# terms

id: PBO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-4","termid":"PBO:0052848"}


id: GO:0051194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cofactor metabolic process (obsolete GO:0051194)","synonyms":[{"name":"activation of cofactor metabolic process","type":"narrow"},{"name":"positive regulation of cofactor metabolism","type":"exact"},{"name":"stimulation of cofactor metabolic process","type":"narrow"},{"name":"up regulation of cofactor metabolic process","type":"exact"},{"name":"up-regulation of cofactor metabolic process","type":"exact"},{"name":"upregulation of cofactor metabolic process","type":"exact"}],"termid":"GO:0051194"}


id: MONDO:0800383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 34","secondary_identifiers":["MEDGEN:1612206","UMLS:C4539386"],"synonyms":[{"name":"JBTS34","type":"exact"}],"termid":"MONDO:0800383","xrefs":{"Monarch":{"xref_id":"0800383"}}}


id: MONDO:1011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, non-human animal","secondary_identifiers":["OMIA:001094"],"termid":"MONDO:1011779","xrefs":{"Monarch":{"xref_id":"1011779"}}}


id: PBO:0074595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 8","termid":"PBO:0074595"}


id: GO:0007351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Subdivision of the embryo along the anterior/posterior axis into anterior, posterior and terminal regions.","definition_xrefs":["ISBN:0879694238","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tripartite regional subdivision","termid":"GO:0007351"}


id: PBO:0012225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin","termid":"PBO:0012225"}


id: PR:Q9P7C9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhm1 gene.","definition_xrefs":["UniProtKB:Q9P7C9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7GpppX diphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.20","synonyms":[{"name":"Hint-related 7meGMP-directed hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nhm1","type":"exact"},{"name":"nuclear histidine triad (HIT) motif protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"scavenger mRNA-decapping enzyme DcpS (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7C9"}


id: FYPO:0004134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to diethyl maleate","synonyms":[{"name":"decreased RNA accumulation during cellular response to diethyl maleate","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"exact"},{"name":"decreased RNA level during cellular response to diethyl maleate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to diethyl maleate during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased transcript level during cellular response to diethyl maleate","type":"exact"},{"name":"reduced RNA level during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0004134"}


id: PBO:0062426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 86 pseudogene","termid":"PBO:0062426"}


id: PBO:0066043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B, member of RAS oncogene family","termid":"PBO:0066043"}


id: PBO:0034298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_distributary_of","termid":"PBO:0034298"}


id: MONDO:0010119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Glanzmann's thrombasthenia (obsolete MONDO:0010119)","secondary_identifiers":["NANDO:2200664","NANDO:2200657"],"termid":"MONDO:0010119","xrefs":{"Monarch":{"xref_id":"0010119"}}}


id: GO:0046417
data:
  {"annotated_genes":["SJAG_00337","SJAG_03580","SJAG_00518","SJAG_03485","SJAG_00224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91457,101616,94950,90194,114480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009423"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving chorismate, the anion of (3R-trans)-3-((1-carboxyethenyl)oxy)-4-hydroxy-1,5-cyclohexadiene-1-carboxylic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_00337":null,"SJAG_00518":null,"SJAG_03485":null,"SJAG_03580":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"chorismate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chorismate metabolism","type":"exact"}],"termid":"GO:0046417","terms_by_termid":{"GO:0009423":null}}


id: PBO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript, alternative start","termid":"PBO:0002214"}


id: MONDO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma of the penis with an indolent clinical course. It is usually superficial and arises from the shaft and rarely the glans.","definition_xrefs":["NCIT:C39961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"penis basal cell carcinoma","secondary_identifiers":["DOID:4277","UMLS:C1518949","MEDGEN:275349"],"synonyms":[{"name":"basal cell carcinoma of the penis","type":"exact"},{"name":"penile basal cell cancer","type":"exact"},{"name":"penile basal cell carcinoma","type":"exact"},{"name":"penis skin basal cell carcinoma","type":"exact"},{"name":"skin basal cell carcinoma of penis","type":"exact"},{"name":"skin of penis skin basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002935","xrefs":{"Monarch":{"xref_id":"0002935"}}}


id: GO:0005496
data:
  {"annotated_genes":["SJAG_03718","SJAG_01590","SJAG_01329","SJAG_00054","SJAG_01407","SJAG_04018","SJAG_02323","SJAG_01722","SJAG_02375","SJAG_02982","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94999],"is_not":false,"summary":null,"term":"GO:0005496"},{"annotations":[116614,71378,108588,94611,111719,72589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"},{"annotations":[90781,64018,77316,62382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032934"}]},"cv_name":"molecular_function","definition":"Binding to a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02982":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"steroid binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005496","terms_by_termid":{"GO:0005496":null,"GO:0008142":null,"GO:0032934":null}}


id: MONDO:0000344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Ross River virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ross river fever","secondary_identifiers":["DOID:0050518","SCTID:602001","UMLS:C0919833","MEDGEN:1673033"],"synonyms":[{"name":"Ross River virus caused disease or disorder","type":"exact"},{"name":"Ross River virus disease","type":"exact"},{"name":"Ross River virus disease or disorder","type":"exact"},{"name":"Ross River virus infectious disease","type":"exact"}],"termid":"MONDO:0000344","xrefs":{"Monarch":{"xref_id":"0000344"}}}


id: GO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cellular extravasation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"positively_regulates","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular extravasation","synonyms":[{"name":"activation of cellular extravasation","type":"narrow"},{"name":"stimulation of cellular extravasation","type":"narrow"},{"name":"up regulation of cellular extravasation","type":"exact"},{"name":"up-regulation of cellular extravasation","type":"exact"},{"name":"upregulation of cellular extravasation","type":"exact"}],"termid":"GO:0002693"}


id: FYPO:0003831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the cytokinesis after mitosis checkpoint does not occur. The cytokinesis after mitosis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis checkpoint","termid":"FYPO:0003830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000298","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished response to cytokinesis checkpoint signaling","synonyms":[{"name":"abolished cytokinesis after mitosis checkpoint","type":"related"},{"name":"abolished cytokinesis checkpoint activation","type":"related"},{"name":"abolished cytokinesis checkpoint arrest","type":"related"},{"name":"abolished response to cytokinesis after mitosis checkpoint signaling","type":"exact"},{"name":"abolished response to mitotic cell cycle cytokinesis checkpoint signaling","type":"exact"},{"name":"cell cycle arrest resulting from cytokinesis checkpoint activation abolished","type":"exact"}],"termid":"FYPO:0003831"}


id: PBO:0053282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens intrinsic membrane protein 2","termid":"PBO:0053282"}


id: PBO:0030756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030756"}


id: PBO:0050124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 34","termid":"PBO:0050124"}


id: GO:1901051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of atropine. Atropine is the racemic mixture of hyoscyamine.","definition_xrefs":["PMID:2879005","GOC:yaf","GOC:TermGenie","PMID:33572199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"atropine biosynthetic process","secondary_identifiers":["GO:1901049"],"synonyms":[{"name":"atropine anabolism","type":"exact"},{"name":"atropine biosynthesis","type":"exact"},{"name":"atropine formation","type":"exact"},{"name":"atropine metabolic process","type":"broad"},{"name":"atropine metabolism","type":"broad"},{"name":"atropine synthesis","type":"exact"},{"name":"hyoscyamine biosynthetic process","type":"exact"}],"termid":"GO:1901051"}


id: GO:0032060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bleb, a cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Plasma membrane blebbing occurs during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["Wikipedia:Bleb_(cell_biology)","GOC:mah","PMID:12083798","GOC:mtg_apoptosis","PMID:16624291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"bleb assembly","synonyms":[{"name":"blebbing","type":"broad"},{"name":"cell blebbing","type":"exact"},{"name":"membrane blebbing","type":"broad"},{"name":"plasma membrane bleb assembly","type":"exact"},{"name":"plasma membrane blebbing","type":"exact"}],"termid":"GO:0032060"}


id: PBO:0049009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate isomerase","termid":"PBO:0049009"}


id: GO:0033938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6) linkages between alpha-L-fucose and N-acetyl-D-glucosamine in glycopeptides such as immunoglobulin G glycopeptide and fucosyl-asialo-agalacto-fetuin.","definition_xrefs":["EC:3.2.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-L-fucosidase activity","termid":"GO:0004560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"1,6-alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.127-RXN"],"synonyms":[{"name":"1,6-L-fucosyl-N-acetyl-D-glucosaminylglycopeptide fucohydrolase activity","type":"related"}],"termid":"GO:0033938"}


id: PBO:0028265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding_during_cellular_response_to_rapamycin","termid":"PBO:0028265"}


id: MONDO:0017122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic syndrome with corpus callosum agenesis/dysgenesis as a major feature (obsolete MONDO:0017122)","secondary_identifiers":["Orphanet:269573"],"termid":"MONDO:0017122","xrefs":{"Monarch":{"xref_id":"0017122"}}}


id: PBO:0090471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup120","termid":"PBO:0090471"}


id: MONDO:0012174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral cone dystrophy","secondary_identifiers":["MEDGEN:323031","UMLS:C1836946","OMIM:609021","MESH:C563813"],"synonyms":[{"name":"peripheral cone dystrophy","type":"exact"}],"termid":"MONDO:0012174","xrefs":{"Monarch":{"xref_id":"0012174"}}}


id: PBO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase (predicted)","termid":"PBO:0005735"}


id: GO:0032168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane within hyphae of filamentous fungi at sites where a septum will form; composed of septins as well as septin-associated proteins.","definition_xrefs":["PMID:16151244","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"hyphal septin ring","termid":"GO:0032168"}


id: MONDO:0004688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sideroblastic anemia (obsolete MONDO:0004688)","termid":"MONDO:0004688","xrefs":{"Monarch":{"xref_id":"0004688"}}}


id: PBO:0045180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 peudogene 2","termid":"PBO:0045180"}


id: FYPO:0003856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to FR901464. Cells stop growing (and may die) at a concentration of FR901464 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to FR901464","synonyms":[{"name":"hypersensitive to FR901464","type":"exact"},{"name":"sensitive to FR901464 during mitotic cell cycle","type":"related"},{"name":"sensitive to FR901464 during vegetative growth","type":"exact"}],"termid":"FYPO:0003856"}


id: PBO:0044972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 9","termid":"PBO:0044972"}


id: GO:0043738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanophenazine + reduced coenzyme F420 = dihydromethanophenazine + coenzyme F420.","definition_xrefs":["RHEA:54752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"reduced coenzyme F420 dehydrogenase activity","secondary_identifiers":["EC:1.5.98.3","MetaCyc:RXN-8106"],"synonyms":[{"name":"1,5-dihydrocoenzyme F420 dehydrogenase activity","type":"exact"},{"name":"F420H2 dehydrogenase activity","type":"exact"}],"termid":"GO:0043738"}


id: GO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of phospho-guanosine to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein guanylylation","synonyms":[{"name":"protein amino acid guanylylation","type":"exact"}],"termid":"GO:0018260"}


id: PR:O42649
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18937:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.09c","secondary_identifiers":["UniProtKB:O42649"],"synonyms":[{"name":"SPAC10F6.09c","type":"related"},{"name":"Spom972h-SMC3","type":"exact"},{"name":"cohesin complex Psm3 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"smc3","type":"related"}],"termid":"PR:O42649"}


id: GO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, base subcomplex (obsolete GO:0031611)","termid":"GO:0031611"}


id: GO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a transmembrane ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023","GO:0016301","GO:0016740","GO:0003824","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"transmembrane-ephrin receptor activity","synonyms":[{"name":"transmembrane-Eph receptor activity","type":"exact"}],"termid":"GO:0005005"}


id: PBO:0035778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_prometaphase","termid":"PBO:0035778"}


id: GO:0044036
data:
  {"annotated_genes":["SJAG_04906","SJAG_04770","SJAG_04327","SJAG_00424","SJAG_01835","SJAG_02519","SJAG_04184","SJAG_01028","SJAG_01290","SJAG_03082","SJAG_01017","SJAG_04771","SJAG_01276","SJAG_01264","SJAG_01255","SJAG_01453","SJAG_02192","SJAG_04462","SJAG_05001","SJAG_00218","SJAG_02222","SJAG_00816","SJAG_01021","SJAG_01288","SJAG_04668","SJAG_04659","SJAG_04666","SJAG_00598","SJAG_00610","SJAG_03646","SJAG_04864","SJAG_03057","SJAG_05285","SJAG_04483","SJAG_03587","SJAG_02916","SJAG_00876","SJAG_03705","SJAG_04236","SJAG_01787","SJAG_03123","SJAG_00667","SJAG_01171","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[73452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[77988,75169,79715,87854,80793,72461,78395,74940,77442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[100512,94381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[73961,71030,71852,73779,79021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[113552,76234,74881,73454,71306,91954,106480,116209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[103004,78618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[108446,95468,102305,102306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[107068,72853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071966"},{"annotations":[87869,92781],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[118300,106291,118430,91127,105717,103210,92765],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[89795,92787,103212,95305],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"part_of","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00598":null,"SJAG_00610":null,"SJAG_00667":null,"SJAG_00816":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01021":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02519":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03082":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04327":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04770":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_04906":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall macromolecule metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0010382"],"synonyms":[{"name":"cellular cell wall macromolecule metabolic process","type":"exact"},{"name":"cellular cell wall macromolecule metabolism","type":"exact"}],"termid":"GO:0044036","terms_by_termid":{"GO:0000032":null,"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MOD:00483
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with N-ethylmaleimide.","definition_xrefs":["OMSSA:83","PubMed:11813307","Unimod:108#C","PubMed:12777388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-ethylmaleimide derivatized cysteine","synonyms":[{"name":"N-ethylmaleimide on cysteines","type":"related"},{"name":"Nethylmaleimide","type":"related"},{"name":"nemc","type":"exact"}],"termid":"MOD:00483"}


id: PBO:0013816
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TOP2","termid":"PBO:0013816"}


id: GO:0039542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of K63-linked ubiquitination of RIG-I (also known as DDX58), thereby suppressing RIG-I signal transduction. Lys63-linked ubiquitination of the N-terminal CARD domains of RIG-I is crucial for the cytosolic RIG-I signaling pathway to elicit host antiviral innate immunity.","definition_xrefs":["PMID:21890623","PMID:19454348"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I K63-linked ubiquitination (obsolete GO:0039542)","synonyms":[{"name":"inhibition by virus of TRIM25-mediated ubiquitination of host RIG-I","type":"exact"},{"name":"inhibition by virus of host DDX58 K63-linked ubiquitination","type":"exact"},{"name":"inhibition by virus of host RIG-I activity by inhibition of RIG-I ubiquitination","type":"broad"}],"termid":"GO:0039542"}


id: GO:0050521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-alpha-D-glucosyl](n) + n ATP + n H2O = [(1->4)-6-phospho-alpha-D-glucosyl](n) + n AMP + 2n H+ + n phosphate.","definition_xrefs":["RHEA:11668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alpha-glucan, water dikinase activity","secondary_identifiers":["MetaCyc:2.7.9.4-RXN","EC:2.7.9.4"],"synonyms":[{"name":"ATP:alpha-glucan, water phosphotransferase activity","type":"related"},{"name":"GWD","type":"related"},{"name":"a-glucan, water dikinase activity","type":"exact"},{"name":"alpha-glucan,water dikinase activity","type":"related"},{"name":"starch-related R1 protein activity","type":"related"}],"termid":"GO:0050521"}


id: GO:0009107
data:
  {"annotated_genes":["SJAG_01271","SJAG_03553","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75508,97518,98222],"is_not":false,"summary":null,"term":"GO:0009107"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_03198":null,"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"lipoate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0009105"],"synonyms":[{"name":"lipoate anabolism","type":"exact"},{"name":"lipoate biosynthesis","type":"exact"},{"name":"lipoate formation","type":"exact"},{"name":"lipoate synthesis","type":"exact"},{"name":"lipoic acid anabolism","type":"exact"},{"name":"lipoic acid biosynthesis","type":"exact"},{"name":"lipoic acid biosynthetic process","type":"exact"},{"name":"lipoic acid formation","type":"exact"},{"name":"lipoic acid synthesis","type":"exact"}],"termid":"GO:0009107","terms_by_termid":{"GO:0009107":null}}


id: PBO:0051627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILRUN pseudogene 1","termid":"PBO:0051627"}


id: PBO:0090554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit","termid":"PBO:0090554"}


id: PBO:0091486
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glcoside Hydrolase family Sixteen","termid":"PBO:0091486"}


id: PBO:0073648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salt inducible kinase 2","termid":"PBO:0073648"}


id: GO:0045809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of competence for transformation","synonyms":[{"name":"activation of establishment of competence for transformation","type":"narrow"},{"name":"activator of the establishment of competence for transformation activity","type":"related"},{"name":"stimulation of establishment of competence for transformation","type":"narrow"},{"name":"up regulation of establishment of competence for transformation","type":"exact"},{"name":"up-regulation of establishment of competence for transformation","type":"exact"},{"name":"upregulation of establishment of competence for transformation","type":"exact"}],"termid":"GO:0045809"}


id: MONDO:0021097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises anywhere in the ductal system of the breast. It is characterized by fibrovascular structures lined by benign epithelial and myoepithelial proliferations. Intraductal breast papillomas are classified as central, when they arise in large ducts, or peripheral, when they arise in the terminal ductal lobular units.","definition_xrefs":["NCIT:C3863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"intraductal papilloma","termid":"MONDO:0002060"},{"relation_name":"is_a","term_name":"intraductal papillary breast neoplasm","termid":"MONDO:0002061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast papilloma","secondary_identifiers":["SCTID:99571000119102","MEDGEN:65944","UMLS:C0238034","DOID:1626","SCTID:254848002"],"synonyms":[{"name":"breast duct papilloma","type":"related"},{"name":"breast papilloma","type":"exact"},{"name":"duct papilloma of breast","type":"exact"},{"name":"duct papilloma of the breast","type":"exact"},{"name":"ductal breast papilloma","type":"exact"},{"name":"intraductal breast papilloma","type":"exact"},{"name":"intraductal papilloma of breast","type":"exact"},{"name":"intraductal papilloma of the breast","type":"exact"},{"name":"mammary duct papilloma","type":"exact"},{"name":"papilloma of breast","type":"exact"},{"name":"papilloma of the breast","type":"exact"}],"termid":"MONDO:0021097","xrefs":{"Monarch":{"xref_id":"0021097"}}}


id: GO:0008438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphosphate + a purine nucleoside = phosphate + a purine mononucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-5-phosphate kinase (obsolete GO:0008438)","synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"exact"}],"termid":"GO:0008438"}


id: MONDO:0012648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of valine metabolism. The prevalence is unknown. Only one symptomatic patient (with anemia, failure to thrive, dilated cardiomyopathy and plasma carnitine deficiency) has been described so far, but several series of patients have been identified through newborn screening programs relying on detection of increased C(4)-carnitine levels by tandem mass spectrometry. The disorder is caused by mutations in the ACAD8 gene (11q25).","definition_xrefs":["Orphanet:79159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"isobutyryl-CoA dehydrogenase deficiency","secondary_identifiers":["MEDGEN:370754","MESH:C535541","NCIT:C129975","OMIM:611283","GARD:10223","UMLS:C1969809"],"synonyms":[{"name":"Acad8 deficiency","type":"related"},{"name":"IBD deficiency","type":"related"},{"name":"acyl-Coa dehydrogenase family, member 8, deficiency of","type":"related"},{"name":"acyl-CoaA dehydrogenase family, member 8, deficiency of","type":"related"},{"name":"isobutyric aciduria","type":"exact"},{"name":"isobutyryl-CoA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0012648","xrefs":{"Monarch":{"xref_id":"0012648"}}}


id: GO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain region that is adjacent to the ventricular cavity.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:15157725","PMID:12593981","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}


id: MOD:00547
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:194","PubMed:14997490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","synonyms":[{"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","type":"related"},{"name":"AccQTag","type":"related"}],"termid":"MOD:00547"}


id: FYPO:0004351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0004351"}


id: MONDO:0028737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biliary atresia disorder (obsolete MONDO:0028737)","secondary_identifiers":["HP:0005912","NANDO:1200913","Orphanet:498345","NANDO:2200930"],"termid":"MONDO:0028737","xrefs":{"Monarch":{"xref_id":"0028737"}}}


id: PBO:0046009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 4","termid":"PBO:0046009"}


id: MONDO:0012761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q29 microduplication is a chromosomal abnormality associated with variable clinical findings including mild or moderate intellectual deficit and microcephaly.","definition_xrefs":["PMID:18241066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 3","termid":"MONDO:0016954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3q29 microduplication syndrome","secondary_identifiers":["DECIPHER:77","DOID:0060459","UMLS:C2749873","SCTID:717973004","Orphanet:251038","OMIM:611936","MEDGEN:440897","GARD:10360","MESH:C567626"],"synonyms":[{"name":"3q29 microduplication","type":"exact"},{"name":"3q29 microduplication syndrome","type":"exact"},{"name":"chromosome 3q29 DUPLICATION syndrome","type":"related"},{"name":"microduplication 3Q29 syndrome","type":"related"},{"name":"trisomy 3q29","type":"exact"}],"termid":"MONDO:0012761","xrefs":{"Monarch":{"xref_id":"0012761"}}}


id: PBO:0046531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 44","termid":"PBO:0046531"}


id: PBO:0059024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 13","termid":"PBO:0059024"}


id: GO:1900694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of (+)-kotanin biosynthetic process","termid":"GO:1900692"},{"relation_name":"positively_regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"activation of (+)-kotanin anabolism","type":"exact"},{"name":"activation of (+)-kotanin biosynthesis","type":"exact"},{"name":"activation of (+)-kotanin biosynthetic process","type":"narrow"},{"name":"activation of (+)-kotanin formation","type":"exact"},{"name":"activation of (+)-kotanin synthesis","type":"exact"},{"name":"positive regulation of (+)-kotanin anabolism","type":"exact"},{"name":"positive regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"positive regulation of (+)-kotanin formation","type":"exact"},{"name":"positive regulation of (+)-kotanin synthesis","type":"exact"},{"name":"up regulation of (+)-kotanin anabolism","type":"exact"},{"name":"up regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"up regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"up regulation of (+)-kotanin formation","type":"exact"},{"name":"up regulation of (+)-kotanin synthesis","type":"exact"},{"name":"up-regulation of (+)-kotanin anabolism","type":"exact"},{"name":"up-regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"up-regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"up-regulation of (+)-kotanin formation","type":"exact"},{"name":"up-regulation of (+)-kotanin synthesis","type":"exact"},{"name":"upregulation of (+)-kotanin anabolism","type":"exact"},{"name":"upregulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"upregulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"upregulation of (+)-kotanin formation","type":"exact"},{"name":"upregulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900694"}


id: GO:0071367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to brassinosteroid","termid":"GO:0009741"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brassinosteroid stimulus","termid":"GO:0071367"}


id: GO:0072748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tacrolimus (FK506) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tacrolimus","termid":"GO:1901327"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tacrolimus","synonyms":[{"name":"cellular response to FK506","type":"exact"},{"name":"cellular response to tacrolimus hydrate","type":"exact"}],"termid":"GO:0072748"}


id: MOD:01819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-succinyl-L-lysine.","definition_xrefs":["PubMed:21151122","PubMed:16582421","RESID:AA0545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-succinyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(3-carboxypropanoyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(3-carboxypropanoyl)azanyl]hexanoic acid","type":"exact"},{"name":"4-[[(5S)-5-amino-6-hydroxy-6-oxohexyl]amino]-4-oxobutanoate","type":"exact"},{"name":"MOD_RES N6-succinyllysine","type":"exact"},{"name":"N(epsilon)-(succinyl)lysine","type":"exact"},{"name":"N6-succinyl-L-lysine","type":"exact"},{"name":"succinyllysine","type":"exact"}],"termid":"MOD:01819"}


id: PBO:0086021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0086021"}


id: PBO:0054119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1485","termid":"PBO:0054119"}


id: PBO:0068338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF103-CHMP3 readthrough","termid":"PBO:0068338"}


id: PBO:0052196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M regulatory beta subunit 4","termid":"PBO:0052196"}


id: SO:0000814
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region's ability, when introduced to a mutant organism, to re-establish (rescue) a phenotype.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue","termid":"SO:0000814"}


id: PBO:0052989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 1","termid":"PBO:0052989"}


id: MONDO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic adipsic hypernatraemia syndrome","secondary_identifiers":["NANDO:2200325","UMLS:C5681196","MEDGEN:1814472","Orphanet:443101","GARD:21850"],"termid":"MONDO:0018620","xrefs":{"Monarch":{"xref_id":"0018620"}}}


id: GO:0008874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = 5-dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gluconate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:GLUCONATE-5-DEHYDROGENASE-RXN"],"synonyms":[{"name":"5-keto-D-gluconate 5-reductase activity","type":"related"},{"name":"5-keto-D-gluconate reductase","type":"related"},{"name":"5-ketogluconate 5-reductase activity","type":"related"},{"name":"5-ketogluconate reductase activity","type":"related"},{"name":"D-gluconate:NAD(P)+ 5-oxidoreductase","type":"related"}],"termid":"GO:0008874"}


id: PBO:0047753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, beta","termid":"PBO:0047753"}


id: GO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indolepyruvate = CO2 + indole acetaldehyde.","definition_xrefs":["EC:4.1.1.74","MetaCyc:4.1.1.74-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"indolepyruvate decarboxylase activity","secondary_identifiers":["RHEA:18017"],"synonyms":[{"name":"3-(indol-3-yl)pyruvate carboxy-lyase [(2-indol-3-yl)acetaldehyde-forming]","type":"related"},{"name":"3-(indol-3-yl)pyruvate carboxy-lyase activity","type":"related"},{"name":"indol-3-yl-pyruvate carboxy-lyase activity","type":"related"},{"name":"indole-3-pyruvate decarboxylase activity","type":"related"}],"termid":"GO:0047434"}


id: PBO:0064723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 59","termid":"PBO:0064723"}


id: MONDO:0015372
data:
  {"annotated_genes":["SJAG_04621","SJAG_04387","SJAG_04003","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[87315,87316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[85518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"}]},"cv_name":"mondo","definition":"This syndrome is characterized by congenital thrombocytopenia associated with the presence of large platelets.","definition_xrefs":["Orphanet:140957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"autosomal dominant macrothrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4304021","GARD:16965","MEDGEN:929690","SCTID:720521008"],"termid":"MONDO:0015372","terms_by_termid":{"MONDO:0014078":null,"MONDO:0030827":null,"MONDO:0800047":null},"xrefs":{"Monarch":{"xref_id":"0015372"}}}


id: MONDO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the spine in which the continuity of a vertebral bone is broken. Symptoms include back pain and difficulty bending and twisting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"},{"relation_name":"is_a","term_name":"spinal injury","termid":"MONDO:0037747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal fracture","secondary_identifiers":["MESH:D016103","SCTID:50448004","EFO:0003902"],"synonyms":[{"name":"bone fracture of vertebral column","type":"exact"},{"name":"vertebral column bone fracture","type":"exact"}],"termid":"MONDO:0005309","xrefs":{"Monarch":{"xref_id":"0005309"}}}


id: FYPO:0006270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to phosphate starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to phosphate starvation","termid":"FYPO:0003195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to phosphate starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"increased RNA level during cellular response to phosphate depletion","type":"exact"},{"name":"increased RNA level during cellular response to phosphate deprivation","type":"exact"},{"name":"increased RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during phosphate starvation","type":"exact"},{"name":"increased mRNA level during cellular response to phosphate starvation","type":"narrow"},{"name":"increased transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006270"}


id: MOD:01659
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate, Uniblue A.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uniblue A derivatized residue","synonyms":[{"name":"1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid","type":"exact"},{"name":"1-amino-9,10-dioxo-4-{[3-(vinylsulfonyl)phenyl]amino}-9,10-dihydroanthracene-2-sulfonic acid","type":"exact"},{"name":"Uniblue A","type":"exact"},{"name":"UniblueARes","type":"exact"}],"termid":"MOD:01659"}


id: MONDO:0017520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"symbrachydactyly of hands and feet","termid":"MONDO:0015516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbrachydactyly of hand and foot, bilateral","secondary_identifiers":["Orphanet:295138","UMLS:C2919807","MEDGEN:754111"],"termid":"MONDO:0017520","xrefs":{"Monarch":{"xref_id":"0017520"}}}


id: PBO:0057780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2682","termid":"PBO:0057780"}


id: PBO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to regulate endocytosis of plasma membrane proteins; regulates by recruiting the ubiquitin ligase Rsp5p to its target in the plasma membrane; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086098"}


id: GO:0009346
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Citrate lyase is a multienzyme complex with three constituents: the alpha subunit, citrate-ACP transferase; the beta subunit, citryl-ACP lyase; and the gamma subunit, an acyl-carrier protein which also carries the prosthetic group components. All three subunits are required for citrate lyase enzyme activity. This enzyme has only been found in bacteria.","definition_xrefs":["PMID:32302313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATP-independent citrate lyase complex","secondary_identifiers":["MetaCyc:ACECITLY-CPLX"],"synonyms":[{"name":"citrate lyase complex","type":"broad"},{"name":"citrate synthase complex","type":"broad"}],"termid":"GO:0009346"}


id: GO:0051803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051803)","synonyms":[{"name":"down regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"negative regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051803"}


id: MONDO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder adenocarcinoma","termid":"MONDO:0002751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder colloid adenocarcinoma","secondary_identifiers":["UMLS:C1511193","NCIT:C39837","DOID:3710","MEDGEN:267373"],"synonyms":[{"name":"bladder mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0002750","xrefs":{"Monarch":{"xref_id":"0002750"}}}


id: PBO:0065736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxidasin like","termid":"PBO:0065736"}


id: GO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: PATO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color brightness which is relatively low.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color brightness","termid":"PATO:0000016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low brightness","synonyms":[{"name":"dark","type":"exact"}],"termid":"PATO:0000327"}


id: PBO:0044982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 34","termid":"PBO:0044982"}


id: PBO:0030765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_vegetative_growth","termid":"PBO:0030765"}


id: PBO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5 (predicted)","termid":"PBO:0002079"}


id: PBO:0050116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 26","termid":"PBO:0050116"}


id: PBO:0003487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.13.11.-","termid":"PBO:0003487"}


id: PBO:0074724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80D","termid":"PBO:0074724"}


id: MONDO:0019369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complex regional pain syndrome (CRPS) is a rare neurologic disease painful progressive condition that corresponds to a group of disorders characterized by a disproportionate spontaneous or stimulus-induced pain, accompanied by a variably mixed myriad of autonomic and motor disorders including symptoms such as swelling, allodynia, skin blood supply and trophic disturbances. CRPS most often affects one of the arms, legs, hands, or feet and usually occurs after an injury or trauma to that limb.","definition_xrefs":["Orphanet:83452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pain syndrome","termid":"MONDO:0024317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex regional pain syndrome","secondary_identifiers":["GARD:4647","NORD:1652","MedDRA:10064332","UMLS:C0458219","icd11.foundation:1834504950","EFO:1001998","MESH:D020918","SCTID:128200000","MEDGEN:96846","DOID:3223"],"synonyms":[{"name":"CRPS","type":"related"},{"name":"Complex regional pain syndromes","type":"exact"},{"name":"reflex sympathetic dystrophy","type":"related"}],"termid":"MONDO:0019369","xrefs":{"Monarch":{"xref_id":"0019369"}}}


id: MONDO:0021542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of choroid","termid":"MONDO:0021487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hemangioma of choroid","secondary_identifiers":["ICD9:228.09","NCIT:C4562","SCTID:255022003","UMLS:C0346390","MEDGEN:83424"],"synonyms":[{"name":"angioma of choroid","type":"exact"},{"name":"angioma of the choroid","type":"exact"},{"name":"benign angioma of choroid","type":"exact"},{"name":"benign angioma of the choroid","type":"exact"},{"name":"benign choroid angioma","type":"exact"},{"name":"benign choroid hemangioma","type":"exact"},{"name":"benign hemangioma of choroid","type":"exact"},{"name":"benign hemangioma of the choroid","type":"exact"},{"name":"choroid angioma","type":"exact"},{"name":"choroid hemangioma","type":"exact"},{"name":"hemangioma of optic choroid","type":"exact"},{"name":"hemangioma of the choroid","type":"exact"},{"name":"hemangioma, choroid, benign","type":"exact"},{"name":"optic choroid hemangioma","type":"exact"}],"termid":"MONDO:0021542","xrefs":{"Monarch":{"xref_id":"0021542"}}}


id: GO:0008194
data:
  {"annotated_genes":["SJAG_04881","SJAG_02222","SJAG_00442","SJAG_04821","SJAG_02804","SJAG_01028","SJAG_03066","SJAG_03587","SJAG_04236","SJAG_02916","SJAG_02913","SJAG_04184","SJAG_00183","SJAG_06383","SJAG_01288","SJAG_00129","SJAG_04571","SJAG_00394","SJAG_01531","SJAG_04119","SJAG_00876","SJAG_03057","SJAG_04868","SJAG_05285","SJAG_03311","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75078,76243,113553,80404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[101422,93708,79311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[73960,71851,79020,71029,73778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047657"},{"annotations":[116212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[74644,74818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[67122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[106140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"},{"annotations":[99039,63622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[111988,117631,77846,93357,108966,93448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"},{"annotations":[79930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.","definition_xrefs":["PMID:11846783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00183":null,"SJAG_00394":null,"SJAG_00442":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_02222":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_03587":null,"SJAG_04119":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_05285":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-glycosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162730"],"termid":"GO:0008194","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004100":null,"GO:0004577":null,"GO:0004581":null,"GO:0017176":null,"GO:0047220":null,"GO:0047657":null,"GO:0140752":null}}


id: PBO:0074122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 divergent transcript","termid":"PBO:0074122"}


id: MONDO:0012284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, progressive, with deafness","secondary_identifiers":["MESH:C563713","MEDGEN:322828","OMIM:609469","UMLS:C1836119"],"synonyms":[{"name":"Alport/focal segmental glomerulosclerosis-like syndrome","type":"related"},{"name":"Nede","type":"related"},{"name":"nephropathy, progressive, with deafness","type":"exact"}],"termid":"MONDO:0012284","xrefs":{"Monarch":{"xref_id":"0012284"}}}


id: PBO:0047417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 8","termid":"PBO:0047417"}


id: SO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group II intron that recognizes IBS1/EBS1 and IBS2/EBS2 for the 5-prime exon and IBS3/EBS3 for the 3-prime exon.","definition_xrefs":["PMID:20463000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"group_II_intron","termid":"SO:0000603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_IIB_intron","synonyms":[{"name":"group IIB intron","type":"exact"}],"termid":"SO:0000382"}


id: MOD:00382
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionyl-L-tyrosine dipeptide to form 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one.","definition_xrefs":["PubMed:11259412","RESID:AA0377","PubMed:10852900","PubMed:15491166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","synonyms":[{"name":"3-(2-methylsulfanyl)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-amino-3,6-didehydropyrazin-2-ol","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"GFP-like chromoprotein asFP595 chromophore","type":"exact"},{"name":"L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"}],"termid":"MOD:00382"}


id: GO:0090191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.","definition_xrefs":["GOC:yaf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090189"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090191"}


id: SO:1000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from guanine to cytidine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_C_transversion","synonyms":[{"name":"G to C transversion","type":"exact"}],"termid":"SO:1000026"}


id: PBO:0028867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_mRNA_level_during_vegetative_growth","termid":"PBO:0028867"}


id: MONDO:0012417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant form of heart-hand syndrome, first described in members of a Slovenian family, that is characterized by adult onset, progressive cardiac conduction disease, tachyarrhythmias that can lead to sudden death, dilated cardiomyopathy and brachydactyly, with the hands less severely affected than the feet. Muscle weakness and/or myopathic electromyographic findings have been observed in some cases.","definition_xrefs":["Orphanet:168796"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"heart-hand syndrome, Slovenian type","secondary_identifiers":["GARD:9846","icd11.foundation:1814304618","MEDGEN:341859","OMIM:610140","MESH:C535852","SCTID:721014007","UMLS:C1857829"],"synonyms":[{"name":"Cardiac conduction disease-dilated cardiomyopathy-brachydactyly syndrome","type":"exact"},{"name":"atriodigital dysplasia, Slovenian type","type":"exact"},{"name":"heart-hand syndrome, Slovenian type","type":"exact"}],"termid":"MONDO:0012417","xrefs":{"Monarch":{"xref_id":"0012417"}}}


id: GO:0102258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 1,3-diglyceride = a monoglyceride + a fatty acid.","definition_xrefs":["PMID:21477884","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3-diacylglycerol acylhydrolase activity (obsolete GO:0102258)","termid":"GO:0102258"}


id: GO:0009553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo sac over time, from its formation to the mature structure. The process begins with the meiosis of the megasporocyte to form four haploid megaspores. Three of the megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. The two polar nuclei fuse resulting in a mononucleate diploid endosperm mother cell. The three antipodal cells degenerate.","definition_xrefs":["GOC:mtg_plant","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac development","secondary_identifiers":["GO:0048230"],"synonyms":[{"name":"female gametophyte development","type":"exact"}],"termid":"GO:0009553"}


id: PBO:0113158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of modifier of aggregation-4 (MOAG-4) from worm and small EDRK-rich factor protein (SERF1a) from human; highly conserved enhancer of amyloid formation of Aβ40 and α-synuclein both in vitro and in vivo; protein displays very high degree of disorder, segment spanning residues 36E-65K has strong helical propensity","termid":"PBO:0113158"}


id: MOD:01471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (Z)-dehydrobutyrine.","definition_xrefs":["PubMed:3769923","DeltaMass:0","RESID:AA0182","PubMed:1547888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"(Z)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01471"}


id: GO:0180025
data:
  {"annotated_genes":["SJAG_01169","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113457,73372],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cytosolic small ribosomal subunit.","definition_xrefs":["PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal small subunit assembly","termid":"GO:0000028"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"cytosolic small ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0180025","terms_by_termid":{"GO:0034462":null}}


id: PBO:0058739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6863","termid":"PBO:0058739"}


id: PBO:0083697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsilon subunit of the F1 sector of mitochondrial F1F0 ATP synthase; which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0083697"}


id: GO:0050758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thymidylate synthase biosynthetic process (obsolete GO:0050758)","synonyms":[{"name":"regulation of thymidylate synthase anabolism","type":"exact"},{"name":"regulation of thymidylate synthase biosynthesis","type":"exact"},{"name":"regulation of thymidylate synthase formation","type":"exact"},{"name":"regulation of thymidylate synthase synthesis","type":"exact"}],"termid":"GO:0050758"}


id: GO:1905749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22869721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"regulation of endocytic recycling","termid":"GO:2001135"},{"relation_name":"regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"}


id: PBO:0044198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin G","termid":"PBO:0044198"}


id: GO:0000753
data:
  {"annotated_genes":["SJAG_02864","SJAG_02700","SJAG_02989","SJAG_01894","SJAG_01993","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98645,99256,114711,99338,88610,92874],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"}]},"cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo conjugation cellular fusion.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"cell morphogenesis involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007332"],"synonyms":[{"name":"shmoo orientation","type":"narrow"},{"name":"shmooing","type":"narrow"}],"termid":"GO:0000753","terms_by_termid":{"GO:1904600":null}}


id: PBO:0086446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosidase; GPI-anchored membrane protein required for cell wall biosynthesis in bud formation;homologous to Dfg5p","termid":"PBO:0086446"}


id: PBO:0063289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 3","termid":"PBO:0063289"}


id: PBO:0030476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_cysteine_level","termid":"PBO:0030476"}


id: GO:0120076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of endocardial cushion cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"negatively_regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endocardial cushion cell differentiation","termid":"GO:0120076"}


id: PBO:0049465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin C (Gerbich blood group)","termid":"PBO:0049465"}


id: GO:1905500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a heteroreceptor complex.","definition_xrefs":["GOC:pad","GO_REF:0000079","GOC:PARL","GOC:TermGenie","PMID:24157794"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroreceptor complex assembly (obsolete GO:1905500)","synonyms":[{"name":"heteroreceptor complex formation","type":"exact"}],"termid":"GO:1905500"}


id: GO:0060449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bud in the lung grows out from the point where it is formed.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud elongation involved in lung branching","termid":"GO:0060449"}


id: PBO:0088182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc cluster transcriptional activator; necessary for derepression of a variety of genes under non-fermentative growth conditions, active after diauxic shift, binds carbon source responsive elements; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0088182"}


id: FYECO:0000137
data:
  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id: MONDO:0003770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the meninges of the thoracic region of the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracic spinal canal and spinal cord meningioma","secondary_identifiers":["DOID:6103","NCIT:C5297","UMLS:C1336738","MEDGEN:234424"],"synonyms":[{"name":"meningioma of the thoracic spinal canal and spinal cord","type":"exact"},{"name":"meningioma of thoracic spinal canal and spinal cord","type":"exact"},{"name":"thoracic intraspinal meningioma","type":"exact"}],"termid":"MONDO:0003770","xrefs":{"Monarch":{"xref_id":"0003770"}}}


id: PBO:0049669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 1","termid":"PBO:0049669"}


id: PBO:0049573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 1","termid":"PBO:0049573"}


id: PBO:0066030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase activating protein 1","termid":"PBO:0066030"}


id: GO:0034823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellate + CoASH + ATP = citronellyl-CoA + AMP + PPi.","definition_xrefs":["UM-BBD_reactionID:r1157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"citronellyl-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R08088"],"termid":"GO:0034823"}


id: MONDO:1012626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive degenerative myeloencephalopathy that occurs in dogs due to a mutation in the PNPLA8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myeloencephalopathy, non-human animal","termid":"MONDO:1011866"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive degenerative myeloencephalopathy, PNPLA8-related, dog","secondary_identifiers":["OMIA:000827-9615"],"synonyms":[{"name":"hereditary ataxia, dog","type":"related"},{"name":"myeloencephalopathy, progressive degenerative, PNPLA8-related, dog","type":"exact"}],"termid":"MONDO:1012626","xrefs":{"Monarch":{"xref_id":"1012626"}}}


id: PBO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 17","termid":"PBO:0050161"}


id: PBO:0043226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLCA4 antisense RNA 1","termid":"PBO:0043226"}


id: GO:0036320
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88495],"is_not":false,"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with the mating-type peptide pheromone P-factor and transmitting the signal across the membrane to initiate a change in cell activity. P-factor is a polypeptide of 23 residues, with the sequence Thr-Tyr-Ala-Asp-Phe-Leu-Arg-Ala-Tyr-Gln-Ser-Trp-Asn-Thr-Phe-Val-Asn-Pro-Asp-Arg-Pro-Asn-Leu, and is a peptide pheromone released by Schizosaccharomyces pombe cells of the cellular mating type Plus.","definition_xrefs":["PMID:8314086","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mating-type P-factor pheromone receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P-factor mating pheromone receptor activity","type":"exact"},{"name":"P-factor receptor activity","type":"exact"}],"termid":"GO:0036320","terms_by_termid":{"GO:0036320":null}}


id: PBO:0042936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC glutathione specific gamma-glutamylcyclotransferase 2","termid":"PBO:0042936"}


id: MONDO:0017923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple synostoses syndrome (MSS) is a rare developmental bone disorder characterized by proximal symphalangism of the fingers and/or toes often associated with fusion of carpal and tarsal, humeroradial, and cervical spine joints.","definition_xrefs":["Orphanet:3237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome","secondary_identifiers":["DOID:0050794","icd11.foundation:248917534","GARD:3836","OMIMPS:186500","UMLS:C0175700","MEDGEN:511579"],"synonyms":[{"name":"WL syndrome","type":"exact"},{"name":"deafness-Hermann type symphalangism syndrome","type":"exact"},{"name":"facio-audio-symphalangism","type":"exact"},{"name":"symphalangism-brachydactyly syndrome","type":"exact"}],"termid":"MONDO:0017923","xrefs":{"Monarch":{"xref_id":"0017923"}}}


id: PBO:0041702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 1","termid":"PBO:0041702"}


id: MONDO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epithelial malignant thymoma (obsolete MONDO:0004399)","termid":"MONDO:0004399","xrefs":{"Monarch":{"xref_id":"0004399"}}}


id: GO:0033853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + oxaloacetate = prephenate + L-aspartate.","definition_xrefs":["RHEA:20445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"aspartate-prephenate aminotransferase activity","secondary_identifiers":["MetaCyc:PREPHENATE-ASP-TRANSAMINE-RXN","EC:2.6.1.78"],"synonyms":[{"name":"L-arogenate:oxaloacetate aminotransferase activity","type":"related"},{"name":"L-aspartate:prephenate aminotransferase activity","type":"related"},{"name":"PAT","type":"related"},{"name":"prephenate aspartate aminotransferase activity","type":"related"},{"name":"prephenate transaminase activity","type":"broad"}],"termid":"GO:0033853"}


id: PBO:0085927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; identical to Pau21p; encodes two proteins that are translated from two different start codons","termid":"PBO:0085927"}


id: GO:0015408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Fe3+(out) = ADP + phosphate + Fe3+(in).","definition_xrefs":["RHEA:12332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type ferric iron transporter activity","secondary_identifiers":["EC:7.2.2.7","MetaCyc:3.6.3.30-RXN"],"synonyms":[{"name":"ABC-type Fe3+ transporter","type":"exact"},{"name":"ATPase-coupled ferric iron transmembrane transporter activity","type":"related"},{"name":"Fe3+-transporting ATPase activity","type":"related"},{"name":"ferric ABC transporter","type":"exact"},{"name":"ferric transporting ATPase activity","type":"related"},{"name":"ferric-transporting ATPase activity","type":"related"}],"termid":"GO:0015408"}


id: GO:0070476
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80511],"is_not":false,"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"is_a","term_name":"rRNA base methylation","termid":"GO:0070475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"rRNA (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070476","terms_by_termid":{"GO:0070476":null}}


id: MONDO:0011922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired neutropenia (obsolete MONDO:0015822)","termid":"MONDO:0015822"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonimmune chronic idiopathic neutropenia of adults","secondary_identifiers":["Orphanet:2688","GARD:16605","MESH:C564320","OMIM:607847","ICD10CM:D70","UMLS:C1842930","MEDGEN:375050"],"synonyms":[{"name":"NI-CINA","type":"exact"},{"name":"adult idiopathic neutropenia","type":"exact"},{"name":"neutropenia, nonimmune chronic idiopathic, of adults","type":"exact"},{"name":"nonimmune chronic idiopathic neutropenia of adults","type":"exact"}],"termid":"MONDO:0011922","xrefs":{"Monarch":{"xref_id":"0011922"}}}


id: PBO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog (predicted)","termid":"PBO:0002518"}


id: GO:0032478
data:
  {"annotated_genes":["SJAG_01865","SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92187,114133],"is_not":false,"summary":null,"term":"GO:0032478"}]},"cv_name":"cellular_component","definition":"A heterotetrameric complex located in the mitochondrial inner membrane that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms. In S. pombe it is a heterotetramer of Dlp1 and Dps1.","definition_xrefs":["PMID:16262699","PMID:14519123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"heterotetrameric polyprenyl diphosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterotetrameric decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032478","terms_by_termid":{"GO:0032478":null}}


id: PBO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase (predicted)","termid":"PBO:0003086"}


id: PBO:0068395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 214","termid":"PBO:0068395"}


id: MONDO:0100114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dry age related macular degeneration is characterized by the presence of age-related deposits called drusen and atrophy.","definition_xrefs":["PMID:26319344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dry age related macular degeneration","secondary_identifiers":["MedDRA:10075567","MEDGEN:543161","UMLS:C0271083"],"synonyms":[{"name":"dry AMD","type":"exact"},{"name":"dry ARMD","type":"exact"}],"termid":"MONDO:0100114","xrefs":{"Monarch":{"xref_id":"0100114"}}}


id: GO:0051020
data:
  {"annotated_genes":["SJAG_00279","SJAG_03229","SJAG_04400","SJAG_02998","SJAG_02012","SJAG_04733","SJAG_02833","SJAG_02974","SJAG_00525","SJAG_01909","SJAG_03959","SJAG_03002","SJAG_01789","SJAG_01358","SJAG_01943","SJAG_00864","SJAG_00968","SJAG_03662","SJAG_04366","SJAG_03470","SJAG_03693","SJAG_04703","SJAG_03085","SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74369],"is_not":false,"summary":null,"term":"GO:0051020"},{"annotations":[77997,67827,64996,69204,61130,66825,58843,64993,74322,71661,75351,72257,78554,61656,63254,73851,59148,60485,64068,57306,61763,64821,69131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031267"}]},"cv_name":"molecular_function","definition":"Binding to a GTPase, any enzyme that catalyzes the hydrolysis of GTP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00525":null,"SJAG_00864":null,"SJAG_00968":null,"SJAG_01358":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01943":null,"SJAG_02012":null,"SJAG_02661":null,"SJAG_02833":null,"SJAG_02974":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03085":null,"SJAG_03229":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04703":null,"SJAG_04733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GTPase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0051020","terms_by_termid":{"GO:0031267":null,"GO:0051020":null}}


id: PBO:0078042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 32","termid":"PBO:0078042"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: _global:occurs_at
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_at","secondary_identifiers":["GOREL:0000501"],"termid":"_global:occurs_at"}


id: GO:0102533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: genkwanin + S-adenosyl-L-methionine = apigenin 4',7-dimethyl ether + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"genkwanin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14750"],"termid":"GO:0102533"}


id: GO:1905118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ribonucleoside-diphosphate reductase activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:24733891","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ribonucleoside-diphosphate reductase activity (obsolete GO:1905118)","synonyms":[{"name":"activation of RNR","type":"related"},{"name":"activation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"activation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"activation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"activation of class I ribonucleotide reductase activity","type":"related"},{"name":"activation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"activation of class II ribonucleotide reductase activity","type":"related"},{"name":"activation of class III ribonucleotide reductase activity","type":"related"},{"name":"activation of nucleoside diphosphate reductase activity","type":"related"},{"name":"activation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"activation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"activation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"activation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"positive regulation of RNR","type":"related"},{"name":"positive regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"positive regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"positive regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"positive regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"positive regulation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"up regulation of RNR","type":"related"},{"name":"up regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"up regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"up regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"up regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"up regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"up regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"up regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"up regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"up regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"up regulation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up regulation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"up-regulation of RNR","type":"related"},{"name":"up-regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up-regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"up-regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"up-regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"up-regulation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up-regulation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"upregulation of RNR","type":"related"},{"name":"upregulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"upregulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"upregulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"upregulation of class I ribonucleotide reductase activity","type":"related"},{"name":"upregulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"upregulation of class II ribonucleotide reductase activity","type":"related"},{"name":"upregulation of class III ribonucleotide reductase activity","type":"related"},{"name":"upregulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"upregulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"upregulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"upregulation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"upregulation of ribonucleotide diphosphate reductase activity","type":"related"}],"termid":"GO:1905118"}


id: PBO:0078248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25-1","termid":"PBO:0078248"}


id: GO:0004892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete B cell receptor activity (obsolete GO:0004892)","synonyms":[{"name":"B cell receptor activity","type":"exact"}],"termid":"GO:0004892"}


id: PBO:0040174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 5","termid":"PBO:0040174"}


id: GO:0097294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of XMP, xanthosine monophosphate, from simpler precursors.","definition_xrefs":["GOC:yaf","PMID:27590927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"XMP biosynthetic process","termid":"GO:0097293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"'de novo' XMP biosynthetic process","synonyms":[{"name":"'de novo' XMP anabolism","type":"exact"},{"name":"'de novo' XMP biosynthesis","type":"exact"},{"name":"'de novo' XMP formation","type":"exact"},{"name":"'de novo' XMP synthesis","type":"exact"}],"termid":"GO:0097294"}


id: GO:0018823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexa-1,5-diene-1-carbonyl-CoA + H2O = 6-hydroxycyclohex-1-enecarbonyl-CoA.","definition_xrefs":["EC:4.2.1.100","RHEA:21856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclohexa-1,5-dienecarbonyl-CoA hydratase activity","secondary_identifiers":["MetaCyc:4.2.1.100-RXN","KEGG_REACTION:R05597","UM-BBD_reactionID:r0203"],"synonyms":[{"name":"6-hydroxycyclohex-1-enecarbonyl-CoA (cyclohexa-1,5-dienecarbonyl-CoA-forming)","type":"related"},{"name":"cyclohex-1,5-diene-1-carbonyl-CoA hydratase activity","type":"exact"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carboxyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-dienecarbonyl-CoA hydro-lyase activity","type":"related"},{"name":"dienoyl-CoA hydratase activity","type":"related"}],"termid":"GO:0018823"}


id: MONDO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Hibiscus chlorotic ringspot virus infection (obsolete MONDO:0005123)","termid":"MONDO:0005123","xrefs":{"Monarch":{"xref_id":"0005123"}}}


id: PBO:0062953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1","termid":"PBO:0062953"}


id: FYPO_EXT:1000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"FYPO extension ontology grouping term for relations relevant to penetrance","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO extension","termid":"FYPO_EXT:1000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}


id: PBO:0078814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophinin","termid":"PBO:0078814"}


id: MONDO:0006699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Presence or formation of gallstones in the common bile duct.","definition_xrefs":["MESH:D042883"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"excluded_subClassOf","term_name":"gallbladder disorder","termid":"MONDO:0005281"},{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"gallstones","termid":"MONDO:0005346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"choledocholithiasis","secondary_identifiers":["DOID:11755","MEDGEN:148784","UMLS:C0701818","MedDRA:10049891","EFO:1000865"],"termid":"MONDO:0006699","xrefs":{"Monarch":{"xref_id":"0006699"}}}


id: PBO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Tos4 (predicted)","termid":"PBO:0001238"}


id: PBO:0050710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 8","termid":"PBO:0050710"}


id: GO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosterone","termid":"GO:0051412"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticosterone stimulus","termid":"GO:0071386"}


id: GO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class II protein complex.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"MHC class II protein complex assembly","termid":"GO:0002399"}


id: GO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CAP-Gly domain of a protein. The CAP_Gly domain is a conserved, glycine-rich domain of about 42 residues found in some cytoskeleton-associated proteins, and features a novel protein fold containing three beta-sheets.","definition_xrefs":["InterPro:IPR000938","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CAP-Gly domain binding","termid":"GO:0071794"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: MONDO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia caused by low iron intake, inefficient iron absorption in the gastrointestinal tract, or chronic blood loss.","definition_xrefs":["NCIT:C84484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypochromic microcytic anemia","termid":"MONDO:0000387"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"iron deficiency anemia","secondary_identifiers":["MEDGEN:57668","DOID:11758","MESH:D018798","SCTID:87522002","UMLS:C0162316","ICD9:280.8","ICD9:280.9"],"synonyms":[{"name":"iron-deficiency anaemia","type":"exact"},{"name":"iron-deficiency anemia","type":"exact"}],"termid":"MONDO:0001356","xrefs":{"Monarch":{"xref_id":"0001356"}}}


id: MONDO:0017244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthomatous diffuse cutaneous mastocytosis (PDCM) is a rare form of diffuse cutaneous mastocytosis (DCM) characterized by yellow-orange infiltrated and xanthogranuloma-like lesions with only limited blistering.","definition_xrefs":["Orphanet:280794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse cutaneous mastocytosis","termid":"MONDO:0019315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"pseudoxanthomatous diffuse cutaneous mastocytosis","secondary_identifiers":["UMLS:C5679949","MEDGEN:1842453","GARD:21089"],"synonyms":[{"name":"Pseudoxanthomatous DCM","type":"exact"},{"name":"infiltrative small vesicular DCM","type":"exact"},{"name":"infiltrative small vesicular diffuse cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0017244","xrefs":{"Monarch":{"xref_id":"0017244"}}}


id: GO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with corticotropin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"},{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"corticotropin receptor activity","synonyms":[{"name":"ACTH receptor activity","type":"exact"},{"name":"adrenocorticotropic hormone receptor activity","type":"exact"},{"name":"adrenocorticotropin receptor activity","type":"exact"}],"termid":"GO:0004978"}


id: PBO:0065777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamylated RFamide peptide receptor","termid":"PBO:0065777"}


id: PBO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 2","termid":"PBO:0047510"}


id: PBO:0082478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbonic anhydrase; metalloenzyme that catalyzes CO2 hydration to bicarbonate, which is an important metabolic substrate, and protons; not expressed under conditions of high CO2, such as inside a growing colony, but transcription is induced in response to low CO2 levels, such as on the colony surface in ambient air; poorly transcribed under aerobic conditions and at an undetectable level under anaerobic conditions; abundance increases in response to DNA replication stress","termid":"PBO:0082478"}


id: MONDO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary essential cutis verticis gyrata is a rare, progressive dermis disorder characterized by thickening of the scalp resulting in redundancy of the skin which gives rise to folds and grooves that give the scalp a cerebriform appearance. Folds cannot be corrected by pressure or traction and typically are symmetric and extend anteroposteriorly from vertex to occiput and/or transversely in occipital region. Additional features may include mild subungual hyperkeratosis and distal onycholysis of the nail plates of the great toes. It is not associated with neurological and ophthalmological changes, nor with secondary causes.","definition_xrefs":["Orphanet:357220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutis verticis gyrata","termid":"MONDO:0019033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"primary essential cutis verticis gyrata","secondary_identifiers":["icd11.foundation:895947895","UMLS:C4707327","SCTID:765135003","MEDGEN:1632625","GARD:21537"],"termid":"MONDO:0018167","xrefs":{"Monarch":{"xref_id":"0018167"}}}


id: GO:0051386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the neurotrophin TRK receptor signaling pathway.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"neurotrophin TRK receptor signaling pathway","termid":"GO:0048011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of neurotrophin TRK receptor signaling pathway","synonyms":[{"name":"regulation of NGF receptor signaling pathway","type":"exact"},{"name":"regulation of NGF receptor signalling pathway","type":"exact"},{"name":"regulation of nerve growth factor receptor signaling pathway","type":"related"},{"name":"regulation of nerve growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0051386"}


id: PATO:0001613
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of color which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant color","termid":"PATO:0001615"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of color","synonyms":[{"name":"low variability of color","type":"exact"}],"termid":"PATO:0001613"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: PBO:0046674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESX homeobox 1","termid":"PBO:0046674"}


id: PBO:0050701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 14","termid":"PBO:0050701"}


id: PBO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 10","termid":"PBO:0070780"}


id: MOD:01408
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazoline-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-threonine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4S)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK (4S)-thiazoline-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine (4S)-thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01408"}


id: PBO:0005374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIIa (predicted)","termid":"PBO:0005374"}


id: PBO:0013098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear import protein Rtp1 (predicted)","termid":"PBO:0013098"}


id: PBO:0055274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2701","termid":"PBO:0055274"}


id: GO:0061695
data:
  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id: PBO:0079448
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id: MONDO:0011451
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id: PBO:0085063
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id: MONDO:0002225
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id: PATO:0001958
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id: FYPO:0005859
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id: MONDO:0009419
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id: PBO:0062900
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id: MONDO:0021146
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id: PBO:0078618
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 67","termid":"PBO:0078618"}


id: PR:O42904
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id: PBO:0081484
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id: GO:0018392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP + H+.","definition_xrefs":["EC:2.4.1.214","RHEA:24444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->3)-fucosyltransferase activity","termid":"GO:0046920"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glycoprotein 3-alpha-L-fucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06015","MetaCyc:2.4.1.214-RXN"],"synonyms":[{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose:asparagine-linked N-acetylglucosamine alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of 4-N-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of N4-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fuc-alpha-1->6-GlcNAc)-Asn-peptide) alpha-1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6-GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"}],"termid":"GO:0018392"}


id: MONDO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign diffuse vascular proliferation in the breast. It is characterized by the formation of capillary-sized and cavernous vascular spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast angiomatosis","secondary_identifiers":["DOID:1637","NCIT:C40381","UMLS:C1511284","MEDGEN:307304"],"termid":"MONDO:0002064","xrefs":{"Monarch":{"xref_id":"0002064"}}}


id: PBO:0113064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex; binds to and modulates the activity of RNA polymerases I and II; required for expression of certain genes, modification of some histones, and telomere maintenance; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay; role in preventing L-A mycovirus pathogenesis; protein abundance increases in response to DNA replication stress; human homolog, parafibromin, is a tumour suppressor linked to breast, renal and gastric cancers","termid":"PBO:0113064"}


id: PBO:0054287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1678","termid":"PBO:0054287"}


id: PBO:0045293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 45","termid":"PBO:0045293"}


id: GO:1900077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"negatively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to insulin stimulus","synonyms":[{"name":"down regulation of cellular response to insulin stimulus","type":"exact"},{"name":"down-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"downregulation of cellular response to insulin stimulus","type":"exact"},{"name":"inhibition of cellular response to insulin stimulus","type":"narrow"}],"termid":"GO:1900077"}


id: MONDO:0010013
data:
  {"annotated_genes":["SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87266],"is_not":false,"summary":null,"term":"MONDO:0010013"}]},"cv_name":"mondo","definition":"Schneckenbecken dysplasia (or chondrodysplasia with snail-like pelvis) is a prenatally lethal spondylodysplastic dysplasia.","definition_xrefs":["Orphanet:3144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"severe spondylodysplastic dysplasia","termid":"MONDO:0800080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"schneckenbecken dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:98475","OMIM:269250","GARD:169","MESH:C536637","SCTID:254049009","icd11.foundation:584032448","DOID:0050775","UMLS:C0432194","ICD9:756.9"],"synonyms":[{"name":"SHNKND","type":"related"},{"name":"SLC35D1-CDG","type":"exact"},{"name":"chondrodysplasia lethal neonatal with snail like pelvis","type":"related"},{"name":"chondrodysplasia with snail-like pelvis","type":"exact"},{"name":"chondrodysplasia, lethal neonatal, with snail-like pelvis","type":"related"},{"name":"schneckenbecken dysplasia","type":"exact"}],"termid":"MONDO:0010013","terms_by_termid":{"MONDO:0010013":null},"xrefs":{"Monarch":{"xref_id":"0010013"}}}


id: PBO:0041858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4 like, pseudogene","termid":"PBO:0041858"}


id: GO:0031318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a folic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of nutrient","termid":"GO:0009594"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of folic acid","synonyms":[{"name":"detection of folate","type":"exact"},{"name":"folate detection","type":"exact"},{"name":"folate sensing","type":"exact"},{"name":"folic acid detection","type":"exact"},{"name":"folic acid sensing","type":"exact"}],"termid":"GO:0031318"}


id: MONDO:0004542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly differentiated variant of adenosquamous carcinoma that arises from the cervix. It is characterized by the presence of large malignant cells with ground glass cytoplasm and stromal eosinophilic infiltrates.","definition_xrefs":["NCIT:C40212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenosquamous carcinoma","termid":"MONDO:0006134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenosquamous carcinoma, glassy cell variant","secondary_identifiers":["MEDGEN:308943","MESH:C536823","DOID:8361","ICD10CM:C53.0","ONCOTREE:CEGCC","GARD:20500","UMLS:C1516407","Orphanet:213833"],"synonyms":[{"name":"GCC of the cervix","type":"related"},{"name":"cervical adenosquamous carcinoma, glassy cell variant","type":"exact"},{"name":"glassy cell adenocarcinoma of the uterine cervix","type":"related"},{"name":"glassy cell carcinoma of the cervix","type":"related"},{"name":"glassy cell carcinoma of the cervix uteri","type":"related"},{"name":"glassy cell variant cervical adenosquamous carcinoma","type":"related"}],"termid":"MONDO:0004542","xrefs":{"Monarch":{"xref_id":"0004542"}}}


id: GO:0021776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","PMID:15936325","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in spinal cord motor neuron cell fate specification","synonyms":[{"name":"hedgehog signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"hh signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"smoothened signalling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"}],"termid":"GO:0021776"}


id: SOFP:feature_property
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A general purpose relation between a biological feature and some value","definition_xrefs":["so:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_property","termid":"SOFP:feature_property"}


id: PBO:0042293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 gamma subunit of T-cell receptor complex","termid":"PBO:0042293"}


id: MONDO:0006647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrosis occurring in the anterior cerebral artery system, including branches such as Heubner's artery. These arteries supply blood to the medial and superior parts of the cerebral hemisphere, Infarction in the anterior cerebral artery usually results in sensory and motor impairment in the lower body.","definition_xrefs":["MESH:D020243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral infarction","termid":"MONDO:0002679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior cerebral artery infarction","secondary_identifiers":["UMLS:C0751843","MEDGEN:148402","EFO:1000807","DOID:3528"],"termid":"MONDO:0006647","xrefs":{"Monarch":{"xref_id":"0006647"}}}


id: FYPO:0001203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of coflocculation. In coflocculation, yeast cells coaggregate with cells of another species, usually bacteria.","definition_xrefs":["PMID:11472912","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"coflocculating cells","synonyms":[{"name":"co-flocculating cells","type":"exact"},{"name":"increased coflocculation","type":"exact"}],"termid":"FYPO:0001203"}


id: GO:1905958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to alcohol.","definition_xrefs":["GOC:TermGenie","PMID:26434723","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of cellular response to alcohol","termid":"GO:1905957"},{"relation_name":"negatively_regulates","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to alcohol","synonyms":[{"name":"down regulation of cellular response to alcohol","type":"exact"},{"name":"down-regulation of cellular response to alcohol","type":"exact"},{"name":"downregulation of cellular response to alcohol","type":"exact"},{"name":"inhibition of cellular response to alcohol","type":"narrow"}],"termid":"GO:1905958"}


id: MONDO:0012272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, keratoconus, febrile seizures, and sinoatrial block","secondary_identifiers":["MEDGEN:324455","OMIM:609438","UMLS:C1836202","MESH:C537452"],"synonyms":[{"name":"intellectual disability, keratoconus, febrile seizures, and sinoatrial block","type":"exact"},{"name":"mental retardation, keratoconus, febrile seizures, and sinoatrial block","type":"related"}],"termid":"MONDO:0012272","xrefs":{"Monarch":{"xref_id":"0012272"}}}


id: PBO:0013829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein Ppp1 (predicted)","termid":"PBO:0013829"}


id: GO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular metabolic process in which a cell duplicates one or more molecules of RNA.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA replication","termid":"GO:0039703"}


id: GO:0051567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:ai","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 methylation (obsolete GO:0051567)","synonyms":[{"name":"histone H3 K9 methylation","type":"exact"},{"name":"histone H3K9me","type":"exact"},{"name":"histone lysine H3 K9 methylation","type":"exact"}],"termid":"GO:0051567"}


id: GO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interferon-gamma (a type II interferon) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0126896631","GOC:ai","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"type II interferon receptor activity","synonyms":[{"name":"IFN-gamma receptor activity","type":"exact"},{"name":"IFNG receptor activity","type":"exact"},{"name":"interferon-gamma receptor activity","type":"exact"}],"termid":"GO:0004906"}


id: PBO:0073634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 20, pseudogene","termid":"PBO:0073634"}


id: GO:0170045
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100608],"is_not":false,"summary":null,"term":"GO:0170045"}]},"cv_name":"molecular_function","definition":"Enables the transfer of isopentenyl pyrophosphate from one side of a membrane to the other.","definition_xrefs":["GOC:ew","PMID:37813972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"isopentenyl pyrophosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPP transmembrane transport activity","type":"exact"},{"name":"isopentenyl diphosphate transmembrane transport activity","type":"exact"}],"termid":"GO:0170045","terms_by_termid":{"GO:0170045":null}}


id: MONDO:0006565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis herpetiformis in children","definition_xrefs":["EFO:1000719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis herpetiformis","termid":"MONDO:0015614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"juvenile dermatitis herpetiformis","secondary_identifiers":["ICD9:694.2","DOID:8507","UMLS:C0152092","SCTID:5906000","MEDGEN:508884"],"termid":"MONDO:0006565","xrefs":{"Monarch":{"xref_id":"0006565"}}}


id: PBO:0113022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches and the cytokinetic contractile ring; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0113022"}


id: PBO:0041008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORCS8-MEF2B readthrough","termid":"PBO:0041008"}


id: PBO:0080820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XXYLT1 antisense RNA 1","termid":"PBO:0080820"}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: GO:0047183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-4-coumaroyl-CoA + an anthocyanidin 3,5-di-O-beta-D-glucoside = an anthocyanidin 3-O-beta-D-glucoside 5-O-beta-D-[(6-O-(E)-4-coumaroyl)glucoside] + CoA. Caffeoyl-CoA can also act as an acyl donor.","definition_xrefs":["EC:2.3.1.153","RHEA:15661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"anthocyanin 5-(6'''-hydroxycinnamoyltransferase) activity","secondary_identifiers":["MetaCyc:RXN-7945"],"synonyms":[{"name":"anthocyanin 5-aromatic acyltransferase activity","type":"exact"},{"name":"hydroxycinnamoyl-CoA:anthocyanidin 3,5-diglucoside 5-O-glucoside-6'''-O-hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047183"}


id: PBO:0061791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 2 pseudogene 1","termid":"PBO:0061791"}


id: FYPO:0004373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is abnormal. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0007095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abnormal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abnormal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004373"}


id: PBO:0027706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_processivity_factor_activity","termid":"PBO:0027706"}


id: GO:0000465
data:
  {"annotated_genes":["SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107825],"is_not":false,"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 5'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000465","terms_by_termid":{"GO:0000465":null}}


id: PBO:0073162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 antisense RNA 1","termid":"PBO:0073162"}


id: MONDO:0007010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveitis (obsolete MONDO:0007010)","termid":"MONDO:0007010","xrefs":{"Monarch":{"xref_id":"0007010"}}}


id: PBO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 7 like","termid":"PBO:0042470"}


id: GO:0009862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by salicylic acid involved in systemic acquired resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"},{"relation_name":"part_of","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"systemic acquired resistance, salicylic acid mediated signaling pathway","synonyms":[{"name":"salicylic acid mediated signaling pathway (systemic acquired resistance)","type":"exact"},{"name":"systemic acquired resistance, salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009862"}


id: MONDO:1011809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple lipomatosis, non-human animal","secondary_identifiers":["OMIA:000606"],"termid":"MONDO:1011809","xrefs":{"Monarch":{"xref_id":"1011809"}}}


id: PBO:0073654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM1 antisense RNA 1","termid":"PBO:0073654"}


id: FYPO:0000264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of a microtubule-destabilizing substance than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to microtubule-destabilizing substance","synonyms":[{"name":"resistance to microtubule depolymerizing drugs","type":"exact"},{"name":"resistance to microtubule destabilising substance","type":"exact"},{"name":"resistance to microtubule-destabilizing substance during mitotic cell cycle","type":"related"},{"name":"resistance to microtubule-destabilizing substance during vegetative growth","type":"exact"},{"name":"resistant to microtubule-destabilizing substance","type":"exact"}],"termid":"FYPO:0000264"}


id: GO:0006881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining iron ions in an extracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular sequestering of iron ion (obsolete GO:0006881)","synonyms":[{"name":"extracellular iron ion retention","type":"exact"},{"name":"extracellular iron ion sequestering","type":"exact"},{"name":"extracellular iron ion sequestration","type":"exact"},{"name":"extracellular iron ion storage","type":"exact"},{"name":"extracellular retention of iron ion","type":"exact"},{"name":"extracellular sequestration of iron ion","type":"exact"},{"name":"extracellular storage of iron ion","type":"exact"}],"termid":"GO:0006881"}


id: GO:0033232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-methionine(out/in) = ADP + phosphate + D-methionine(in/out).","definition_xrefs":["PMID:12819857","RHEA:29767","PMID:18621668","GOC:mlg","PMID:12169620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"},{"relation_name":"is_a","term_name":"methionine transmembrane transporter activity","termid":"GO:0043865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type D-methionine transporter activity","secondary_identifiers":["GO:0048474","GO:0032521","GO:0032522","GO:1901243","EC:7.4.2.11","MetaCyc:TRANS-RXN0-202"],"synonyms":[{"name":"ATP-dependent D-methionine transporter activity","type":"related"},{"name":"ATP-dependent methionine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled D-methionine transporter activity","type":"related"},{"name":"ATPase-coupled methionine transmembrane transporter activity","type":"related"},{"name":"D-methionine exporter","type":"related"},{"name":"D-methionine importer","type":"related"},{"name":"D-methionine transmembrane transporter activity","type":"related"},{"name":"D-methionine transporter activity","type":"related"},{"name":"D-methionine-exporting ATPase activity","type":"related"},{"name":"D-methionine-importing ATPase activity","type":"related"},{"name":"D-methionine-transporting ATPase activity","type":"related"},{"name":"methionine transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:0033232"}


id: PBO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ddx27/Drs1","termid":"PBO:0090312"}


id: PR:P36625
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.03c","synonyms":[{"name":"Spom972h-rec7","type":"exact"}],"termid":"PR:P36625"}


id: GO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the trimethylguanosine (m(3)(2,2,7)-GTP) group located at the 5' end of some RNA molecules. Such trimethylated cap structures, generally produced by posttranscriptional modification of a 7-methylguanosine cap, are often found on snRNAs and snoRNAs transcribed by RNA polymerase II, but have also be found on snRNAs transcribed by RNA polymerase III. They have also been found on a subset of the mRNA population in some species, e.g. C. elegans.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"RNA trimethylguanosine cap binding","synonyms":[{"name":"RNA m2,2,7G cap binding","type":"exact"}],"termid":"GO:0000341"}


id: FYPO:0007458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization to the portion of the nuclear envelope enclosing the mitotic nuclear bridge does not occur. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase. Normally, nuclear pores that lack baskets are found in the midzone of the nuclear bridge.","definition_xrefs":["PMID:32848252","GO:0140510","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization during mitosis","termid":"FYPO:0003783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished nuclear pore localization to mitotic nuclear bridge","synonyms":[{"name":"abolished NPC localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore complex localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore distribution to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localisation to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization in nuclear envelope at mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during vegetative growth","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge membrane domain","type":"exact"}],"termid":"FYPO:0007458"}


id: PBO:0004047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20 small nucleolar RNA","termid":"PBO:0004047"}


id: PR:O13966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aconitate hydratase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.06c","secondary_identifiers":["UniProtKB:O13966"],"synonyms":[{"name":"Aconitase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACO2","type":"exact"},{"name":"citrate hydro-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13966"}


id: PBO:0046804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 2","termid":"PBO:0046804"}


id: PBO:0078334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-6","termid":"PBO:0078334"}


id: GO:0120202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a rod photoreceptor outer segment, and containing densely packed molecules of rhodopsin photoreceptor proteins that traverse the lipid bilayer. It is thought that rod disc membranes arise as evaginations of the ciliary membrane near the base of the outer segment, which then become completely separated from the ciliary membrane, during the development of the rod outer segment.","definition_xrefs":["PMID:6771304","GOC:pde","GOC:krc","PMID:19501669","PMID:26574505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"photoreceptor disc membrane","termid":"GO:0097381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"rod photoreceptor disc membrane","termid":"GO:0120202"}


id: MONDO:0013597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited bleeding disorder, platelet-type in which the cause of the disease is a mutation in the TBXAS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 14","secondary_identifiers":["MESH:C562866","UMLS:C0398635","MEDGEN:98307","SCTID:234477002","OMIM:614158","DOID:0111047"],"synonyms":[{"name":"BDPLT14","type":"exact"},{"name":"TBXAS1 inherited bleeding disorder, platelet-type","type":"exact"},{"name":"bleeding disorder, platelet-type, 14","type":"related"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in TBXAS1","type":"exact"},{"name":"thromboxane synthase deficiency","type":"exact"},{"name":"thromboxane synthetase deficiency","type":"related"}],"termid":"MONDO:0013597","xrefs":{"Monarch":{"xref_id":"0013597"}}}


id: MONDO:0020779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysfunction in the growth of cartilage.","definition_xrefs":["NCIT:C34466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage development disorder","secondary_identifiers":["ICD9:756.4","ICD9:756.9","UMLS:C0008449","MEDGEN:935","SCTID:67988000"],"synonyms":[{"name":"Congenital anomaly of cartilage","type":"related"},{"name":"abnormal development of cartilage","type":"related"},{"name":"cartilage development disorder","type":"exact"},{"name":"chondrodystrophy","type":"exact"}],"termid":"MONDO:0020779","xrefs":{"Monarch":{"xref_id":"0020779"}}}


id: MONDO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malaria is a serious and sometimes fatal disease caused by a parasite that commonly infects a certain type of mosquito which feeds on humans. Infection with malaria parasites may result in a wide variety of symptoms, ranging from absent or very mild symptoms to severe disease and even death. People who get malaria are typically very sick with high fevers, shaking chills, and flu-like illness. In general, malaria is a curable disease if diagnosed and treated promptly and correctly.Treatment depends on many factors including disease severity, the species of malaria parasite causing the infection and the part of the world in which the infection was acquired.","direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"erythrocyte disorder","termid":"MONDO:0044347"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"malaria","secondary_identifiers":["GARD:6961","MedDRA:10025487","ICD10CM:B53","EFO:0001068","icd11.foundation:1439886552","ICD9:084","ICD9:084.6","MEDGEN:7443","Orphanet:673","NCIT:C34797","SCTID:61462000","UMLS:C0024530","MESH:D008288","DOID:12365","ICD10CM:B53.0"],"synonyms":[{"name":"plasmodiosis","type":"related"}],"termid":"MONDO:0005136","xrefs":{"Monarch":{"xref_id":"0005136"}}}


id: PBO:0051193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-11 (pseudogene)","termid":"PBO:0051193"}


id: GO:0061420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of biotin.","definition_xrefs":["GOC:dph","PMID:16533810"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to biotin starvation (obsolete GO:0061420)","termid":"GO:0061420"}


id: GO:1990807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an acetyl group to a nitrogen atom on the amino acid of a protein.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-acetyltransferase activity (obsolete GO:1990807)","termid":"GO:1990807"}


id: MONDO:0033562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies, impaired speech, and hypotonia","secondary_identifiers":["OMIM:619005","UMLS:C5436585","GARD:18528","MEDGEN:1776912"],"synonyms":[{"name":"NEDDISH","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES, IMPAIRED SPEECH, AND HYPOTONIA","type":"related"},{"name":"neurodevelopmental disorder with dysmorphic facies, impaired speech and hypotonia","type":"exact"}],"termid":"MONDO:0033562","xrefs":{"Monarch":{"xref_id":"0033562"}}}


id: GO:0051525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to NFAT (nuclear factor of activated T cells) proteins, a family of transcription factors. NFAT proteins have crucial roles in the development and function of the immune system.","definition_xrefs":["PMID:15928679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NFAT protein binding","secondary_identifiers":["GO:0051526","GO:0051527","GO:0051528","GO:0051530","GO:0051529"],"synonyms":[{"name":"NFAT binding","type":"exact"},{"name":"NFAT1 protein binding","type":"narrow"},{"name":"NFAT2 protein binding","type":"narrow"},{"name":"NFAT3 protein binding","type":"narrow"},{"name":"NFAT4 protein binding","type":"narrow"},{"name":"NFAT5 protein binding","type":"narrow"},{"name":"NFATc binding","type":"narrow"},{"name":"NFATc1 binding","type":"narrow"},{"name":"NFATc2 binding","type":"narrow"},{"name":"NFATc3 binding","type":"narrow"},{"name":"NFATc4 binding","type":"narrow"},{"name":"NFATp binding","type":"narrow"},{"name":"NFATx binding","type":"narrow"},{"name":"non-calcium-regulated NFAT protein binding","type":"narrow"},{"name":"nuclear factor of activated T cell protein binding","type":"exact"}],"termid":"GO:0051525"}


id: GO:0099074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the lysosome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:PARL-UCL","GOC:bc","PMID:20619655","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrion to lysosome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to lysosome transport","type":"exact"}],"termid":"GO:0099074"}


id: MONDO:0033645
data:
  {"annotated_genes":["SJAG_06046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86105],"is_not":false,"summary":null,"term":"MONDO:0033645"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619054","UMLS:C5436694","GARD:16409","DOID:0070497","MEDGEN:1760275"],"synonyms":[{"name":"MC4DN11","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 11","type":"exact"}],"termid":"MONDO:0033645","terms_by_termid":{"MONDO:0033645":null},"xrefs":{"Monarch":{"xref_id":"0033645"}}}


id: PBO:0051587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 19","termid":"PBO:0051587"}


id: PBO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 7","termid":"PBO:0050190"}


id: MONDO:0012157
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86397],"is_not":false,"summary":null,"term":"MONDO:0012157"}]},"cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset muscle weakness, and low amplitude of the miniature endplate potential and current that has material basis in homozygous or compound heterozygous mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["PMID:25792100","PMID:8957026","DOID:0110679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608931","GARD:10108","UMLS:C1837091","MEDGEN:373251"],"synonyms":[{"name":"CMS Id","type":"exact"},{"name":"CMS1D","type":"exact"},{"name":"CMS4C","type":"exact"},{"name":"Cms Id","type":"related"},{"name":"Cms Id, formerly","type":"related"},{"name":"FIM1","type":"exact"},{"name":"congenital myasthenic syndrome 4C associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome associated with acetylcholine receptor deficiency","type":"related"},{"name":"congenital myasthenic syndrome type 4C","type":"exact"},{"name":"congenital myasthenic syndrome type Id","type":"exact"},{"name":"familial infantile myasthenia 1","type":"exact"},{"name":"myasthenia, familial infantile, 1","type":"related"},{"name":"myasthenia, familial infantile, 1, formerly","type":"related"},{"name":"myasthenic syndrome, congenital, 4C, associated with acetylcholine receptor deficiency","type":"related"},{"name":"myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency","type":"related"},{"name":"myasthenic syndrome, congenital, type Id","type":"related"}],"termid":"MONDO:0012157","terms_by_termid":{"MONDO:0012157":null},"xrefs":{"Monarch":{"xref_id":"0012157"}}}


id: FYECO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nigericin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ nigericin","termid":"FYECO:0000287"}


id: MONDO:0013462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 6 deficiency","secondary_identifiers":["MEDGEN:462569","UMLS:C3151219","OMIM:613852"],"synonyms":[{"name":"fucosyltransferase 6 deficiency","type":"exact"}],"termid":"MONDO:0013462","xrefs":{"Monarch":{"xref_id":"0013462"}}}


id: MONDO:0013080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0019303"],"is_obsolete":false,"name":"primary biliary cholangitis 3","secondary_identifiers":["OMIM:613008","DOID:0070360","MEDGEN:414443","GARD:15602","MESH:C567816","UMLS:C2751695"],"synonyms":[{"name":"PBC3","type":"related"},{"name":"biliary cirrhosis, primary, 3","type":"related"}],"termid":"MONDO:0013080","xrefs":{"Monarch":{"xref_id":"0013080"}}}


id: SO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000251 eight_cutter_restriction_site (obsolete SO:0000251)","synonyms":[{"name":"8-cutter_restriction_site","type":"related"},{"name":"eight-cutter_restriction_site","type":"related"}],"termid":"SO:0000251"}


id: PBO:0077122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 1","termid":"PBO:0077122"}


id: PBO:0077631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 3","termid":"PBO:0077631"}


id: GO:0021608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the accessory nerve. This process pertains to the initial formation of a structure from unspecified parts. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"accessory nerve morphogenesis","termid":"GO:0021607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve formation","synonyms":[{"name":"CN XI biosynthesis","type":"related"},{"name":"CN XI formation","type":"related"}],"termid":"GO:0021608"}


id: MONDO:0006263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Langerhans cell histiocytosis (obsolete MONDO:0006263)","termid":"MONDO:0006263","xrefs":{"Monarch":{"xref_id":"0006263"}}}


id: PBO:0043410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 7","termid":"PBO:0043410"}


id: GO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a short-chain (2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["RHEA:47196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13449","EC:1.3.8.1","KEGG_REACTION:R01178"],"synonyms":[{"name":"butanoyl-CoA dehydrogenase","type":"narrow"},{"name":"butyryl dehydrogenase","type":"narrow"},{"name":"short-chain acyl CoA dehydrogenase","type":"exact"},{"name":"short-chain-acyl-CoA dehydrogenase activity","type":"exact"},{"name":"unsaturated acyl-CoA reductase","type":"broad"}],"termid":"GO:0016937"}


id: MONDO:0003621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine tumor that arises from the small intestine and produces vasoactive intestinal peptide.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"small intestine neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0002995"},{"relation_name":"is_a","term_name":"VIPoma","termid":"MONDO:0019960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestinal vasoactive intestinal peptide producing tumor","secondary_identifiers":["UMLS:C1336009","DOID:5740","MEDGEN:277655","NCIT:C27455"],"synonyms":[{"name":"small intestinal VIP producing tumor","type":"exact"},{"name":"small intestinal VIP producing tumour","type":"exact"},{"name":"small intestinal VIP-producing NET","type":"exact"},{"name":"small intestinal VIP-producing neuroendocrine tumor","type":"exact"},{"name":"small intestinal VIP-producing neuroendocrine tumour","type":"exact"},{"name":"small intestinal VIPoma","type":"exact"},{"name":"small intestinal vasoactive intestinal peptide producing tumor","type":"exact"}],"termid":"MONDO:0003621","xrefs":{"Monarch":{"xref_id":"0003621"}}}


id: GO:0032295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which satellite glial cells isolate neuronal cell bodies.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ensheathment of neurons","termid":"GO:0007272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neuronal cell bodies","termid":"GO:0032295"}


id: PBO:0028892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_vegetative_growth","termid":"PBO:0028892"}


id: GO:1990684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein, lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["PMID:21423178","PMID:22028337","GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-lipid-RNA complex","synonyms":[{"name":"miRNA-lipoprotein complex","type":"related"}],"termid":"GO:1990684"}


id: PBO:0079031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-4","termid":"PBO:0079031"}


id: MONDO:0007841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Small patella syndrome (SPS) is a very rare benign bone dysplasia affecting skeletal structures of the lower limb and the pelvis.","definition_xrefs":["Orphanet:1509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coxopodopatellar syndrome","secondary_identifiers":["MEDGEN:333474","SCTID:720752007","MESH:C535540","UMLS:C1840061","icd11.foundation:794154672","GARD:3030","OMIM:147891","DOID:0111382"],"synonyms":[{"name":"Coxo-podo-patellar syndrome","type":"related"},{"name":"ICPPS","type":"related"},{"name":"SPS","type":"related"},{"name":"Scott-Taor syndrome","type":"exact"},{"name":"congenital coxa vara, patella aplasia and tarsal synostosis","type":"related"},{"name":"coxopodopatellar syndrome","type":"exact"},{"name":"ischiocoxopodopatellar syndrome","type":"related"},{"name":"ischiocoxopodopatellar syndrome with or without pulmonary arterial hypertension","type":"exact"},{"name":"ischiopatellar dysplasia","type":"exact"},{"name":"patella aplasia, coxa vara, tarsal synostosis","type":"related"},{"name":"small patella syndrome","type":"exact"}],"termid":"MONDO:0007841","xrefs":{"Monarch":{"xref_id":"0007841"}}}


id: PBO:0068095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 402","termid":"PBO:0068095"}


id: PBO:0065271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 33","termid":"PBO:0065271"}


id: PBO:0074432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 32","termid":"PBO:0074432"}


id: PBO:0083335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the essential uncharacterized ORF YDR412W that is implicated in rRNA processing","termid":"PBO:0083335"}


id: PBO:0015656
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.1x10^4 min-1 M-1","termid":"PBO:0015656"}


id: MONDO:0859361
data:
  {"annotated_genes":["SJAG_03950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85927],"is_not":false,"summary":null,"term":"MONDO:0859361"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and ischiopubic hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620210","UMLS:C5774298","MEDGEN:1824071"],"termid":"MONDO:0859361","terms_by_termid":{"MONDO:0859361":null},"xrefs":{"Monarch":{"xref_id":"0859361"}}}


id: PBO:0061966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AF member 1 pseudogene","termid":"PBO:0061966"}


id: PBO:0082058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase; catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by tyrosine or high concentrations of phenylalanine or tryptophan; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0082058"}


id: GO:0018458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,6R)-isopiperitenol + NAD+ = (6R)-isoperitenone + H+ + NADH.","definition_xrefs":["EC:1.1.1.223","RHEA:20860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isopiperitenol dehydrogenase activity","secondary_identifiers":["MetaCyc:ISOPIPERITENOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03261","UM-BBD_reactionID:r0740"],"synonyms":[{"name":"(-)-trans-isopiperitenol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018458"}


id: GO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hyaluronan, the naturally occurring anionic form of hyaluronic acid. Hyaluronan is a type of non-sulfated glycosaminoglycan composed of the repeating disaccharide unit beta(1,4)-D-glucuronic acid-beta(1,3)-N-acetyl-D-glucosamine.","definition_xrefs":["PMID:33171800","PMID:35536932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"hyaluronan metabolic process","termid":"GO:0030212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaluronan biosynthetic process","secondary_identifiers":["Reactome:R-HSA-2142850"],"synonyms":[{"name":"hyaluronan anabolism","type":"exact"},{"name":"hyaluronan biosynthesis","type":"exact"},{"name":"hyaluronan formation","type":"exact"},{"name":"hyaluronan synthesis","type":"exact"}],"termid":"GO:0030213"}


id: PBO:0067116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 160, pseudogene","termid":"PBO:0067116"}


id: GO:1904787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["GO_REF:0000058","PMID:17476329","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of asymmetric protein localization involved in cell fate determination","termid":"GO:1904785"},{"relation_name":"positively_regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"activation of asymmetric protein localisation involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate commitment","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization resulting in cell fate commitment","type":"narrow"},{"name":"activation of cell fate commitment, asymmetric protein localization","type":"narrow"},{"name":"positive regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"positive regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"positive regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"positive regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up-regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up-regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"upregulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"upregulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904787"}


id: GO:0010099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of photomorphogenesis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photomorphogenesis","termid":"GO:0010099"}


id: MONDO:0012418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 12p13.2-p11.23.","definition_xrefs":["DOID:0110514","PMID:16650082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 62","secondary_identifiers":["OMIM:610143","GARD:22618","MESH:C565719","MEDGEN:387916","UMLS:C1857820"],"synonyms":[{"name":"DFNB62","type":"narrow"},{"name":"autosomal recessive deafness 62","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 62","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 62","type":"narrow"},{"name":"deafness, autosomal recessive 62","type":"narrow"}],"termid":"MONDO:0012418","xrefs":{"Monarch":{"xref_id":"0012418"}}}


id: GO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a receptor-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host receptor-mediated signal transduction","synonyms":[{"name":"disruption of host receptor-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host receptor-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075111"}


id: GO:0140222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The enclosed volume within the sealed membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:10560000","PMID:26842840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-enclosed lumen","termid":"GO:0031974"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole lumen","synonyms":[{"name":"lumen of a pathogen-containing vacuole","type":"exact"},{"name":"pathogen inclusion lumen","type":"related"},{"name":"pathogen-containing compartment lumen","type":"exact"},{"name":"pathogen-containing vacuolar lumen","type":"exact"}],"termid":"GO:0140222"}


id: PBO:0040984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 2","termid":"PBO:0040984"}


id: FYPO:0002833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of polyuridylation-dependent decapping of nuclear-transcribed mRNA is decreased. All RNA decapping may be decreased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased polyuridylation-dependent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"decreased poly(U)-dependent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"decreased polyuridylation-dependent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"decreased polyuridylation-dependent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"},{"name":"decreased uridylation-dependent decapping of nuclear-transcribed mRNA","type":"broad"},{"name":"reduced polyuridylation-dependent decapping of nuclear-transcribed mRNA","type":"exact"}],"termid":"FYPO:0002833"}


id: FYECO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which myristic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ myristic acid","termid":"FYECO:0000044"}


id: MONDO:0022603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly tibial hypoplasia","termid":"MONDO:0022603","xrefs":{"Monarch":{"xref_id":"0022603"}}}


id: MONDO:0024287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality of the arteries and veins, lymph vessels or veins and lymph vessels.","definition_xrefs":["NCIT:C112117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular malformation","termid":"MONDO:0024291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital vascular malformation","secondary_identifiers":["MEDGEN:743837","UMLS:C1961121"],"synonyms":[{"name":"congenital vascular malformation","type":"exact"},{"name":"vascular malformation","type":"broad"}],"termid":"MONDO:0024287","xrefs":{"Monarch":{"xref_id":"0024287"}}}


id: GO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Shade avoidance is a set of responses that plants display when they are subjected to the shade of another plant. It often includes elongation, altered flowering time, increased apical dominance and altered partitioning of resources. Plants are able to distinguish between the shade of an inanimate object (e.g. a rock) and the shade of another plant due to the altered balance between red and far-red light in the shade of a plant; this balance between red and far-red light is perceived by phytochrome.","definition_xrefs":["Wikipedia:Shade_avoidance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shade avoidance","termid":"GO:0009641"}


id: PBO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 11","termid":"PBO:0070454"}


id: PBO:0080796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 3","termid":"PBO:0080796"}


id: MONDO:0022598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly absence of distal phalanges","termid":"MONDO:0022598","xrefs":{"Monarch":{"xref_id":"0022598"}}}


id: GO:0140642
data:
  {"annotated_genes":["SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99582,101799],"is_not":false,"summary":null,"term":"GO:0140642"}]},"cv_name":"biological_process","definition":"The spindle organization process in which the spindle is maintained at a constant length during meiotic metaphase.","definition_xrefs":["PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle assembly","termid":"GO:0090306"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0044085","GO:0140013","GO:0000226"],"is_obsolete":false,"name":"meiotic spindle formation (spindle phase two)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140642","terms_by_termid":{"GO:0140642":null}}


id: GO:0036244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:di","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to neutral pH","termid":"GO:0036244"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: PBO:0078110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor associated transmembrane adaptor 1","termid":"PBO:0078110"}


id: PBO:0049803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 2","termid":"PBO:0049803"}


id: PBO:0030563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phenylalanine_level","termid":"PBO:0030563"}


id: PBO:0072233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 8","termid":"PBO:0072233"}


id: GO:1901939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-exo-alpha-bergamotene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"(-)-exo-alpha-bergamotene metabolic process","termid":"GO:1901938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene catabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene breakdown","type":"exact"},{"name":"(-)-exo-alpha-bergamotene catabolism","type":"exact"},{"name":"(-)-exo-alpha-bergamotene degradation","type":"exact"}],"termid":"GO:1901939"}


id: PBO:0050294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine N-methyltransferase","termid":"PBO:0050294"}


id: GO:0052074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the salicylic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host salicylic acid-mediated defense response (obsolete GO:0052074)","synonyms":[{"name":"activation by symbiont of host salicylic acid-mediated defense response","type":"narrow"},{"name":"induction by organism of host SA-mediated defense response","type":"narrow"},{"name":"induction by organism of host salicylic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of host SA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host salicylic acid-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host salicylic acid-mediated defense response","type":"exact"}],"termid":"GO:0052074"}


id: MOD:00916
data:
  {"annotated_genes":["SJAG_04972","SJAG_02763","SJAG_02592","SJAG_03012"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80893,119857,119913,119858,80894,119915,119912,119914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[80940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-serine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null,"SJAG_04972":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-serine residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"ModSer","type":"exact"}],"termid":"MOD:00916","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null,"MOD:00159":null}}


id: PR:O14232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superkiller viralicidic activity 2-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11752:SF2","OMA:SCHPO00545","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mtr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.16c","secondary_identifiers":["UniProtKB:O14232"],"synonyms":[{"name":"Spom972h-SKIV2L2","type":"exact"}],"termid":"PR:O14232"}


id: PBO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus end tracking protein","termid":"PBO:0001335"}


id: PBO:0064843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12C","termid":"PBO:0064843"}


id: PBO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase (predicted)","termid":"PBO:0002519"}


id: PR:O14141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Maf-like protein YhdE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02236","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein C3G6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.03c","secondary_identifiers":["UniProtKB:O14141"],"synonyms":[{"name":"Spom972h-yhdE","type":"exact"}],"termid":"PR:O14141"}


id: PBO:0079216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 1","termid":"PBO:0079216"}


id: SO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region within the central region of a modular centromere, where the kinetochore is formed.","definition_xrefs":["SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"regional_centromere","termid":"SO:0001795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_central_core","synonyms":[{"name":"regional centromere central core","type":"exact"}],"termid":"SO:0001796"}


id: SO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of GNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"GNA","termid":"SO:0001192"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Glycerol_nucleic_acid"],"synonyms":[{"name":"GNA oligo","type":"exact"},{"name":"glycerol nucleic acid","type":"exact"},{"name":"glycol nucleic acid","type":"exact"}],"termid":"SO:0001193"}


id: MONDO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia (obsolete MONDO:0000134)","termid":"MONDO:0000134","xrefs":{"Monarch":{"xref_id":"0000134"}}}


id: FYPO:0006290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle and during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to hydroxyurea","termid":"FYPO:0002099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during mitotic S phase during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during S phase during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006290"}


id: PATO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Polar polarity is a quality that inheres in a molecular entity when the molecular entity is polar, i.e. does possess an electric dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarity","termid":"PATO:0002186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polar polarity","termid":"PATO:0002187"}


id: PBO:0056494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 2","termid":"PBO:0056494"}


id: PBO:0051462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 10-54","termid":"PBO:0051462"}


id: GO:0009837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fruit ripening process that does not involve a respiratory burst.","definition_xrefs":["ISBN:0521587840","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit ripening, non-climacteric","termid":"GO:0009837"}


id: GO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of norepinephrine or epinephrine in the bloodstream.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine catabolic process","termid":"GO:0042419"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine catabolic process in blood stream","synonyms":[{"name":"noradrenaline-adrenalin catabolic process in blood stream","type":"exact"}],"termid":"GO:0001995"}


id: GO:0070777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-aspartate, the D-enantiomer of the anion of (2R)-2-aminobutanedioic acid  is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"D-aspartate transmembrane transport","termid":"GO:0070777"}


id: PBO:0079714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 1","termid":"PBO:0079714"}


id: PBO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33","termid":"PBO:0039517"}


id: GO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any leukotriene following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolite production involved in inflammatory response","termid":"GO:0002538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukotriene production involved in inflammatory response","synonyms":[{"name":"leukotriene production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002540"}


id: PR:Q9US59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- skb5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.13","synonyms":[{"name":"Spom972h-skb5","type":"exact"}],"termid":"PR:Q9US59"}


id: GO:0065008
data:
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id: MONDO:0024533
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id: GO:0072041
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id: GO:0043457
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id: GO:0050573
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id: PBO:0069701
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id: PBO:0076889
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id: PBO:0090773
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id: PBO:0012280
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id: PBO:0061449
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id: PBO:0048287
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id: PBO:0058354
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id: PBO:0036133
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id: MONDO:0008773
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id: PBO:0064160
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id: PBO:0026892
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id: PBO:0080415
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id: GO:0099080
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id: FYPO:0008309
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id: PBO:0054047
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id: PBO:0036371
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id: PBO:0076400
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id: PBO:0078798
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id: GO:0032560
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id: PR:Q9UTR9
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id: GO:0021766
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id: PR:O13339-2
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id: PBO:0061025
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id: MONDO:0013074
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id: GO:0019436
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id: GO:0047853
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id: PBO:0056766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 17","termid":"PBO:0056766"}


id: MONDO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia totalis","termid":"MONDO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia areata 2","secondary_identifiers":["UMLS:C1853104","MESH:C565186","OMIM:610753","GARD:15496","MEDGEN:343971"],"synonyms":[{"name":"AA2","type":"exact"},{"name":"alopecia areata 2","type":"exact"}],"termid":"MONDO:0012551","xrefs":{"Monarch":{"xref_id":"0012551"}}}


id: GO:0140083
data:
  {"annotated_genes":["SJAG_00475","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107327,112918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061995"}]},"cv_name":"molecular_function","definition":"Facilitating the removal of a protein or protein complex from a DNA molecule driven by ATP hydrolysis. This can be achieved for example by introducing non-canonical DNA structures or generating torque to directly inhibit a protein-DNA binding interaction.","definition_xrefs":["PMID:28552615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00475":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent protein-DNA unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent protein-DNA unloading activity","type":"exact"},{"name":"protein-DNA unloading ATPase activity","type":"exact"}],"termid":"GO:0140083","terms_by_termid":{"GO:0061995":null}}


id: PBO:0082074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5,10-methenyltetrahydrofolate synthetase; involved in folic acid biosynthesis","termid":"PBO:0082074"}


id: MONDO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 77","secondary_identifiers":["UMLS:C5774193","OMIM:619988","MEDGEN:1823966","DOID:0081236"],"synonyms":[{"name":"MRT77","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 77","type":"exact"}],"termid":"MONDO:0031031","xrefs":{"Monarch":{"xref_id":"0031031"}}}


id: GO:1905898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21803450","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"positively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to endoplasmic reticulum stress","synonyms":[{"name":"activation of ER stress response","type":"narrow"},{"name":"activation of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of response to ER stress","type":"narrow"},{"name":"activation of response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress response","type":"exact"},{"name":"positive regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of response to ER stress","type":"exact"},{"name":"up regulation of ER stress response","type":"exact"},{"name":"up regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of response to ER stress","type":"exact"},{"name":"up regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress response","type":"exact"},{"name":"up-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of response to ER stress","type":"exact"},{"name":"up-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress response","type":"exact"},{"name":"upregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of response to ER stress","type":"exact"},{"name":"upregulation of response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1905898"}


id: MONDO:0800484
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[86598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009867"},{"annotations":[86387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008685"}]},"cv_name":"mondo","definition":"A metabolic heart condition characterized by variable cardiac hypertrophy, ventricular pre-excitation, and aberrant glycogen storage in the cardiac tissue due to a pathogenic variant in PRKAG2 that results in a net anabolic effect in cardiac cells.","definition_xrefs":["PMID:29298659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"PRKAG2-related cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PRKAG2 cardiac syndrome","type":"exact"},{"name":"PRKAG2 cardiomyopathy","type":"exact"},{"name":"PRKAG2 syndrome","type":"exact"},{"name":"PRKAG2-related cardiomyopathy","type":"exact"}],"termid":"MONDO:0800484","terms_by_termid":{"MONDO:0008685":null,"MONDO:0009867":null,"MONDO:0010946":null},"xrefs":{"Monarch":{"xref_id":"0800484"}}}


id: PBO:0064314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 3","termid":"PBO:0064314"}


id: PBO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome oxidase biogenesis Cmc1 (predicted)","termid":"PBO:0004056"}


id: MONDO:0005666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete berylliosis (obsolete MONDO:0005666)","termid":"MONDO:0005666","xrefs":{"Monarch":{"xref_id":"0005666"}}}


id: PBO:0057804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3126","termid":"PBO:0057804"}


id: GO:0035124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic caudal fin morphogenesis","termid":"GO:0035124"}


id: MONDO:0019780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation of the external ear and the most extreme form of microtia characterized by the complete absence of the external ear and auditory canal, conductive hearing loss, attention deficit disorders and delayed language development.","definition_xrefs":["Orphanet:93976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia","secondary_identifiers":["MedDRA:10002654","GARD:16835","MEDGEN:152377","ICD9:744.01","SCTID:57436000","UMLS:C0702139","icd11.foundation:2056675356"],"termid":"MONDO:0019780","xrefs":{"Monarch":{"xref_id":"0019780"}}}


id: FYPO:0006398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to leucine starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to leucine starvation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0006398"}


id: PBO:0052255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 2","termid":"PBO:0052255"}


id: GO:0014849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the ureter. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder.","definition_xrefs":["MA:0000378","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle contraction","termid":"GO:0014849"}


id: MONDO:0003652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis in which the composition of the stones is predominantly urate.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis","termid":"MONDO:0008171"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute urate nephropathy","secondary_identifiers":["ICD9:583.9","MEDGEN:574593","DOID:580","NCIT:C123037","ICD9:274.11","UMLS:C0341712","SCTID:236496000","icd11.foundation:1011901523"],"synonyms":[{"name":"uric acid nephrolithiasis","type":"exact"},{"name":"uric acid urolithiasis","type":"exact"}],"termid":"MONDO:0003652","xrefs":{"Monarch":{"xref_id":"0003652"}}}


id: MONDO:0012098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 20 (SCA20) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by cerebellar dysarthria as the initial typical manifestation.","definition_xrefs":["Orphanet:101110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 20","secondary_identifiers":["UMLS:C1837541","DOID:0050971","GARD:9997","MEDGEN:373352","MESH:C537199","SCTID:718771009","OMIM:608687","icd11.foundation:960716995"],"synonyms":[{"name":"SCA20","type":"exact"},{"name":"chromosome 11q12 duplication syndrome, 260-Kb","type":"related"},{"name":"spinocerebellar ataxia 20","type":"related"},{"name":"spinocerebellar ataxia type 20","type":"exact"},{"name":"spinocerebellar ataxia with dysphonia","type":"related"},{"name":"spinocerebellar ataxia with spasmodic cough","type":"related"}],"termid":"MONDO:0012098","xrefs":{"Monarch":{"xref_id":"0012098"}}}


id: FYPO:0001972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a septated cell. Nuclear division, contractile ring formation and constriction, and septum assembly are apparently normal, but the septum does not degrade. Additional rounds of nuclear division and cytokinesis may take place, resulting in the formation of a multiseptate cell.","definition_xrefs":["PMID:12654901","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in septated cell","synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in septated cell during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in septated cell","type":"exact"},{"name":"abnormal septum digestion after cytokinesis resulting in septated cell","type":"exact"},{"name":"boomerang shaped","type":"related"}],"termid":"FYPO:0001972"}


id: PBO:0027733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0027733"}


id: GO:0036041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:12641450","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"long-chain fatty acid binding","synonyms":[{"name":"long chain fatty acid binding","type":"exact"}],"termid":"GO:0036041"}


id: GO:1903947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ventricular cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:nc","PMID:25281747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of action potential","termid":"GO:0045760"},{"relation_name":"is_a","term_name":"regulation of ventricular cardiac muscle cell action potential","termid":"GO:0098911"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle cell contraction","termid":"GO:0106134"},{"relation_name":"positively_regulates","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ventricular cardiac muscle cell action potential","synonyms":[{"name":"activation of ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903947"}


id: PR:Q9US43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- urg2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase urg2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.17c","synonyms":[{"name":"Spom972h-urg2","type":"exact"},{"name":"UMP pyrophosphorylase urg2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase urg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US43"}


id: PBO:0064227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C gamma 1","termid":"PBO:0064227"}


id: GO:0046928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of neurotransmitter secretion","termid":"GO:0046928"}


id: PBO:0061483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 2","termid":"PBO:0061483"}


id: MOD:01557
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01557"}


id: PBO:0004852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6 (predicted)","termid":"PBO:0004852"}


id: GO:0032688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-beta production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type I interferon production","termid":"GO:0032480"},{"relation_name":"is_a","term_name":"regulation of interferon-beta production","termid":"GO:0032648"},{"relation_name":"negatively_regulates","term_name":"interferon-beta production","termid":"GO:0032608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interferon-beta production","secondary_identifiers":["GO:0045358","GO:0035548"],"synonyms":[{"name":"down regulation of interferon-beta production","type":"exact"},{"name":"down-regulation of interferon-beta production","type":"exact"},{"name":"downregulation of interferon-beta production","type":"exact"},{"name":"inhibition of interferon-beta production","type":"narrow"},{"name":"negative regulation of IFN-beta production","type":"exact"},{"name":"negative regulation of interferon-beta biosynthetic process","type":"narrow"},{"name":"negative regulation of interferon-beta secretion","type":"narrow"}],"termid":"GO:0032688"}


id: MONDO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"penis verrucous carcinoma","termid":"MONDO:0003698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-invasive verrucous carcinoma of the penis","secondary_identifiers":["MEDGEN:233765","UMLS:C1334984","NCIT:C27791","DOID:5907"],"synonyms":[{"name":"non-invasive penile verrucous carcinoma","type":"exact"},{"name":"non-invasive verrucous carcinoma of penis","type":"exact"},{"name":"non-invasive verrucous carcinoma of the penis","type":"exact"},{"name":"penis non-invasive verrucous carcinoma","type":"related"}],"termid":"MONDO:0003697","xrefs":{"Monarch":{"xref_id":"0003697"}}}


id: FYPO:0001845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is normal (i.e. indistinguishable from wild type). Kinetochore organization is the assembly, arrangement of constituent parts, or disassembly of kinetochores and their associated proteins.","definition_xrefs":["PomBase:mah","GO:0051383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal kinetochore organization","synonyms":[{"name":"normal kinetochore organisation","type":"exact"},{"name":"normal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"normal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0001845"}


id: PBO:0003604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sed5 (predicted)","termid":"PBO:0003604"}


id: MONDO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of an excessive amount of fat in the stool.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"steatorrhea","secondary_identifiers":["MEDGEN:20948","HP:0002570","DOID:10602","MESH:D045602","NCIT:C86917","SCTID:27868004","UMLS:C0038238"],"synonyms":[{"name":"fatty stool","type":"exact"},{"name":"fatty stool (finding)","type":"exact"},{"name":"steatorrhea","type":"exact"},{"name":"steatorrhea (disease)","type":"exact"}],"termid":"MONDO:0001075","xrefs":{"Monarch":{"xref_id":"0001075"}}}


id: GO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopiperitenone = piperitenone.","definition_xrefs":["RHEA:21516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"isopiperitenone delta-isomerase activity","secondary_identifiers":["MetaCyc:ISOPIPERITENONE-DELTA-ISOMERASE-RXN","EC:5.3.3.11","KEGG_REACTION:R03782"],"synonyms":[{"name":"isopiperitenone D-isomerase activity","type":"exact"},{"name":"isopiperitenone delta8-delta4-isomerase activity","type":"related"}],"termid":"GO:0050008"}


id: PBO:0071483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 24","termid":"PBO:0071483"}


id: PBO:0067789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 91","termid":"PBO:0067789"}


id: GO:0033698
data:
  {"annotated_genes":["SJAG_00441","SJAG_01230","SJAG_04576","SJAG_00868","SJAG_04758","SJAG_03867","SJAG_03230","SJAG_02439","SJAG_02981","SJAG_02846","SJAG_03255","SJAG_00581","SJAG_03441"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76091,76314,76389,77642,79382,80675,89463,95001,103141,105401,107122,109845,114621],"is_not":false,"summary":null,"term":"GO:0033698"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex which deacetylates histones preferentially in promoter regions. Composed of a two copies of catalytic histone deacetylase subunit (S. pombe Clr6/ S. cerevisiae Rpd3p), an Sds-3 family protein (S. pombe /S. cerevisiae Sds3(p) ), two copies of SIN3 family co-repressor (S. pombe Pst1/ S. cerevisiae Sin3p, a WD repeat protein/ histone chaperone (S. pombe Prw1/ S. cerevisiae Ume1p), and a zf- PHD finger ( S. pombe Png2/ S. cerevisiae Pho23p), plus 4 additional subunits, and associated factors.","definition_xrefs":["GOC:vw","PMID:17450151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03867":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005654","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Rpd3L complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000508"],"synonyms":[{"name":"Clr6 histone deacetylase complex I/I'","type":"exact"},{"name":"Clr6L complex","type":"exact"},{"name":"Rpd3C(L)","type":"exact"},{"name":"Sin3L complex","type":"exact"}],"termid":"GO:0033698","terms_by_termid":{"GO:0033698":null}}


id: PBO:0012227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit (predicted)","termid":"PBO:0012227"}


id: PBO:0005014
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ALG11","termid":"PBO:0005014"}


id: MONDO:1012227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, domestic cat","secondary_identifiers":["OMIA:000830-9685"],"termid":"MONDO:1012227","xrefs":{"Monarch":{"xref_id":"1012227"}}}


id: MONDO:0020329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic Hodgkin lymphoma, lymphocyte-rich type (obsolete MONDO:0020329)","termid":"MONDO:0020329","xrefs":{"Monarch":{"xref_id":"0020329"}}}


id: MONDO:0968983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 6","secondary_identifiers":["UMLS:C5935614","OMIM:620796","MEDGEN:1857440"],"termid":"MONDO:0968983","xrefs":{"Monarch":{"xref_id":"0968983"}}}


id: GO:0140835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphothreonine (position 4).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0140096","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain T4 kinase activity","type":"exact"}],"termid":"GO:0140835"}


id: MONDO:1012463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, cattle","secondary_identifiers":["OMIA:001813-9913"],"termid":"MONDO:1012463","xrefs":{"Monarch":{"xref_id":"1012463"}}}


id: MONDO:0020008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare immune system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare immune disease (obsolete MONDO:0020008)","secondary_identifiers":["Orphanet:98004"],"synonyms":[{"name":"rare immune system disease","type":"exact"}],"termid":"MONDO:0020008","xrefs":{"Monarch":{"xref_id":"0020008"}}}


id: PBO:0074856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 44","termid":"PBO:0074856"}


id: GO:0048798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of the swim bladder by trapped gases. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"swim bladder maturation","termid":"GO:0048796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder inflation","synonyms":[{"name":"gas bladder inflation","type":"exact"}],"termid":"GO:0048798"}


id: PBO:0063298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 5","termid":"PBO:0063298"}


id: PR:O94712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1259.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.12c","synonyms":[{"name":"Spom972h-gid1","type":"exact"}],"termid":"PR:O94712"}


id: GO:0140022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A giant secretory organelle that comprises a bulb-shape capsule containing a coiled hollow tubule structure attached to it. A cnida defines the phylum Cnidaria.","definition_xrefs":["Wikipedia:Cnida#Structure_and_function"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cnida","synonyms":[{"name":"cnidae (plural)","type":"exact"}],"termid":"GO:0140022"}


id: PBO:0087936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-3; member of the ABC superfamily; stimulates EF-1 alpha-dependent binding of aminoacyl-tRNA by the ribosome; normally expressed in zinc deficient cells; HEF3 has a paralog, YEF3, that arose from the whole genome duplication","termid":"PBO:0087936"}


id: GO:2000318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"positively_regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 17 type immune response","synonyms":[{"name":"positive regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000318"}


id: PBO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 25","termid":"PBO:0071484"}


id: MONDO:0015127
data:
  {"annotated_genes":["SJAG_02829","SJAG_03698","SJAG_04110","SJAG_03418","SJAG_03597","SJAG_00321","SJAG_04398","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[87311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[86254,86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[87352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"},{"annotations":[85860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[85570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic hypothalamic or pituitary disease (obsolete MONDO:0015968)","termid":"MONDO:0015968"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_00321":null,"SJAG_02829":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"pituitary deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E23.0","icd11.foundation:292840069","Orphanet:101957","GARD:19801"],"termid":"MONDO:0015127","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null,"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0015127"}}}


id: GO:0045133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + O2 = 2-hydroxy-3-(3-oxoprop-1-enyl)but-2-enedioate + H+.","definition_xrefs":["EC:1.13.11.14","RHEA:18477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:1.13.11.14-RXN","KEGG_REACTION:R01507"],"synonyms":[{"name":"2,3-dihydroxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate oxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"2,3-dihydroxybenzoic oxygenase activity","type":"related"},{"name":"o-pyrocatechuate oxygenase activity","type":"related"}],"termid":"GO:0045133"}


id: PBO:0089458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak2","termid":"PBO:0089458"}


id: MONDO:0007267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 3","secondary_identifiers":["OMIM:115196","UMLS:C1861863","DOID:0110309","MEDGEN:349382","MESH:C566170"],"synonyms":[{"name":"CMH3","type":"exact"},{"name":"TPM1 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 3","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 3","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 3","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 3","type":"exact"},{"name":"hypertrophic cardiomyopathy 3","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TPM1","type":"exact"},{"name":"hypertrophic cardiomyopathy type 3","type":"exact"}],"termid":"MONDO:0007267","xrefs":{"Monarch":{"xref_id":"0007267"}}}


id: MONDO:0800491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neonatal/infantile epilepsy syndrome characterized by frequent drug-resistant seizures that begin ≤3 months of age, with abnormal interictal EEG and neurological examination.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile-onset epilepsy syndrome with developmental and epileptic encephalopathy","termid":"MONDO:0800490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"early-infantile DEE","synonyms":[{"name":"EIDEE","type":"exact"},{"name":"early-infantile developmental and epileptic encephalopathy syndrome","type":"exact"}],"termid":"MONDO:0800491","xrefs":{"Monarch":{"xref_id":"0800491"}}}


id: FYPO:0000567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of septum assembly","synonyms":[{"name":"decreased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"decreased duration of division septum assembly","type":"exact"},{"name":"decreased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of septation","type":"broad"},{"name":"decreased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"decreased duration of septum assembly during vegetative growth","type":"exact"},{"name":"decreased septation","type":"related"},{"name":"decreased septum formation","type":"related"},{"name":"reduced duration of septum assembly","type":"exact"},{"name":"septum formation: decreased","type":"broad"}],"termid":"FYPO:0000567"}


id: PBO:0030279
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_rate","termid":"PBO:0030279"}


id: PR:Q9C1W6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.09 gene.","definition_xrefs":["UniProtKB:Q9C1W6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C713.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.09","synonyms":[{"name":"Spom972h-SPBC713.09","type":"exact"}],"termid":"PR:Q9C1W6"}


id: PBO:0076733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 2","termid":"PBO:0076733"}


id: MONDO:0044253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatoglyphics--palmar triradius d, absence of (obsolete MONDO:0044253)","secondary_identifiers":["OMIM:221760"],"synonyms":[{"name":"dermatoglyphics--palmar triradius d, absence of","type":"related"}],"termid":"MONDO:0044253","xrefs":{"Monarch":{"xref_id":"0044253"}}}


id: PBO:0077439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 174","termid":"PBO:0077439"}


id: PBO:0069170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 422, pseudogene","termid":"PBO:0069170"}


id: PBO:0113179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein and plus-end directed microtubule (MT) polymerase; involved in mitotic spindle positioning, nuclear migration, microtubule polymerization and inhibition of MT catastrophe; stabilizes microtubules by targeting Bik1p to the MT plus end; Kip2p levels are controlled during the cell cycle","termid":"PBO:0113179"}


id: GO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly stable complex composed of the ATAC complex and the mediator complex (also called TRAP or MED). MECO binds and regulates the transcription of a subset of non-coding RNAs transcribed by RNA polymerase II.","definition_xrefs":["GOC:hjd","PMID:20508642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MECO complex","synonyms":[{"name":"meta-coactivator complex","type":"exact"}],"termid":"GO:0002929"}


id: PBO:0067117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 162, pseudogene","termid":"PBO:0067117"}


id: PBO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrofolatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0004512"}


id: PBO:0060137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1A","termid":"PBO:0060137"}


id: PBO:0072364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 50","termid":"PBO:0072364"}


id: PBO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37 (predicted)","termid":"PBO:0000881"}


id: PBO:0079764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFD1 antisense RNA 1","termid":"PBO:0079764"}


id: GO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal hypha.","definition_xrefs":["PMID:15976451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"hyphal tip","termid":"GO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"hyphal tip polarisome","termid":"GO:0031562"}


id: GO:0071520
data:
  {"annotated_genes":["SJAG_00938","SJAG_04498","SJAG_02864","SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89683,98386,98643,108512],"is_not":false,"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that occurs in the context of assembling an actomyosin contractile ring during cytokinesis, and that results in the compaction of actin filaments into a tight ring.","definition_xrefs":["GOC:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle convergence","termid":"GO:0090426"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"actomyosin contractile ring assembly actin filament bundle convergence","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament bundle convergence involved in actomyosin contractile ring formation","type":"related"},{"name":"actin filament bundle convergence involved in cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:0071520","terms_by_termid":{"GO:0071520":null}}


id: PBO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin fold protein Plp1 (predicted)","termid":"PBO:0002302"}


id: GO:1903077
data:
  {"annotated_genes":["SJAG_02392","SJAG_03970","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96213],"is_not":false,"summary":null,"term":"GO:1903077"},{"annotations":[88440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[94770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["PMID:11602640","GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1905964","GO:0090005"],"synonyms":[{"name":"down regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down regulation of protein localization in plasma membrane","type":"exact"},{"name":"down regulation of protein localization to plasma membrane","type":"exact"},{"name":"down regulation of protein targeting to plasma membrane","type":"related"},{"name":"down regulation of protein-plasma membrane targeting","type":"related"},{"name":"down-regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization to plasma membrane","type":"exact"},{"name":"down-regulation of protein targeting to plasma membrane","type":"related"},{"name":"down-regulation of protein-plasma membrane targeting","type":"related"},{"name":"downregulation of protein localisation in plasma membrane","type":"exact"},{"name":"downregulation of protein localization in plasma membrane","type":"exact"},{"name":"downregulation of protein localization to plasma membrane","type":"exact"},{"name":"downregulation of protein targeting to plasma membrane","type":"related"},{"name":"downregulation of protein-plasma membrane targeting","type":"related"},{"name":"inhibition of protein localisation in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization to plasma membrane","type":"narrow"},{"name":"inhibition of protein targeting to plasma membrane","type":"narrow"},{"name":"inhibition of protein-plasma membrane targeting","type":"narrow"},{"name":"negative regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"negative regulation of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of protein localization in plasma membrane","type":"exact"},{"name":"negative regulation of protein targeting to plasma membrane","type":"related"},{"name":"negative regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903077","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: PBO:0003693
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SNT309","termid":"PBO:0003693"}


id: PBO:0028997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_amino_acid_import_during_vegetative_growth","termid":"PBO:0028997"}


id: GO:0031600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex located in the cytosol of a cell, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle","termid":"GO:0005838"},{"relation_name":"part_of","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}


id: PBO:0002653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7 (predicted)","termid":"PBO:0002653"}


id: PBO:0047461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 2","termid":"PBO:0047461"}


id: FYPO:0007975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during anaphase B in which the distribution of the positions of interpolar microtubule rescues is abnormal.\\nThe positions of interpolar microtubule rescues are where the transitions from shrinkage to growth occur.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule rescue","termid":"FYPO:0007957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal distribution of interpolar microtubule rescue during anaphase B","termid":"FYPO:0007975"}


id: GO:1990431
data:
  {"annotated_genes":["SJAG_01176","SJAG_02725","SJAG_01836","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71572,88728,118373,118488],"is_not":false,"summary":null,"term":"GO:1990431"}]},"cv_name":"biological_process","definition":"The process of forming the mature 3' end of a priRNA molecule.","definition_xrefs":["PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01836":null,"SJAG_02621":null,"SJAG_02725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"priRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"priRNA 3' end processing","type":"exact"},{"name":"primal small RNA 3'-end processing","type":"exact"}],"termid":"GO:1990431","terms_by_termid":{"GO:1990431":null}}


