B6K1Z2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":94,"start":1}},{"range":{"end":186,"start":112}},{"range":{"end":322,"start":287}},{"range":{"end":421,"start":382}},{"range":{"end":882,"start":860}},{"range":{"end":959,"start":933}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02249"},{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"},{"name":"ldb1","uniquename":"SJAG_02255"},{"name":"sqs1","uniquename":"SJAG_02256"},{"name":"wsc1","uniquename":"SJAG_02258"},{"uniquename":"SJAG_02260"},{"name":"myh1","uniquename":"SJAG_02261"}],"genes_by_uniquename":{"HGNC:11110":null,"HGNC:18040":null,"SJAG_02254":null,"SPBC30B4.04c":null,"YPL016W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ARID/BRIGHT DNA binding domain","id":"PF01388","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":273,"start":190}],"match_end":273,"match_start":190,"name":"ARID"},{"dbname":"CDD","description":"ARID_Swi1p-like","id":"cd16871","locations":[{"end":274,"start":188}],"match_end":274,"match_start":188,"name":"ARID_Swi1p-like"},{"dbname":"PROSITE_PROFILES","description":"ARID domain profile.","id":"PS51011","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":277,"start":187}],"match_end":277,"match_start":187,"name":"ARID"},{"dbname":"SMART","id":"SM01014","locations":[{"end":273,"start":184}],"match_end":273,"match_start":184,"name":"ARID_2"},{"dbname":"SMART","id":"SM00501","interpro_description":"ARID DNA-binding domain","interpro_id":"IPR001606","interpro_name":"ARID_dom","locations":[{"end":278,"start":188}],"match_end":278,"match_start":188,"name":"bright_3"},{"dbname":"SUPERFAMILY","id":"SSF46774","interpro_description":"ARID DNA-binding domain superfamily","interpro_id":"IPR036431","interpro_name":"ARID_dom_sf","locations":[{"end":288,"start":182}],"match_end":288,"match_start":182,"name":"ARID-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.150.60","interpro_description":"ARID DNA-binding domain superfamily","interpro_id":"IPR036431","interpro_name":"ARID_dom_sf","locations":[{"end":296,"start":179}],"match_end":296,"match_start":179},{"dbname":"PANTHER","id":"PTHR13964","interpro_description":"AT-rich Interactive Domain/SWI1 Chromatin Remodeling","interpro_id":"IPR051232","interpro_name":"ARID/SWI1_ChromRemod","locations":[{"end":928,"start":20}],"match_end":928,"match_start":20,"name":"RBP-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":142,"start":115},{"end":313,"start":288}],"match_end":313,"match_start":115,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":94,"start":1},{"end":186,"start":112},{"end":322,"start":287},{"end":421,"start":382},{"end":882,"start":860},{"end":959,"start":933}],"match_end":959,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":141,"start":123},{"end":322,"start":297},{"end":953,"start":943}],"match_end":953,"match_start":123,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":57,"start":26},{"end":94,"start":84},{"end":153,"start":142}],"match_end":153,"match_start":26,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":341476,"start_pos":338597,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":24,"start":11}},{"range":{"end":140,"start":122}},{"range":{"end":288,"start":274}},{"range":{"end":313,"start":296}},{"range":{"end":324,"start":315}},{"range":{"end":367,"start":344}},{"range":{"end":411,"start":392}},{"range":{"end":436,"start":427}},{"range":{"end":608,"start":596}},{"range":{"end":958,"start":937}}],"name":"sol1","ortholog_annotations":[{"gene_uniquename":"SJAG_02254","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11110","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02254","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18040","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02254","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC30B4.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02254","ortholog_taxonid":4932,"ortholog_uniquename":"YPL016W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02254","ortholog_taxonid":4932,"ortholog_uniquename":"YPL016W","reference_uniquename":"PMID:26896847"}],"product":"SWI/SNF complex subunit Sol1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000976"]}},"subset_termids":["GO:0005634","GO:0005694","GO:0006325","GO:0006355","GO:0006351","MONDO:0000426"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000976":null,"GO:0016514":null,"GO:0045815":null,"GO:0045944":null,"MONDO:0007617":null,"MONDO:0013819":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02254.1"],"transcripts_by_uniquename":{"SJAG_02254.1":null},"uniprot_identifier":"B6K1Z2","uniquename":"SJAG_02254"}


id: SJAG_02255
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77130],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[77127],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[108835],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[77128],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[77131],"is_not":false,"summary":null,"term":"GO:0005667"}],"molecular_function":[{"annotations":[77129],"is_not":false,"summary":null,"term":"GO:0003712"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02255","InterPro:IPR029005","EnsemblGenomes-Tr:EEB07174","UniProtKB/TrEMBL:B6K1Z3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":382,"start":263}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nop9","uniquename":"SJAG_02250"},{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"},{"name":"ldb1","uniquename":"SJAG_02255"},{"name":"sqs1","uniquename":"SJAG_02256"},{"name":"wsc1","uniquename":"SJAG_02258"},{"uniquename":"SJAG_02260"},{"name":"myh1","uniquename":"SJAG_02261"},{"name":"rmi1","uniquename":"SJAG_02262"}],"genes_by_uniquename":{"HGNC:6532":null,"HGNC:6533":null,"SJAG_02255":null,"SPBC30B4.03c":null,"YDL233W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LIM-domain binding protein","id":"PF01803","interpro_description":"LIM-domain binding protein/SEUSS","interpro_id":"IPR029005","interpro_name":"LIM-bd/SEUSS","locations":[{"end":239,"start":23}],"match_end":239,"match_start":23,"name":"LIM_bind"},{"dbname":"PANTHER","id":"PTHR10378","interpro_description":"LIM-domain binding protein/SEUSS","interpro_id":"IPR029005","interpro_name":"LIM-bd/SEUSS","locations":[{"end":367,"start":19}],"match_end":367,"match_start":19,"name":"LIM DOMAIN-BINDING PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":382,"start":263}],"match_end":382,"match_start":263,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":301,"start":272},{"end":336,"start":322}],"match_end":336,"match_start":272,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":343827,"start_pos":342679,"strand":"forward"},"name":"ldb1","ortholog_annotations":[{"gene_uniquename":"SJAG_02255","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6532","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02255","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6533","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02255","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC30B4.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02255","ortholog_taxonid":4932,"ortholog_uniquename":"YDL233W","reference_uniquename":"PMID:29761456"}],"product":"LIM domain binding protein, transcription coregulator","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003712"]}},"subset_termids":["GO:0006351","GO:0060090","GO:0005634","GO:0006355","GO:0003712"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0003712":null,"GO:0005634":null,"GO:0005667":null,"GO:0005737":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02255.1"],"transcripts_by_uniquename":{"SJAG_02255.1":null},"uniprot_identifier":"B6K1Z3","uniquename":"SJAG_02255"}


id: SJAG_02256
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108834],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[108832],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71663],"is_not":false,"summary":null,"term":"GO:0005634"}],"mondo":[{"annotations":[87530],"is_not":false,"summary":null,"term":"MONDO:0014936"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_02256","UniProtKB/TrEMBL:B6K1Z4","EnsemblGenomes-Tr:EEB07175","InterPro:IPR001374","InterPro:IPR034082","InterPro:IPR000467","GOA:B6K1Z4","InterPro:IPR036867"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":161,"start":68}},{"range":{"end":379,"start":284}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02251"},{"name":"ace2","uniquename":"SJAG_02252"},{"name":"ubi3","uniquename":"SJAG_02253"},{"name":"sol1","uniquename":"SJAG_02254"},{"name":"ldb1","uniquename":"SJAG_02255"},{"name":"sqs1","uniquename":"SJAG_02256"},{"name":"wsc1","uniquename":"SJAG_02258"},{"uniquename":"SJAG_02260"},{"name":"myh1","uniquename":"SJAG_02261"},{"name":"rmi1","uniquename":"SJAG_02262"},{"name":"asc1","uniquename":"SJAG_02263"}],"genes_by_uniquename":{"HGNC:11183":null,"HGNC:24684":null,"SJAG_02256":null,"SPBC30B4.02c":null,"YNL224C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"G-patch domain","id":"PF01585","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":727,"start":685}],"match_end":727,"match_start":685,"name":"G-patch"},{"dbname":"PFAM","description":"R3H domain","id":"PF01424","interpro_description":"R3H domain","interpro_id":"IPR001374","interpro_name":"R3H_dom","locations":[{"end":635,"start":577}],"match_end":635,"match_start":577,"name":"R3H"},{"dbname":"CDD","description":"R3H_G-patch","id":"cd02646","interpro_description":"Protein SQS1, R3H domain","interpro_id":"IPR034082","interpro_name":"R3H_G-patch","locations":[{"end":635,"start":580}],"match_end":635,"match_start":580,"name":"R3H_G-patch"},{"dbname":"PROSITE_PROFILES","description":"G-patch domain profile.","id":"PS50174","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":728,"start":684}],"match_end":728,"match_start":684,"name":"G_PATCH"},{"dbname":"PROSITE_PROFILES","description":"R3H domain profile.","id":"PS51061","interpro_description":"R3H domain","interpro_id":"IPR001374","interpro_name":"R3H_dom","locations":[{"end":637,"start":575}],"match_end":637,"match_start":575,"name":"R3H"},{"dbname":"SMART","id":"SM00443","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":728,"start":682}],"match_end":728,"match_start":682,"name":"G-patch_5"},{"dbname":"SMART","id":"SM00393","interpro_description":"R3H domain","interpro_id":"IPR001374","interpro_name":"R3H_dom","locations":[{"end":636,"start":558}],"match_end":636,"match_start":558,"name":"R3H_4"},{"dbname":"SUPERFAMILY","id":"SSF82708","interpro_description":"R3H domain superfamily","interpro_id":"IPR036867","interpro_name":"R3H_dom_sf","locations":[{"end":636,"start":577}],"match_end":636,"match_start":577,"name":"R3H domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.1370.50","interpro_description":"R3H domain superfamily","interpro_id":"IPR036867","interpro_name":"R3H_dom_sf","locations":[{"end":639,"start":572}],"match_end":639,"match_start":572},{"dbname":"PANTHER","id":"PTHR14195","interpro_description":"Splicing-associated domain-containing protein","interpro_id":"IPR051189","interpro_name":"Splicing_assoc_domain","locations":[{"end":727,"start":4}],"match_end":727,"match_start":4,"name":"G PATCH DOMAIN CONTAINING PROTEIN 2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":161,"start":68},{"end":379,"start":284}],"match_end":379,"match_start":68,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":321,"start":310},{"end":377,"start":366}],"match_end":377,"match_start":310,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":106,"start":78},{"end":158,"start":134},{"end":356,"start":341}],"match_end":356,"match_start":78,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":339,"start":330}],"match_end":339,"match_start":330,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":347026,"start_pos":344840,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":71,"start":56}},{"range":{"end":181,"start":174}},{"range":{"end":288,"start":267}},{"range":{"end":331,"start":308}},{"range":{"end":383,"start":358}},{"range":{"end":466,"start":454}},{"range":{"end":488,"start":471}},{"range":{"end":558,"start":524}}],"name":"sqs1","ortholog_annotations":[{"gene_uniquename":"SJAG_02256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11183","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24684","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02256","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC30B4.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_02256","ortholog_taxonid":4932,"ortholog_uniquename":"YNL224C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_02256","ortholog_taxonid":4932,"ortholog_uniquename":"YNL224C","reference_uniquename":"PMID:26896847"}],"product":"R3H and G-patch domain protein Sqs1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0042254","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006364":null,"MONDO:0014936":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_02256.1"],"transcripts_by_uniquename":{"SJAG_02256.1":null},"uniprot_identifier":"B6K1Z4","uniquename":"SJAG_02256"}


